View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2745_high_1 (Length: 859)

Name: NF2745_high_1
Description: NF2745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2745_high_1
NF2745_high_1
[»] chr8 (1 HSPs)
chr8 (24-841)||(4764337-4765154)


Alignment Details
Target: chr8 (Bit Score: 789; Significance: 0; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 789; E-Value: 0
Query Start/End: Original strand, 24 - 841
Target Start/End: Complemental strand, 4765154 - 4764337
Alignment:
Q  24 actagtattgtagaatataattatttttaaaaaattaccgaaagtaaagaagcaagtgttggaaaactctgagttgatgagtacttttatacaactgatt 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4765154 actagtattgtagaatataattatttttaaaaaattaccgaaagtaaagaagaaagtgttggaaaactctgagttgatgagtacttttatacaactgatt 4765055  T
Q  124 acaaatgcatccttatttattacacataataaataacctgctgtggtatatcagaattggctactgcataacctgcaatatttacaatgggaaaaggtgg 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4765054 acaaatgcatccttatttattacacataataaataacctgctgtggtatatcagaattggctactgcataacctgcaatatttacagtgggaaaaggtgg 4764955  T
Q  224 taannnnnnnctaaattaagttaaaatgaactatatgatgatgatcttctatttaataaaggtttaggaggagtttcactagaagtggagtcttttaaag 323  Q
    |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764954 taatttttttctaaattaagttaaaatgaactatatgatgatgatcttctatttaataaaggtttaggaggagtttcactagaagtggagtcttttaaag 4764855  T
Q  324 cttcagcatatttgatcaaattagatttctctgaggcataagaatctgagaaagactgagtgataaatttcaaatctcccgcgacacttttccttcgacc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764854 cttcagcatatttgatcaaattagatttctctgaggcataagaatctgagaaagactgagtgataaatttcaaatctcccgcgacacttttccttcgacc 4764755  T
Q  424 gaaattctttaagcttccaacatcagaatttctcctagtctcttccttcaaacttaatgtactgtttaaatcaatagaattttgagacatgtcggtgaga 523  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764754 gaaattctttaagcttccaacatcagaatttctcctagtctcttccttcaaacttaatgtactgtttaaatcaatagaattttgagacatgtcggtgaga 4764655  T
Q  524 gtttcatactcacttttaagaccatcgttaatgctatcttctctagatctagatttttctacagatgtaacactaccactgagatgattgctactatctt 623  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764654 gtttcatactcacttttaagaccatcgttaatgctatcttctctagatctagatttttctacagatgtaacactaccactgagatgattgctactatctt 4764555  T
Q  624 ttcctcttatcagtttcataagttttccgaagatcttggacttgtttttggcattgttgactcgtgcatcggacggattttcaagaggagaataatcatc 723  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764554 ttcctcttatcagtttcataagttttccgaagatcttggacttgtttttggcattgttgactcgtgcatcggacggattttcaagaggagaataatcatc 4764455  T
Q  724 actgtcaccaggatctgttacataagaagaagctcgtgaggaggaccattgatcagaatcaaaatcagaaatgcttgttcttccttcagcatttgcatat 823  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4764454 actgtcaccaggatctgttacataagaagaagctcgtgaggaggaccattgatcagaatcaaaatcagaaatgcttgttcttccttcagcatttgcatat 4764355  T
Q  824 tcaagtataagctgctta 841  Q
    ||||||||||||||||||    
T  4764354 tcaagtataagctgctta 4764337  T

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