View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2742_low_19 (Length: 358)

Name: NF2742_low_19
Description: NF2742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2742_low_19
NF2742_low_19
[»] chr5 (36 HSPs)
chr5 (13-253)||(38056122-38056362)
chr5 (221-277)||(29046025-29046081)
chr5 (221-280)||(6476790-6476849)
chr5 (212-269)||(235596-235653)
chr5 (211-276)||(19128767-19128832)
chr5 (221-276)||(28705878-28705933)
chr5 (227-277)||(234697-234747)
chr5 (223-277)||(29087921-29087975)
chr5 (212-269)||(236919-236976)
chr5 (227-276)||(237826-237875)
chr5 (227-276)||(19359701-19359750)
chr5 (221-277)||(4084876-4084932)
chr5 (225-269)||(7632099-7632143)
chr5 (221-265)||(10554555-10554599)
chr5 (211-275)||(14478919-14478983)
chr5 (221-269)||(27364486-27364534)
chr5 (221-268)||(28705170-28705217)
chr5 (211-269)||(17071228-17071286)
chr5 (211-269)||(34600265-34600323)
chr5 (227-276)||(19360481-19360530)
chr5 (214-271)||(20854897-20854954)
chr5 (225-269)||(1281840-1281884)
chr5 (225-265)||(1283503-1283543)
chr5 (225-269)||(1554086-1554130)
chr5 (230-269)||(1283533-1283572)
chr5 (230-269)||(10554526-10554565)
chr5 (226-269)||(25858214-25858257)
chr5 (211-269)||(17071783-17071841)
chr5 (218-268)||(22799756-22799806)
chr5 (227-261)||(27363779-27363813)
chr5 (223-269)||(34709038-34709084)
chr5 (223-269)||(36038699-36038745)
chr5 (211-280)||(34600820-34600889)
chr5 (225-269)||(22798905-22798949)
chr5 (225-277)||(33005517-33005569)
chr5 (221-269)||(38056798-38056846)
[»] chr6 (19 HSPs)
chr6 (13-245)||(4940042-4940273)
chr6 (157-277)||(11434392-11434512)
chr6 (212-277)||(26529503-26529568)
chr6 (212-276)||(10171273-10171337)
chr6 (211-269)||(12344898-12344956)
chr6 (209-269)||(10171953-10172013)
chr6 (209-269)||(26528827-26528887)
chr6 (218-276)||(19310998-19311056)
chr6 (221-269)||(8488473-8488521)
chr6 (221-269)||(19323766-19323814)
chr6 (223-266)||(19322990-19323033)
chr6 (225-275)||(19311830-19311880)
chr6 (225-275)||(33436277-33436327)
chr6 (223-280)||(9441230-9441287)
chr6 (221-276)||(18227729-18227783)
chr6 (218-269)||(33435344-33435395)
chr6 (211-269)||(3623179-3623237)
chr6 (226-276)||(8489284-8489334)
chr6 (221-265)||(5861894-5861938)
[»] chr7 (46 HSPs)
chr7 (171-269)||(3772476-3772574)
chr7 (168-269)||(45931164-45931265)
chr7 (221-280)||(26636096-26636155)
chr7 (185-269)||(30661419-30661503)
chr7 (185-269)||(37949609-37949693)
chr7 (221-276)||(46428184-46428239)
chr7 (221-275)||(7668480-7668534)
chr7 (222-276)||(25599019-25599073)
chr7 (221-269)||(25342501-25342549)
chr7 (221-269)||(25343307-25343355)
chr7 (198-277)||(25343216-25343295)
chr7 (221-275)||(26636860-26636914)
chr7 (223-269)||(30660597-30660643)
chr7 (223-269)||(37950469-37950515)
chr7 (227-276)||(45099899-45099948)
chr7 (225-269)||(13785597-13785641)
chr7 (171-275)||(18977720-18977823)
chr7 (221-269)||(19067641-19067689)
chr7 (221-269)||(24389616-24389664)
chr7 (221-269)||(27948450-27948498)
chr7 (225-269)||(43065120-43065164)
chr7 (218-269)||(45161973-45162024)
chr7 (221-263)||(3027984-3028026)
chr7 (223-277)||(46428819-46428873)
chr7 (222-275)||(3903340-3903393)
chr7 (221-278)||(40273555-40273612)
chr7 (225-269)||(1417612-1417656)
chr7 (221-269)||(3029198-3029246)
chr7 (221-269)||(16664125-16664173)
chr7 (221-269)||(17638485-17638533)
chr7 (221-269)||(19068395-19068443)
chr7 (221-269)||(21496983-21497031)
chr7 (225-269)||(38225979-38226023)
chr7 (225-269)||(47719708-47719752)
chr7 (222-269)||(24719339-24719386)
chr7 (226-269)||(31278159-31278202)
chr7 (211-269)||(3219536-3219594)
chr7 (223-269)||(14686135-14686181)
chr7 (227-269)||(37395505-37395547)
chr7 (226-276)||(38225297-38225347)
chr7 (223-276)||(25599821-25599874)
chr7 (225-269)||(3688388-3688432)
chr7 (225-269)||(14305094-14305138)
chr7 (225-265)||(24453730-24453770)
chr7 (227-263)||(31277433-31277469)
chr7 (221-277)||(37706424-37706480)
[»] scaffold0086 (1 HSPs)
scaffold0086 (168-269)||(8238-8339)
[»] chr4 (54 HSPs)
chr4 (168-276)||(53148559-53148666)
chr4 (221-280)||(47785799-47785858)
chr4 (211-269)||(47688469-47688527)
chr4 (211-269)||(53732440-53732498)
chr4 (211-276)||(8248510-8248575)
chr4 (211-276)||(8266175-8266240)
chr4 (200-277)||(30573688-30573765)
chr4 (221-277)||(9365166-9365222)
chr4 (221-276)||(20774180-20774235)
chr4 (211-277)||(8247693-8247759)
chr4 (227-280)||(2444366-2444419)
chr4 (185-254)||(7841811-7841880)
chr4 (221-265)||(16903643-16903687)
chr4 (221-277)||(24374786-24374842)
chr4 (221-269)||(26147032-26147080)
chr4 (209-269)||(32089601-32089661)
chr4 (209-269)||(56262483-56262543)
chr4 (222-269)||(599302-599349)
chr4 (221-272)||(40348143-40348194)
chr4 (226-269)||(52871303-52871346)
chr4 (225-268)||(55976172-55976215)
chr4 (211-269)||(8265366-8265424)
chr4 (209-267)||(9365804-9365862)
chr4 (226-276)||(31329722-31329772)
chr4 (214-268)||(53733125-53733179)
chr4 (227-269)||(53772812-53772854)
chr4 (211-269)||(55001430-55001488)
chr4 (211-256)||(5046002-5046047)
chr4 (223-276)||(7841542-7841595)
chr4 (226-275)||(44469491-44469540)
chr4 (221-269)||(11938716-11938764)
chr4 (221-269)||(19080390-19080438)
chr4 (212-260)||(53733722-53733770)
chr4 (225-269)||(53773590-53773634)
chr4 (226-269)||(3654520-3654563)
chr4 (225-276)||(24158824-24158875)
chr4 (226-269)||(42882686-42882729)
chr4 (225-260)||(55976959-55976994)
chr4 (223-269)||(2446163-2446209)
chr4 (230-276)||(16903677-16903723)
chr4 (227-269)||(19550291-19550333)
chr4 (223-265)||(43146650-43146692)
chr4 (211-269)||(47687914-47687972)
chr4 (170-260)||(56263022-56263111)
chr4 (212-269)||(7842520-7842577)
chr4 (223-276)||(40495093-40495146)
chr4 (221-277)||(1465317-1465373)
chr4 (221-269)||(1866348-1866396)
chr4 (221-269)||(11939441-11939489)
chr4 (225-269)||(24551927-24551971)
chr4 (221-269)||(26159621-26159669)
chr4 (226-258)||(32088835-32088867)
chr4 (221-269)||(53147876-53147924)
chr4 (225-269)||(55000692-55000736)
[»] chr3 (42 HSPs)
chr3 (170-254)||(44699881-44699965)
chr3 (209-276)||(52266441-52266508)
chr3 (222-275)||(265099-265152)
chr3 (221-277)||(46150729-46150785)
chr3 (210-269)||(31974656-31974715)
chr3 (185-260)||(48413333-48413407)
chr3 (209-280)||(48507020-48507091)
chr3 (225-276)||(48648201-48648252)
chr3 (223-277)||(14871150-14871204)
chr3 (212-265)||(17605715-17605768)
chr3 (225-269)||(17603173-17603217)
chr3 (225-269)||(21727533-21727577)
chr3 (221-275)||(31114943-31114994)
chr3 (221-277)||(41458030-41458086)
chr3 (221-268)||(981673-981720)
chr3 (221-276)||(45081403-45081458)
chr3 (227-277)||(55373712-55373762)
chr3 (226-271)||(11652296-11652341)
chr3 (227-280)||(30222104-30222157)
chr3 (221-274)||(37520561-37520614)
chr3 (223-276)||(37988220-37988273)
chr3 (227-276)||(52605489-52605538)
chr3 (200-276)||(48764475-48764551)
chr3 (226-269)||(10847914-10847957)
chr3 (221-260)||(13477778-13477817)
chr3 (225-260)||(17603965-17604000)
chr3 (226-277)||(20213536-20213587)
chr3 (222-269)||(31115600-31115647)
chr3 (209-272)||(48506440-48506502)
chr3 (209-268)||(52282400-52282459)
chr3 (226-276)||(13477055-13477105)
chr3 (226-268)||(20212986-20213028)
chr3 (227-269)||(37987238-37987280)
chr3 (227-269)||(40872814-40872856)
chr3 (225-275)||(48765074-48765124)
chr3 (225-275)||(51827498-51827548)
chr3 (221-279)||(52281761-52281819)
chr3 (221-254)||(29856683-29856716)
chr3 (227-260)||(44699826-44699859)
chr3 (225-274)||(48649177-48649226)
chr3 (225-269)||(46149634-46149678)
chr3 (225-269)||(51469283-51469327)
[»] chr8 (25 HSPs)
chr8 (168-269)||(3291483-3291581)
chr8 (211-276)||(26654367-26654432)
chr8 (223-276)||(41974638-41974691)
chr8 (221-269)||(38576301-38576349)
chr8 (211-280)||(22320368-22320437)
chr8 (225-276)||(3165125-3165176)
chr8 (225-280)||(31641505-31641560)
chr8 (227-277)||(8373698-8373748)
chr8 (215-269)||(31602021-31602075)
chr8 (189-275)||(37064815-37064900)
chr8 (228-277)||(37732823-37732872)
chr8 (212-256)||(8298265-8298309)
chr8 (200-276)||(31642065-31642141)
chr8 (225-269)||(32414527-32414571)
chr8 (221-276)||(8996973-8997028)
chr8 (227-269)||(8372918-8372960)
chr8 (226-268)||(9197101-9197143)
chr8 (225-259)||(11686241-11686275)
chr8 (226-276)||(26652291-26652341)
chr8 (226-280)||(32979828-32979882)
chr8 (196-266)||(38628258-38628328)
chr8 (209-269)||(45907-45967)
chr8 (225-269)||(27441471-27441515)
chr8 (225-269)||(28929850-28929894)
chr8 (221-269)||(37025011-37025058)
[»] chr1 (38 HSPs)
chr1 (196-277)||(13263491-13263572)
chr1 (214-265)||(46812180-46812231)
chr1 (225-277)||(25469090-25469142)
chr1 (221-277)||(30663354-30663410)
chr1 (221-269)||(34309230-34309278)
chr1 (222-269)||(4433848-4433895)
chr1 (221-276)||(30663976-30664031)
chr1 (223-269)||(49680815-49680861)
chr1 (227-276)||(37853141-37853190)
chr1 (208-276)||(7406242-7406310)
chr1 (221-269)||(10121552-10121600)
chr1 (221-269)||(13262837-13262885)
chr1 (200-276)||(25468507-25468583)
chr1 (213-269)||(28181537-28181593)
chr1 (221-269)||(30932795-30932843)
chr1 (222-269)||(4439207-4439254)
chr1 (221-276)||(8987787-8987842)
chr1 (221-280)||(34308466-34308525)
chr1 (223-269)||(7559201-7559247)
chr1 (226-276)||(19172580-19172630)
chr1 (211-269)||(28182062-28182120)
chr1 (221-269)||(168894-168942)
chr1 (221-269)||(8988548-8988596)
chr1 (221-269)||(27256712-27256760)
chr1 (211-275)||(36389773-36389837)
chr1 (225-269)||(47967866-47967910)
chr1 (226-269)||(10120787-10120830)
chr1 (222-269)||(11548804-11548851)
chr1 (226-269)||(17172667-17172710)
chr1 (226-269)||(24991974-24992017)
chr1 (215-258)||(32038492-32038535)
chr1 (223-269)||(7558453-7558499)
chr1 (223-269)||(11704810-11704856)
chr1 (227-269)||(17171935-17171977)
chr1 (227-269)||(45818025-45818067)
chr1 (235-269)||(46391880-46391914)
chr1 (211-256)||(23026600-23026645)
chr1 (221-269)||(169627-169675)
[»] chr2 (35 HSPs)
chr2 (184-280)||(22560530-22560626)
chr2 (198-277)||(1296376-1296455)
chr2 (198-276)||(9276306-9276384)
chr2 (221-269)||(1297122-1297170)
chr2 (221-269)||(9275591-9275639)
chr2 (221-269)||(29719451-29719499)
chr2 (221-279)||(36237626-36237684)
chr2 (226-271)||(40252025-40252070)
chr2 (221-269)||(11750262-11750310)
chr2 (212-276)||(29512369-29512433)
chr2 (211-269)||(18174659-18174717)
chr2 (211-277)||(42459048-42459114)
chr2 (218-275)||(23343778-23343835)
chr2 (221-266)||(42182614-42182659)
chr2 (221-269)||(8669195-8669243)
chr2 (225-269)||(9540336-9540380)
chr2 (221-269)||(12725614-12725662)
chr2 (225-269)||(15902885-15902929)
chr2 (225-269)||(22301873-22301917)
chr2 (223-275)||(24754995-24755047)
chr2 (225-269)||(29513150-29513194)
chr2 (221-260)||(8542547-8542586)
chr2 (221-260)||(11007245-11007284)
chr2 (225-260)||(16692977-16693012)
chr2 (222-269)||(29559420-29559467)
chr2 (211-269)||(18174104-18174162)
chr2 (221-279)||(24933831-24933889)
chr2 (227-269)||(27177917-27177959)
chr2 (223-276)||(24121291-24121344)
chr2 (221-269)||(15774207-15774255)
chr2 (212-276)||(19918712-19918776)
chr2 (221-269)||(23856640-23856688)
chr2 (225-269)||(26752726-26752770)
chr2 (226-274)||(34812860-34812908)
chr2 (221-265)||(38361076-38361120)
[»] scaffold0176 (1 HSPs)
scaffold0176 (221-276)||(26589-26644)
[»] scaffold0093 (1 HSPs)
scaffold0093 (221-280)||(23728-23787)
[»] scaffold2007 (1 HSPs)
scaffold2007 (222-276)||(748-802)
[»] scaffold0085 (4 HSPs)
scaffold0085 (227-269)||(22076-22118)
scaffold0085 (221-276)||(15020-15075)
scaffold0085 (221-260)||(15858-15897)
scaffold0085 (221-275)||(15080-15134)
[»] scaffold0504 (1 HSPs)
scaffold0504 (227-276)||(5385-5434)
[»] scaffold0096 (1 HSPs)
scaffold0096 (227-268)||(39901-39942)
