View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2746_high_22 (Length: 296)

Name: NF2746_high_22
Description: NF2746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2746_high_22
NF2746_high_22
[»] chr6 (41 HSPs)
chr6 (58-166)||(10265438-10265545)
chr6 (166-296)||(26463178-26463308)
chr6 (166-294)||(13379783-13379911)
chr6 (167-294)||(12407508-12407635)
chr6 (164-279)||(679863-679978)
chr6 (166-296)||(28498324-28498454)
chr6 (166-282)||(30337448-30337564)
chr6 (161-275)||(3059576-3059690)
chr6 (166-279)||(681044-681157)
chr6 (157-286)||(8089433-8089562)
chr6 (167-296)||(30337717-30337846)
chr6 (167-295)||(15116532-15116660)
chr6 (164-296)||(33517833-33517965)
chr6 (166-296)||(29810735-29810865)
chr6 (166-296)||(30726058-30726188)
chr6 (165-294)||(20651948-20652077)
chr6 (165-282)||(21628026-21628143)
chr6 (167-296)||(26464498-26464627)
chr6 (166-279)||(33647267-33647380)
chr6 (166-294)||(8090228-8090356)
chr6 (164-296)||(17734193-17734325)
chr6 (170-282)||(33517537-33517649)
chr6 (169-296)||(11434804-11434931)
chr6 (167-282)||(30725760-30725874)
chr6 (170-296)||(30804160-30804286)
chr6 (166-279)||(20651009-20651122)
chr6 (165-296)||(21627711-21627842)
chr6 (156-282)||(12080625-12080751)
chr6 (166-279)||(12080952-12081065)
chr6 (168-233)||(17734525-17734590)
chr6 (170-282)||(3059260-3059372)
chr6 (166-274)||(12408492-12408600)
chr6 (167-279)||(15115339-15115451)
chr6 (173-296)||(13378531-13378654)
chr6 (157-279)||(22617873-22617996)
chr6 (161-282)||(30803855-30803976)
chr6 (174-278)||(33646970-33647074)
chr6 (246-281)||(1215180-1215215)
chr6 (194-237)||(3176386-3176429)
chr6 (193-282)||(24210557-24210646)
chr6 (165-233)||(11393166-11393234)
[»] chr7 (60 HSPs)
chr7 (166-296)||(20425477-20425607)
chr7 (166-296)||(5457206-5457336)
chr7 (157-282)||(17102010-17102135)
chr7 (166-283)||(20426642-20426759)
chr7 (167-281)||(43123175-43123289)
chr7 (165-281)||(13384500-13384616)
chr7 (166-282)||(28469321-28469437)
chr7 (167-282)||(10935794-10935909)
chr7 (168-282)||(6253472-6253586)
chr7 (165-282)||(19204487-19204604)
chr7 (166-233)||(27396957-27397024)
chr7 (159-282)||(27991731-27991854)
chr7 (167-281)||(18670177-18670291)
chr7 (155-233)||(32298765-32298843)
chr7 (168-282)||(32299018-32299132)
chr7 (165-282)||(6571011-6571128)
chr7 (169-282)||(24388821-24388934)
chr7 (159-279)||(10936110-10936230)
chr7 (186-286)||(18855963-18856063)
chr7 (163-282)||(22871590-22871709)
chr7 (175-274)||(30128668-30128767)
chr7 (167-282)||(42731419-42731534)
chr7 (163-233)||(6253802-6253872)
chr7 (166-296)||(17102288-17102418)
chr7 (170-296)||(27992007-27992133)
chr7 (164-218)||(34793901-34793955)
chr7 (164-233)||(24389147-24389216)
chr7 (168-233)||(42019598-42019663)
chr7 (166-275)||(48788802-48788911)
chr7 (165-233)||(2640176-2640244)
chr7 (167-278)||(2640495-2640607)
chr7 (157-233)||(27396619-27396695)
chr7 (167-295)||(42362450-42362578)
chr7 (167-274)||(13386068-13386175)
chr7 (166-281)||(17886804-17886919)
chr7 (166-233)||(28105500-28105567)
chr7 (165-296)||(28469008-28469139)
chr7 (168-282)||(23181307-23181421)
chr7 (163-233)||(37656848-37656918)
chr7 (166-219)||(29144358-29144411)
chr7 (166-286)||(18855409-18855529)
chr7 (167-279)||(40380000-40380112)
chr7 (166-278)||(45010921-45011033)
chr7 (167-286)||(18087647-18087766)
chr7 (162-233)||(40379764-40379835)
chr7 (168-218)||(34799535-34799585)
chr7 (199-281)||(43124466-43124548)
chr7 (164-277)||(32687394-32687507)
chr7 (192-296)||(17885653-17885757)
chr7 (164-215)||(30127438-30127489)
chr7 (170-233)||(42019959-42020022)
chr7 (165-215)||(29141556-29141606)
chr7 (167-233)||(33808323-33808389)
chr7 (167-233)||(37657199-37657265)
chr7 (157-218)||(1960252-1960313)
chr7 (192-229)||(16804011-16804048)
chr7 (165-218)||(32053141-32053194)
chr7 (192-281)||(32688532-32688621)
chr7 (166-215)||(42731799-42731848)
chr7 (169-233)||(19204820-19204884)
[»] chr5 (72 HSPs)
chr5 (166-282)||(5993888-5994004)
chr5 (166-282)||(13962863-13962979)
chr5 (170-282)||(35512151-35512263)
chr5 (169-282)||(39453302-39453415)
chr5 (164-279)||(11761746-11761861)
chr5 (166-233)||(20814497-20814564)
chr5 (167-282)||(27587148-27587263)
chr5 (162-296)||(11762016-11762150)
chr5 (164-282)||(24547438-24547556)
chr5 (164-233)||(42265732-42265801)
chr5 (165-233)||(17202397-17202465)
chr5 (167-282)||(3529155-3529270)
chr5 (166-233)||(20840799-20840866)
chr5 (166-233)||(21265504-21265571)
chr5 (166-296)||(14194422-14194552)
chr5 (164-233)||(5024380-5024449)
chr5 (167-296)||(30096841-30096970)
chr5 (164-296)||(3528870-3529002)
chr5 (157-217)||(6150444-6150504)
chr5 (165-233)||(18670200-18670268)
chr5 (157-233)||(19892670-19892746)
chr5 (168-282)||(18247087-18247199)
chr5 (170-233)||(21257523-21257586)
chr5 (158-281)||(24141443-24141566)
chr5 (166-233)||(28770868-28770935)
chr5 (165-296)||(39453598-39453729)
chr5 (166-296)||(28269421-28269551)
chr5 (165-282)||(16157168-16157285)
chr5 (167-296)||(27587414-27587543)
chr5 (169-278)||(35512431-35512540)
chr5 (166-279)||(42067840-42067953)
chr5 (165-233)||(18247438-18247506)
chr5 (166-282)||(38475312-38475428)
chr5 (164-296)||(40150113-40150245)
chr5 (164-296)||(43159113-43159245)
chr5 (169-296)||(16082979-16083106)
chr5 (167-278)||(17202716-17202827)
chr5 (166-233)||(20840532-20840599)
chr5 (166-233)||(24547176-24547243)
chr5 (167-282)||(35920497-35920612)
chr5 (163-217)||(16083321-16083375)
chr5 (167-233)||(28771200-28771266)
chr5 (167-296)||(186718-186847)
chr5 (167-296)||(33871339-33871468)
chr5 (166-279)||(37991198-37991311)
chr5 (172-296)||(8322703-8322827)
chr5 (166-274)||(29646361-29646469)
chr5 (170-282)||(32242245-32242357)
chr5 (168-296)||(35920229-35920357)
chr5 (170-233)||(13362590-13362653)
chr5 (165-296)||(32242541-32242671)
chr5 (165-296)||(40148896-40149027)
chr5 (166-296)||(6150719-6150849)
chr5 (170-296)||(11047736-11047861)
chr5 (169-279)||(19892310-19892420)
chr5 (166-296)||(20814135-20814264)
chr5 (193-282)||(186445-186534)
chr5 (159-296)||(11741816-11741953)
chr5 (167-215)||(5024019-5024067)
chr5 (168-296)||(16156856-16156984)
chr5 (192-296)||(20152806-20152910)
chr5 (170-273)||(5835748-5835851)
chr5 (174-233)||(24204960-24205018)
chr5 (164-215)||(27937379-27937430)
chr5 (167-278)||(38475033-38475144)
chr5 (205-283)||(42063292-42063370)
chr5 (161-274)||(5835617-5835730)
chr5 (170-215)||(11740690-11740735)
chr5 (157-218)||(13963206-13963267)
chr5 (168-233)||(19517969-19518034)
chr5 (164-213)||(37992670-37992719)
chr5 (168-213)||(38442449-38442494)
[»] chr2 (48 HSPs)
chr2 (166-281)||(25231162-25231277)
chr2 (166-296)||(44045301-44045431)
chr2 (165-282)||(15848086-15848203)
chr2 (163-296)||(36755387-36755520)
chr2 (164-296)||(37895344-37895476)
chr2 (167-294)||(25230102-25230229)
chr2 (163-233)||(36382489-36382559)
chr2 (166-282)||(11163336-11163452)
chr2 (156-296)||(44713784-44713924)
chr2 (164-275)||(6589679-6589790)
chr2 (168-282)||(2318160-2318273)
chr2 (164-238)||(45556109-45556183)
chr2 (153-233)||(10713085-10713165)
chr2 (164-296)||(16099323-16099455)
chr2 (165-277)||(28230057-28230169)
chr2 (164-296)||(36480017-36480149)
chr2 (165-281)||(44044112-44044228)
chr2 (193-296)||(3653379-3653481)
chr2 (167-238)||(39423515-39423586)
chr2 (170-279)||(6588686-6588795)
chr2 (167-296)||(6658146-6658275)
chr2 (164-233)||(45556409-45556478)
chr2 (164-224)||(3555247-3555307)
chr2 (166-282)||(6657877-6657993)
chr2 (164-296)||(13692519-13692650)
chr2 (166-282)||(44714074-44714189)
chr2 (167-282)||(16099055-16099170)
chr2 (167-233)||(11163054-11163120)
chr2 (157-282)||(39498302-39498425)
chr2 (164-217)||(2318888-2318941)
chr2 (167-296)||(9076366-9076495)
chr2 (169-233)||(36479719-36479784)
chr2 (167-275)||(3556329-3556437)
chr2 (166-274)||(28228669-28228777)
chr2 (166-282)||(36382160-36382276)
chr2 (170-282)||(37895660-37895772)
chr2 (166-274)||(39498600-39498708)
chr2 (253-296)||(11349504-11349547)
chr2 (166-233)||(39423877-39423944)
chr2 (166-296)||(15848387-15848517)
chr2 (166-296)||(39936546-39936675)
chr2 (164-281)||(202670-202787)
chr2 (166-295)||(43741976-43742105)
chr2 (165-229)||(34447811-34447875)
chr2 (192-296)||(41587260-41587363)
chr2 (167-278)||(22051310-22051421)
chr2 (167-233)||(30729621-30729687)
chr2 (166-296)||(34448094-34448224)
[»] chr1 (81 HSPs)
chr1 (167-282)||(34849011-34849126)
chr1 (167-282)||(34850378-34850493)
chr1 (165-294)||(46899901-46900030)
chr1 (167-282)||(6367562-6367677)
chr1 (163-282)||(25647880-25647999)
chr1 (166-296)||(6367861-6367991)
chr1 (158-293)||(17691210-17691345)
chr1 (166-245)||(35473630-35473709)
chr1 (165-282)||(26024421-26024538)
