View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2742_low_33 (Length: 256)
Name: NF2742_low_33
Description: NF2742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2742_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 33718784 - 33719019
Alignment:
| Q |
1 |
ttcaacaagttgtctgttagtcatggaaggtaatttaatggtagctaggtggtagctgttgagcattcatgtgtataatgttgtggtatcaagaaatttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
33718784 |
ttcaacaagttgtctgttagtcatggaaggtaatttaatggtagctaggtggtagctgttgagcattcatgtgtttaatgttgtggtatcaagaaatttt |
33718883 |
T |
|
| Q |
101 |
acctaactatgtagttgagtgcctgaaagtttaaaccccacaacctcctcttacccaccaagattagtatttatctattctcatcaactcttgcatgatg |
200 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33718884 |
acctaactatgtagttgagtgcctgaaagtttaaaacccacaacctcctcttacccaccaagattagtatttatctattctcatcaactcttgcatgatg |
33718983 |
T |
|
| Q |
201 |
aattttagggaaaatgtggtgtgggcactatataag |
236 |
Q |
| |
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|||||||||||||||||||||||||||||||||||| |
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| T |
33718984 |
aattttagggaaaatgtggtgtgggcactatataag |
33719019 |
T |
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