[»] scaffold1213 (1 HSPs)
scaffold1213 (220-276)||(1893-1949)
[»] scaffold0002 (1 HSPs)
scaffold0002 (221-277)||(428901-428957)
[»] scaffold0418 (1 HSPs)
scaffold0418 (223-276)||(6886-6939)
[»] scaffold1207 (1 HSPs)
scaffold1207 (221-269)||(1591-1639)


Alignment Details
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 38056362 - 38056122
Alignment:
Q  13 aagaatattgaagaattagcatggaaagaatattgaagagtggatgtggctgagaattacaaagtttcgacgaactaatggcttgaagattcgttcaaat 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38056362 aagaatattgaagaattagcatggaaagaatattgaagagtggatgtggctgagaattacaaagtttcgacaaactaatggcttgaagattcgttcaaat 38056263  T
Q  113 taagcttttagtgaatatgtgatcaaaatcaagtataatcgcgcagtgaaaacaaatgtgagttgatttagtaaacaattataagcttttgattttaaaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||    
T  38056262 taagcttttagtgaatatgtgatcaaaatcaagtataatcgcgcagtgaaaacagatgtgagttgatttagtaaacaattataagcctttgatttttaaa 38056163  T
Q  213 aatagacagttgagatttggtatcaacgaatccgttgacac 253  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  38056162 aatagacggttgagatttggtatcaacgaatccgttgacac 38056122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 29046081 - 29046025
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  29046081 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactct 29046025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 6476790 - 6476849
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| || |||||||    
T  6476790 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgtctctctc 6476849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 235653 - 235596
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||    
T  235653 aaatagacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 19128832 - 19128767
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||| || ||| ||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  19128832 aaaataaacggttaagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 19128767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 28705878 - 28705933
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||||| || |||||||||||||||||||||||||| |||||||| ||||||    
T  28705878 gttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 28705933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 234747 - 234697
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  234747 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactct 234697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 29087975 - 29087921
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||| |||| ||||||||||||||||||||| |||||||| |||||||    
T  29087975 tgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactct 29087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 236919 - 236976
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| ||||||||||||| || ||||||||||||||||||||||| || |||||    
T  236919 aaatagacggttgagatttggtgtctacgaatccgttgacacctggtgtcaatggatc 236976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 237826 - 237875
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  237826 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 237875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 19359750 - 19359701
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  19359750 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 19359701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 4084932 - 4084876
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| ||||||||| |||||||||| ||||| |||||||| |||||||    
T  4084932 gttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatcctgactct 4084876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 7632143 - 7632099
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  7632143 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 7632099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 10554599 - 10554555
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  10554599 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacg 10554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 14478983 - 14478919
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||||| || | ||||||| |||||||||||||||||||||| ||| |||||||| |||||    
T  14478983 aaaatagacaattaaaatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgact 14478919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 27364486 - 27364534
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  27364486 gttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatc 27364534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 28705217 - 28705170
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    ||||||||||||| | |||||||||||||||||||||||| |||||||    
T  28705217 gttgagatttggtgtaaacgaatccgttgacacctggtgtcaacggat 28705170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 17071286 - 17071228
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||| ||| ||||||||    
T  17071286 aaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatc 17071228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 34600323 - 34600265
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||| ||| ||||||||    
T  34600323 aaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatc 34600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 19360481 - 19360530
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| ||||||||| |||||||||||||||| |||||||| ||||||    
T  19360481 atttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactc 19360530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 20854897 - 20854954
Alignment:
Q  214 atagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcat 271  Q
    |||||| ||| ||||||||| ||||||||||| || ||||||||||| ||||||||||    
T  20854897 atagacggttcagatttggtgtcaacgaatccattaacacctggtgtcaacggatcat 20854954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 1281884 - 1281840
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  1281884 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 1281840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 1283503 - 1283543
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||| |||||||||||||||||||||||||| ||||    
T  1283503 agatttggtgtcaacgaatccgttgacacctggtgtcaacg 1283543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 1554086 - 1554130
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  1554086 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 1554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 269
Target Start/End: Original strand, 1283533 - 1283572
Alignment:
Q  230 tggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  1283533 tggtgtcaacgaatccgttgacacctggtgtcaacggatc 1283572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 269
Target Start/End: Complemental strand, 10554565 - 10554526
Alignment:
Q  230 tggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||||||||||||||||||||| ||||||||    
T  10554565 tggtgtcaacgaatccgttgacacctggtgtcaacggatc 10554526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 25858257 - 25858214
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||    
T  25858257 gatttggtgtcaacgaatccgttgacacctagtgtcaacggatc 25858214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 17071783 - 17071841
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || |||| |||||||| ||||||||| |||| ||||||||||| ||||||||    
T  17071783 aaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatc 17071841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Original strand, 22799756 - 22799806
Alignment:
Q  218 acagttgagatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    |||||| ||||||||| ||||||||| | |||||||||||||| |||||||    
T  22799756 acagttaagatttggtgtcaacgaattcattgacacctggtgtcaacggat 22799806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 27363779 - 27363813
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgtt 261  Q
    ||||||| |||||||||||||||||||||||||||    
T  27363779 atttggtgtcaacgaatccgttgacacctggtgtt 27363813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 34709038 - 34709084
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  34709038 tgagatttggtgccaacgaatccgttgacacctggtgtcaacagatc 34709084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 36038745 - 36038699
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| | |||||||||||||| ||||||||| ||||||||    
T  36038745 tgagatttggtgttaacgaatccgttgatacctggtgtcaacggatc 36038699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 34600820 - 34600889
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    |||||| || |||| |||||||| ||||||||| |||| ||||||||||| || ||||| | ||||||||    
T  34600820 aaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaagggatcctaactctctc 34600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 22798949 - 22798905
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||| | | ||||||||    
T  22798949 agatttggtgtcaacgaatccgttgacacctgatatcaacggatc 22798905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 33005569 - 33005517
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||| || ||||||||| | ||||||| |||||| ||||||||||||||||    
T  33005569 agattttgtgtcaacgaattcattgacacttggtgtcaacggatcatgactct 33005517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 38056846 - 38056798
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||| ||||||| ||||| |||||||||||||||||||| ||| ||||    
T  38056846 gttgaaatttggtgtcaaccaatccgttgacacctggtgtcaacagatc 38056798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 4940042 - 4940273
Alignment:
Q  13 aagaatattgaagaattagcatggaaagaatattgaagagtggatgtggctgagaattacaaagtttcgacgaactaatggcttgaagattcgttcaaat 112  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4940042 aagaatattgaagaattagcatagaaagaatattaaagagtggatgtggctgagaattacaaagtt-cgacgaactaatggcctgaagattcgttcaaat 4940140  T
Q  113 taagcttttagtgaatatgtgatcaaaatcaagtataatcgcgcagtgaaaacaaatgtgagttgatttagtaaacaattataagcttttgattttaaaa 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  4940141 taagcttttagtgaatatgtgatcaaaatcaagtataatcgcgcagtgaaaacagatgtgagttgatttagtaaacaattataagcctttgattttaaaa 4940240  T
Q  213 aatagacagttgagatttggtatcaacgaatcc 245  Q
    ||||||| |||||||| |||| |||||| ||||    
T  4940241 aatagacggttgagatatggtgtcaacggatcc 4940273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 157 - 277
Target Start/End: Original strand, 11434392 - 11434512
Alignment:
Q  157 agtgaaaacaaatgtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctg 256  Q
    |||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||  ||    
T  11434392 agtgaaaacagatgtgagttgatttcgtaaacaattataagcctttgattttaaaaaatagaaggttgagatttggtgtcaacgaatccgttgacatttg 11434491  T
Q  257 gtgttaacggatcatgactct 277  Q
    ||||||||||||  |||||||    
T  11434492 gtgttaacggatactgactct 11434512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 277
Target Start/End: Original strand, 26529503 - 26529568
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  26529503 aaatagacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactct 26529568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 10171337 - 10171273
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  10171337 aaatagacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 10171273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 12344956 - 12344898
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||    
T  12344956 aaaatagacggttgagatttggtatcaacgaatctgttgacacctggtgtcaatggatc 12344898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 10171953 - 10172013