chr1 (167-296)||(26024691-26024820)
chr1 (166-282)||(19017942-19018058)
chr1 (166-282)||(19515818-19515934)
chr1 (166-278)||(30711644-30711756)
chr1 (162-282)||(40772502-40772622)
chr1 (157-296)||(183211-183350)
chr1 (167-278)||(34464449-34464560)
chr1 (167-294)||(46899061-46899188)
chr1 (164-282)||(40210683-40210801)
chr1 (157-279)||(43759138-43759260)
chr1 (169-281)||(40439503-40439615)
chr1 (166-238)||(23209684-23209756)
chr1 (166-282)||(34464762-34464878)
chr1 (166-282)||(47999405-47999521)
chr1 (164-279)||(1103777-1103892)
chr1 (163-294)||(5735012-5735143)
chr1 (165-296)||(17661850-17661980)
chr1 (159-282)||(24009854-24009977)
chr1 (170-277)||(37578195-37578302)
chr1 (166-233)||(41098732-41098799)
chr1 (164-282)||(17662163-17662281)
chr1 (166-282)||(183504-183621)
chr1 (167-296)||(31197065-31197189)
chr1 (167-296)||(32917559-32917688)
chr1 (160-224)||(7231620-7231684)
chr1 (166-282)||(35152342-35152458)
chr1 (157-233)||(35152692-35152768)
chr1 (166-278)||(36694565-36694677)
chr1 (166-278)||(36710666-36710778)
chr1 (167-279)||(47999123-47999235)
chr1 (166-233)||(5734009-5734075)
chr1 (166-233)||(36694281-36694348)
chr1 (166-233)||(36710382-36710449)
chr1 (171-278)||(41099050-41099157)
chr1 (163-282)||(42248469-42248588)
chr1 (163-233)||(7820950-7821020)
chr1 (168-282)||(13914380-13914494)
chr1 (176-282)||(14878980-14879086)
chr1 (163-233)||(40435341-40435411)
chr1 (174-296)||(49723025-49723147)
chr1 (160-241)||(8898510-8898591)
chr1 (165-238)||(37578549-37578622)
chr1 (164-233)||(40772821-40772890)
chr1 (170-233)||(17692547-17692610)
chr1 (167-218)||(24009575-24009626)
chr1 (167-282)||(30711327-30711442)
chr1 (171-282)||(1103463-1103576)
chr1 (168-282)||(4960541-4960655)
chr1 (164-218)||(51019726-51019780)
chr1 (164-233)||(7821316-7821384)
chr1 (166-278)||(1841458-1841570)
chr1 (186-278)||(10304172-10304264)
chr1 (165-233)||(19017627-19017695)
chr1 (246-282)||(22103819-22103855)
chr1 (192-276)||(30326521-30326605)
chr1 (165-281)||(32132302-32132418)
chr1 (164-296)||(40210367-40210499)
chr1 (170-278)||(46163033-46163141)
chr1 (166-218)||(51015632-51015684)
chr1 (166-233)||(13914067-13914134)
chr1 (192-278)||(17188979-17189065)
chr1 (252-282)||(19227047-19227077)
chr1 (156-214)||(23209352-23209408)
chr1 (166-279)||(32133239-32133353)
chr1 (168-233)||(13300266-13300331)
chr1 (161-214)||(19322886-19322939)
chr1 (192-245)||(48691173-48691226)
chr1 (192-233)||(48779103-48779144)
chr1 (192-296)||(20760802-20760906)
chr1 (251-279)||(21444678-21444706)
chr1 (167-215)||(26234430-26234478)
chr1 (170-214)||(42533027-42533071)
[»] chr4 (82 HSPs)
chr4 (156-278)||(18831338-18831460)
chr4 (159-281)||(55867428-55867550)
chr4 (166-282)||(13058036-13058152)
chr4 (166-282)||(50418950-50419066)
chr4 (157-296)||(50418658-50418797)
chr4 (166-296)||(24349673-24349803)
chr4 (164-282)||(24711108-24711226)
chr4 (164-281)||(32063650-32063767)
chr4 (166-279)||(39539234-39539347)
chr4 (161-296)||(51692818-51692953)
chr4 (166-279)||(34765379-34765492)
chr4 (164-296)||(1179099-1179231)
chr4 (166-282)||(7451833-7451949)
chr4 (166-282)||(10781797-10781913)
chr4 (166-282)||(34765693-34765809)
chr4 (165-281)||(40388420-40388536)
chr4 (166-282)||(44967351-44967467)
chr4 (168-296)||(49879208-49879336)
chr4 (163-278)||(11448046-11448161)
chr4 (167-233)||(147319-147385)
chr4 (161-279)||(24350748-24350866)
chr4 (164-274)||(43155526-43155636)
chr4 (167-296)||(7452102-7452231)
chr4 (165-282)||(23613307-23613424)
chr4 (169-278)||(37248238-37248347)
chr4 (164-296)||(13058281-13058413)
chr4 (166-282)||(43155809-43155925)
chr4 (164-296)||(46661213-46661345)
chr4 (166-282)||(51692552-51692668)
chr4 (167-294)||(55866111-55866236)
chr4 (166-233)||(24411710-24411777)
chr4 (170-233)||(37248567-37248630)
chr4 (168-279)||(52909254-52909365)
chr4 (167-233)||(18831679-18831745)
chr4 (166-296)||(29321204-29321334)
chr4 (166-296)||(41582446-41582576)
chr4 (166-279)||(148071-148184)
chr4 (165-238)||(5368945-5369018)
chr4 (165-282)||(14801734-14801851)
chr4 (168-233)||(15507674-15507739)
chr4 (165-282)||(40387465-40387582)
chr4 (159-224)||(48528477-48528542)
chr4 (169-233)||(17356284-17356348)
chr4 (166-278)||(24711397-24711509)
chr4 (170-278)||(35028001-35028109)
chr4 (166-282)||(41583544-41583660)
chr4 (169-233)||(44967071-44967135)
chr4 (166-237)||(37976511-37976582)
chr4 (170-233)||(54086698-54086761)
chr4 (165-275)||(10780711-10780821)
chr4 (165-275)||(10974320-10974430)
chr4 (167-233)||(23613640-23613706)
chr4 (193-274)||(10203647-10203728)
chr4 (166-282)||(36009126-36009243)
chr4 (193-278)||(39667091-39667176)
chr4 (169-233)||(16006155-16006219)
chr4 (165-233)||(17355923-17355991)
chr4 (169-232)||(24411360-24411423)
chr4 (166-233)||(36008843-36008910)
chr4 (175-282)||(49879489-49879596)
chr4 (172-238)||(16005843-16005909)
chr4 (166-236)||(35508599-35508669)
chr4 (166-296)||(52909552-52909682)
chr4 (164-282)||(53129819-53129937)
chr4 (164-233)||(1178054-1178122)
chr4 (192-281)||(8438306-8438394)
chr4 (167-296)||(14802034-14802163)
chr4 (193-281)||(8439538-8439626)
chr4 (169-233)||(15508035-15508098)
chr4 (165-281)||(30642460-30642576)
chr4 (205-281)||(40316977-40317053)
chr4 (205-281)||(40327051-40327127)
chr4 (158-238)||(50750878-50750958)
chr4 (169-233)||(53701814-53701878)
chr4 (169-233)||(54087057-54087121)
chr4 (167-281)||(30641520-30641632)
chr4 (164-281)||(11446267-11446384)
chr4 (165-218)||(35028375-35028428)
chr4 (167-279)||(5369183-5369295)
chr4 (192-296)||(10408186-10408290)
chr4 (164-212)||(53129503-53129551)
chr4 (164-236)||(53702158-53702229)
[»] chr8 (54 HSPs)
chr8 (165-281)||(20386744-20386860)
chr8 (166-282)||(23663827-23663943)
chr8 (167-281)||(2535864-2535978)
chr8 (166-282)||(23698557-23698673)
chr8 (167-282)||(39071676-39071791)
chr8 (166-279)||(8316904-8317017)
chr8 (167-279)||(38955988-38956100)
chr8 (169-296)||(12272920-12273047)
chr8 (167-294)||(20385568-20385695)
chr8 (165-296)||(38862862-38862993)
chr8 (166-296)||(12198949-12199079)
chr8 (166-296)||(12443377-12443507)
chr8 (167-296)||(23698308-23698438)
chr8 (167-282)||(36928479-36928591)
chr8 (158-282)||(4994970-4995093)
chr8 (159-279)||(40318280-40318400)
chr8 (167-282)||(38955703-38955818)
chr8 (167-281)||(2534695-2534809)
chr8 (166-296)||(34060488-34060618)
chr8 (166-296)||(39071941-39072070)
chr8 (164-296)||(8316650-8316782)
chr8 (170-282)||(12273166-12273278)
chr8 (169-281)||(34177284-34177396)
chr8 (165-236)||(7306397-7306468)
chr8 (167-282)||(16388839-16388954)
chr8 (167-282)||(31608826-31608941)
chr8 (167-278)||(34685575-34685685)
chr8 (170-296)||(1425056-1425182)
chr8 (164-278)||(13186057-13186171)
chr8 (166-296)||(13186358-13186488)
chr8 (166-296)||(23663544-23663674)
chr8 (168-294)||(30712018-30712143)
chr8 (168-294)||(30719795-30719920)
chr8 (165-282)||(22915671-22915788)
chr8 (169-278)||(40317966-40318075)
chr8 (166-218)||(7313382-7313434)
chr8 (200-296)||(9337059-9337155)
chr8 (170-233)||(7295289-7295352)
chr8 (167-278)||(8746324-8746435)
chr8 (166-217)||(16388582-16388633)
chr8 (166-233)||(33357497-33357564)
chr8 (167-282)||(38862618-38862733)
chr8 (166-211)||(36186448-36186493)
chr8 (169-233)||(12199268-12199332)
chr8 (169-233)||(12443696-12443760)
chr8 (199-282)||(20050115-20050198)
chr8 (167-233)||(5960046-5960112)
chr8 (163-292)||(10749813-10749940)
chr8 (166-279)||(7983427-7983540)
chr8 (164-233)||(9065662-9065731)
chr8 (168-233)||(11763038-11763103)
chr8 (166-278)||(4994656-4994768)
chr8 (168-296)||(7294103-7294230)
chr8 (167-227)||(42803586-42803646)
[»] chr3 (57 HSPs)
chr3 (160-282)||(2796172-2796294)
chr3 (166-296)||(9367740-9367870)
chr3 (166-282)||(23458292-23458408)
chr3 (167-282)||(9294271-9294386)
chr3 (159-296)||(25107205-25107342)
chr3 (165-233)||(19741254-19741322)
chr3 (176-296)||(23457988-23458108)
chr3 (166-282)||(33689692-33689808)
chr3 (157-296)||(23276282-23276421)
chr3 (165-296)||(33689380-33689510)
chr3 (166-280)||(1079536-1079650)
chr3 (166-296)||(19740922-19741052)
chr3 (168-282)||(51994199-51994313)
chr3 (157-282)||(42342781-42342906)
chr3 (167-238)||(34142575-34142646)
chr3 (167-233)||(3850489-3850555)
chr3 (160-282)||(40033769-40033891)
chr3 (167-233)||(40758147-40758213)
chr3 (164-233)||(46474812-46474881)
chr3 (167-279)||(36418004-36418116)
chr3 (166-281)||(1078536-1078650)
chr3 (166-281)||(21186009-21186124)
chr3 (186-281)||(43608796-43608891)
chr3 (167-278)||(47857562-47857673)
chr3 (166-296)||(40758409-40758539)
chr3 (170-296)||(46475080-46475205)
chr3 (168-296)||(25108394-25108522)
chr3 (166-274)||(47856386-47856494)
chr3 (168-296)||(53757022-53757150)
chr3 (164-279)||(3849028-3849143)
