View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2740_high_9 (Length: 256)

Name: NF2740_high_9
Description: NF2740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2740_high_9
NF2740_high_9
[»] chr7 (43 HSPs)
chr7 (89-206)||(43002542-43002659)
chr7 (88-194)||(982217-982323)
chr7 (132-242)||(42264533-42264638)
chr7 (129-242)||(46536840-46536955)
chr7 (129-242)||(27827474-27827582)
chr7 (129-194)||(28493548-28493613)
chr7 (129-231)||(29993334-29993438)
chr7 (129-194)||(42327430-42327495)
chr7 (129-194)||(6244591-6244656)
chr7 (129-206)||(31226196-31226273)
chr7 (129-194)||(43338378-43338443)
chr7 (129-194)||(48312837-48312902)
chr7 (128-191)||(35648130-35648193)
chr7 (129-242)||(42328296-42328404)
chr7 (129-186)||(46614956-46615013)
chr7 (129-191)||(42327031-42327093)
chr7 (129-191)||(46350122-46350184)
chr7 (129-194)||(43158001-43158066)
chr7 (129-181)||(4061352-4061404)
chr7 (134-231)||(46673370-46673469)
chr7 (129-187)||(31031282-31031340)
chr7 (129-190)||(28957438-28957499)
chr7 (6-54)||(43002458-43002506)
chr7 (129-194)||(36122059-36122124)
chr7 (133-194)||(43154422-43154483)
chr7 (128-181)||(46330378-46330431)
chr7 (100-191)||(47252752-47252844)
chr7 (136-192)||(46535306-46535362)
chr7 (87-150)||(44105334-44105397)
chr7 (129-194)||(9806038-9806104)
chr7 (129-194)||(30583254-30583320)
chr7 (129-231)||(39869421-39869526)
chr7 (129-194)||(40061742-40061808)
chr7 (129-194)||(44819293-44819359)
chr7 (131-192)||(21920221-21920282)
chr7 (129-194)||(34821395-34821459)
chr7 (168-205)||(45221439-45221476)
chr7 (129-192)||(3371039-3371103)
chr7 (168-207)||(43135154-43135193)
chr7 (129-194)||(37657558-37657624)
chr7 (174-207)||(21254053-21254086)
chr7 (198-242)||(44819377-44819421)
chr7 (174-206)||(47585151-47585183)
[»] chr8 (47 HSPs)
chr8 (87-187)||(2772252-2772352)
chr8 (129-242)||(40530214-40530322)
chr8 (129-206)||(22215833-22215910)
chr8 (129-200)||(38745394-38745465)
chr8 (129-225)||(43800065-43800163)
chr8 (129-242)||(14912480-14912602)
chr8 (129-194)||(5838979-5839044)
chr8 (129-194)||(25099532-25099597)
chr8 (129-194)||(35397331-35397396)
chr8 (129-231)||(285178-285275)
chr8 (129-231)||(630602-630699)
chr8 (129-231)||(816414-816511)
chr8 (129-194)||(20696658-20696723)
chr8 (129-191)||(25100871-25100933)
chr8 (129-194)||(17155327-17155392)
chr8 (129-191)||(35159568-35159630)
chr8 (135-242)||(41669588-41669697)
chr8 (129-194)||(5575320-5575385)
chr8 (129-242)||(17123382-17123490)
chr8 (129-181)||(39734744-39734796)
chr8 (129-191)||(3153760-3153820)
chr8 (139-242)||(42353070-42353176)
chr8 (129-194)||(24803951-24804017)
chr8 (134-194)||(32175721-32175781)
chr8 (129-194)||(12209401-12209467)
chr8 (129-194)||(12453829-12453895)
chr8 (129-194)||(18146929-18146995)
chr8 (129-187)||(36859971-36860029)
chr8 (129-242)||(39103574-39103683)
chr8 (129-194)||(40532605-40532671)
chr8 (139-192)||(38760250-38760303)
chr8 (168-207)||(6339041-6339080)
chr8 (168-207)||(17082409-17082448)
chr8 (168-207)||(25024083-25024122)
chr8 (168-207)||(31582451-31582490)
chr8 (129-187)||(45237219-45237278)
chr8 (156-194)||(7303938-7303976)
chr8 (129-242)||(16785738-16785847)
chr8 (129-242)||(16785936-16786045)
chr8 (168-206)||(17082383-17082421)
chr8 (168-206)||(30338287-30338325)
chr8 (132-194)||(34900212-34900274)
chr8 (168-206)||(41314280-41314318)
chr8 (168-206)||(44826735-44826773)
chr8 (133-192)||(42803820-42803880)
chr8 (174-206)||(43276142-43276174)
chr8 (168-200)||(43874610-43874642)
[»] chr4 (56 HSPs)
chr4 (88-187)||(53443691-53443790)
chr4 (129-242)||(6245012-6245127)
chr4 (129-242)||(19801089-19801204)
chr4 (129-194)||(39839438-39839503)
chr4 (129-200)||(33984813-33984884)
chr4 (129-242)||(53284722-53284844)
chr4 (129-194)||(47633165-47633230)
chr4 (129-194)||(49334497-49334562)
chr4 (88-185)||(55494356-55494453)
chr4 (128-194)||(32013107-32013173)
chr4 (129-191)||(44449181-44449243)
chr4 (129-194)||(2942957-2943022)
chr4 (129-190)||(37113672-37113733)
chr4 (129-190)||(55345402-55345463)
chr4 (129-194)||(54999414-54999479)
chr4 (129-191)||(36180681-36180743)
chr4 (129-194)||(43375356-43375422)
chr4 (88-150)||(7140294-7140356)
chr4 (129-192)||(24153279-24153342)
chr4 (135-194)||(40675394-40675453)
chr4 (129-194)||(19802562-19802627)
chr4 (129-190)||(48057972-48058033)
chr4 (137-194)||(55900389-55900446)
chr4 (129-181)||(45559969-45560021)
chr4 (135-190)||(317901-317956)
chr4 (129-194)||(19914162-19914228)
chr4 (87-190)||(20530451-20530564)
chr4 (129-194)||(25697547-25697613)
chr4 (8-54)||(53443604-53443650)
chr4 (136-200)||(7895931-7895996)
chr4 (129-190)||(27536987-27537048)
chr4 (129-190)||(31220674-31220735)
chr4 (128-192)||(31998414-31998479)
chr4 (198-242)||(1771059-1771103)
chr4 (129-192)||(30654091-30654155)
chr4 (87-147)||(52909728-52909788)
chr4 (168-203)||(35842161-35842196)
chr4 (132-191)||(51942488-51942547)
chr4 (198-236)||(2389688-2389726)
chr4 (129-194)||(30410694-30410760)
chr4 (174-208)||(40496797-40496831)
chr4 (129-191)||(43939426-43939488)
chr4 (168-206)||(45906882-45906920)
chr4 (129-191)||(49647868-49647930)
chr4 (168-206)||(51010458-51010496)
chr4 (137-191)||(51941714-51941768)
chr4 (168-206)||(53407903-53407941)
chr4 (129-194)||(2389758-2389823)
chr4 (130-191)||(26188834-26188895)
chr4 (198-231)||(45109040-45109073)
chr4 (6-51)||(52909207-52909252)
chr4 (6-54)||(7140391-7140438)
chr4 (168-204)||(9031384-9031420)
chr4 (135-183)||(30649908-30649956)
chr4 (174-206)||(50503261-50503293)
chr4 (174-202)||(53225047-53225075)
[»] chr1 (44 HSPs)
chr1 (129-242)||(30358795-30358910)
chr1 (129-242)||(45900850-45900972)
chr1 (88-187)||(28344613-28344712)
chr1 (129-242)||(39326327-39326449)
chr1 (129-194)||(3569681-3569746)
chr1 (130-242)||(12769836-12769957)
chr1 (129-194)||(50585520-50585585)
chr1 (129-191)||(11824303-11824365)
chr1 (129-194)||(46311975-46312040)
chr1 (132-200)||(47325874-47325942)
chr1 (129-191)||(36740238-36740300)
chr1 (129-194)||(1189423-1189488)
chr1 (129-181)||(12015411-12015463)
chr1 (100-149)||(11333807-11333856)
chr1 (100-149)||(11491827-11491876)
chr1 (129-190)||(27748318-27748379)
chr1 (88-150)||(31655527-31655589)
chr1 (135-191)||(28954864-28954920)
chr1 (129-191)||(31497219-31497281)
chr1 (156-242)||(42330796-42330877)
chr1 (129-186)||(38624797-38624854)
chr1 (6-54)||(31655624-31655672)
chr1 (129-200)||(2458367-2458438)
chr1 (139-206)||(38814889-38814956)
chr1 (129-194)||(9224429-9224495)
chr1 (129-194)||(31656942-31657008)
chr1 (129-231)||(38059245-38059350)
chr1 (129-242)||(42627633-42627749)
chr1 (168-207)||(1918778-1918817)
chr1 (168-207)||(23710736-23710775)
chr1 (168-207)||(26205029-26205068)
chr1 (168-207)||(29379732-29379771)
chr1 (168-206)||(323596-323634)
chr1 (129-194)||(4513627-4513693)
chr1 (168-206)||(13120966-13121004)
chr1 (129-194)||(18544729-18544795)
chr1 (133-236)||(25366359-25366464)
chr1 (168-206)||(47133908-47133946)
chr1 (129-194)||(18034215-18034280)
chr1 (135-194)||(5699103-5699163)
chr1 (198-242)||(9224513-9224557)
chr1 (174-206)||(26844483-26844515)
chr1 (174-206)||(32367735-32367767)
chr1 (174-206)||(34319297-34319329)
[»] chr2 (34 HSPs)
chr2 (129-242)||(1875236-1875356)
chr2 (129-231)||(7455249-7455353)
chr2 (129-191)||(16495896-16495958)
chr2 (129-194)||(36985944-36986009)
chr2 (129-231)||(38325047-38325151)
chr2 (129-242)||(36935318-36935433)
chr2 (129-229)||(15264761-15264863)
chr2 (129-187)||(18240073-18240131)
chr2 (129-187)||(42520519-42520577)
chr2 (129-194)||(5774811-5774876)
chr2 (129-194)||(10034358-10034423)
chr2 (129-194)||(30524384-30524448)
chr2 (129-200)||(14958824-14958895)
chr2 (129-187)||(34246064-34246122)
chr2 (129-194)||(42097406-42097472)
chr2 (129-181)||(39239898-39239950)
chr2 (129-179)||(8876394-8876444)
chr2 (129-231)||(45377503-45377600)
chr2 (168-206)||(9263706-9263744)
chr2 (168-206)||(9887715-9887753)
chr2 (129-194)||(18109155-18109221)
chr2 (129-242)||(35422607-35422723)
chr2 (129-192)||(7453957-7454021)
chr2 (132-184)||(43569095-43569147)
chr2 (128-194)||(26339453-26339520)
chr2 (168-207)||(28382029-28382068)
chr2 (139-192)||(239973-240027)
chr2 (129-242)||(11447828-11447937)
chr2 (129-191)||(18247413-18247475)
chr2 (168-206)||(43136383-43136421)
chr2 (129-185)||(37241777-37241834)
chr2 (198-242)||(5774908-5774952)
chr2 (174-206)||(10838928-10838960)
chr2 (174-206)||(41796096-41796128)
[»] chr5 (41 HSPs)
chr5 (88-187)||(36944158-36944257)
chr5 (88-164)||(36960205-36960281)
chr5 (133-231)||(22777934-22778034)
chr5 (129-194)||(29524641-29524706)
chr5 (129-194)||(34589200-34589265)
chr5 (128-200)||(42423380-42423452)
chr5 (129-231)||(12282376-12282473)
chr5 (128-190)||(27812334-27812396)
chr5 (129-191)||(36761867-36761929)
chr5 (129-190)||(15499393-15499454)
chr5 (129-206)||(16217613-16217690)
chr5 (129-194)||(37530022-37530087)
chr5 (130-194)||(11783504-11783568)
chr5 (129-194)||(23591385-23591450)
chr5 (129-194)||(35639517-35639582)
chr5 (129-194)||(42710037-42710102)
chr5 (129-242)||(77091-77211)
chr5 (129-187)||(24172089-24172147)
chr5 (129-194)||(6788890-6788955)
chr5 (129-194)||(41733590-41733655)
chr5 (129-242)||(7614269-7614391)
chr5 (129-194)||(7156762-7156828)
chr5 (143-190)||(24464326-24464373)
chr5 (129-169)||(12939071-12939111)
chr5 (129-169)||(12953156-12953196)
chr5 (198-242)||(29524565-29524609)
chr5 (198-242)||(37529946-37529990)
chr5 (139-194)||(41356838-41356894)
chr5 (168-207)||(8023336-8023375)
chr5 (139-242)||(11576170-11576276)
chr5 (129-194)||(7947858-7947924)
chr5 (168-206)||(12362982-12363020)
chr5 (168-206)||(13227928-13227966)
chr5 (129-191)||(15526185-15526247)
chr5 (168-206)||(19955685-19955723)
chr5 (168-206)||(35235920-35235958)
chr5 (174-206)||(2498430-2498462)
chr5 (129-193)||(5102119-5102183)
chr5 (174-206)||(14646742-14646774)
chr5 (198-242)||(15499490-15499534)
chr5 (174-206)||(35235106-35235138)
[»] chr3 (47 HSPs)
chr3 (128-242)||(41990899-41991022)
chr3 (129-231)||(8320712-8320809)
chr3 (129-200)||(1362436-1362507)
chr3 (129-242)||(51063600-51063720)
chr3 (129-194)||(8880120-8880185)
chr3 (129-242)||(30317220-30317328)
chr3 (129-194)||(34435293-34435358)
chr3 (88-187)||(51981543-51981642)
chr3 (128-194)||(2557176-2557242)
chr3 (129-190)||(36238602-36238663)
chr3 (133-242)||(19275807-19275925)
chr3 (129-191)||(30741155-30741217)
chr3 (129-190)||(35406311-35406372)
chr3 (129-242)||(54462688-54462810)
chr3 (129-191)||(52184310-52184372)
chr3 (129-188)||(51761598-51761657)
chr3 (139-242)||(5506584-5506690)
chr3 (135-194)||(6125487-6125546)
chr3 (129-191)||(7042429-7042491)
chr3 (129-194)||(40373953-40374019)
chr3 (129-194)||(46115616-46115682)
chr3 (129-194)||(46116283-46116349)
chr3 (129-191)||(50937576-50937638)
chr3 (129-174)||(17667517-17667562)
chr3 (129-194)||(25998457-25998522)
chr3 (129-242)||(32999059-32999175)
chr3 (198-242)||(34435217-34435261)
chr3 (198-242)||(36659518-36659562)
chr3 (168-207)||(2579391-2579430)
chr3 (168-207)||(19947708-19947747)
chr3 (129-191)||(38732741-38732804)
chr3 (168-207)||(40562727-40562766)
chr3 (129-231)||(46668929-46669027)
chr3 (138-181)||(54598799-54598842)
chr3 (168-206)||(21707842-21707880)
chr3 (168-206)||(29080644-29080682)
chr3 (168-206)||(35500358-35500396)
chr3 (168-206)||(35500384-35500422)
chr3 (129-206)||(36807512-36807590)
chr3 (128-194)||(45355631-45355697)
chr3 (134-191)||(45355817-45355875)
chr3 (168-206)||(50500495-50500533)
chr3 (129-194)||(35555127-35555191)
chr3 (129-192)||(12765207-12765271)
chr3 (174-206)||(38186520-38186552)
chr3 (178-206)||(45369659-45369687)
chr3 (174-206)||(52858653-52858685)
[»] chr6 (20 HSPs)
chr6 (129-242)||(24118444-24118566)
chr6 (129-194)||(18368902-18368967)
chr6 (129-194)||(22708035-22708100)
chr6 (129-206)||(13755598-13755675)
chr6 (129-242)||(32986209-32986317)
chr6 (129-200)||(20646410-20646481)
chr6 (129-194)||(25022264-25022329)
chr6 (129-194)||(12131217-12131282)
chr6 (129-200)||(20526021-20526092)
chr6 (168-242)||(22708114-22708190)
chr6 (98-183)||(32441612-32441697)
chr6 (129-187)||(5957013-5957071)
chr6 (129-194)||(18802295-18802361)
chr6 (129-194)||(32560629-32560694)
chr6 (129-189)||(32561731-32561791)
chr6 (168-207)||(34232272-34232311)
chr6 (129-194)||(4977107-4977173)
chr6 (168-206)||(32732510-32732548)
chr6 (130-194)||(14856213-14856278)
chr6 (135-191)||(21527572-21527628)
[»] scaffold0464 (1 HSPs)
scaffold0464 (132-194)||(5386-5448)
[»] scaffold0330 (1 HSPs)
scaffold0330 (129-194)||(7736-7801)
[»] scaffold0325 (1 HSPs)
scaffold0325 (129-194)||(19090-19155)
[»] scaffold0039 (1 HSPs)
scaffold0039 (135-194)||(76887-76946)
[»] scaffold0418 (1 HSPs)
scaffold0418 (174-208)||(5204-5238)
[»] scaffold0076 (1 HSPs)
scaffold0076 (161-191)||(14154-14184)
[»] scaffold0031 (1 HSPs)
scaffold0031 (168-206)||(129528-129566)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 89 - 206
Target Start/End: Original strand, 43002542 - 43002659
Alignment:
Q  89 aattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctat 188  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43002542 aattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctat 43002641  T
Q  189 cagctaacttatcagcta 206  Q
    |||||| |||||||||||    