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  10171953 aaaaaagagacggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatc 10172013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 26528887 - 26528827
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  26528887 aaaaaagagacggttgagatttggtgtcaacgaatgcgttgacacctggtgtcaacggatc 26528827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 276
Target Start/End: Complemental strand, 19311056 - 19310998
Alignment:
Q  218 acagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||||||||||| ||||| |||||||| ||||||||||| |||||||| ||||||    
T  19311056 acagttgagatttggtgtcaacaaatccgttaacacctggtgtcaacggatcctgactc 19310998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 8488521 - 8488473
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||    
T  8488521 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 8488473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 19323766 - 19323814
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  19323766 gttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 19323814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 19323033 - 19322990
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacgg 266  Q
    ||||||||||| |||||||||||||||||||||||||| |||||    
T  19323033 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacgg 19322990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 19311830 - 19311880
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||| |||||    
T  19311830 agatttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgact 19311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 33436277 - 33436327
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||| |||||||||||||||||| ||||||| |||||||| |||||    
T  33436277 agatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgact 33436327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 9441287 - 9441230
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||| |||||| ||||||||||||||||||| |||| ||| || |||||||    
T  9441287 tgagatttggtgtcaacggatccgttgacacctggtgtcaacgaatcctgtctctctc 9441230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 18227783 - 18227729
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||| |||||||| |||||||||||||||||| ||||||| |||||||| ||||||    
T  18227783 gttgtgatttggtgtcaacgaatccgttgaca-ctggtgtcaacggatcctgactc 18227729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 33435395 - 33435344
Alignment:
Q  218 acagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| ||||||||| |||||||||||||| ||||| ||||| ||||||||    
T  33435395 acagttaagatttggtgtcaacgaatccgttaacaccaggtgtcaacggatc 33435344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 3623237 - 3623179
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||||||||||||| |||| |||| |||||||||||| ||| ||||||||    
T  3623237 aaaataaacggttgagatttggtgtcaaagaattcgttgacacctgatgtcaacggatc 3623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 8489284 - 8489334
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| | ||||||| |||||||||||||||| |||||||| ||||||    
T  8489284 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgactc 8489334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 5861938 - 5861894
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||||||| |||||||||| |||| |||||||||| ||||    
T  5861938 gttgagatttggtgtcaacgaatctgttggcacctggtgtcaacg 5861894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 3772476 - 3772574
Alignment:
Q  171 tgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  3772476 tgagttgatttcgtaaacaattattagcctttgattttaaaaaatagacggttgagatttggtgtcaacgaatacgttgacacctggtgtcaacggatc 3772574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 45931164 - 45931265
Alignment:
Q  168 atgtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgga 267  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||| |||  |||||||||||| |||||| |||||||||||  |||||||||||||    
T  45931164 atgtgagttgatttagtaaataattataagcttttgatttataaaaatggacgattgagatttggtgtcaacggatccgttgacatatggtgttaacgga 45931263  T
Q  268 tc 269  Q
    ||    
T  45931264 tc 45931265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 26636155 - 26636096
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||    
T  26636155 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactctctc 26636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 30661419 - 30661503
Alignment:
Q  185 aaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| ||||||||| |||||||  | |||||  || ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  30661419 aaactattataagcctttgattaaataaaatcaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 30661503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 37949693 - 37949609
Alignment:
Q  185 aaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| ||||||||| |||||||  | |||||  || ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  37949693 aaactattataagcctttgattaaataaaatcaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 37949609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 46428239 - 46428184
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  46428239 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 46428184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 7668534 - 7668480
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  7668534 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgact 7668480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 25599073 - 25599019
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  25599073 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 25599019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 25342549 - 25342501
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  25342549 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 25342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 25343355 - 25343307
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  25343355 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 25343307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 25343216 - 25343295
Alignment:
Q  198 cttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||||  ||||||| ||  ||||||||||||| ||||||||| | |||||||||||||| |||||||| |||||||    
T  25343216 cttttgattaaaaaaaattgatggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgactct 25343295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 26636860 - 26636914
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||    
T  26636860 gttgagatttggtgtcaacgaatccgttgacaccttgtgtcaacggatcctgact 26636914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 30660643 - 30660597
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  30660643 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 30660597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 37950469 - 37950515
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  37950469 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 37950515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 45099899 - 45099948
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  45099899 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 45099948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 13785597 - 13785641
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  13785597 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 13785641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 275
Target Start/End: Original strand, 18977720 - 18977823
Alignment:
Q  171 tgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatca 270  Q
    |||||| |||||  ||||||||| || |||| ||||  ||||||| ||  ||||||||||||| | |||||||||||||||||||||||| || |||||     
T  18977720 tgagttaatttaagaaacaattacaacctttggatta-aaaaaattgatggttgagatttggtgttaacgaatccgttgacacctggtgtcaatggatcc 18977818  T
Q  271 tgact 275  Q
    |||||    
T  18977819 tgact 18977823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 19067689 - 19067641
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  19067689 gttgagatttggtgtcaacgaatccgttgacacgtggtgtcaacggatc 19067641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 24389616 - 24389664
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  24389616 gttgagatttggtgtcaatgaatccgttgacacctggtgtcaacggatc 24389664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 27948498 - 27948450
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  27948498 gttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 27948450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 43065120 - 43065164
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  43065120 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 43065164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 45162024 - 45161973
Alignment:
Q  218 acagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||||||| |||||||||||||| ||||||||||| || |||||    
T  45162024 acagttgagatttggtgtcaacgaatccgttaacacctggtgtcaatggatc 45161973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 3028026 - 3027984
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaa 263  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  3028026 gttgagatttggtgtcaacgaattcgttgacacctggtgttaa 3027984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 46428819 - 46428873
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||| | ||||||||| |||||||||||||||| |||||||| |||||||    
T  46428819 tgagatttgatgtcaacgaattcgttgacacctggtgtcaacggatcctgactct 46428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 3903340 - 3903393
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||| ||||||| |||||| ||||||||||||||||||| |||||||| |||||    
T  3903340 ttgatatttggtgtcaacggatccgttgacacctggtgtcaacggatcctgact 3903393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 278
Target Start/End: Complemental strand, 40273612 - 40273555
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctc 278  Q
    ||||||||||||| ||||||||| | |||||||||||||| |||||||| | ||||||    
T  40273612 gttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctaactctc 40273555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 1417656 - 1417612
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  1417656 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 1417612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 3029198 - 3029246
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| ||||||||| |||||||||||||||| ||||||||    
T  3029198 gttgggatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 3029246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 16664125 - 16664173
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  16664125 gttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatc 16664173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 17638485 - 17638533
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  17638485 gttgagatttagtgtcaacggatccgttgacacctggtgtcaacggatc 17638533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 19068395 - 19068443
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||| ||||||| ||||||||| |||||||||||||||| ||||||||    
T  19068395 gttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatc 19068443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 21496983 - 21497031
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||||||    
T  21496983 gttgagatttggtgtcaacgaattcgttgacacctgttgtcaacggatc 21497031  T

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Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 38225979 - 38226023
