View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2743_low_3 (Length: 402)
Name: NF2743_low_3
Description: NF2743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2743_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 392
Target Start/End: Original strand, 22049647 - 22050023
Alignment:
| Q |
18 |
gcaacaatgctacaaattaattgaaaagagtaaggaactactacactagcatcttcttcaccaaaagactaagaaagttacacacaatgttatttgagaa |
117 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
22049647 |
gcaacaatgctacaaattaattgaaaagagtaaggaactactacactagcatctt---caccaaaagactaagaaagttacacacaatgttatttgagaa |
22049743 |
T |
|
| Q |
118 |
tgaaaatcaattgagcattgaatcttctgctttgtcatcgaagagtttctttgcagctttagtgaacagattatgagcctg-caaaaaatagtataagtt |
216 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||| |
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| T |
22049744 |
tgaaaatcatttgagcattgaatcttctgctttgtcatcgaagagtttctttgcagctttagtgaacagattatgagcctgccaaaaagtagtagaagtt |
22049843 |
T |
|
| Q |
217 |
agaattttgttcatatttttagaactaaagtagattttcaacttaaa--tttattatgattatatatgtagtaat-atacctgcttcaaagagagaccaa |
313 |
Q |
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||||||||||||| |||||||||| |||| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
22049844 |
agaattttgttcacatttttagaattaaactagattttcaacttaaaatttcattatgattatatatgtagtaataatacctgcttcaaagagagaccaa |
22049943 |
T |
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| Q |
314 |
tcttctccagatcacttaactgcaacatgc-caaaaaattgcatcaccaaaagcattatgaggaactaattgtatctgtg |
392 |
Q |
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|||||||||| |||| |||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
22049944 |
tcttctccaggtcacataactgtaacatgcgggaaaaaatgcatcaccaaaagcattatgaggaactaattgtatctgtg |
22050023 |
T |
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