T  43002642 cagctagcttatcagcta 43002659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 88 - 194
Target Start/End: Original strand, 982217 - 982323
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||| ||||| || |||||||||||||||||    
T  982217 aaattaaattgtcatgtactttcaagtcattttatatttataacatctaattttaccaaacacattatttttattaagcgagtttttcagctataagcta 982316  T
Q  188 tcagcta 194  Q
    |||||||    
T  982317 tcagcta 982323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 242
Target Start/End: Complemental strand, 42264638 - 42264533
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagcttat 231  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     | |||||||||||| ||||| ||||||||||||||    
T  42264638 agctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcag-----tcatcagctaacttttcagctatcagctagcttat 42264544  T
Q  232 ggcttcttttt 242  Q
     |||| |||||    
T  42264543 agcttattttt 42264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 46536840 - 46536955
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag--ctaacttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||   | |  |||| |||||||||||||| ||||||||     
T  46536840 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagtcatcagctatctgctaacttatcagctatcagctaa 46536939  T
Q  227 cttatggcttcttttt 242  Q
    ||||| |||| |||||    
T  46536940 cttatagcttgttttt 46536955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 27827474 - 27827582
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||     ||||||||| ||| ||||| |||||||||||    
T  27827474 aacagctaattttaccaaacacattatttttaataagcaaacttttcagctataagctaccagc-----tatcagctagcttttcagctatcagctagct 27827568  T
Q  229 tatggcttcttttt 242  Q
    ||| |||| |||||    
T  27827569 tatagcttattttt 27827582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 28493613 - 28493548
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28493613 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 28493548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 29993438 - 29993334
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||  | | |||||||| ||| ||| | |||||||||    
T  29993438 aacagctaattttaccaaagacattatttttaataagcaagcttttcagctataagctatcagctatcagtcatcagctagcttttcaactatcagctag 29993339  T
Q  227 cttat 231  Q
    |||||    
T  29993338 cttat 29993334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 42327495 - 42327430
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42327495 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 42327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 6244591 - 6244656
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  6244591 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagatatcagcta 6244656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 31226273 - 31226196
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  31226273 aacaactaattttaccaaacacattatttttaataagcaaacttttcagctataagctatcagctagcttttcagcta 31226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 43338378 - 43338443
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43338378 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 43338443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 48312902 - 48312837
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  48312902 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctattagcta 48312837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 35648130 - 35648193
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  35648130 taacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcag 35648193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 42328404 - 42328296
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||     | ||||| ||| ||||| |||||||||||    
T  42328404 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctatcagccatcagcta-----taagctagcttttcagctatcagctagct 42328310  T
Q  229 tatggcttcttttt 242  Q
    ||| |||| |||||    
T  42328309 tatagctttttttt 42328296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 46615013 - 46614956
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagct 186  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  46615013 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagct 46614956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 42327093 - 42327031
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  42327093 aacagttaattttatcaaacacattatttttaataagcaagcttttcagctataagctatcag 42327031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 46350184 - 46350122
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||    
T  46350184 aacagctaattttatcaaacacattatttttaataagcaggcttttcagctataagctatcag 46350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 43158001 - 43158066
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||    
T  43158001 aacaactaattttaccaaacacattatttttaataagcaagctttttagctataagttatcagcta 43158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 4061352 - 4061404
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4061352 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctat 4061404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 46673370 - 46673469
Alignment:
Q  134 ctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctagcttat 231  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||| |||  | | |||||||| ||| ||||| | ||||||||||||    
T  46673370 ctaattttaccaaacacattatttttaataagcaagcttttcaactataatctatcaactatcagtcatcagctagcttttcagctaacagctagcttat 46673469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 31031340 - 31031282
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  31031340 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctatcagcta 31031282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 28957499 - 28957438
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  28957499 aacaactaattttaccaaacacattatttttaataagcaagtttttcagctataaactatca 28957438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 43002458 - 43002506
Alignment:
Q  6 agacaatacttgattttaataggttttgatgaatattcattttcaaagg 54  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43002458 agacaatacttgattttcataggttttgatgaatattcattttcaaagg 43002506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 36122059 - 36122124
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  || ||||||||| | || ||||||||||||||||||||||||    
T  36122059 aacagctaattttaccaaacactttaattttaataaactagtttttcagctataagctatcagcta 36122124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 43154483 - 43154422
Alignment:
Q  133 gctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||    
T  43154483 gctagttttaccaaacacattatttttaataagcgagcttttcaactataagttatcagcta 43154422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 46330378 - 46330431
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    |||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  46330378 taacagttaattttaccaaacacattaattttaataagcaagcttttcagctat 46330431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 47252752 - 47252844
Alignment:
Q  100 catgtacttttaggtcattttatatttataa-cagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||| |||||| ||||||||||| |||| | || ||||||||||| |||||| |||||||||||| | | ||||||| ||||||||||||||    
T  47252752 catgtccttttatgtcattttatacttatcagcaactaattttaccgaacacattatttttaataaacgaacttttcaactataagctatcag 47252844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 46535306 - 46535362
Alignment:
Q  136 aattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagc 192  Q
    |||||||| ||||||| |||||||||| ||| |||||||| ||||||||||||||||    
T  46535306 aattttactaaacacattatttttaattagcgagcttttcggctataagctatcagc 46535362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 44105334 - 44105397
Alignment:
Q  87 aaaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacac 150  Q
    ||||||||||  |||||||||||||  | ||| |||||||||||||||||| ||||||||||||    
T  44105334 aaaattaaattatcatgtacttttatattattctatatttataacagctaaatttaccaaacac 44105397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 9806104 - 9806038
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  9806104 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 9806038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 30583254 - 30583320
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  30583254 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 30583320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 39869526 - 39869421
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagcta 225  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||  | |  ||| ||||| ||| ||||| ||||||||    
T  39869526 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagccatcagctataagctagcttttcagctatcagcta 39869427  T
Q  226 gcttat 231  Q
    ||||||    
T  39869426 gcttat 39869421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 40061742 - 40061808
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  40061742 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 40061808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 44819293 - 44819359
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||||||| | |||||||||| ||||||||||||||    
T  44819293 aacagctaattttaccaaacactttttattttaataagctaacttttcagctgtaagctatcagcta 44819359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 21920282 - 21920221
Alignment:
Q  131 cagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagc 192  Q
    ||||||||||||||||||||  || ||||||||||  | |||||||||||| ||||||||||    
T  21920282 cagctaattttaccaaacactttaattttaataagttaacttttcagctatcagctatcagc 21920221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 34821459 - 34821395
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||| |||  ||||||||| |||||||||| ||||||    
T  34821459 aacaactaattttaccaaacacattatttttaaaaagtgagcttttca-ctataagctaccagcta 34821395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 45221476 - 45221439
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagct 205  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  45221476 agcttatcagctataagctatcagctaacttatcagct 45221439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 3371039 - 3371103
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagc 192  Q
    |||| |||||||||||||||||  | | ||||||||||| | |||||||||||||||||||||||    
T  3371039 aacaactaattttaccaaacactttttattttaataagctaacttttcagctataagctatcagc 3371103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 43135154 - 43135193
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  43135154 agcttatcagctaaaagctatcagctaacttatcagctaa 43135193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 37657624 - 37657558
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||| ||||||||    
T  37657624 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagccatcagcta 37657558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 21254086 - 21254053
Alignment:
Q  174 tcagctataagctatcagctaacttatcagctaa 207  Q
    ||||||||||||||||||||| ||||||||||||    
T  21254086 tcagctataagctatcagctagcttatcagctaa 21254053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 44819377 - 44819421
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||| ||||||||| | |||||||||||| ||||||||||    
T  44819377 tatcagctagcttatcagctaccagctagcttatagcttcttttt 44819421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 47585151 - 47585183
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||||||||||||||||| |||||||||||    
T  47585151 tcagctataagctatcagctagcttatcagcta 47585183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 2772352 - 2772252
Alignment:
Q  87 aaaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagct 186  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  2772352 aaaattaaattgtcatgtacttttaggtcattttatatttataacagctagttttaccaaacacattatttttaataagcgagcttttcagctatcagct 2772253  T
Q  187 a 187  Q
    |    
T  2772252 a 2772252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 40530214 - 40530322
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||| ||| ||||| |||||||||||    
T  40530214 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagc-----tatcagctagcttttcagctatcagctagct 40530308  T
Q  229 tatggcttcttttt 242  Q
    ||| ||||||||||    
T  40530309 tatagcttcttttt 40530322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 22215833 - 22215910
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  22215833 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataaactatcagctaacttttcagcta 22215910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 38745465 - 38745394
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  38745465 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctagcttat 38745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 43800163 - 43800065
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagcta 225  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||| ||||| ||||||||    
T  43800163 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctaccagctatcagctagcttttcagctatcagcta 43800065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 14912480 - 14912602
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||         |  ||||||||||||| ||||| ||    