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  38225979 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 38226023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 47719708 - 47719752
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  47719708 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 47719752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 24719386 - 24719339
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| ||||||| |||||||||||||||||| ||||||| ||||||||    
T  24719386 ttgatatttggtgtcaacgaatccgttgacatctggtgtcaacggatc 24719339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 31278159 - 31278202
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||    
T  31278159 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatc 31278202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 3219536 - 3219594
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || |||||||||| || ||||||||| |||| |||||| |||||||||||||    
T  3219536 aaaataaacggttgagattttgtgtcaacgaattcgttaacacctagtgttaacggatc 3219594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 14686181 - 14686135
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| ||||| ||||||||||||| |||||| ||||||||    
T  14686181 tgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatc 14686135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 37395505 - 37395547
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| | |||||||||||||||||||||||| ||||||||    
T  37395505 atttggtgttaacgaatccgttgacacctggtgtcaacggatc 37395547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 38225347 - 38225297
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| | |||| || |||||||||||||||| |||||||||||||||    
T  38225347 gatttggtgttaacggattcgttgacacctggtgtcaacggatcatgactc 38225297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 25599821 - 25599874
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| |||| |||||  |||||||||||||| |||||||| ||||||    
T  25599821 tgagatttggtgtcaatgaatctattgacacctggtgtcaacggatcctgactc 25599874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 3688432 - 3688388
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||| | ||||||| ||||||||    
T  3688432 agatttggtgtcaacgaatccgttgatatctggtgtcaacggatc 3688388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 14305138 - 14305094
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||| |||||||||||||||| |||| ||||||||    
T  14305138 agatttggtgtcaatgaatccgttgacacctagtgtcaacggatc 14305094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 24453730 - 24453770
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||| ||||| |||||||||||||||||||| ||||    
T  24453730 agatttggtgtcaacaaatccgttgacacctggtgtcaacg 24453770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 263
Target Start/End: Complemental strand, 31277469 - 31277433
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaa 263  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  31277469 atttggtgtcaacgaattcgttgacacctggtgttaa 31277433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 37706480 - 37706424
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||| ||||||| | |||||||||||||| ||||||||| || ||||| |||||||    
T  37706480 gttgaaatttggtgttaacgaatccgttgatacctggtgtcaatggatcctgactct 37706424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 8238 - 8339
Alignment:
Q  168 atgtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgga 267  Q
    ||||||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||| || |||    
T  8238 atgtgagttgatttcataaacaattattagcctttgattttaaaaaatagacggttgagatttggtgttaacgaatacgttgacacctggtgtcaatgga 8337  T
Q  268 tc 269  Q
    ||    
T  8338 tc 8339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 276
Target Start/End: Original strand, 53148559 - 53148666
Alignment:
Q  168 atgtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgga 267  Q
    ||||||||| ||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||| ||| || |||    
T  53148559 atgtgagttaatttagtaagcaattataagcctttgattt-aaaaaatagacggttgagatttggtgtcaacgaatctgttgacacctgatgtcaatgga 53148657  T
Q  268 tcatgactc 276  Q
    || ||||||    
T  53148658 tcctgactc 53148666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 47785799 - 47785858
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  47785799 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacagatcctgactctctc 47785858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 47688469 - 47688527
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  47688469 aaaataaacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 47688527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 53732498 - 53732440
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||    
T  53732498 aaaatagacggttgagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 53732440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 8248510 - 8248575
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||||| ||||||    
T  8248510 aaaatagacggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactc 8248575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 8266175 - 8266240
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||||| ||||||    
T  8266175 aaaatagacggttaagatttggtgtcaacgaatccgttgacatctggtgtcaacggatcctgactc 8266240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 30573688 - 30573765
Alignment:
Q  200 tttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||  ||| ||| ||| ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||    
T  30573688 tttgattaaaaacaatcgacggttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactct 30573765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 9365222 - 9365166
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||    
T  9365222 gttgagatttggtgtcaacaaattcgttgacacctggtgttaacggatcctgactct 9365166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 20774180 - 20774235
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||||| ||||||    
T  20774180 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactc 20774235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 8247759 - 8247693
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||| ||| |||||| || |||||||||||||||||||| ||||| |||||||| |||||||    
T  8247759 aaaatagacggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactct 8247693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 2444419 - 2444366
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||| |||||||||||||||||||||||||| |||||||| | ||||||||    
T  2444419 atttggtgtcaacgaatccgttgacacctggtgtcaacggatcctaactctctc 2444366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 7841880 - 7841811
Alignment:
Q  185 aaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacc 254  Q
    |||||||||||  |||| ||||| | |||||||| |||||||||||||| ||||||||| ||||||||||    
T  7841880 aaacaattatagtctttggatttaataaaatagatagttgagatttggtgtcaacgaattcgttgacacc 7841811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 16903643 - 16903687
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  16903643 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacg 16903687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 24374842 - 24374786
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| ||||||||| |||||||| ||||||| |||||||| |||||||    
T  24374842 gttgagatttggtgtcaacgaattcgttgacagctggtgtcaacggatcctgactct 24374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 26147032 - 26147080
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  26147032 gttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 26147080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 32089601 - 32089661
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| | || |||||||||||||||||| |||||||| ||||||| ||||||||    
T  32089601 aaaaaatagacggatgtgatttggtatcaacgaattcgttgacatctggtgtcaacggatc 32089661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 56262543 - 56262483
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||| ||||||||||||| ||||||||| | |||||||||||||| ||||||||    
T  56262543 aaaatatagacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatc 56262483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 599302 - 599349
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  599302 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatc 599349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 40348143 - 40348194
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatg 272  Q
    ||||||||||||||| ||||||| | |||||||||||||| |||||||||||    
T  40348143 gttgagatttggtattaacgaattcattgacacctggtgtcaacggatcatg 40348194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 52871346 - 52871303
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| |||||||||||||||||||||||||| ||||||||    
T  52871346 gatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 52871303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 268
Target Start/End: Complemental strand, 55976215 - 55976172
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  55976215 agatttggtgtcaacgaatccgttgacacctggtgtcaacggat 55976172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 8265424 - 8265366
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||| |||||| || |||||||||||||||||||| ||||| ||||||||    
T  8265424 aaaatagacggttaagattttgtgtcaacgaatccgttgacaccaggtgtcaacggatc 8265366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 267
Target Start/End: Original strand, 9365804 - 9365862
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgga 267  Q
    ||||||| ||| |||| |||||||| |||| ||||||||||||||||||||| ||||||    
T  9365804 aaaaaattgacggttgtgatttggtgtcaatgaatccgttgacacctggtgtcaacgga 9365862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 31329722 - 31329772
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| | |||||||||||||||||||||||| |||||||| ||||||    
T  31329722 gatttggtgttaacgaatccgttgacacctggtgtcaacggatcctgactc 31329772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 268
Target Start/End: Complemental strand, 53733179 - 53733125
Alignment:
Q  214 atagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    |||||| ||||||||||||||||||||||| |||| ||| ||||||| |||||||    
T  53733179 atagacggttgagatttggtatcaacgaattcgttaacagctggtgtcaacggat 53733125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 53772854 - 53772812
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  53772854 atttggtgtcaacgaatccgttgacacctggtgtcaacggatc 53772812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 55001430 - 55001488
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||| |||||| || |||||||||||||||||||||||||| ||||||||    
T  55001430 aaaataaacggttaagatttagtgtcaacgaatccgttgacacctggtgtcaacggatc 55001488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 5046047 - 5046002
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctg 256  Q
    |||||| || ||||||||||||| ||||||||||||||||||||||    
T  5046047 aaaataaacggttgagatttggtgtcaacgaatccgttgacacctg 5046002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 7841595 - 7841542
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  7841595 tgagatttggtgtcaacgaatccgttaacacctgatgtcaacggatcctgactc 7841542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 44469540 - 44469491
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||| ||||||||| |||||||||||||||| | ||||||||||||    
T  44469540 gatttggtgtcaacgaattcgttgacacctggtgtcatcggatcatgact 44469491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 11938764 - 11938716
