View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2743_high_5 (Length: 289)
Name: NF2743_high_5
Description: NF2743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2743_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 22 - 273
Target Start/End: Original strand, 43648040 - 43648291
Alignment:
| Q |
22 |
gtacatgtatctccacatccaccggttcaacatactcctccatcaccatcacatccttcccctattcaatataattnnnnnnnaccaccaccacctcttg |
121 |
Q |
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| T |
43648040 |
gtacatgtatctccacatccaccggttcaacatactcctccatcaccatcacatccttcccctattcaatataattcccccccaccaccaccaccccttg |
43648139 |
T |
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| Q |
122 |
ttcattacatttacaattcaccgccgccaccaacattaccgcctcctccaccacctgcccctgcatatggagggccattgccacctatcgttggactccc |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43648140 |
ttcattacatttacaattcaccgccgccaccaacattaccgcctcctccaccaccttcccctgcatatggagggccattgccacctatcgttggactccc |
43648239 |
T |
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| Q |
222 |
atacgcttcgcctccaccacctcctttctattaattcttttgatatcttatc |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
43648240 |
atacgcttcgcctccaccacctcctttctattaattctttttatatcttatc |
43648291 |
T |
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