chr3 (164-215)||(26463629-26463680)
chr3 (166-233)||(51993963-51994030)
chr3 (193-279)||(36417714-36417800)
chr3 (164-218)||(53856434-53856488)
chr3 (170-294)||(21783403-21783525)
chr3 (158-238)||(4323559-4323639)
chr3 (173-281)||(6956254-6956362)
chr3 (173-281)||(32431506-32431614)
chr3 (170-218)||(36150530-36150578)
chr3 (199-286)||(26479234-26479321)
chr3 (167-294)||(33154877-33155004)
chr3 (166-217)||(41558007-41558058)
chr3 (171-214)||(41558263-41558306)
chr3 (170-233)||(42343093-42343156)
chr3 (159-278)||(43384275-43384394)
chr3 (167-218)||(53856015-53856066)
chr3 (170-233)||(55052295-55052358)
chr3 (252-282)||(4521795-4521825)
chr3 (173-227)||(9368669-9368723)
chr3 (252-282)||(20704640-20704670)
chr3 (165-219)||(26463962-26464016)
chr3 (252-282)||(44654816-44654846)
chr3 (169-218)||(9292245-9292294)
chr3 (168-233)||(35712045-35712110)
chr3 (165-233)||(2796459-2796527)
chr3 (166-238)||(23272823-23272895)
chr3 (173-233)||(43607786-43607846)
[»] scaffold0007 (2 HSPs)
scaffold0007 (166-282)||(1768-1884)
scaffold0007 (164-233)||(2103-2172)
[»] scaffold0707 (1 HSPs)
scaffold0707 (164-279)||(6395-6510)
[»] scaffold0031 (2 HSPs)
scaffold0031 (167-282)||(68965-69080)
scaffold0031 (167-296)||(69264-69393)
[»] scaffold0775 (1 HSPs)
scaffold0775 (166-279)||(4961-5074)
[»] scaffold0020 (2 HSPs)
scaffold0020 (170-238)||(139675-139743)
scaffold0020 (170-245)||(139991-140066)
[»] scaffold0005 (2 HSPs)
scaffold0005 (165-282)||(37876-37993)
scaffold0005 (167-296)||(37564-37693)
[»] scaffold0075 (1 HSPs)
scaffold0075 (167-238)||(14747-14818)
[»] scaffold0008 (2 HSPs)
scaffold0008 (199-281)||(239865-239947)
scaffold0008 (204-286)||(238292-238374)
[»] scaffold0128 (1 HSPs)
scaffold0128 (170-233)||(19860-19923)
[»] scaffold0100 (1 HSPs)
scaffold0100 (246-295)||(31206-31255)
[»] scaffold0182 (1 HSPs)
scaffold0182 (246-296)||(31703-31753)


Alignment Details
Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 10265438 - 10265545
Alignment:
Q  58 tatataagtcaggatagataatgtttttatttcctttacataatgaatgcttaaacttttttaaaagtcattttaactaaaaagttcaaactatgaatca 157  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||| |||    
T  10265438 tatataagtcaggacagataatgtttttatttcctttatataatgaaggcttaaac-tttttaaaagtcattttaactaaaaaggtcaaactatgagtca 10265536  T
Q  158 taaaataaa 166  Q
    |||||||||    
T  10265537 taaaataaa 10265545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 26463178 - 26463308
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| ||| |||| |||| ||| ||||||  |||| ||||||||     
T  26463178 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatcctggcaaattacccttgcaaagtttaatcat 26463277  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||| || |||||||||    
T  26463278 ttaaaatttcgtccctcatcccagttaatca 26463308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 294
Target Start/End: Complemental strand, 13379911 - 13379783
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||||||| | |||||| |||  |||   |||||||     
T  13379911 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaattcttgcaaactagccttgcaatcattaatcat 13379812  T
Q  266 ttaaaatttcgtccctcaaccaagttaat 294  Q
    |||||||||||||||| | || |||||||    
T  13379811 ttaaaatttcgtccctgagcccagttaat 13379783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 12407508 - 12407635
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | ||||||||| ||||||||||||||||| ||||| |||||||| || ||||| ||| ||  |||| |||||||| |    
T  12407508 ggcttaaatatgtatttcatccttacaattaaggatcgtttaaaaattggtctctgtattcgctaatccttgtaaattactctagcaaagtttaatcatt 12407607  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    |||||||| |||||| |||| |||||||    
T  12407608 taaaatttggtccctgaacctagttaat 12407635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 679863 - 679978
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||    
T  679863 aaaggcttaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatc 679962  T
Q  264 acttaaaatttcgtcc 279  Q
    | ||||||||||||||    
T  679963 atttaaaatttcgtcc 679978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 28498454 - 28498324
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| |||||| || || ||||||||||||||  ||||||||||||| |||| ||||||||||| |||| ||||||||     
T  28498454 aggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcgctaatcctggcaaactaccctcccaaagtttaatcat 28498355  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| |||||| | || |||||||||    
T  28498354 ttaaaatttggtccctgagcccagttaatca 28498324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 30337448 - 30337564
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||    |||||||     
T  30337448 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattggttaatcat 30337547  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  30337548 ttaaaatttcgtccctc 30337564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 3059690 - 3059576
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattta 260  Q
    ||||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||    
T  3059690 aataaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatta 3059591  T
Q  261 atcacttaaaatttc 275  Q
    |||| ||||||||||    
T  3059590 atcatttaaaatttc 3059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 681157 - 681044
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  681157 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 681058  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  681057 ttaaaatttcgtcc 681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 286
Target Start/End: Original strand, 8089433 - 8089562
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||| |||||||||||||||||||   ||||| |||||| |||||||||||||||||||| || |||||| |||| || | ||| ||||||  ||       
T  8089433 ataaaagaaaggcttaaatatgtattacctccctgcaattaggggtcgtttaaaaattggtccctataatcgttaatccttgcaaattacccttgcattg 8089532  T
Q  257 tttaatcacttaaaatttcgtccctcaacc 286  Q
    |||||||| |||||||||||||||| ||||    
T  8089533 tttaatcatttaaaatttcgtcccttaacc 8089562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 30337846 - 30337717
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||||||||||| |||||||||||||| || | |||||| |||  |||   ||||||| |    
T  30337846 ggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcatt 30337747  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  30337746 taaaatttcgtcctttgaccaatttaatca 30337717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 15116660 - 15116532
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||| |||||||||||  ||| | |||||| ||||||||||||||||||||   |||||||||||| || | |||||| |||  |||| |||||||| |    
T  15116660 ggctttaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtcctcgtaatcgctaatccttgcaaactagccttgcaaagtttaatcatt 15116561  T
Q  267 taaaatttcgtccctcaaccaagttaatc 295  Q
    ||||| || ||||||||||| ||||||||    
T  15116560 taaaaattggtccctcaacccagttaatc 15116532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 33517965 - 33517833
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | ||| || |||  |||   ||||||    
T  33517965 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatc 33517866  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  33517865 atttaaaatttcgtcctttgaccaacttaatca 33517833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 29810865 - 29810735
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| |||||| || || ||||||||||||||  ||||||| |||||  ||| ||||||||||| |||| ||||||||     
T  29810865 aggctttaatatgtgtttcgtccctgcaattagggctcatttaaaaattggtccttgtaatcactaatcatggcaaactaccctcccaaagtttaatcat 29810766  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| |||||| | || |||||||||    
T  29810765 ttaaaatttggtccctgagcccagttaatca 29810735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 30726188 - 30726058
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||   ||   |||||||     
T  30726188 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgaaatcattaatcat 30726089  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  30726088 ttaaaatttcgtcctttgaccaacttaatca 30726058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 20652077 - 20651948
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| || ||| |||||| ||||||||||||||||| || ||||| || ||||| || | |||| | |||  |||   |||||||    
T  20652077 aaggcttaaatatgtatttaattcctgcaattatgggtcgtttaaaaattgatccctgtattcactaatccttgcaaaccagccttgcaatcgttaatca 20651978  T
Q  265 cttaaaatttcgtccctcaaccaagttaat 294  Q
     |||||||||||||||| |||| |||||||    
T  20651977 tttaaaatttcgtccctgaacccagttaat 20651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 21628143 - 21628026