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  11938764 gttgagatttggtgtcaacgaattcgttgacacctggtgtgaacagatc 11938716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 19080438 - 19080390
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||| ||||    
T  19080438 gttgaaatttggtgtcaacgaatccgttgacacctggtgtcaacagatc 19080390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 53733722 - 53733770
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    |||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  53733722 aaatagatggttgaaatttggtgtcaacgaatccgttgacacctggtgt 53733770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 53773590 - 53773634
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||    
T  53773590 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatc 53773634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 3654520 - 3654563
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| ||||||||||||||||||||||| || ||||||||    
T  3654520 gatttggtgtcaacgaatccgttgacacctggcgtcaacggatc 3654563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 24158824 - 24158875
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| |||||||||| ||||||||||||||| || ||||| ||||||    
T  24158824 agatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgactc 24158875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 42882686 - 42882729
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| |||||||||||||||||| ||||||| ||||||||    
T  42882686 gatttggtgtcaacgaatccgttgacatctggtgtcaacggatc 42882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 55976959 - 55976994
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||| ||||||||||||||||||||||||||    
T  55976959 agatttggtgtcaacgaatccgttgacacctggtgt 55976994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 2446163 - 2446209
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| | |||||||| ||||||||||||||| ||||||||    
T  2446163 tgagatttggtgttaacgaatctgttgacacctggtgtcaacggatc 2446209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Original strand, 16903677 - 16903723
Alignment:
Q  230 tggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||| |||||||||||||||||||||||||| |||| ||| ||||||    
T  16903677 tggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactc 16903723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 19550333 - 19550291
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||||||||||||||||||||||||| || |||||    
T  19550333 atttggtgtcaacgaatccgttgacacctggtgtcaagggatc 19550291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 43146650 - 43146692
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||||| |||| ||||||||||||||||||||| ||||    
T  43146650 tgagatttggtgtcaaggaatccgttgacacctggtgtcaacg 43146692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 47687972 - 47687914
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || |||| |||||||| ||||||||| |||| ||||||||||| ||||||||    
T  47687972 aaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatc 47687914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 260
Target Start/End: Original strand, 56263022 - 56263111
Alignment:
Q  170 gtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    |||||| ||||||  |||||||||| | |||| ||||  |||| |||||| ||||||||||||| | |||| || ||||||||||||||||    
T  56263022 gtgagtagatttaacaaacaattatgaactttggatta-aaaatatagacggttgagatttggtgtaaacggattcgttgacacctggtgt 56263111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Original strand, 7842520 - 7842577
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||  ||||||||||||| ||||||||| |||||||||||| ||| || |||||    
T  7842520 aaatagatggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatc 7842577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 40495146 - 40495093
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||| |||||| |||||||||  ||||||||||||||| |||||||| ||||||    
T  40495146 tgaggtttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactc 40495093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 1465373 - 1465317
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||| |||||| | |||| ||||| ||||||||||||||| |||||||| |||||||    
T  1465373 gttgtgatttgatgtcaatgaatctgttgacacctggtgtcaacggatcctgactct 1465317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 1866396 - 1866348
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| | ||||||||| |||| ||||||||    
T  1866396 gttgagatttggtgtcaacgaattcattgacacctagtgtcaacggatc 1866348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 11939441 - 11939489
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||| || |||||||||||||||||||  ||||| ||||||||    
T  11939441 gttgagatttcgtgtcaacgaatccgttgacactaggtgtcaacggatc 11939489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 24551927 - 24551971
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||| |||||||||||||||||||| || |||||    
T  24551927 agatttggtgtcaacaaatccgttgacacctggtgtcaatggatc 24551971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 26159621 - 26159669
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| ||||||||||||||||||| || ||| ||||||||    
T  26159621 gttgcgatttggtgtcaacgaatccgttgacacttgatgtcaacggatc 26159669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 32088867 - 32088835
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggt 258  Q
    |||||||| ||||||||||||||||||||||||    
T  32088867 gatttggtgtcaacgaatccgttgacacctggt 32088835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 53147924 - 53147876
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| |||||||||||||||||| ||||||| || |||||    
T  53147924 gttgggatttggtgtcaacgaatccgttgacatctggtgtcaatggatc 53147876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 55000736 - 55000692
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||| ||||||| || |||||    
T  55000736 agatttggtgtcaacgaatccgttgacatctggtgtcaatggatc 55000692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 44699965 - 44699881
Alignment:
Q  170 gtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacc 254  Q
    |||||||||||||||||| ||||||||||  |||||||| |||||||||| ||||||||||||| ||||||||||||||||||||    
T  44699965 gtgagttgatttagtaaataattataagccattgatttttaaaaatagacggttgagatttggtgtcaacgaatccgttgacacc 44699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 52266441 - 52266508
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||    
T  52266441 aaaaaatagacggttgagatttggtgtcaacgaattcgttaacacctggtgttaacggatcctgactc 52266508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 265099 - 265152
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  265099 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcatgact 265152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 46150729 - 46150785
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| ||||||||||||||||||||| |||| |||||||| |||||||    
T  46150729 gttgagatttggtgtcaacgaatccgttgacacctagtgtcaacggatcctgactct 46150785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 31974715 - 31974656
Alignment:
Q  210 aaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||  ||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  31974715 aaaaatagatggttgagatttggtgtcaacgaatccgttgacacttggtgtcaacggatc 31974656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 48413407 - 48413333
Alignment:
Q  185 aaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    |||||||||| ||| |||||||  ||||||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  48413407 aaacaattattagcctttgattg-aaaaaattgacggttgtgatttggtgtcaacgaatccgttgacacctggtgt 48413333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 48507020 - 48507091
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    |||| |||||| ||||||||||||| ||||||||| | |||||||||||||| |||||||| || |||||||    
T  48507020 aaaatatagacggttgagatttggtgtcaacgaattcattgacacctggtgtcaacggatcctgtctctctc 48507091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 48648252 - 48648201
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  48648252 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 48648201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 14871204 - 14871150
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||    
T  14871204 tgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactct 14871150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 17605768 - 17605715
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    |||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||    
T  17605768 aaatagacggttgaaatttggtgtcaacgaatccgttgacacctggtgtcaacg 17605715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 17603217 - 17603173
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  17603217 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 17603173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 21727533 - 21727577
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  21727533 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 21727577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 31114994 - 31114943
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||| |||||    
T  31114994 gttgagatttggtatcaacgaatccgttgacac---gtgttaacggatcctgact 31114943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 41458086 - 41458030
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| |||||||||||||||||||||||| | |||| ||| |||||||    
T  41458086 gttgagatttggtgtcaacgaatccgttgacacctggtatcaacgaatcctgactct 41458030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 268
Target Start/End: Complemental strand, 981720 - 981673
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  981720 gttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggat 981673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 45081403 - 45081458
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||||||    
T  45081403 gttgagatttggtgtcaacgaatccgttgacactaggtgtcaacggatcctgactc 45081458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 55373712 - 55373762
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||| |||||||||||||||||||||||||| |||| ||| |||||||    
T  55373712 atttggtgtcaacgaatccgttgacacctggtgtcaacgaatcctgactct 55373762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 11652341 - 11652296
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcat 271  Q
    |||||||| |||||||||||||||||||||| |||||| |||||||    
T  11652341 gatttggtgtcaacgaatccgttgacacctgatgttaatggatcat 11652296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 30222104 - 30222157
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||||||||||  |||||||||||||| |||| ||| ||||||||||    
T  30222104 atttggtatcaacgaatctattgacacctggtgtcaacgaatcctgactctctc 30222157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 37520561 - 37520614
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgac 274  Q
    ||||||||||||| ||||||||| |||||||||||||| | |||||||| ||||    
T  37520561 gttgagatttggtgtcaacgaattcgttgacacctggtatcaacggatcctgac 37520614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 37988220 - 37988273
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| ||||||||| |||||||||||||||| || ||||| ||||||    
T  37988220 tgagatttggtgtcaacgaattcgttgacacctggtgtcaatggatcctgactc 37988273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 52605489 - 52605538
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| ||||| |||||||||||||||| |||||||| ||||||    