T  14912480 aacagctaattttaccaaacacattatttttaataagcaagcttttcaactataagctatcagctatcagtcatcagctatcagctaacttttcagctat 14912579  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| |||| |||||    
T  14912580 cagctagcttatagcttattttt 14912602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 5838979 - 5839044
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  5838979 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagttatcagcta 5839044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 25099597 - 25099532
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  25099597 aacagctaattttaccaaacacattatttttaataaacaagcttttcagctataagctatcagcta 25099532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 35397396 - 35397331
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  35397396 aacagctaattttaccaaacacattatttttaataagcaagcttttcaactataagctatcagcta 35397331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 285178 - 285275
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||     ||||||||| ||||||||| |||||||||||    
T  285178 aacagctcattttaccaaacacaatatttttaataagcaaacttttcagctataagtcatcagc-----tatcagctagcttatcagctatcagctagct 285272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 630699 - 630602
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||     ||||||||| ||||||||| |||||||||||    
T  630699 aacagctcattttaccaaacacaatatttttaataagcaaacttttcagctataagtcatcagc-----tatcagctagcttatcagctatcagctagct 630605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 816511 - 816414
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||  ||||||     ||||||||| ||||||||| |||||||||||    
T  816511 aacagctcattttaccaaacacaatatttttaataagcaaacttttcagctataagtcatcagc-----tatcagctagcttatcagctatcagctagct 816417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 20696723 - 20696658
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||    
T  20696723 aacagctaattttaccaaacacattatttttaataaccaagcttttcagatataagctatcagcta 20696658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 25100871 - 25100933
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  25100871 aacaactaattttaccaaacacgttatttttaataagcaagcttttcagctataagctatcag 25100933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 17155392 - 17155327
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||    
T  17155392 aacagctaattataccaaacccattatttttaataagcaagcttttcagctataagttatcagcta 17155327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 35159630 - 35159568
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  35159630 aacaactaattttaccaaacacattatttttaataagcaagcttttcagttataagttatcag 35159568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 242
Target Start/End: Original strand, 41669588 - 41669697
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag--ctaacttatcagctaacttatcagccatcagctagcttatg 232  Q
    ||||||||||||||||| |||||||||||||| || |||||| ||||||||||||||   | |  ||| ||||| ||| ||||| ||||||||||||||     
T  41669588 taattttaccaaacacattatttttaataagcgagtttttcaactataagctatcagtcatcagctataagctagcttttcagctatcagctagcttata 41669687  T
Q  233 gcttcttttt 242  Q
    ||||||||||    
T  41669688 gcttcttttt 41669697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 5575320 - 5575385
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||| ||||||| |||||||||    
T  5575320 aacagctaattttaccaaacatattatttttaataagcaaacttttcaactataagttatcagcta 5575385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 17123382 - 17123490
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||  ||||||     ||||||||| ||| ||||| || ||||||||    
T  17123382 aacaactaattttaccaaacacattatttttaataagcaaacttttcagctatcagtcatcagc-----tatcagctagcttttcagctatgagctagct 17123476  T
Q  229 tatggcttcttttt 242  Q
    ||| |||| |||||    
T  17123477 tatagcttattttt 17123490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 39734744 - 39734796
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  39734744 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctat 39734796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 3153820 - 3153760
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  3153820 aacagctaattttaccaaacacatta-ttttaataagcaagcttttcagcta-aagctatcag 3153760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 42353176 - 42353070
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagc-ttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagctagcttatggct 235  Q
    ||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||  | |  ||| ||||| ||| ||||| |||||||||||||| |||    
T  42353176 tttaccaaacacattaattttaataagcgagctttttcagctataagctatcagccatcagctataagctagcttttcagctatcagctagcttatagct 42353077  T
Q  236 tcttttt 242  Q
    | |||||    
T  42353076 tattttt 42353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 24804017 - 24803951
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||||||| | |||||||||||||||||||||||||    
T  24804017 aacagctaattttaccaaacactttttattttaataagctaacttttcagctataagctatcagcta 24803951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 32175721 - 32175781
Alignment:
Q  134 ctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||  || ||| ||| ||||||||||||||||||||||||| |||||    
T  32175721 ctaattttaccaaacactttaatttaaatcagcaagcttttcagctataagctataagcta 32175781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 12209401 - 12209467
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  12209401 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 12209467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 12453829 - 12453895
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  12453829 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 12453895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 18146929 - 18146995
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  18146929 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 18146995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 36859971 - 36860029
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||| ||||||||||||||||| |||||||||||| |||| |||||| |||| |||||    
T  36859971 aacagttaattttaccaaacacattatttttaataaacaagtttttcaactatcagcta 36860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 39103683 - 39103574
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagc 227  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||| ||| ||||||||     | ||||||||| ||||| ||||||||||    
T  39103683 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctatcagccatcagcta-----taagctaacttttcagctatcagctagc 39103589  T
Q  228 ttatggcttcttttt 242  Q
    |||| |||| |||||    
T  39103588 ttatagctttttttt 39103574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 40532605 - 40532671
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  40532605 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 40532671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 38760303 - 38760250
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagcttttcagctataagctatcagc 192  Q
    |||||||||| || || ||||||||||| || ||||||||||||||||||||||    
T  38760303 tttaccaaacgcattaattttaataagcgagtttttcagctataagctatcagc 38760250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 6339041 - 6339080
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  6339041 agcttatcagctataagctatcagctagcttatcagctaa 6339080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 17082409 - 17082448
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  17082409 agcttatcagctataagctatcagctagcttatcagctaa 17082448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 25024083 - 25024122
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  25024083 agcttatcagctataagctatcagctagcttatcagctaa 25024122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 31582451 - 31582490
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  31582451 agcttatcagctataagctatcagctagcttatcagctaa 31582490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 45237278 - 45237219
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||||||||||||||||  | | ||||||||||  ||||||||||||||||||||    
T  45237278 aacagctaattttaccaaacacttttaattttaataagttagcttttcagctataagcta 45237219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 7303938 - 7303976
Alignment:
Q  156 ttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  7303938 ttttaataagctaacttttcagctataagctatcagcta 7303976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 16785847 - 16785738
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagc 227  Q
    |||| |||||||||||||||||  | | ||||||||||| | |||||||||||| ||| |||||     ||| |||||| ||| ||||| || |||||||    
T  16785847 aacaactaattttaccaaacactttttattttaataagctaacttttcagctatcagccatcag-----ttaccagctagcttttcagctattagctagc 16785753  T
Q  228 ttatggcttcttttt 242  Q
    |||| ||||||||||    
T  16785752 ttatagcttcttttt 16785738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 16786045 - 16785936
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagc 227  Q
    |||| |||||||||||||||||  | | ||||||||||| | |||||||||||| ||| |||||     ||| |||||| ||| ||||| || |||||||    
T  16786045 aacaactaattttaccaaacactttttattttaataagctaacttttcagctatcagccatcag-----ttaccagctagcttttcagctattagctagc 16785951  T
Q  228 ttatggcttcttttt 242  Q
    |||| ||||||||||    
T  16785950 ttatagcttcttttt 16785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 17082383 - 17082421
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  17082383 agcttatcagctataagctatcagctagcttatcagcta 17082421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 30338287 - 30338325
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  30338287 agcttatcagctaaaagctatcagctaacttatcagcta 30338325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 34900274 - 34900212
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||||| || ||| ||  ||  |||||||||||||||| ||||||||||    
T  34900274 agctaattttaccaaacacattaatttcaaacagttagcttttcagctataaactatcagcta 34900212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 41314280 - 41314318
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  41314280 agcttatcagctaaaagctatcagctaacttatcagcta 41314318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 44826773 - 44826735
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  44826773 agcttatcagctaaaagctatcagctaacttatcagcta 44826735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Original strand, 42803820 - 42803880
Alignment:
Q  133 gctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagc 192  Q
    ||||||||||||||||||  | | ||||||||||| | |||||||||||||| ||||||||    
T  42803820 gctaattttaccaaacactttttattttaataagctaacttttcagctataaactatcagc 42803880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 43276174 - 43276142
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  43276174 tcagctaaaagctatcagctaacttatcagcta 43276142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 43874610 - 43874642
Alignment:
Q  168 agcttttcagctataagctatcagctaacttat 200  Q
    |||||||||||||| ||||||||||||||||||    
T  43874610 agcttttcagctatcagctatcagctaacttat 43874642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 53443691 - 53443790
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||    
T  53443691 aaattaaatagtcatgtacttttaggtcattttatatatataacaactaattttatcaaacacactatttttaataagcaagtttttcagctatcagcta 53443790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 6245012 - 6245127
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  |  ||||||||| ||| ||||| |||||||||    
T  6245012 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcagctactagctatcagctagcttttcagctatcagctag 6245111  T
Q  227 cttatggcttcttttt 242  Q
    ||||||||||||||||    
T  6245112 cttatggcttcttttt 6245127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 19801204 - 19801089
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||| ||||| |||||||||    
T  19801204 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctatcagctatcagctagcttttcagctatcagctag 19801105  T
Q  227 cttatggcttcttttt 242  Q
    ||||| ||||||||||    
T  19801104 cttatagcttcttttt 19801089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 39839503 - 39839438
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39839503 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 39839438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 33984813 - 33984884
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33984813 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatccgctagcttat 33984884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 53284722 - 53284844
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         |  ||||||||| ||| ||||| ||    
T  53284722 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctatcagctaccagctatcagctagcttttcagctat 53284821  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| ||||||||||    
T  53284822 cagctagcttatagcttcttttt 53284844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 47633230 - 47633165
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  47633230 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctgtcagcta 47633165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 49334562 - 49334497