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||||| ||||||||||||| |||||||||||||| |||  ||  ||||||  ||   ||||||||    
T  21628143 aaggcttaaatatgtatttcatccttgcaattaggggtcgcttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatca 21628044  T
Q  265 cttaaaatttcgtccctc 282  Q
     ||||||||| |||||||    
T  21628043 tttaaaattttgtccctc 21628026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 26464627 - 26464498
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||||| |||||| ||||| |||||||| ||||| ||||| | | |||| |||| ||  | |||||  |||| |||||||||    
T  26464627 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaaatggtccctgtatttgttaatcctggcaattttccctcctaaaaattaatcact 26464528  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||| ||  |||||||||| |||||||||    
T  26464527 taaaaattgatccctcaacctagttaatca 26464498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 33647380 - 33647267
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  33647380 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactaaccttgcaatcattaatcat 33647281  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||| ||||    
T  33647280 ttaaaatttagtcc 33647267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 294
Target Start/End: Complemental strand, 8090356 - 8090228
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||  |||| | |||||| ||||||||||||||||||||  |||| || ||||| || | ||| ||||||  |||| ||||||||     
T  8090356 aggcttaaatatgtattacatccttgcaattaggggtcgtttaaaaattggtccttgtattcactaatccttgcaaattacccttgcaaagtttaatcat 8090257  T
Q  266 ttaaaatttcgtccctcaaccaagttaat 294  Q
    ||||||||| |||||| | || |||||||    
T  8090256 ttaaaatttggtccctgagcccagttaat 8090228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 17734193 - 17734325
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||   |||||| |||||| || | |||||| |||  |||   ||||||    
T  17734193 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggttcttgtaattgctaatccttgcaaactagccttgcaatcattaatc 17734292  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  17734293 atttaaaatttcgtcctttgaccaatttaatca 17734325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 33517537 - 33517649
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| |  ||||| || ||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| ||||    
T  33517537 ttaaatatgtatttcatccttgtaattagggatcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 33517636  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  33517637 aatttcgtccctc 33517649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 11434804 - 11434931
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||||||||||||||||||||||||  |||| ||||||||  | | |||||| |||  |||   ||||||| |||    
T  11434804 cttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatcgttgcaaactagccttgcaatcattaatcattta 11434903  T
Q  269 aaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||| |  ||| |||||||||    
T  11434904 aaatttcgtcctttgacccagttaatca 11434931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 30725760 - 30725874
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| || | | |||||| |||||||||||||||||||| |||||||||||||| |||  ||  ||||||  ||   |||||||| |    
T  30725760 ggcttaaatatgtatttcattcttgcaatta-gggtcgtttaaaaattggtctctgtaatcgctaatcctgccaatttacccttgcactgtttaatcatt 30725858  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  30725859 taaaatttcgtccctc 30725874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 30804286 - 30804160
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||| || ||||| ||||||||||| | |||||| | |  |||   ||||||| ||||    
T  30804286 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaattcttgcaaactagcgttgcaatcattaatcatttaa 30804187  T
Q  270 aatttcgtccctcaaccaagttaatca 296  Q
    |||||||||| |  ||||| |||||||    
T  30804186 aatttcgtcctttgaccaacttaatca 30804160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 20651009 - 20651122
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| || ||||||||||||||||  ||||| |||||||| || | |||| | |||  |||   |||||||     
T  20651009 aggcttaaatatgtatttgatccctgcaattagggatcgtttaaaaattggttcctgtattcgctaatccttgcaaaccagccttgcaatcattaatcat 20651108  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  20651109 ttaaaatttcgtcc 20651122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 21627711 - 21627842
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| |  |||||||| |||||||||||||| ||  |||| |||||||| || | |||||| |||  |||   |||||||    
T  21627711 aaggcttaaatatgtatttcatccttgtaattaaggatcgtttaaaaattgatccatgtattcgctaatccttgcaaactagccttgcaatcattaatca 21627810  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||||||||||||| |  ||||| |||||||    
T  21627811 tttaaaatttcgtcctttgaccaacttaatca 21627842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 282
Target Start/End: Original strand, 12080625 - 12080751
Alignment:
Q  156 cataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaa 255  Q
    ||||||| | || ||||||| ||||||| |||| | |||||| ||||||||||||||||| || ||||||||||||||  ||| ||  |||||   ||      
T  12080625 cataaaaaatagtcttaaatttgtatttcatccttgcaattaggggtcgtttaaaaattgctccctgtaatcgctaatcatggcaatttacccctgcatt 12080724  T
Q  256 atttaatcacttaaaatttcgtccctc 282  Q
     |||||||| |||||||||||||||||    
T  12080725 gtttaatcatttaaaatttcgtccctc 12080751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 12081065 - 12080952
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| | |||||||||||||| ||| ||||| |||||||| || | ||||||  ||  |||   |||||||     
T  12081065 aggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaatttgtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 12080966  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  12080965 ttaaaatttcgtcc 12080952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 17734590 - 17734525
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||| | |||||| ||||||||||||||||| ||  |||||||||||||    
T  17734590 gcttaaatatgtatttgatccttacaattatgggtcgtttaaaaattgatccatgtaatcgctaat 17734525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 3059260 - 3059372
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | ||||||||||||||||||||  | |||  ||||||||||||| || | ||  ||||||  ||   |||||||| ||||    
T  3059260 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaatattgtccatgtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaa 3059359  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  3059360 aatttcgtccctc 3059372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 12408600 - 12408492
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||| |||||||| ||||||  |||| |||||||| || | ||| || |||  |||| ||||||||     
T  12408600 aggcttaaatatgtatttcatccttacaattaggggttgtttaaaagttggtccttgtattcgctaatccttgcaaattatccttgcaaagtttaatcat 12408501  T
Q  266 ttaaaattt 274  Q
    |||||||||    
T  12408500 ttaaaattt 12408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 15115339 - 15115451
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | ||||||  | ||||||||||||||||| || |||||| |||| || | ||| || |||  |||| |||||||| |    
T  15115339 ggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtccctataatcgttaatccttgcaaattagccttgcaaagtttaatcatt 15115438  T
Q  267 taaaatttcgtcc 279  Q
    |||||||| ||||    
T  15115439 taaaatttagtcc 15115451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 13378531 - 13378654
Alignment:
Q  173 aatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaat 272  Q
    |||||||||||  ||||| ||| || ||||| |||||||| |||||  |||| | | |||| |||| ||  | |||||  |||||||||||||||||||     
T  13378531 aatatgtatttactccctgcaaataggggtcatttaaaaaatggtccttgtatttgttaatcctggcaatttgccctcctaaaatttaatcacttaaaaa 13378630  T
Q  273 ttcgtccctcaaccaagttaatca 296  Q
    || ||||||||||| |||||||||    
T  13378631 ttggtccctcaacccagttaatca 13378654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 22617873 - 22617996
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaatt-ggtcactgtaatcgctaattctggtaaactaccctctcaaa 255  Q
    |||||| ||||| |||||||||||||| |||| | |||||| | |||||||||||||| |||| ||| | |||||||| || | | ||||||||  ||||    
T  22617873 ataaaagaaaggtttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattgggtctctgcattcgctaatccttgcagactacccttgcaaa 22617972  T
Q  256 atttaatcacttaaaatttcgtcc 279  Q
      ||||||| ||||||| ||||||    
T  22617973 tattaatcatttaaaatgtcgtcc 22617996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 30803855 - 30803976
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattta 260  Q
    |||| ||| |||||||||||||| |||| | ||| || | ||||||||||||||| ||  |||||||| |||| |||| ||  ||||||  ||   ||||    