T  52605489 atttggtatcatcgaattcgttgacacctggtgtcaacggatcctgactc 52605538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 48764551 - 48764475
Alignment:
Q  200 tttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||  ||| ||| ||| ||||||||||||| ||||||||| |||||||||||| ||| || ||||| ||||||    
T  48764551 tttgattaaaaacaatcgacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaatggatcctgactc 48764475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 10847914 - 10847957
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  10847914 gatttggtgtcaatgaatctgttgacacctggtgttaacggatc 10847957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 13477778 - 13477817
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  13477778 gttgagatttggtgtcaacgaattcgttgacacctggtgt 13477817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 17603965 - 17604000
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||| ||||||||||||||||||||||||||    
T  17603965 agatttggtgtcaacgaatccgttgacacctggtgt 17604000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 20213536 - 20213587
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||| ||||||||| ||| |||||||||||| |||||||| |||||||    
T  20213536 gatttggtgtcaacgaattcgtcgacacctggtgtcaacggatcctgactct 20213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 31115600 - 31115647
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||| |||||||||| |||||||||| |||| ||||||||    
T  31115600 ttgagatttggtgtcaacgaatctgttgacacctagtgtcaacggatc 31115647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 48506502 - 48506440
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatg 272  Q
    |||| |||||| ||||||||||||| ||||||||| ||||||||||  |||| |||||||||||    
T  48506502 aaaatatagacggttgagatttggtgtcaacgaattcgttgacacc-agtgtcaacggatcatg 48506440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 52282400 - 52282459
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    ||||||| ||| ||||  ||||||| |||| ||||||||||||||||||||| |||||||    
T  52282400 aaaaaattgacggttgtaatttggtgtcaatgaatccgttgacacctggtgtcaacggat 52282459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 13477105 - 13477055
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| |||| |||| |||||||||||||||| |||||||| ||||||    
T  13477105 gatttggtgtcaatgaattcgttgacacctggtgtcaacggatcctgactc 13477055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 20213028 - 20212986
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  20213028 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 20212986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 37987280 - 37987238
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| ||||||||||| |||||||||||||| ||||||||    
T  37987280 atttggtgtcaacgaatccattgacacctggtgtcaacggatc 37987238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 40872814 - 40872856
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||    
T  40872814 atttggtgtcaatgaatccgttgacacctggtgtcaacggatc 40872856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 48765074 - 48765124
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||| ||||||||||| |||||||||||||| || ||||| |||||    
T  48765074 agatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgact 48765124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 51827498 - 51827548
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||||  ||||||||||||||||||| ||||| |||||||| |||||    
T  51827498 agatttggtgacaacgaatccgttgacaccaggtgtcaacggatcttgact 51827548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 52281819 - 52281761
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctct 279  Q
    |||||||| |||| |||||||||||||||||||| ||| | |||||||  |||||||||    
T  52281819 gttgagatctggtgtcaacgaatccgttgacaccaggtatcaacggattctgactctct 52281761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 29856683 - 29856716
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacc 254  Q
    ||||||||||||| ||||||||||||||||||||    
T  29856683 gttgagatttggtgtcaacgaatccgttgacacc 29856716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 44699826 - 44699859
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||| ||||||||||||||||||||||||||    
T  44699826 atttggtgtcaacgaatccgttgacacctggtgt 44699859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 48649177 - 48649226
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgac 274  Q
    ||||||||| |||||||||| ||||||||||||||| || ||||| ||||    
T  48649177 agatttggtgtcaacgaatctgttgacacctggtgtcaatggatcctgac 48649226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 46149678 - 46149634
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||||| |||||||||||||| || |||||    
T  46149678 agatttggtgtcaacgaatccattgacacctggtgtcaatggatc 46149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 51469283 - 51469327
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||||||||||||| || ||| ||||||||    
T  51469283 agatttggtgtcaacgaatccgttgacacttgatgtcaacggatc 51469327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 269
Target Start/End: Original strand, 3291483 - 3291581
Alignment:
Q  168 atgtgagttgatttagtaaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgga 267  Q
    |||||||||||||| ||||| |||||| ||| |||||||||||||||||||| ||||||||||||| |   ||||| |||||||| ||||||| ||| ||    
T  3291483 atgtgagttgatttcgtaaataattattagcctttgattttaaaaaatagacggttgagatttggtgt---cgaatacgttgacatctggtgtcaacaga 3291579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 26654367 - 26654432
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| ||| ||||||||| ||||||||||| |||||||||||||| |||||||| ||||||    
T  26654367 aaaatagacggttaagatttggtgtcaacgaatccattgacacctggtgtcaacggatcttgactc 26654432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 41974691 - 41974638
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  41974691 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 41974638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 38576301 - 38576349
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  38576301 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 38576349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 22320437 - 22320368
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    |||||||||  || ||||||||| |||||||||||||||||||||||  | |||||||| ||||||||||    
T  22320437 aaaatagacgattaagatttggtgtcaacgaatccgttgacacctggcatcaacggatcctgactctctc 22320368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 276
Target Start/End: Original strand, 3165125 - 3165176
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||    
T  3165125 agatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactc 3165176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 31641560 - 31641505
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||| ||||||||||| |||||||||||||| || ||||| ||||||||||    
T  31641560 agatttggtgtcaacgaatccattgacacctggtgtcaatggatcctgactctctc 31641505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Original strand, 8373698 - 8373748
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||| ||||||||||||||||||| |||||| |||||||| |||||||    
T  8373698 atttggtgtcaacgaatccgttgacacttggtgtcaacggatcctgactct 8373748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 31602075 - 31602021
Alignment:
Q  215 tagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||| ||||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  31602075 tagacggttgagatttggtgtcaacgaattcgttgacacctggtgtcaaccgatc 31602021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 275
Target Start/End: Complemental strand, 37064900 - 37064815
Alignment:
Q  189 aattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||| |||||||||||  ||||||| ||| |||| |||||||| |||| |||| |||||||||||||||| ||| |||| |||||    
T  37064900 aattattagcttttgatta-aaaaaattgacggttgtgatttggtgtcaatgaattcgttgacacctggtgtcaacagatcctgact 37064815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 37732872 - 37732823
Alignment:
Q  228 tttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||| |||||||||||||||||||| ||||| |||||||| |||||||    
T  37732872 tttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactct 37732823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 8298309 - 8298265
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctg 256  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||    
T  8298309 aaatagacggttgagatttggtgtcaacgaatccgttaacacctg 8298265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 276
Target Start/End: Original strand, 31642065 - 31642141
Alignment:
Q  200 tttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||  ||| ||| ||| ||||||||||||| ||||||||| |||||||| ||||||| || ||||| ||||||    
T  31642065 tttgattaaaaacaatcgacggttgagatttggtgtcaacgaattcgttgacatctggtgtcaatggatcctgactc 31642141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 32414527 - 32414571
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||    
T  32414527 agatttggtgtcaacgaatccgttgacacctggtgtcaacagatc 32414571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 8996973 - 8997028
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| ||||| |||| ||||||||||||| | |||||||| ||||||    
T  8996973 gttgagatttggtgtcaacaaatcagttgacacctggtatcaacggatcctgactc 8997028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 8372960 - 8372918
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||    
T  8372960 atttggtgtcaacgaatccgttgacaccaggtgtcaacggatc 8372918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 9197143 - 9197101
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    |||||||| ||||||||| |||||||||||||||| |||||||    
T  9197143 gatttggtgtcaacgaattcgttgacacctggtgtcaacggat 9197101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 11686275 - 11686241
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtg 259  Q
    ||||||||| |||||||||||||||||||||||||    
T  11686275 agatttggtgtcaacgaatccgttgacacctggtg 11686241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 26652341 - 26652291
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| | ||||||| |||||||||||||||| |||||||| ||||||    
T  26652341 gatttggtgttaacgaattcgttgacacctggtgtcaacggatcctgactc 26652291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 32979828 - 32979882
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    |||||||| | ||| ||| |||||||||||||||| |||||||| ||||||||||    
T  32979828 gatttggtgttaacaaattcgttgacacctggtgtcaacggatcctgactctctc 32979882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 38628328 - 38628258
Alignment:
Q  196 agcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacgg 266  Q
    ||||||||||   |||||||| || ||| |||||| || |||||||||||||||| ||||||||| |||||    
T  38628328 agcttttgatcaaaaaaaataaacggttaagattttgtgtcaacgaatccgttgatacctggtgtcaacgg 38628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 45907 - 45967
Alignment:
Q  209 aaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||| ||||| ||||||| ||||||||| | |||||||||||||  ||||||||    
T  45907 aaaatatagacggttgatatttggtgtcaacgaattcattgacacctggtgccaacggatc 45967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 27441515 - 27441471
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| | ||||||||| |||||||||||||||| ||||||||    
T  27441515 agatttgatgtcaacgaattcgttgacacctggtgtcaacggatc 27441471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 28929894 - 28929850
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||| ||||||| || |||||    
T  28929894 agatttggtgtcaacgaatccgttgacatctggtgtcaatggatc 28929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 37025058 - 37025011