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  49334562 aacagctaattttaccaaacacattatttttaataagcaaacttttcagctataagctatcagcta 49334497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 185
Target Start/End: Complemental strand, 55494453 - 55494356
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagc 185  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| |||| ||| ||||||||||||   | ||||||||||||||||    
T  55494453 aaattaaattgtcatgtacttttaggtcattttatatttataacaactaatcttatcaaatacattatttttaataaatgaacttttcagctataagc 55494356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 32013107 - 32013173
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  32013107 taacaactaattttaccaaacacattatttttaataagcaagcttttcagctataaactatcagcta 32013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 44449181 - 44449243
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  44449181 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctatcagctatcag 44449243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 2943022 - 2942957
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  2943022 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctgtaagctatcagcta 2942957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 37113733 - 37113672
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37113733 aacatctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatca 37113672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 55345402 - 55345463
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  55345402 aacagctaattttaccaaacacattatttttaataagcaagattttcagctataagctatca 55345463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 54999479 - 54999414
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  54999479 aacaactaattttaccaaacacattatttttaataagcaagtttttcagctataagatatcagcta 54999414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 36180743 - 36180681
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||    
T  36180743 aacaactaattttaccaaacacattatttttaataagcaaacttttcagctataaactatcag 36180681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 43375356 - 43375422
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagct-ataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  43375356 aacaactaattttaccaaacacattatttttaataagcaagtttttcagctaataagctatcagcta 43375422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 7140356 - 7140294
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacac 150  Q
    |||| |||| |||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  7140356 aaataaaattgtcatgtacttttaagtcattttatatttataagagctaaatttaccaaacac 7140294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 24153279 - 24153342
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagc 192  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||||| |||| ||||||||||    
T  24153279 aacagctaattttaccaaacactttaattttaataagctagcttttcaactatcagctatcagc 24153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 40675394 - 40675453
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||| || ||||||||||    
T  40675394 taattttaccaaacacattatttttaataagcaagtttttcaactacaaactatcagcta 40675453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19802562 - 19802627
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||| ||| ||||||||||||| ||||||||||||| |||  |||||||||    
T  19802562 aacaactaattttaccaaagacattatttttaataagtaagcttttcagctttaaaatatcagcta 19802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 48058033 - 48057972
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||| |||||||| |||||||| ||||||||||||||||  |||| |||||||||||||||    
T  48058033 aacagttaattttatcaaacacattatttttaataagcaaattttttagctataagctatca 48057972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 55900446 - 55900389
Alignment:
Q  137 attttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||| |||||||||||||  |  ||||||||||||||||||||||||    
T  55900446 attttaccaaacacattatttttaataagtgaatttttcagctataagctatcagcta 55900389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 45560021 - 45559969
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||| ||||    
T  45560021 aacaactaattttaccaaacacattatttttaataagtaagcttttcaactat 45559969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 317956 - 317901
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    |||||||| |||||||| |||||||||||||  || ||||||||||||||||||||    
T  317956 taattttatcaaacacattatttttaataagtgagtttttcagctataagctatca 317901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19914162 - 19914228
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  19914162 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 19914228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 20530564 - 20530451
Alignment:
Q  87 aaaattaaatagtcatgtacttttaggtcattttatatttat----------aacagctaattttaccaaacacactatttttaataagcaagcttttca 176  Q
    ||||||||| |  ||||| |||||||||||||||||||||||          ||| ||||||||||||||||||  || ||||||||||| || ||||||    
T  20530564 aaaattaaacaaacatgttcttttaggtcattttatatttattagtcacttcaaccgctaattttaccaaacactttaattttaataagctagtttttca 20530465  T
Q  177 gctataagctatca 190  Q
     |||||||||||||    
T  20530464 actataagctatca 20530451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 25697547 - 25697613
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||||| | | |||||||||||||||||||||||||    
T  25697547 aacagctaattttaccaaacactttttattttaataaactaacttttcagctataagctatcagcta 25697613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 53443604 - 53443650
Alignment:
Q  8 acaatacttgattttaataggttttgatgaatattcattttcaaagg 54  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||    
T  53443604 acaatacttaactttcataggttttgatgaatattcattttcaaagg 53443650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 7895996 - 7895931
Alignment:
Q  136 aattttaccaaacacactatttttaataagcaagc-ttttcagctataagctatcagctaacttat 200  Q
    |||||||||||||||| || ||||||||||||| | |||||| ||||||| ||||||||| |||||    
T  7895996 aattttaccaaacacaataattttaataagcaaactttttcaactataagttatcagctagcttat 7895931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 27536987 - 27537048
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||| ||||||||||||||| | ||||||||||| || || |||||||||||||| |||||    
T  27536987 aacagttaattttaccaaacagattatttttaatatgcgagtttttcagctataagatatca 27537048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 31220674 - 31220735
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    |||| |||||||||||||||| | |||||||||||||| || |||||| ||||||| |||||    
T  31220674 aacaactaattttaccaaacatattatttttaataagcgagtttttcaactataagttatca 31220735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 31998414 - 31998479
Alignment:
Q  128 taacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagc 192  Q
    |||||||||||||||||||||||  | | ||||||||||| | |||||||||||| ||||||||||    
T  31998414 taacagctaattttaccaaacacttttaattttaataagccaacttttcagctatcagctatcagc 31998479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 1771103 - 1771059
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||    
T  1771103 tatcagctaacttatcagctatcagctagcttatagctttttttt 1771059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 30654091 - 30654155
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagc 192  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||    
T  30654091 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagc 30654155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 52909728 - 52909788
Alignment:
Q  87 aaaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaa 147  Q
    ||||||||||  ||||||| |||||| ||||||||||||||||| |||||| |||| ||||    
T  52909728 aaaattaaattatcatgtaattttagatcattttatatttataaaagctaaatttatcaaa 52909788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 203
Target Start/End: Complemental strand, 35842196 - 35842161
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcag 203  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35842196 agcttatcagctataagctatcagctaacttatcag 35842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 51942488 - 51942547
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||||||||   | ||||||||| | | ||||||||||||||||||||||    
T  51942488 agctaattttaccaaacacttcaattttaataaaccatcttttcagctataagctatcag 51942547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 2389726 - 2389688
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggctt 236  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2389726 tatcagctaacttatcagctatcagctagcttatagctt 2389688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 30410760 - 30410694
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | ||||||||||||||| |||||||||    
T  30410760 aacagctaattttaccaaacacttttaattttaattagctaacttttcagctataagttatcagcta 30410694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 40496831 - 40496797
Alignment:
Q  174 tcagctataagctatcagctaacttatcagctaac 208  Q
    ||||||||||||||||||||| |||||||||||||    
T  40496831 tcagctataagctatcagctagcttatcagctaac 40496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 43939488 - 43939426
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||   | ||||||||| | | ||||||||||||||||||||||    
T  43939488 aacaactaattttaccaaacacttcaattttaataaaccatcttttcagctataagctatcag 43939426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 45906882 - 45906920
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  45906882 agcttatcagctataagctatcagctagcttatcagcta 45906920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 49647930 - 49647868
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||   | ||||||||| | | ||||||| ||||||||||||||    
T  49647930 aacagctaattttaccaaacacttcaattttaataaaccatcttttcatctataagctatcag 49647868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 51010496 - 51010458
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  51010496 agcttatcagctataagctatcagctagcttatcagcta 51010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 51941714 - 51941768
Alignment:
Q  137 attttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||| || ||||||||||| |  |||||| ||||||||||||||    
T  51941714 attttaccaaacacattacttttaataagcgaatttttcaactataagctatcag 51941768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 53407903 - 53407941
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  53407903 agcttatcagctataagctatcagctagcttatcagcta 53407941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 2389823 - 2389758
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||  || ||| ||| ||| | ||||||||||||||||| |||||||    
T  2389823 aacaactaattttaccaaacactttaatttcaatcagctaacttttcagctataagctttcagcta 2389758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 191
Target Start/End: Complemental strand, 26188895 - 26188834
Alignment:
Q  130 acagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||||||||||   | || ||||||   ||||||||||||||||||||||||    
T  26188895 acagctaattttaccaaacacttcaattataataaatcagcttttcagctataagctatcag 26188834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 45109073 - 45109040
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttat 231  Q
    ||||||||||||||||||| ||||||||||||||    
T  45109073 tatcagctaacttatcagctatcagctagcttat 45109040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 52909207 - 52909252
Alignment:
Q  6 agacaatacttgattttaataggttttgatgaatattcattttcaa 51  Q
    ||||||||| ||| ||| ||||||||||||||||||| ||||||||    
T  52909207 agacaatacgtgactttcataggttttgatgaatatttattttcaa 52909252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 7140438 - 7140391
Alignment:
Q  6 agacaatacttgattttaataggttttgatgaatattcattttcaaagg 54  Q
    ||||||||| ||| ||| ||||||||||||||||||| |||||||||||    
T  7140438 agacaatacgtgactttcataggttttgatgaatatt-attttcaaagg 7140391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 9031420 - 9031384
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagc 204  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  9031420 agcttatcagctataagctatcagctagcttatcagc 9031384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 30649956 - 30649908
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataa 183  Q
    |||||||| |||| ||| ||||||||||||| ||| |||||||||||||    
T  30649956 taattttatcaaatacattatttttaataagaaagtttttcagctataa 30649908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 50503261 - 50503293
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||||||||||||||||| |||||||||||    
T  50503261 tcagctataagctatcagctagcttatcagcta 50503293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 53225047 - 53225075
Alignment:
Q  174 tcagctataagctatcagctaacttatca 202  Q
    |||||||||||||||||||||||||||||    
T  53225047 tcagctataagctatcagctaacttatca 53225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 30358795 - 30358910
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||| ||||| |||||||||    
T  30358795 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctaccagctatcagctagcttttcagctatcagctag 30358894  T
Q  227 cttatggcttcttttt 242  Q
    ||||| ||||||||||    
T  30358895 cttatagcttcttttt 30358910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 45900850 - 45900972