T  30803855 aatatagggttaaatatgtatttcatccttgcaactaggtgtcgtttaaaaattgatctatgtaatcgttaatcctggcaatttacccttacattgttta 30803954  T
Q  261 atcacttaaaatttcgtccctc 282  Q
    |||| |||||||||||||||||    
T  30803955 atcatttaaaatttcgtccctc 30803976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 33646970 - 33647074
Alignment:
Q  174 atatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatt 273  Q
    |||| ||||| |||| | ||||||||||||||||||||| || || ||||||||||||||  ||  ||  ||||||  ||  ||||||||| ||||||||    
T  33646970 atatctatttcatccttacaattaagggtcgtttaaaaagtgatccctgtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatt 33647069  T
Q  274 tcgtc 278  Q
    |||||    
T  33647070 tcgtc 33647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 246 - 281
Target Start/End: Complemental strand, 1215215 - 1215180
Alignment:
Q  246 ccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||| |||||||||||||||||||||||||||||||    
T  1215215 ccctgtcaaaatttaatcacttaaaatttcgtccct 1215180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 3176429 - 3176386
Alignment:
Q  194 attaagggtcgtttaaaaattggtcactgtaatcgctaattctg 237  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||    
T  3176429 attaggggtcatttaaaaattggtcactgtaatcgttaattctg 3176386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 24210557 - 24210646
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctc 282  Q
    ||||| ||||| |||||||||||||| ||||||| | ||||  | | ||| ||||||  |||| |||||||| |||||||||| ||||||    
T  24210557 aattaggggtcatttaaaaattggtctctgtaattgttaatcatagcaaattacccttgcaaagtttaatcatttaaaatttcatccctc 24210646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 11393234 - 11393166
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||| ||||||||| |||  |  ||||| |||||||||||||||||||| | ||| ||||||||    
T  11393234 aaggcttaagtatgtatttcatctttgtaattaggggtcgtttaaaaattggtccccgtattcgctaat 11393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 20425477 - 20425607
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||| || |||||| |||||| || || |||||||||||||   |||||||| ||||  ||| ||||||||||||||||||||||||||    
T  20425477 aggcttaaatatgtaattcatccctgcaattagggatcatttaaaaattggttcatgtaatcgataatcttggcaaactaccctctcaaaatttaatcac 20425576  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||||||||||||||||    
T  20425577 ttaaaatttcgtccctcaaccaagttaatca 20425607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 5457336 - 5457206
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||| |||| || | ||| |||||| ||||  ||||||||     
T  5457336 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtattcgttaatccttgcaaattaccctttcaatgtttaatcat 5457237  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||| || |||||||||    
T  5457236 ttaaaatttcgtccctcatcccagttaatca 5457206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 17102010 - 17102135
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||| |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  |||||   ||       
T  17102010 ataaaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattg 17102109  T
Q  257 tttaatcacttaaaatttcgtccctc 282  Q
    |||||||| |||||||||||||||||    
T  17102110 tttaatcatttaaaatttcgtccctc 17102135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 20426759 - 20426642
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| ||||||  ||||||||||||||||||| ||||| |||||||| |||| |   ||||||| |||| ||||||||     
T  20426759 aggcttaaatatgtatttcatccctgcaattagaggtcgtttaaaaattggtccctgtattcgctaatcctggcattttaccctcacaaagtttaatcat 20426660  T
Q  266 ttaaaatttcgtccctca 283  Q
    ||||||||| ||||||||    
T  20426659 ttaaaatttagtccctca 20426642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 43123175 - 43123289
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||  ||||| |||||| |||||||||||||||||||| ||||| || ||||| || | |||||||||||||||| | |||||| |    
T  43123175 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactaccctctcaaagtataatcatt 43123274  T
Q  267 taaaatttcgtccct 281  Q
    ||||| || ||||||    
T  43123275 taaaaattagtccct 43123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 13384500 - 13384616
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| |||| || ||| |||||| ||||||||||||| |||||| |||||| |||||||||||||| || | ||||||||||  ||||  |||||||    
T  13384500 aaggctttaataagtgtttcatccctgcaattaagggtcgcttaaaatttggtccctgtaatcgctaatcctagcaaactacccttgcaaacgttaatca 13384599  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  13384600 tttaaaatttcgtccct 13384616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 28469437 - 28469321
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| |||| ||  ||||||  ||   ||||||||     
T  28469437 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccttgcattgtttaatcat 28469338  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  28469337 ttaaaatttcgtccctc 28469321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 10935794 - 10935909
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||| ||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |    
T  10935794 ggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 10935893  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  10935894 taaaatttcgtccctc 10935909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 6253472 - 6253586
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  |||||   ||   |||||||| ||    
T  6253472 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcattt 6253571  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  6253572 aaaatttcgtccctc 6253586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 19204487 - 19204604
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||||||| ||||||||| ||  ||||||  ||   ||||||||    
T  19204487 aaggcttaaatatgtatttgatccttgaaattaggggtcgtttaaaaattggtccctgtaatcgttaattctggcaatttacccttgcattgtttaatca 19204586  T
Q  265 cttaaaatttcgtccctc 282  Q
     ||||||||| |||||||    
T  19204587 tttaaaattttgtccctc 19204604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 27397024 - 27396957
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  27397024 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 27396957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 282
Target Start/End: Original strand, 27991731 - 27991854
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| |||||||||||||||||||| |||| | |||||| |||||||||| |||||| || |||||||||||||| |||| ||  |||||   ||   ||    
T  27991731 aaaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttagaaattgatccctgtaatcgctaatcctggcaatttacccctgcattgtt 27991830  T
Q  259 taatcacttaaaatttcgtccctc 282  Q
    |||||| |||||||||||||||||    
T  27991831 taatcatttaaaatttcgtccctc 27991854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 18670291 - 18670177
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||| ||||| ||||| ||| |||| || | ||  | ||||| |||| ||||||||||    
T  18670291 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaaatggtccctgtattcgttaatccttgcaatttgccctcccaaagtttaatcact 18670192  T
Q  267 taaaatttcgtccct 281  Q
    |||||||| ||||||    
T  18670191 taaaatttggtccct 18670177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32298765 - 32298843
Alignment:
Q  155 tcataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||| |||||||||||||||||||| |||| | |||||| |||||||||||||| ||||| ||||| ||||||||    
T  32298765 tcataaaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaactggtccctgtattcgctaat 32298843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 32299132 - 32299018
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| | |||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |     
T  32299132 gcttaaatatgtatttgatccttgcaattaggagtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattg 32299033  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  32299032 aaaatttcgtccctc 32299018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 6571011 - 6571128
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| |||  ||  ||||||  ||   ||||||||    
T  6571011 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctgacaatttacccttgcattgtttaatca 6571110  T
Q  265 cttaaaatttcgtccctc 282  Q
     ||||||||| |||||||    
T  6571111 tttaaaattttgtccctc 6571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 24388821 - 24388934
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||  ||| ||  ||||||   |   ||||||||||||    
T  24388821 cttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtattcgctaatcatggcaatttacccttgtattgtttaatcactta 24388920  T
Q  269 aaatttcgtccctc 282  Q
    ||||||||||||||    