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||||    
T  37025058 gttgagatttggtgtcaacgaatctgttgaca-ctggtgtcaacggatc 37025011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 277
Target Start/End: Original strand, 13263491 - 13263572
Alignment:
Q  196 agcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||| || |  |||||| ||||||||||||| ||||||||||| |||||||||||||| |||||||| |||||||    
T  13263491 agcttttgattatagactatagacggttgagatttggtgtcaacgaatccattgacacctggtgtcaacggatcctgactct 13263572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 46812180 - 46812231
Alignment:
Q  214 atagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  46812180 atagacggttgagatttggtgtcaacgaatccgttgacacctggtgttaacg 46812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 277
Target Start/End: Original strand, 25469090 - 25469142
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| |||||||    
T  25469090 agatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactct 25469142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 277
Target Start/End: Complemental strand, 30663410 - 30663354
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  30663410 gttgagatttggtgtcaacgaatccgttgatacctggtgtcaacggatcctgactct 30663354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 34309230 - 34309278
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  34309230 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 34309278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 4433848 - 4433895
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||    
T  4433848 ttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 4433895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Original strand, 30663976 - 30664031
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||    
T  30663976 gttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatcctgactc 30664031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 49680861 - 49680815
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  49680861 tgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 49680815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 37853141 - 37853190
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  37853141 atttggtgtcaacgaatccgttgacacctgatgttaacggatcctgactc 37853190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 7406310 - 7406242
Alignment:
Q  208 taaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||| |||||  ||||||||||||| ||||||||| |||| ||||||||||| |||||||| ||||||    
T  7406310 taaaagatagagggttgagatttggtgtcaacgaattcgttaacacctggtgtcaacggatcctgactc 7406242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 10121552 - 10121600
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  10121552 gttgagatttggtgtcaaccaatccgttgacacctggtgtcaacggatc 10121600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 13262885 - 13262837
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  13262885 gttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 13262837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 200 - 276
Target Start/End: Complemental strand, 25468583 - 25468507
Alignment:
Q  200 tttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||  ||| ||| ||| ||||||||||||| |||| ||||||||||||||||||||| || ||||| ||||||    
T  25468583 tttgattaaaaacaatcgacggttgagatttggtgtcaatgaatccgttgacacctggtgtcaatggatcctgactc 25468507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 28181593 - 28181537
Alignment:
Q  213 aatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||||||    
T  28181593 aatagacggttgagatttggtgtcaacgaattcgttgacaccaggtgtcaacggatc 28181537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 30932795 - 30932843
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  30932795 gttgagatttggtgccaacgaatccgttgacacctggtgtcaacggatc 30932843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 4439207 - 4439254
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  4439207 ttgagatttggtgtcaacgaatccgttgacaccaggtgtcaacggatc 4439254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 8987842 - 8987787
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||| |||| ||||||    
T  8987842 gttgagatttggtgtcaacgaatccgttgacacctgatgtcaaccgatcctgactc 8987787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 34308525 - 34308466
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||| ||||||| ||||||||| |||||||||||||||| |||||||| || |||||||    
T  34308525 gttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatcctgtctctctc 34308466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 7559201 - 7559247
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  7559201 tgagatttggtgtcaacggatccgttgacacctggtgtcaacggatc 7559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 19172580 - 19172630
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||| |||||||||||||||||||||||||| || ||||| ||||||    
T  19172580 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatcctgactc 19172630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 28182062 - 28182120
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||| ||||||||| |||| ||||||||||||||||||||| ||| ||||    
T  28182062 aaaatagacggttaagatttggtgtcaaagaatccgttgacacctggtgtcaacagatc 28182120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 168942 - 168894
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||| ||||||| ||||||||||||| ||||||||    
T  168942 gttgagatttggtgtcaatgaatccgctgacacctggtgtcaacggatc 168894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 8988548 - 8988596
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||| ||||||||||||||||||||| | ||||||    
T  8988548 gttgagatttggtgtcaaggaatccgttgacacctggtgtcagcggatc 8988596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 27256712 - 27256760
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||| ||||||| ||||||||| |||||||||||||||| ||||||||    
T  27256712 gttgaaatttggtgtcaacgaatacgttgacacctggtgtcaacggatc 27256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 275
Target Start/End: Complemental strand, 36389837 - 36389773
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||| || |||||||||| ||| | |||||||||||||| ||||| |||||||| |||||    
T  36389837 aaaatagacggtcgagatttggtgtcagcaaatccgttgacaccaggtgtcaacggatcctgact 36389773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 47967910 - 47967866
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  47967910 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 47967866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 10120830 - 10120787
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| ||||| |||||||||||||||||||| ||||||||    
T  10120830 gatttggtgtcaaccaatccgttgacacctggtgtcaacggatc 10120787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Complemental strand, 11548851 - 11548804
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| || |||||||||| ||||||||||||||| ||||||||    
T  11548851 ttgagatttagtgtcaacgaatctgttgacacctggtgtcaacggatc 11548804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 17172667 - 17172710
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||  |||||||||||||||||||||||||| ||||||||    
T  17172667 gatttggcgtcaacgaatccgttgacacctggtgtcaacggatc 17172710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 24992017 - 24991974
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||| |||||||||||||||||||||||||| || |||||    
T  24992017 gatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 24991974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 258
Target Start/End: Complemental strand, 32038535 - 32038492
Alignment:
Q  215 tagacagttgagatttggtatcaacgaatccgttgacacctggt 258  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  32038535 tagacggttgagatttggtgtcaacgaattcgttgacacctggt 32038492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 7558499 - 7558453
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| ||||| ||||||||||||| |||||| ||||||||    
T  7558499 tgagatttggtgtcaacaaatccgttgacacttggtgtcaacggatc 7558453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 269
Target Start/End: Original strand, 11704810 - 11704856
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||| ||||||||||||||||||| |||||| || |||||    
T  11704810 tgagatttggtgtcaacgaatccgttgacacttggtgtcaatggatc 11704856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 17171977 - 17171935
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||    
T  17171977 atttggtgtcaacgaattcgttgacacctggtgtcaacggatc 17171935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 45818067 - 45818025
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||| ||||||||||||||||||||| ||||||||    
T  45818067 atttggtgtcaatgaatccgttgacacctggtgtcaacggatc 45818025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 46391880 - 46391914
Alignment:
Q  235 tcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||||||||||||||||| ||||||||    
T  46391880 tcaacgaatccgttgacacctggtgtcaacggatc 46391914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 256
Target Start/End: Complemental strand, 23026645 - 23026600
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctg 256  Q
    |||||| | |||||||||||| | ||||||||||||||||||||||    
T  23026645 aaaataaatagttgagatttgatgtcaacgaatccgttgacacctg 23026600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 169627 - 169675
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||  ||| |||||||||||||||| ||||||||    
T  169627 gttgagatttggtgtcaataaattcgttgacacctggtgtcaacggatc 169675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 280
Target Start/End: Original strand, 22560530 - 22560626
Alignment:
Q  184 taaacaattataagcttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||| ||| |||||||||||||  | | |||  || ||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||    
T  22560530 taaactattgtaagcttttgattaaatataatgtacggttgagatttggtgtcaacgaatccgttgacacctgatgtcaacggatcctgactctctc 22560626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 1296455 - 1296376
Alignment:
Q  198 cttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||||  ||||||| ||  ||||||||||||| ||||||||| |||||||||||||||| |||||||| |||||||    
T  1296455 cttttgattaaaaaaaattgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactct 1296376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 276
Target Start/End: Original strand, 9276306 - 9276384
Alignment:
Q  198 cttttgattttaaaaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||||  ||||||| ||  ||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||    
T  9276306 cttttgattaaaaaaaattgatggttgagatttggtgtcaacgaattcgttgacacctggtgtcaacggatcctgactc 9276384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 1297122 - 1297170
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  1297122 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 1297170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 9275639 - 9275591
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  9275639 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 9275591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 29719499 - 29719451
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  29719499 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaacggatc 29719451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 36237684 - 36237626
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctct 279  Q
    ||||| ||||||| |||| ||||||||||||||||||||| |||||||| |||||||||    