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         | |||||||||| ||| ||||| ||    
T  45900850 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctatcagctaccagttatcagctagcttttcagctat 45900949  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| ||||||||||    
T  45900950 cagctagcttatagcttcttttt 45900972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 28344613 - 28344712
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||   |||||||||||||| |||||    
T  28344613 aaattaaattgtcatatacttttaagtcattttatatttataacagttaattttaccaaacacattatttttaataaaagagcttttcagctatcagcta 28344712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 39326327 - 39326449
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||         |  ||||||||| ||| ||||| ||    
T  39326327 aacagctaattttaccaaacacattatttttaataaacaagcttttcagctataagctatcagctatcagctaccagctatcagctagcttttcagctat 39326426  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| ||||||||||    
T  39326427 cagctagcttatagcttcttttt 39326449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 3569746 - 3569681
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3569746 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 3569681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 12769957 - 12769836
Alignment:
Q  130 acagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccatc 220  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||         |  ||||||||||||| ||||| |||    
T  12769957 acagctaattttaccaaacacattatttttaataagcaatcttttcagctataagctatcagctattagtcatcaactatcagctaacttttcagctatc 12769858  T
Q  221 agctagcttatggcttcttttt 242  Q
    ||||||||||| |||| |||||    
T  12769857 agctagcttatagcttattttt 12769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 50585585 - 50585520
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  50585585 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctataagcta 50585520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 11824303 - 11824365
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11824303 aacatctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcag 11824365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 46312040 - 46311975
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||    
T  46312040 aacagctaattttaccaaacatattatttttaataagcaagcttttcagctataagctatctgcta 46311975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 47325942 - 47325874
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||||    
T  47325942 agctaattttaccaaacacattatttttaataagcaagcttttcaactatcagctatcagctagcttat 47325874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 36740238 - 36740300
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||    
T  36740238 aacagctaattttatcaaacacattatttttaataagcaagtttttcagctataagctatcag 36740300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 1189488 - 1189423
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||    
T  1189488 aacaactaattttaccaaacacattatttttactaagcaaacttttcagctataagctatcagcta 1189423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 181
Target Start/End: Original strand, 12015411 - 12015463
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12015411 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctat 12015463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 11333807 - 11333856
Alignment:
Q  100 catgtacttttaggtcattttatatttataacagctaattttaccaaaca 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11333807 catgtacttttaggtcattttatatttataacagctaaatttaccaaaca 11333856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 11491827 - 11491876
Alignment:
Q  100 catgtacttttaggtcattttatatttataacagctaattttaccaaaca 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11491827 catgtacttttaggtcattttatatttataacagctaaatttaccaaaca 11491876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 27748318 - 27748379
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||    
T  27748318 aacagctaattttaccaaatacattatttttaataagcaaggttttcagctataaactatca 27748379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 31655589 - 31655527
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacac 150  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  31655589 aaataaaattgtcatgtaattttaggtcattttatatttataacagttaaatttaccaaacac 31655527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 191
Target Start/End: Complemental strand, 28954920 - 28954864
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||    
T  28954920 taattttaccaaacacattatttttaataaacaagcttttcaactatcagctatcag 28954864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 31497219 - 31497281
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| ||||||||| |||||||| |||||||||||||  || |||||||||||||||||||||    
T  31497219 aacaactaattttatcaaacacattatttttaataagtgagtttttcagctataagctatcag 31497281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 42330796 - 42330877
Alignment:
Q  156 ttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||||| | |||||||||||||||| ||||||||     ||||||| ||||||||| | |||||||||||| ||||||||||    
T  42330796 ttttaataagctaacttttcagctataagccatcagcta-----tcagctagcttatcagctaccagctagcttatagcttcttttt 42330877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 38624797 - 38624854
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagct 186  Q
    |||| ||||||||| |||||||| |||||||||||||||| ||||||| |||||||||    
T  38624797 aacaactaattttatcaaacacattatttttaataagcaaacttttcaactataagct 38624854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31655672 - 31655624
Alignment:
Q  6 agacaatacttgattttaataggttttgatgaatattcattttcaaagg 54  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  31655672 agacaatacgtgattttcataggttttgatgaatatttattttcaaagg 31655624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 2458438 - 2458367
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    |||| |||||||||||||||||| |||||||||| ||| ||||||||||  || ||||||||| || |||||    
T  2458438 aacaactaattttaccaaacacattatttttaattagcgagcttttcagtcatcagctatcagttagcttat 2458367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 206
Target Start/End: Complemental strand, 38814956 - 38814889
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    |||| |||| ||| ||||||||||||||||||||||||  ||||||||||||| || ||| |||||||    
T  38814956 tttatcaaatacattatttttaataagcaagcttttcaattataagctatcagttagcttttcagcta 38814889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 9224429 - 9224495
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  9224429 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 9224495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 31656942 - 31657008
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  31656942 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 31657008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 38059245 - 38059350
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaag-cttttcagctataagctatcag--ctaacttatcagctaacttatcagccatcagcta 225  Q
    |||| |||||||||||||||||| |||||||||||| | ||  ||||||||||||| |||||||   | | |||||||||| ||| ||||| ||||| ||    
T  38059245 aacaactaattttaccaaacacattatttttaataaacgagttttttcagctataaactatcagtcatcagttatcagctagcttttcagctatcagtta 38059344  T
Q  226 gcttat 231  Q
    ||||||    
T  38059345 gcttat 38059350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 42627749 - 42627633
Alignment:
Q  129 aacagctaattttaccaaacac-actatttttaataagcaagcttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagcta 225  Q
    ||||||||||||||||||||||   || ||||||| ||| | ||||||| |||||||||||||||  | |  ||| ||||| ||| ||||| ||||||||    
T  42627749 aacagctaattttaccaaacacttttaattttaatcagctaacttttcaactataagctatcagccatcagctataagctagcttttcagctatcagcta 42627650  T
Q  226 gcttatggcttcttttt 242  Q
    |||||| |||| |||||    
T  42627649 gcttatagctttttttt 42627633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 1918778 - 1918817
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  1918778 agcttatcagctataagctatcagctagcttatcagctaa 1918817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 23710736 - 23710775
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  23710736 agcttatcagctaaaagctatcagctaacttatcagctaa 23710775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 26205029 - 26205068
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  26205029 agcttatcagctataagctatcagctagcttatcagctaa 26205068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 29379732 - 29379771
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  29379732 agcttatcagctataagctatcagctagcttatcagctaa 29379771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 323596 - 323634
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  323596 agcttatcagctaaaagctatcagctaacttatcagcta 323634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 4513627 - 4513693
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | ||||||||||||||| |||||||||    
T  4513627 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagttatcagcta 4513693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 13121004 - 13120966
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  13121004 agcttatcagctataagctatcagctagcttatcagcta 13120966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18544795 - 18544729
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||| ||||||||||    
T  18544795 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataaactatcagcta 18544729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 25366359 - 25366464
Alignment:
Q  133 gctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaact--tatcagctaacttatcagccatcagctagctta 230  Q
    ||||||||||||||||||  || ||| ||| | | ||||||||||| |||||||  |||||| |   ||||||||||||| ||| | |||||||||||||    
T  25366359 gctaattttaccaaacactttaatttcaatcaactagcttttcagccataagcttccagctatcaactatcagctaacttttcaactatcagctagctta 25366458  T
Q  231 tggctt 236  Q
    | ||||    
T  25366459 tagctt 25366464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 47133946 - 47133908
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  47133946 agcttatcagctataagctatcagctagcttatcagcta 47133908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18034280 - 18034215
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||  || ||| ||||||| | |||||||| |||||| |||||||||    
T  18034280 aacaactaattttaccaaacactttaatttaaataagctaacttttcagatataagttatcagcta 18034215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 5699103 - 5699163
Alignment:
Q  135 taattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  5699103 taattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 5699163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 9224513 - 9224557
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||||||||||||| |||| ||||||||| |||| |||||    
T  9224513 tatcagctaacttatcagctatcaactagcttatagctttttttt 9224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 26844483 - 26844515
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  26844483 tcagctaaaagctatcagctaacttatcagcta 26844515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 32367767 - 32367735
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  32367767 tcagctaaaagctatcagctaacttatcagcta 32367735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 34319297 - 34319329
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||||||||||||||||||||||| |||||    
T  34319297 tcagctataagctatcagctaacttataagcta 34319329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 1875356 - 1875236
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaact-------tatcagctaacttatcagccatca 221  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||       ||||||||||||||||||| ||||    
T  1875356 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctatcagctatcagctagcttttcagctatcagctaacttatcagctatca 1875257  T
Q  222 gctagcttatggcttcttttt 242  Q
    |||||||||| ||||||||||    
T  1875256 gctagcttatagcttcttttt 1875236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 7455249 - 7455353
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||| ||||| |||||||||    
T  7455249 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctaccagctatcagctagcttttcagctatcagctag 7455348  T
Q  227 cttat 231  Q
    |||||    
T  7455349 cttat 7455353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 16495958 - 16495896
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16495958 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcag 16495896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 36986009 - 36985944
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  36986009 aacagctaattttaccaaacacattatttttaataagcaagattttcagctataagctatcagcta 36985944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 38325047 - 38325151
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag--ctaacttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||   | |  ||||||||| ||| ||||| |||||||||    
T  38325047 aacagctaattttaccaaacacattatttttaataagtaagcttttcagctatcagctatcagtcatcagctatcagctagcttttcagctatcagctag 38325146  T
Q  227 cttat 231  Q
    |||||    
T  38325147 cttat 38325151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 36935433 - 36935318