T  24388921 aaatttcgtccctc 24388934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 10936230 - 10936110
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| |||||||||||||||||||| |||| | |||||| |||| |||||||||||||||  |||| |||||||| || | |||||| |||  |||   |    
T  10936230 aaaaaaaaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcat 10936131  T
Q  259 taatcacttaaaatttcgtcc 279  Q
    |||||| ||||||||||||||    
T  10936130 taatcatttaaaatttcgtcc 10936110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 286
Target Start/End: Complemental strand, 18856063 - 18855963
Alignment:
Q  186 tcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaac 285  Q
    ||||| |||||| ||||| |||||||||||||| ||||||||| ||||  ||| ||| ||||||  |||| |||||||| |||||||||||||||| |||    
T  18856063 tccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtcccttaac 18855964  T
Q  286 c 286  Q
    |    
T  18855963 c 18855963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 22871709 - 22871590
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||||||||||||||||||| |||| | |||||| ||||| |||||||||||||| ||||||| |||||| || | ||  ||||||  ||   ||||||    
T  22871709 taaaggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatagctaatccttgcaatttacccttgcattgtttaat 22871610  T
Q  263 cacttaaaatttcgtccctc 282  Q
    || |||||||||| ||||||    
T  22871609 catttaaaatttcttccctc 22871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 274
Target Start/End: Complemental strand, 30128767 - 30128668
Alignment:
Q  175 tatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaattt 274  Q
    ||||||||| |||| | ||||||||||||||||||||| ||||| || || ||| ||||||| | ||  ||||||| |||| ||||||||||||||||||    
T  30128767 tatgtatttaatccttgcaattaagggtcgtttaaaaaatggtccctatattcgttaattcttgcaatttaccctcccaaagtttaatcacttaaaattt 30128668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 42731419 - 42731534
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||| | |||| | |||||| ||||||||||||||||||||  ||||||||||||| |||| ||  |||||   ||   |||||||| |    
T  42731419 ggcttaaatatgtatctcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccctgcattgtttaatcatt 42731518  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  42731519 taaaatttcgtccctc 42731534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 6253872 - 6253802
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||    
T  6253872 taaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaat 6253802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 17102418 - 17102288
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| |||  |||   |||||||     
T  17102418 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaactagccttgcaatcattaatcat 17102319  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| |||| |  ||||| |||||||    
T  17102318 ttaaaatttagtcctttgaccaacttaatca 17102288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 27992133 - 27992007
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| ||||    
T  27992133 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 27992034  T
Q  270 aatttcgtccctcaaccaagttaatca 296  Q
    ||||| |||| |  ||||| |||||||    
T  27992033 aatttagtcctttgaccaacttaatca 27992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 34793901 - 34793955
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  34793901 aaaggcttaaatatgtattttatccctgcaaataggggtcgtttaaaaattggtc 34793955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 24389216 - 24389147
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||    
T  24389216 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaat 24389147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 42019598 - 42019663
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||||||  |||| ||||||||    
T  42019598 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaat 42019663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 275
Target Start/End: Original strand, 48788802 - 48788911
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| || | | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  48788802 aggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 48788901  T
Q  266 ttaaaatttc 275  Q
    ||||||||||    
T  48788902 ttaaaatttc 48788911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 2640176 - 2640244
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||  ||||| ||||||||    
T  2640176 aaggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtacctgtattcgctaat 2640244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 2640607 - 2640495
Alignment:
Q  167 ggcttaaat-atgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||| |||||||| |||| |  ||||| |||||||||||||||||| | ||||||||||||||||||| ||  ||||||  ||   ||||||||     
T  2640607 ggcttaaattatgtatttcatccttataattaggggtcgtttaaaaattggcctctgtaatcgctaattctggcaatttacccttgcattgtttaatcat 2640508  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  2640507 ttaaaatttcgtc 2640495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 27396619 - 27396695
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||||||||||| |||| |  ||||| ||| ||||||||||||||||  |||| ||||||||    
T  27396619 ataaaataaaggcttaaatatgtatttcatccttgtaattaggggccgtttaaaaattggtccatgtattcgctaat 27396695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 42362450 - 42362578
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| | ||||||||||||||||||  |||| ||| |||| || | ||| ||||||  ||   |||||||| |    
T  42362450 ggcttaaatatgtatttcatccttgcaattaggtgtcgtttaaaaattggtccttgtattcgttaatccttgcaaattacccttgcattctttaatcatt 42362549  T
Q  267 taaaatttcgtccctcaaccaagttaatc 295  Q
    ||||||||||||| | |||| ||||||||    
T  42362550 taaaatttcgtcctttaacccagttaatc 42362578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 274
Target Start/End: Complemental strand, 13386175 - 13386068
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| || | | |||||| |||||||||||||||||||| || || |||||||| || | |||||| |||  |||  |||||||| |    
T  13386175 ggcttaaatatgtatttaatacttgcaattaggggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatgtttaatcatt 13386076  T
Q  267 taaaattt 274  Q
    ||||||||    
T  13386075 taaaattt 13386068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 17886919 - 17886804
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| || || ||||||||||| ||  |||| ||| |||| || | ||||||||||  ||||  |||||||     
T  17886919 aggcttaaatatgtatttcatccttgcaattagggatcatttaaaaattgatccatgtattcgttaatccttgcaaactacccttgcaaatattaatcat 17886820  T
Q  266 ttaaaatttcgtccct 281  Q
    ||||||||||||||||    
T  17886819 ttaaaatttcgtccct 17886804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 28105500 - 28105567
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||| ||| ||||| || |||||    
T  28105500 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaatttgtccctgtattcactaat 28105567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 28469008 - 28469139
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  | || ||||||||  | | |||||| |||  |||   |||||||    
T  28469008 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttatattcgctaatctttgcaaactagccttgcaatcattaatca 28469107  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||||||||||||| |  ||||| |||||||    
T  28469108 tttaaaatttcgtcctttgaccaacttaatca 28469139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 23181421 - 23181307
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||  | |||||| |||||||||||| |||||||  |||||||||||||  ||| ||  ||||||  ||   |||||||| ||    
T  23181421 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaatattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatcattt 23181322  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  23181321 aaaatttcgtccctc 23181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 37656848 - 37656918
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||| |||||||||||||| |||| | |||||| |  ||||||||||||||||| ||||||||||||||    
T  37656848 taaaggtttaaatatgtatttcatccttgcaattaggaatcgtttaaaaattggtctctgtaatcgctaat 37656918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 29144411 - 29144358
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtca 219  Q
    ||||||||||||||||||  ||||| |||||| |||||||||||||||||||||    
T  29144411 aggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggtca 29144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 18855409 - 18855529
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| ||| || ||||| |||||||| ||||| || |||||| |||| ||   || ||||||| |||||| |||||||     
T  18855409 aggctttaatatgtttttcgtccctgcaaataggggtcatttaaaaaatggtccctataatcgttaatcctaaaaatctaccctttcaaaagttaatcaa 18855508  T