T  36237684 gttgaaatttggtgtcaatgaatccgttgacacctggtgtcaacggatcctgactctct 36237626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 40252070 - 40252025
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcat 271  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||    
T  40252070 gatttggtgtcaacgaatccgttgacacctggtgttaatggatcat 40252025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 11750310 - 11750262
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||    
T  11750310 gttgagatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 11750262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 29512433 - 29512369
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||  |||||||||||| ||||| ||| |||||||||| ||||| |||||||||||||||    
T  29512433 aaatagactattgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatcatgactc 29512369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 18174659 - 18174717
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||| ||| ||||||||    
T  18174659 aaaataaacggttgagatttggtgtcaacgaattcgttgacacctgatgtcaacggatc 18174717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 42459114 - 42459048
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    |||||||||  |||||||||| | |||||||||| ||||||||||||||| || ||||| |||||||    
T  42459114 aaaatagacgattgagatttgatgtcaacgaatctgttgacacctggtgtcaatggatcctgactct 42459048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 23343835 - 23343778
Alignment:
Q  218 acagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    |||||||||||||| | |||||||||||||||||| ||||||| ||| |||| |||||    
T  23343835 acagttgagatttgatgtcaacgaatccgttgacatctggtgtcaacagatcctgact 23343778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 42182614 - 42182659
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacgg 266  Q
    ||||||||||||| ||||||||||| |||||||||||||| |||||    
T  42182614 gttgagatttggtgtcaacgaatcccttgacacctggtgtcaacgg 42182659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 8669195 - 8669243
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| |||||||||| ||||||||||||||||||| ||||    
T  8669195 gttgggatttggtgtcaacgaatctgttgacacctggtgttaacagatc 8669243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 9540380 - 9540336
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  9540380 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 9540336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 12725614 - 12725662
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| ||||| |||||||||||||||||||| ||||||||    
T  12725614 gttgggatttggtgtcaacaaatccgttgacacctggtgtcaacggatc 12725662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 15902885 - 15902929
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || |||||||||||||||||||||||||| ||||||||    
T  15902885 agattttgtgtcaacgaatccgttgacacctggtgtcaacggatc 15902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 22301873 - 22301917
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  22301873 agatttggtgtcaacgaattcgttgacacctggtgtcaacggatc 22301917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 24754995 - 24755047
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||||| ||||||||||  |||||||||||||| |||||||| |||||    
T  24754995 tgagatttggtttcaacgaatcaattgacacctggtgtcaacggatcctgact 24755047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 29513150 - 29513194
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||| |||||||||||||||||||||||||| || |||||    
T  29513150 agatttggtgtcaacgaatccgttgacacctggtgtcaatggatc 29513194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 8542547 - 8542586
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  8542547 gttgagatttggtgtcaacgaatccgttgacacctagtgt 8542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 260
Target Start/End: Complemental strand, 11007284 - 11007245
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  11007284 gttgagatttagtgtcaacgaatccgttgacacctggtgt 11007245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 16692977 - 16693012
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||| ||||||||||||||||||||||||||    
T  16692977 agatttggtgtcaacgaatccgttgacacctggtgt 16693012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 222 - 269
Target Start/End: Original strand, 29559420 - 29559467
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||||||||| ||||||||| |||||||||||||||| ||| ||||    
T  29559420 ttgagatttggtgtcaacgaattcgttgacacctggtgtcaacagatc 29559467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 269
Target Start/End: Complemental strand, 18174162 - 18174104
Alignment:
Q  211 aaaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||||| || |||| |||||||| ||||||||| |||| ||||||||||| ||||||||    
T  18174162 aaaataaacggttgcgatttggtgtcaacgaattcgttaacacctggtgtcaacggatc 18174104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 24933889 - 24933831
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctct 279  Q
    ||||||||||||| |||| |||| |||||||||| ||||| |||||||| || ||||||    
T  24933889 gttgagatttggtgtcaatgaattcgttgacaccaggtgtcaacggatcctgtctctct 24933831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 27177959 - 27177917
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||    
T  27177959 atttggtgtcaacgaattcgttgacacctggtgtcaacggatc 27177917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 24121291 - 24121344
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||| |||| ||||| ||||||||||||||| || ||||| ||||||    
T  24121291 tgagatttggtctcaatgaatctgttgacacctggtgtcaatggatcctgactc 24121344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 15774255 - 15774207
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||| ||| |||||||||| ||||| ||||||||    
T  15774255 gttgagatttggtgtcaacaaattcgttgacaccaggtgtcaacggatc 15774207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 19918712 - 19918776
Alignment:
Q  212 aaatagacagttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||  ||||||||||| | |||||||||||||||||| | | ||| |||||||| ||||||    
T  19918712 aaatagaaggttgagatttgatgtcaacgaatccgttgacatcagatgtcaacggatcctgactc 19918776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 23856688 - 23856640
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||||||||| ||||  |||||||||||||| ||||| ||||||||    
T  23856688 gttgagatttggtgtcaatcaatccgttgacaccaggtgtcaacggatc 23856640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 26752726 - 26752770
Alignment:
Q  225 agatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| | ||||||||| |||||||||||||||| ||||||||    
T  26752726 agatttgatgtcaacgaattcgttgacacctggtgtcaacggatc 26752770  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 34812860 - 34812908
Alignment:
Q  226 gatttggtatcaacgaatccgttgacacctggtgttaacggatcatgac 274  Q
    |||||||| | |||||||||||||||| ||||||| |||||||| ||||    
T  34812860 gatttggtgttaacgaatccgttgacaactggtgtcaacggatcctgac 34812908  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 38361120 - 38361076
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacg 265  Q
    ||||||||||||| ||||||||| |||||||||||| ||| ||||    
T  38361120 gttgagatttggtgtcaacgaattcgttgacacctgatgtcaacg 38361076  T

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Target: scaffold0176 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 26644 - 26589
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||    
T  26644 gttgtgatttggtgtcaacgaatccgttgacacctggtgtcaacggatcctgactc 26589  T

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Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 280
Target Start/End: Original strand, 23728 - 23787
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactctctc 280  Q
    ||||||||||||| |||||||||||||||||| ||||||| || ||||| | ||||||||    
T  23728 gttgagatttggtgtcaacgaatccgttgacaactggtgtcaatggatcctaactctctc 23787  T

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Target: scaffold2007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 276
Target Start/End: Complemental strand, 802 - 748
Alignment:
Q  222 ttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||||||||||| |||||||||||||||| ||||||||| || ||||| ||||||    
T  802 ttgagatttggtgtcaacgaatccgttgaaacctggtgtcaatggatcctgactc 748  T

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Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 4)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 22076 - 22118
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  22076 atttggtgtcaacgaatccgttgacacctggtgtcaacggatc 22118  T

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Target: scaffold0085; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 276
Target Start/End: Complemental strand, 15075 - 15020
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||||||||| |||| ||||||||||||||  ||||| |||||||| ||||||    
T  15075 gttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgactc 15020  T

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Target: scaffold0085; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 15858 - 15897
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgt 260  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  15858 gttgagatttggtgtcaacgaattcgttgacacctggtgt 15897  T

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Target: scaffold0085; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 15134 - 15080
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgact 275  Q
    ||||||||||||| |||| ||||||||||||||  ||||| |||||||| |||||    
T  15134 gttgagatttggtgtcaatgaatccgttgacactaggtgtcaacggatcctgact 15080  T

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Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 5385 - 5434
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||||| ||||| |||||||||||||||||||| |||||||| ||||||    
T  5385 atttggtgtcaacaaatccgttgacacctggtgtcaacggatcctgactc 5434  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 39942 - 39901
Alignment:
Q  227 atttggtatcaacgaatccgttgacacctggtgttaacggat 268  Q
    ||||||| |||||||||||||||||||||||||| |||||||    
T  39942 atttggtgtcaacgaatccgttgacacctggtgtcaacggat 39901  T

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Target: scaffold1213 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 1949 - 1893
Alignment:
Q  220 agttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    ||||| |||||||| |||||||||||||||||| ||| ||| |||||||| ||||||    
T  1949 agttgtgatttggtgtcaacgaatccgttgacatctgctgtcaacggatcttgactc 1893  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 428901 - 428957
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactct 277  Q
    ||||||||||||| ||||||||| |||||| ||| ||||| |||||||| |||||||    
T  428901 gttgagatttggtgtcaacgaattcgttgataccgggtgtcaacggatcctgactct 428957  T

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Target: scaffold0418 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 6886 - 6939
Alignment:
Q  223 tgagatttggtatcaacgaatccgttgacacctggtgttaacggatcatgactc 276  Q
    |||| |||||| |||||||||  ||||||||||||||| |||||||| ||||||    
T  6886 tgaggtttggtgtcaacgaatttgttgacacctggtgtcaacggatcctgactc 6939  T

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Target: scaffold1207 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 1639 - 1591
Alignment:
Q  221 gttgagatttggtatcaacgaatccgttgacacctggtgttaacggatc 269  Q
    |||| |||||||| ||||||||| |||||||||||||||| ||| ||||    
T  1639 gttgggatttggtgtcaacgaattcgttgacacctggtgtcaaccgatc 1591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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