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag--ctaacttatcagctaacttatcagccatcagctag 226  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||   | |  ||||||||| ||| ||||| ||||| |||    
T  36935433 aacagctaattttaccaaacacattatttttaataagcaagttttttagctataagctatcagtcatcagctatcagctagcttttcagctatcagttag 36935334  T
Q  227 cttatggcttcttttt 242  Q
    ||||| |||| |||||    
T  36935333 cttatagcttattttt 36935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 15264863 - 15264761
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctag 226  Q
    |||||||||||||| |||||| | |||||||||||||| | |||||||||||||||||||||||||  | | |||||||| ||| ||||| |||||||||    
T  15264863 aacagctaattttatcaaacatattatttttaataagcgaacttttcagctataagctatcagctatcagtcatcagctagcttttcagctatcagctag 15264764  T
Q  227 ctt 229  Q
    |||    
T  15264763 ctt 15264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 18240073 - 18240131
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18240073 aacagctaattttaccaaacacattatttttaataagaaagcttttcagctataagcta 18240131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 42520519 - 42520577
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  42520519 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctatcagcta 42520577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 5774811 - 5774876
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  5774811 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctatcagctattagcta 5774876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 10034358 - 10034423
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||    
T  10034358 aacaactaattttaccaaacacattatttttaataagcaagtttttcagctataaactattagcta 10034423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 30524384 - 30524448
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  30524384 aacaactaattttaccaaa-acattatttttaataagcaagctttttagctataagctatcagcta 30524448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 14958824 - 14958895
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    |||| |||||||||||||||| | ||||||||||||||||  ||||||||||||||||||| |||| |||||    
T  14958824 aacaactaattttaccaaacatattatttttaataagcaaatttttcagctataagctatctgctagcttat 14958895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 34246064 - 34246122
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||    
T  34246064 aacagctaattttaacaaaaacattatttttaataagcaagcttttcagctatcagcta 34246122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 42097472 - 42097406
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| | | ||||||||||| | |||||||||||||||||||||||||    
T  42097472 aacagctaattttaccaaacacattttattttaataagctaacttttcagctataagctatcagcta 42097406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 181
Target Start/End: Complemental strand, 39239950 - 39239898
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  39239950 aacaactaattttaccaaacacgttatttttaataagcaagcttttcagctat 39239898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Original strand, 8876394 - 8876444
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagct 179  Q
    |||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  8876394 aacaactaattttaccaaacacattatttttaataagcaagtttttcagct 8876444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 45377503 - 45377600
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    |||||||||||||| |||||||  || ||||||||||| |||||||||||||| |||||| |||||  || |||||     ||||||| |||||||||||    
T  45377503 aacagctaattttatcaaacactttaattttaataagctagcttttcagctatcagctataagctagtttttcagc-----tatcagctatcagctagct 45377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 9263744 - 9263706
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  9263744 agcttatcagctataagctatcagctaacttatcagcta 9263706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 9887715 - 9887753
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  9887715 agcttatcagctataagctatcagctaacttatcagcta 9887753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18109221 - 18109155
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  18109221 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 18109155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 35422607 - 35422723
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagcta 225  Q
    |||||||||||||||||||||   | | ||||||||||| | |||||||||||||||||||||||  | |  || || ||| ||| ||||| ||||||||    
T  35422607 aacagctaattttaccaaacattttttattttaataagctaacttttcagctataagctatcagccatcagctaccaactagcttttcagctatcagcta 35422706  T
Q  226 gcttatggcttcttttt 242  Q
    | |||| ||||||||||    
T  35422707 gtttatagcttcttttt 35422723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 7454021 - 7453957
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagc 192  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||    
T  7454021 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagc 7453957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 43569095 - 43569147
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataag 184  Q
    |||||| ||||||||||||| |||||||||| ||||| ||||||| |||||||    
T  43569095 agctaactttaccaaacacattatttttaattagcaaacttttcaactataag 43569147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 26339520 - 26339453
Alignment:
Q  128 taacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||||||||  | | ||||||| ||| | ||||||||||||||||||| |||||    
T  26339520 taacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctattagcta 26339453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 28382068 - 28382029
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  28382068 agcttatcagctataagctatcagctagcttatcagctaa 28382029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 240027 - 239973
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagctttt-cagctataagctatcagc 192  Q
    |||| |||||||| || ||||||||||| ||||||| ||||||||||||||||||    
T  240027 tttatcaaacacattaattttaataagcgagctttttcagctataagctatcagc 239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 11447828 - 11447937
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagc 227  Q
    ||||| ||||||||||||||||  | | ||||||||||| | |||||||||||| ||| ||||||||     | ||||| ||| ||||| ||||||||||    
T  11447828 aacagttaattttaccaaacacttttaattttaataagctaacttttcagctatcagccatcagcta-----taagctagcttttcagctatcagctagc 11447922  T
Q  228 ttatggcttcttttt 242  Q
    |||| |||| |||||    
T  11447923 ttatagcttgttttt 11447937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 18247413 - 18247475
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||   | ||||||||| | | ||||||||||||||||||||||    
T  18247413 aacaactaattttaccaaacacttcaattttaataaaccatcttttcagctataagctatcag 18247475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 43136383 - 43136421
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  43136383 agcttatcagctataagctatcagctaccttatcagcta 43136421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 37241777 - 37241834
Alignment:
Q  129 aacagctaattttaccaaacac-actatttttaataagcaagcttttcagctataagc 185  Q
    ||||||||||||||||||||||   || ||||||||||| ||||||||| ||||||||    
T  37241777 aacagctaattttaccaaacacttttaattttaataagctagcttttcaactataagc 37241834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 5774908 - 5774952
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||    
T  5774908 tatcagctaatttatcagctatcagctagcttatagcttattttt 5774952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 10838960 - 10838928
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  10838960 tcagctaaaagctatcagctaacttatcagcta 10838928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 41796128 - 41796096
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  41796128 tcagctaaaagctatcagctaacttatcagcta 41796096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 36944257 - 36944158
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||| |||||    
T  36944257 aaattaaattgtcatgtactttgaggtcattttatatttataacagctaattttatcaaacacattatttttaataagtgagcttttcagctatcagcta 36944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 36960205 - 36960281
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataa 164  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36960205 aaattaaattgtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacattatttttaataa 36960281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 22777934 - 22778034
Alignment:
Q  133 gctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctagctta 230  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||  | | |||||||||||| ||||| |||||||||||||    
T  22777934 gctaattttaccaaaaacattatttttaataagcaagcttttcagctataaactatcagctatcagtcatcagctaacttttcagctatcagctagctta 22778033  T
Q  231 t 231  Q
    |    
T  22778034 t 22778034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 29524706 - 29524641
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29524706 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 29524641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 34589265 - 34589200
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34589265 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 34589200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 200
Target Start/End: Original strand, 42423380 - 42423452
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  42423380 taacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcagctagcttat 42423452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 12282376 - 12282473
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||     ||||||||||||| ||||| |||| ||| ||    
T  12282376 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcagc-----tatcagctaacttttcagctatcaactaact 12282470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 190
Target Start/End: Complemental strand, 27812396 - 27812334
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27812396 taacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatca 27812334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 36761867 - 36761929
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36761867 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcag 36761929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 15499393 - 15499454
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15499393 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatca 15499454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 16217690 - 16217613
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |||||||    
T  16217690 aacaactaattttaccaaacacattatttttaataagcaaacttttcagctataagctatcagctagcttttcagcta 16217613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 37530087 - 37530022
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  37530087 aacagctaattttaccaaacacattatttttaacaagcaagcttttcagctataagctatcagcta 37530022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 194
Target Start/End: Complemental strand, 11783568 - 11783504
Alignment:
Q  130 acagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  11783568 acagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcagcta 11783504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 23591385 - 23591450
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||    
T  23591385 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagccatcagcta 23591450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 35639517 - 35639582
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  35639517 aacagctaattttatcaaatacattatttttaataagcaagcttttcagctataagctatcagcta 35639582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 42710037 - 42710102
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  42710037 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctataagcta 42710102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 77091 - 77211
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaact-------tatcagctaacttatcagccatca 221  Q
    |||| |||||||||||||||||| ||||||||||||| || ||||||| |||| |||||||||||||||       ||||| ||||||||||||| ||||    
T  77091 aacatctaattttaccaaacacattatttttaataaggaatcttttcatctatcagctatcagctaacttttcaactatcaactaacttatcagctatca 77190  T
Q  222 gctagcttatggcttcttttt 242  Q
    | |||||||| |||| |||||    
T  77191 gttagcttatagcttattttt 77211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 24172089 - 24172147
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  24172089 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctatcagcta 24172147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 6788955 - 6788890
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||||||||    
T  6788955 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctatcagtcatcagcta 6788890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 41733655 - 41733590
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||    
T  41733655 aacagttaattttaccaaacacattatttttaataagcaagtttttcagctataagttatcagcta 41733590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 7614391 - 7614269
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    |||||||||||||| |||||||| ||||||||||||||||| ||||||| ||||| ||||||||||         | |||||||||| ||| ||||| ||    