Q  266 ttaaaatttcgtccctcaacc 286  Q
    |||||||||||||||| ||||    
T  18855509 ttaaaatttcgtcccttaacc 18855529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 40380112 - 40380000
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| | ||||||||||||||||||  |||| |||| ||| || | |||||| |||  |||   ||||||| |    
T  40380112 ggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtccatgtattcgccaatccttgcaaactagccttgcaatcattaatcatt 40380013  T
Q  267 taaaatttcgtcc 279  Q
    |||||||||||||    
T  40380012 taaaatttcgtcc 40380000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 45011033 - 45010921
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||   |||| |||||||| || | ||  ||||||  ||   ||||||||     
T  45011033 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaatttacccttgcattgtttaatcat 45010934  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  45010933 ttaaaatttcgtc 45010921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 18087766 - 18087647
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||| ||||||| |||  ||| | |||||| ||||| ||||||||||||||||||||||||||||| || | ||| || |||  |||   ||||||| |    
T  18087766 ggctttaatatgtgtttagtccttgcaattaggggtcatttaaaaattggtcactgtaatcgctaatccttgcaaaatagccttgcaattattaatcatt 18087667  T
Q  267 taaaatttcgtccctcaacc 286  Q
    |||||||| |||||| ||||    
T  18087666 taaaattttgtcccttaacc 18087647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 40379764 - 40379835
Alignment:
Q  162 ataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||| | |||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||    
T  40379764 ataaaggttaaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtattcgctaat 40379835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 34799585 - 34799535
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||    
T  34799585 gcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtc 34799535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 43124548 - 43124466
Alignment:
Q  199 gggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    ||||| |||||||||||||| |||||||||||||| ||   ||||||||||  ||   |||||||| ||||||||||||||||    
T  43124548 gggtcatttaaaaattggtccctgtaatcgctaatccttacaaactacccttgcattgtttaatcatttaaaatttcgtccct 43124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 277
Target Start/End: Original strand, 32687394 - 32687507
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||| ||||||| |||| ||| |  ||||| ||||| ||||||| |||||| ||||||||| |||| |||| ||| | ||||  ||||  ||||||    
T  32687394 aaaggctttaatatgtgttttgtccttgtaattaggggtcatttaaaatttggtccctgtaatcgttaatcctggcaaattgcccttgcaaatattaatc 32687493  T
Q  264 acttaaaatttcgt 277  Q
    | ||||||||||||    
T  32687494 atttaaaatttcgt 32687507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 17885653 - 17885757
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtt 291  Q
    |||||| |||||||||||||||||||| ||||| || ||||| || | |||||| |||  |||   ||||||| |||||||||||||| |  ||| ||||    
T  17885653 caattaggggtcgtttaaaaattggtccctgtattctctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgacccagtt 17885752  T
Q  292 aatca 296  Q
    |||||    
T  17885753 aatca 17885757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 30127438 - 30127489
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    |||||||||||||||||||  |||||| |||||| || ||||||||||||||    
T  30127438 aaaggcttaaatatgtattcaatccctgcaattagggatcgtttaaaaattg 30127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 42020022 - 42019959
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| | |||||| |||| ||||||||||||||  || |||||||||||    
T  42020022 ttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggttcctataatcgctaat 42019959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 29141606 - 29141556
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    ||||||||||||||||||| |||| | ||||||  ||||||||||||||||    
T  29141606 aaggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattg 29141556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 33808323 - 33808389
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| || | |  ||||| | |||||||||||||||||| ||||| ||||||||    
T  33808323 ggcttaaatatgtatttcattcttgaaattacgcgtcgtttaaaaattggtctctgtattcgctaat 33808389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 37657265 - 37657199
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| | |||||| || |||||||||||||| || ||||| ||| ||||    
T  37657265 ggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattgatccctgtattcgttaat 37657199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 1960313 - 1960252
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||| || |||||||||||||||| |||||| ||| || |||||| |||||| ||||||    
T  1960313 ataaaattaatgcttaaatatgtatttgatccctgcaaataggggtcgcttaaaatttggtc 1960252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 16804048 - 16804011
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgc 229  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  16804048 caattaggggtcgtttaaaaattggtccctgtaatcgc 16804011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 32053141 - 32053194
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||||| |||| |  ||||| ||||||||||||||| ||||    
T  32053141 aaggcttaaatatgtatttcatccttgtaattatgggtcgtttaaaaatcggtc 32053194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 281
Target Start/End: Complemental strand, 32688621 - 32688532
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||||| ||||| ||||||| ||||||  ||||||||||||| |||  ||| | ||||  ||||  ||||||| ||||||||||||||||    
T  32688621 caattaggggtcatttaaaatttggtccttgtaatcgctaatcctgacaaattgcccttgcaaatattaatcatttaaaatttcgtccct 32688532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 42731848 - 42731799
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    |||||||||||||||||| |||| |  ||||| |||||||||||||||||    
T  42731848 aggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattg 42731799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 19204884 - 19204820
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||| |||| |||| | |||||| |||| ||||||||||||||   |||||||||||||    
T  19204884 cttaaatatgaatttgatccttacaattaggggtggtttaaaaattggttcatgtaatcgctaat 19204820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 5993888 - 5994004
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||||||||||||| ||  ||||||  ||   ||||||||     
T  5993888 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcat 5993987  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  5993988 ttaaaatttcgtccctc 5994004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 13962863 - 13962979
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||| |||||||||| | |||||| |||||||||||||||||||| ||||||| |||||| |||||||  ||||||  ||   ||||||||     
T  13962863 aggcttaaatatatattttatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatcctggtaatttacccttgcattgtttaatcat 13962962  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  13962963 ttaaaatttcgtccctc 13962979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 35512151 - 35512263
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| ||||    
T  35512151 ttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaa 35512250  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  35512251 aatttcgtccctc 35512263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 169 - 282
Target Start/End: Original strand, 39453302 - 39453415
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||    
T  39453302 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 39453401  T
Q  269 aaatttcgtccctc 282  Q
    ||||||||||||||    
T  39453402 aaatttcgtccctc 39453415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 11761746 - 11761861
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  |||||   ||   |||||||    
T  11761746 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatc 11761845  T
Q  264 acttaaaatttcgtcc 279  Q
    | ||||||||||||||    
T  11761846 atttaaaatttcgtcc 11761861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 20814564 - 20814497
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||    
T  20814564 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcactgtaatcgctaat 20814497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 27587148 - 27587263
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  |||||   ||   |||||||| |    
T  27587148 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcatcgtttaatcatt 27587247  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  27587248 taaaatttcgtccctc 27587263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 296
