View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2742_low_22 (Length: 330)
Name: NF2742_low_22
Description: NF2742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2742_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 93 - 313
Target Start/End: Original strand, 34513617 - 34513835
Alignment:
| Q |
93 |
tctgatttcagaatcagaagctaatcaatcattaaaaaatccagagaaacgcaagaacacagttgaatacataaaaataacgatttaaagttaggtttag |
192 |
Q |
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| T |
34513617 |
tctgatttcagaatcagaagctaatcaatcattaaaaaatccagagaaacggaagaacacagttgaatacataaaaataacgatttaaagttaggtttag |
34513716 |
T |
|
| Q |
193 |
ggttttgaaacaaaacaacgtaccaatcaaatnnnnnnnnngaaaagagggaaatcagaaccaaggaggttccatgaaaatgaataagaaaatcgaagaa |
292 |
Q |
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|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34513717 |
ggttttgaaacaaaacaacgtaccaatcaaataaaaaaaaag--aagagggaaatcagaaccaaggaggttccatgaaaatgaataagaaaatcgaagaa |
34513814 |
T |
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| Q |
293 |
tctcaaattagggtttggaaa |
313 |
Q |
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||||||||||||||||||||| |
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| T |
34513815 |
tctcaaattagggtttggaaa |
34513835 |
T |
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