T  7614391 aacagctaattttatcaaacacattatttttaataagcaagtttttcagttataaactatcagctatcagtcatcagttatcagctagcttttcagctat 7614292  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| |||| |||||    
T  7614291 cagctagcttatagcttattttt 7614269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 7156828 - 7156762
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagc-ttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| |||||||||||| | | | ||||||||||||||||||||||||    
T  7156828 aacagctaattttaccaaacacattatttttaataaacgatctttttcagctataagctatcagcta 7156762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 24464326 - 24464373
Alignment:
Q  143 ccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  24464326 ccaaacacattatttttaataagcgagtttttcagctataagctatca 24464373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 12939111 - 12939071
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaag 169  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  12939111 aacaactaattttaccaaacacattatttttaataagcaag 12939071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 12953196 - 12953156
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaag 169  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  12953196 aacaactaattttaccaaacacattatttttaataagcaag 12953156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 29524609 - 29524565
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  29524609 tatcagctagcttatcagctatcagctagcttatagcttcttttt 29524565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 37529990 - 37529946
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  37529990 tatcagctagcttatcagctatcagctagcttatagcttcttttt 37529946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 194
Target Start/End: Original strand, 41356838 - 41356894
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagctttt-cagctataagctatcagcta 194  Q
    ||||||||||||| || |||||| |||| ||||||| ||||||||||||||||||||    
T  41356838 tttaccaaacacattaattttaacaagcgagctttttcagctataagctatcagcta 41356894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 8023375 - 8023336
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  8023375 agcttatcagctataagctatcagctagcttatcagctaa 8023336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 11576170 - 11576276
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagctttt-cagctataagctatcagc--taacttatcagctaacttatcagccatcagctagcttatggct 235  Q
    |||| |||||||| || ||||||||||| ||||||| ||||||||||||||||||  | |  ||| ||||| ||| ||||| ||||| |||||||| |||    
T  11576170 tttatcaaacacattaattttaataagcgagctttttcagctataagctatcagccatcagctataagctagcttttcagctatcagatagcttatagct 11576269  T
Q  236 tcttttt 242  Q
    | |||||    
T  11576270 tattttt 11576276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 7947924 - 7947858
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  7947924 aacaactaattttaccaaacacttttaattttaatgagctaacttttcagctataagctatcagcta 7947858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 12363020 - 12362982
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  12363020 agcttatcagctataagctatcagctagcttatcagcta 12362982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 13227966 - 13227928
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  13227966 agcttatcagctataagctatcagctagcttatcagcta 13227928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 15526247 - 15526185
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||   | |||||||||   | ||||||||||||||||||||||    
T  15526247 aacagctaattttaccaaacacttcaattttaataaatgatcttttcagctataagctatcag 15526185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 19955723 - 19955685
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  19955723 agcttatcagctaaaagctatcagctaacttatcagcta 19955685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 35235958 - 35235920
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  35235958 agcttatcagctaaaagctatcagctaacttatcagcta 35235920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 2498430 - 2498462
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    |||||||||| ||||||||||||||||||||||    
T  2498430 tcagctataaactatcagctaacttatcagcta 2498462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 5102183 - 5102119
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagct 193  Q
    |||| ||||||||| |||||||| ||||||||| || | || |||||| ||| ||||||||||||    
T  5102183 aacaactaattttatcaaacacattatttttaacaaacgagtttttcaactacaagctatcagct 5102119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 14646774 - 14646742
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  14646774 tcagctaaaagctatcagctaacttatcagcta 14646742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 15499490 - 15499534
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||| ||||||||| |||||||||||||| |||| |||||    
T  15499490 tatcagctagcttatcagctatcagctagcttatagcttattttt 15499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 35235138 - 35235106
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  35235138 tcagctaaaagctatcagctaacttatcagcta 35235106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 41991022 - 41990899
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagcca 218  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         |  ||||||||| ||||||||| |    
T  41991022 taacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctatcagctaccagctatcagctagcttatcagcta 41990923  T
Q  219 tcagctagcttatggcttcttttt 242  Q
    ||||||||||||| ||||||||||    
T  41990922 tcagctagcttatagcttcttttt 41990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 8320809 - 8320712
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     ||||||||| ||| ||||| |||||||||||    
T  8320809 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagc-----tatcagctagcttttcagctatcagctagct 8320715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 1362436 - 1362507
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  1362436 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagctagcttat 1362507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 51063600 - 51063720
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaact-------tatcagctaacttatcagccatca 221  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||       ||||||||||||||||||| ||||    
T  51063600 aacaactaattttaccaaacacattatttttaataagcaagcttttcagttataagctatcagctagcttttcagctatcagctaacttatcagctatca 51063699  T
Q  222 gctagcttatggcttcttttt 242  Q
    |||| ||||| |||| |||||    
T  51063700 gctaacttatagcttattttt 51063720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 8880120 - 8880185
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8880120 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 8880185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 30317328 - 30317220
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     | |||||||||||| ||| | |||||||| ||    
T  30317328 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcag-----tcatcagctaacttttcatctatcagctatct 30317234  T
Q  229 tatggcttcttttt 242  Q
    ||| |||| |||||    
T  30317233 tatagcttattttt 30317220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 34435358 - 34435293
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34435358 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 34435293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 51981543 - 51981642
Alignment:
Q  88 aaattaaatagtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    |||||||||  |||||||||||||||||||||||||||||||||  | ||||||| |||||||| |||||||||||||  |||||||||||||| |||||    
T  51981543 aaattaaattatcatgtacttttaggtcattttatatttataactaccaattttatcaaacacattatttttaataagtgagcttttcagctatcagcta 51981642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 128 - 194
Target Start/End: Complemental strand, 2557242 - 2557176
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2557242 taacagctaattttatcaaacacattatttttaataagcaagcttttcagctataagctatcagcta 2557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 36238602 - 36238663
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36238602 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatca 36238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 242
Target Start/End: Original strand, 19275807 - 19275925
Alignment:
Q  133 gctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccatcagc 223  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||         |  ||||||||||||| ||||| ||||||    
T  19275807 gctaattttaccaaacacattatttttaataagcaagcttttcaactataagctatcagctatccgtcatcagctatcagctaacttttcagctatcagc 19275906  T
Q  224 tagcttatggcttcttttt 242  Q
    |||||||| |||| |||||    
T  19275907 tagcttatagcttattttt 19275925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 30741217 - 30741155
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  30741217 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataaactatcag 30741155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 35406311 - 35406372
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatca 190  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  35406311 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataaactatca 35406372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 54462810 - 54462688
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta--act-------tatcagctaacttatcagccat 219  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| ||  |||       ||||||||||||||||||| ||    
T  54462810 aacaactaattttaccaaacacattatttttattaagcaagcttttcagctatcagctatcagttatcactcatcagctatcagctaacttatcagctat 54462711  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| |||| |||||    
T  54462710 cagctagcttatagcttattttt 54462688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 52184372 - 52184310
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  52184372 aacaactaattttaccaaacacgttatttttaataagcaagcttttcagctataagttatcag 52184310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 51761598 - 51761657
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctat 188  Q
    |||| ||||| |||||||||||| |||||||||||||| |||||||||||||||||||||    
T  51761598 aacaactaatgttaccaaacacattatttttaataagcgagcttttcagctataagctat 51761657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 5506584 - 5506690
Alignment:
Q  139 tttaccaaacacactatttttaataagcaagc-ttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagctagcttatggct 235  Q
    ||||||||||||| || ||||||||||| ||| ||||||||||||||||||||||  | | ||||  |||| ||| ||||| |||||||||||||| |||    
T  5506584 tttaccaaacacattaattttaataagcgagctttttcagctataagctatcagccatcagttatatgctagcttttcagctatcagctagcttatagct 5506683  T
Q  236 tcttttt 242  Q
    | |||||    
T  5506684 tattttt 5506690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 6125487 - 6125546
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||| |||||||||||| | || ||||||||||||||||||| ||||    
T  6125487 taattttaccaaacacattatttttaataaacgagtttttcagctataagctatctgcta 6125546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 7042429 - 7042491
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||||||||| |   | ||||||||| ||| ||||||||||||||||||||||    
T  7042429 aacagctaattttaccaaacccttcaattttaataaacaatcttttcagctataagctatcag 7042491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 40374019 - 40373953
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  40374019 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 40373953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 46115616 - 46115682
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||||||| | |||||||||||||||||| ||||||    
T  46115616 aacagctaattttaccaaacacttttaattttaataagctaacttttcagctataagctaccagcta 46115682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 46116283 - 46116349
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||||||| | |||||||||||||||||| ||||||    
T  46116283 aacagctaattttaccaaacacttttaattttaataagctaacttttcagctataagctaccagcta 46116349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 50937638 - 50937576
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    |||| |||||||||||||||||  || ||||||||| | | ||||||||||||||||||||||    
T  50937638 aacatctaattttaccaaacactttaattttaataaaccatcttttcagctataagctatcag 50937576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 17667517 - 17667562
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagctttt 174  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||    
T  17667517 aacatctaattttaccaaacacatcatttttaataagcaagctttt 17667562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 25998522 - 25998457
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| || |||||||||   || |||||||||||||||| |||||||    
T  25998522 aacaactaattttaccaaacacattacttttaataaatgagtttttcagctataagctgtcagcta 25998457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 32999175 - 32999059
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagc--taacttatcagctaacttatcagccatcagcta 225  Q
    ||||| ||||||||||||||||  | | ||||||||||| | |||||||||||||| ||||||||  | |  || || ||||||| ||||| ||| ||||    
T  32999175 aacagttaattttaccaaacactttttattttaataagctaacttttcagctataaactatcagccatcagctaccaactaacttttcagctatcggcta 32999076  T
