View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2739_low_32 (Length: 247)
Name: NF2739_low_32
Description: NF2739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2739_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 10 - 237
Target Start/End: Complemental strand, 48172479 - 48172252
Alignment:
| Q |
10 |
aaaatctagtttcatgggtaaataaactatagcaatctcttttcaatattactttttgtcctatataaaataaaatacaatatgagatgattatggggnn |
109 |
Q |
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| T |
48172479 |
aaaatctagtttcatgggtacacaaactatagcaatctcttttcaacattactttttgtcctatataaaataaaatacaatatgagatgattatggagtt |
48172380 |
T |
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| Q |
110 |
nnnnngtgttttaactctccgattccaacggtaagggcccttggtaatctagagttcagtcggaactctggttaattattgattcaaccaggattctaac |
209 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48172379 |
tttttgtgttttaactctccgattccaacggtaagggcctttggtaatctagagttcagtcggaactctggttaattattgattcaaccaggattctaac |
48172280 |
T |
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| Q |
210 |
ttgtgattcccgaatgatttgcccttaa |
237 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
48172279 |
ttgtgattcccgaatgatttgcccttaa |
48172252 |
T |
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