View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2739_low_43 (Length: 201)
Name: NF2739_low_43
Description: NF2739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2739_low_43 |
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Alignment Details
Target: chr1 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 46838501 - 46838671
Alignment:
| Q |
1 |
ccggtgtaatgtttttatctccataaatttgtgaggttatctatcaatagtgtaacttagagacggatctactctaaagatattggggagagctgacccc |
100 |
Q |
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| T |
46838501 |
ccggtgtaatgcttttatctccataaatttgtgaggttatctatcaatagtgtaacttagagatggatctactctatagatattgaggagagctgacccc |
46838600 |
T |
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| Q |
101 |
acaacttcaatctcttgttaaccaatattatgacattttgatgttataagccccagctcaaatagtattat |
171 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
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| T |
46838601 |
acaacttcaatctcttgttaaccaatattatgatattttgatgttataagccccagctcaaatagtgttat |
46838671 |
T |
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