Q  226 gcttatggcttcttttt 242  Q
    |||||| ||||||||||    
T  32999075 gcttatagcttcttttt 32999059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 34435261 - 34435217
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  34435261 tatcagctagcttatcagctatcagctagcttatagcttcttttt 34435217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 242
Target Start/End: Complemental strand, 36659562 - 36659518
Alignment:
Q  198 tatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||    
T  36659562 tatcagctaacttatcagctatcagctagcttatagctttttttt 36659518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 2579430 - 2579391
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  2579430 agcttatcagctataagctatcagctagcttatcagctaa 2579391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 19947747 - 19947708
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  19947747 agcttatcagctataagctatcagctagcttatcagctaa 19947708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 191
Target Start/End: Original strand, 38732741 - 38732804
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||||||||  | | ||||||| ||| | ||||||||||||||||||||||    
T  38732741 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcag 38732804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 40562766 - 40562727
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  40562766 agcttatcagctataagctatcagctagcttatcagctaa 40562727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 46668929 - 46669027
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagc 227  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||| ||| ||||||||     | ||||| ||| ||||||||||||||||    
T  46668929 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctattagccatcagcta-----taagctagcttttcagccatcagctagc 46669023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 138 - 181
Target Start/End: Original strand, 54598799 - 54598842
Alignment:
Q  138 ttttaccaaacacactatttttaataagcaagcttttcagctat 181  Q
    |||||||||||||| |||||||||||| | ||||||||||||||    
T  54598799 ttttaccaaacacattatttttaataaacgagcttttcagctat 54598842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 21707842 - 21707880
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  21707842 agcttatcagctataagctatcagctagcttatcagcta 21707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 29080682 - 29080644
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  29080682 agcttatcagctataagctatcagctagcttatcagcta 29080644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 35500358 - 35500396
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  35500358 agcttatcagctataagctatcagctagcttatcagcta 35500396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 35500384 - 35500422
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  35500384 agcttatcagctataagctatcagctagcttatcagcta 35500422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 36807512 - 36807590
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    |||| |||||||||||||||||  | | ||||||| ||| | |||||||||||| |||||| ||||||||| |||||||    
T  36807512 aacaactaattttaccaaacacttttaattttaatcagctaacttttcagctatcagctataagctaacttttcagcta 36807590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 45355631 - 45355697
Alignment:
Q  128 taacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||||| ||  || ||| ||| ||| | ||||||||||||||||| |||||||    
T  45355631 taacagctaattttaccaaatactttaatttcaatcagctaacttttcagctataagctttcagcta 45355697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 191
Target Start/End: Complemental strand, 45355875 - 45355817
Alignment:
Q  134 ctaattttaccaaacacactatttttaataagcaagctttt-cagctataagctatcag 191  Q
    |||| ||||||||||||  || ||||||||||| ||||||| |||||||||||||||||    
T  45355875 ctaactttaccaaacactttaattttaataagctagctttttcagctataagctatcag 45355817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 50500495 - 50500533
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  50500495 agcttatcagctataaactatcagctaacttatcagcta 50500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 35555127 - 35555191
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||   ||| |||||| ||||| ||||||||||    
T  35555127 aacaactaattttaccaaacacattatttttaataaatgagc-tttcagttataatctatcagcta 35555191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 12765207 - 12765271
Alignment:
Q  129 aacagctaattttaccaaacacactat-ttttaataagcaagcttttcagctataagctatcagc 192  Q
    |||| |||||||||||||||||  | | ||||||||||| | |||||||||||||| ||||||||    
T  12765207 aacaactaattttaccaaacactttttattttaataagctaacttttcagctataaactatcagc 12765271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 38186520 - 38186552
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||||||||||||||||| |||||||||||    
T  38186520 tcagctataagctatcagctagcttatcagcta 38186552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 206
Target Start/End: Original strand, 45369659 - 45369687
Alignment:
Q  178 ctataagctatcagctaacttatcagcta 206  Q
    |||||||||||||||||||||||||||||    
T  45369659 ctataagctatcagctaacttatcagcta 45369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 52858653 - 52858685
Alignment:
Q  174 tcagctataagctatcagctaacttatcagcta 206  Q
    ||||||| |||||||||||||||||||||||||    
T  52858653 tcagctaaaagctatcagctaacttatcagcta 52858685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 24118566 - 24118444
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta---------acttatcagctaacttatcagccat 219  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||         |  ||||||||||||||||||| ||    
T  24118566 aacagctaattttaccaaacacattatttttaataagcaagtttttcagctataagctatcagctatcagctaccagctatcagctaacttatcagctat 24118467  T
Q  220 cagctagcttatggcttcttttt 242  Q
    |||||||||||| ||||||||||    
T  24118466 cagctagcttatagcttcttttt 24118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 18368967 - 18368902
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18368967 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 18368902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 22708035 - 22708100
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22708035 aacagctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 22708100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 13755675 - 13755598
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagcta 206  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  13755675 aacatctaattttaccaaacacattatttttaataagcaaacttttcagctataagttatcagctagcttttcagcta 13755598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 32986317 - 32986209
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttatcagctaacttatcagccatcagctagct 228  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||     ||||||||| ||| ||||| | |||||||||    
T  32986317 aacaactaattttaccaaacacgttatttttaataagcaagcttttcagctataaactatcagc-----tatcagctagcttttcagctaccagctagct 32986223  T
Q  229 tatggcttcttttt 242  Q
    ||| |||| |||||    
T  32986222 tatagcttattttt 32986209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 20646410 - 20646481
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    |||||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  20646410 aacagctaattttatcaaatacattatttttaataagcaggcttttcagctataagctatcagctagcttat 20646481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 25022329 - 25022264
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  25022329 aacaactaattttaccaaacacattatttttaataagcaaacttttcagctataagttatcagcta 25022264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 12131217 - 12131282
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||    
T  12131217 aacaactaattttaccaaacacattatttttaataaacaagtttttcagctataaactatcagcta 12131282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 20526021 - 20526092
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagctaacttat 200  Q
    ||||||||||||||||||||||  || ||||||||||| ||||||| | |||| ||||||||||||||||||    
T  20526021 aacagctaattttaccaaacactttaattttaataagctagctttttaactatcagctatcagctaacttat 20526092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 22708114 - 22708190
Alignment:
Q  168 agcttttcagctataagctatcagcta--acttatcagctaacttatcagccatcagctagcttatggcttcttttt 242  Q
    |||||||||||||||||||||||||||  | | |||||||| ||| ||||| |||||||||||||| |||| |||||    
T  22708114 agcttttcagctataagctatcagctatcagtcatcagctagcttttcagctatcagctagcttatagcttattttt 22708190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 32441697 - 32441612
Alignment:
Q  98 gtcatgtacttttaggtcattttatatttataacagctaattttaccaaacacactatttttaataagcaagcttttcagctataa 183  Q
    |||||||| |||||||| ||||||||||||||| || |||||||  |||| | | ||||||||||||||||  |||||| ||||||    
T  32441697 gtcatgtatttttaggttattttatatttataagagttaattttgtcaaatatattatttttaataagcaaatttttcacctataa 32441612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 5957013 - 5957071
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagcta 187  Q
    |||| |||||||||||||||||| ||||||||| |||  || |||||||||||||||||    
T  5957013 aacaactaattttaccaaacacattatttttaaaaagtgagattttcagctataagcta 5957071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 18802295 - 18802361
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||||||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  18802295 aacagctaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 18802361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 32560629 - 32560694
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||   | ||||||||| | | |||||||||||||||||||||||||    
T  32560629 aacaactaattttaccaaacacttcaattttaataaactatcttttcagctataagctatcagcta 32560694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 32561791 - 32561731
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatc 189  Q
    ||||||||||||||||||||||   | ||||||||| | | ||||||||||||||||||||    
T  32561791 aacagctaattttaccaaacacttcaattttaataaaccatcttttcagctataagctatc 32561731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 34232311 - 34232272
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagctaa 207  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  34232311 agcttatcagctataagctatcagctagcttatcagctaa 34232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 4977107 - 4977173
Alignment:
Q  129 aacagctaattttaccaaacacact-atttttaataagcaagcttttcagctataagctatcagcta 194  Q
    ||||| ||||||||||||||||  | | ||||||| ||| | |||||||||||||||||||||||||    
T  4977107 aacagttaattttaccaaacacttttaattttaatcagctaacttttcagctataagctatcagcta 4977173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 32732510 - 32732548
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  32732510 agcttatcagctataagctatcagctagcttatcagcta 32732548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 194
Target Start/End: Original strand, 14856213 - 14856278
Alignment:
Q  130 acagctaattttaccaaacacactatttttaataagcaag-cttttcagctataagctatcagcta 194  Q
    |||||||| ||||||||||||  || ||||||||||| ||  ||||||||||||||||| ||||||    
T  14856213 acagctaactttaccaaacactttaattttaataagctagttttttcagctataagctaccagcta 14856278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 191
Target Start/End: Original strand, 21527572 - 21527628
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcag 191  Q
    ||||||||||||||||  || ||||||| ||| || |||||||||||||||| ||||    
T  21527572 taattttaccaaacactttaattttaatcagctagtttttcagctataagctttcag 21527628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 5386 - 5448
Alignment:
Q  132 agctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5386 agctaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 7736 - 7801
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7736 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctataagctatcagcta 7801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 19090 - 19155
Alignment:
Q  129 aacagctaattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  19090 aacaactaattttaccaaacacattatttttaataagcaagcttttcagctttaagctatcagcta 19155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 194
Target Start/End: Original strand, 76887 - 76946
Alignment:
Q  135 taattttaccaaacacactatttttaataagcaagcttttcagctataagctatcagcta 194  Q
    |||||||||| |||||  || ||| ||| |||||| ||||||||||||||||||||||||    
T  76887 taattttacccaacactttaatttaaatcagcaagtttttcagctataagctatcagcta 76946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 5204 - 5238
Alignment:
Q  174 tcagctataagctatcagctaacttatcagctaac 208  Q
    ||||||||||||||||||||| |||||||||||||    
T  5204 tcagctataagctatcagctagcttatcagctaac 5238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 191
Target Start/End: Complemental strand, 14184 - 14154
Alignment:
Q  161 ataagcaagcttttcagctataagctatcag 191  Q
    |||||||||||||||||||||||||||||||    
T  14184 ataagcaagcttttcagctataagctatcag 14154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 129566 - 129528
Alignment:
Q  168 agcttttcagctataagctatcagctaacttatcagcta 206  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  129566 agcttatcagctataagctatcagctagcttatcagcta 129528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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