Target Start/End: Complemental strand, 11762150 - 11762016
Alignment:
Q  162 ataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaa 261  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||    
T  11762150 ataaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaa 11762051  T
Q  262 tcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||| ||||||||| |||| |  ||||| |||||||    
T  11762050 tcatttaaaatttagtcctttgaccaacttaatca 11762016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 24547556 - 24547438
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  | ||||||||||| |||| ||  ||||||  ||   |||||||    
T  24547556 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttataatcgctaatcctggcaatttacccttgcattgtttaatc 24547457  T
Q  264 acttaaaatttcgtccctc 282  Q
    | |||||||||||||||||    
T  24547456 atttaaaatttcgtccctc 24547438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 42265732 - 42265801
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  42265732 aaaggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaat 42265801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 17202397 - 17202465
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||| ||||| |||| | |||||| |||||||||||||||||||||||||||||||||||    
T  17202397 aaggcttaaatatatatttcatccttccaattaggggtcgtttaaaaattggtcactgtaatcgctaat 17202465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 3529270 - 3529155
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| |||| ||  |||||   ||   |||||||| |    
T  3529270 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattgtttaatcatt 3529171  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  3529170 taaaatttcgtccctc 3529155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 20840866 - 20840799
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  20840866 aggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtaactgtaatcgctaat 20840799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 21265571 - 21265504
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||||  ||||||||||||||    
T  21265571 aggcttaaatatgtatttcatccttacaattaagggtcgtttaaaaattggttcctgtaatcgctaat 21265504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 14194422 - 14194552
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | ||||||  ||  |||   |||||||     
T  14194422 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 14194521  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  14194522 ttaaaatttcgtcctttgaccaacttaatca 14194552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 5024449 - 5024380
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||| |||||||||||||| |||| | |||||| ||||||||||||||||||||| |||||||||||||    
T  5024449 aaaggattaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtaatcgctaat 5024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 30096970 - 30096841
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||| |||||| ||||||  ||||| ||||| |||||||| ||||| |||||  |  ||||||||| ||  |||||||  |||| |||||||||    
T  30096970 ggcttaaatacgtatttcatccctgtaattaggggtcatttaaaaaatggtccctgtatccattaattctggcaatttaccctcctaaaaattaatcact 30096871  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||| || ||||||||||| |||||||||    
T  30096870 taaaaattggtccctcaacctagttaatca 30096841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 3528870 - 3529002
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| | |||||| || | |||||| |||  |||   ||||||    
T  3528870 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtatttgctaatccttgcaaactagccttgcaatcgttaatc 3528969  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | ||||||||| |||| |  ||||| |||||||    
T  3528970 atttaaaatttagtcctttgaccaacttaatca 3529002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 6150444 - 6150504
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggt 217  Q
    ||||||||||||||||||||||||||| |||| | |||||| |||||||||||||||||||    
T  6150444 ataaaataaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 6150504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 18670200 - 18670268
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | ||| || |||||||||||||||||||| ||||||||||||||    
T  18670200 aaggcttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtccctgtaatcgctaat 18670268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 19892746 - 19892670
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||| ||||||||||||||| |||| | ||||||  ||||||||||||||||||| ||||||||| ||||    
T  19892746 ataaaataaagtcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtctctgtaatcgttaat 19892670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 18247087 - 18247199
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||||||||||  ||| ||  ||||||  ||  ||||||||| ||    
T  18247087 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat--tggcaatttacccttgcattatttaatcattt 18247184  T
Q  268 aaaatttcgtccctc 282  Q
    | |||||||||||||    
T  18247185 agaatttcgtccctc 18247199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 21257586 - 21257523
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||||| |||||| |||||||||||||||||| ||||||| ||||||||    
T  21257586 ttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggacactgtattcgctaat 21257523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 281
Target Start/End: Original strand, 24141443 - 24141566
Alignment:
Q  158 taaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaat 257  Q
    |||||||||||||| ||||||| |||  ||||| ||||||   ||| |||||||||||||| ||||||||| |||| |||| ||| || |||  |||| |    
T  24141443 taaaataaaggctttaatatgtgtttcgtccctgcaattagacgtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagt 24141542  T
Q  258 ttaatcacttaaaatttcgtccct 281  Q
    ||||||| |||||||||| |||||    
T  24141543 ttaatcatttaaaatttcatccct 24141566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 28770868 - 28770935
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  28770868 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaat 28770935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 39453729 - 39453598
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||| |||||||||||||| ||||| ||||||||  | | |||||| |||  |||   |||||||    
T  39453729 aaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtattcgctaatctttgcaaactagccttgcaatcattaatca 39453630  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||||||||||||| |  ||||| |||||||    
T  39453629 tttaaaatttcgtcctttgaccaacttaatca 39453598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 28269421 - 28269551
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||  | |||||| |||||||||||||||||||| | ||| |||||||| || | |||||| |||  |||   |||||||     
T  28269421 aggcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtcccagtattcgctaatccttgcaaactagccttgcaatcattaatcat 28269520  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  28269521 ttaaaatttcgtcctttgaccaacttaatca 28269551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 16157285 - 16157168
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| || |||||| |||| |||  ||  ||||||  ||   ||||||||    
T  16157285 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgttaatcctgacaatttacccttgcattgtttaatca 16157186  T
Q  265 cttaaaatttcgtccctc 282  Q
     ||||||||| |||||||    
T  16157185 tttaaaattttgtccctc 16157168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 27587543 - 27587414
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||||| |    
T  27587543 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 27587444  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||| |||| |  ||||| |||||||    
T  27587443 taaaatttagtcctttgaccaacttaatca 27587414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 169 - 278
Target Start/End: Complemental strand, 35512540 - 35512431
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||| ||| || | |||||| |||  |||   ||||||| |||    
T  35512540 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgccaatccttgcaaactagccttgcaatcattaatcattta 35512441  T
Q  269 aaatttcgtc 278  Q
    ||||||||||    
T  35512440 aaatttcgtc 35512431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 42067953 - 42067840
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| ||| |||||| |||||| ||||| ||||||| |||||| ||||||| | |||| |||| ||||| |||   |||| ||||||||     
T  42067953 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgataatcctggcaaactgcccctgcaaactttaatcat 42067854  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  42067853 ttaaaatttcgtcc 42067840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 18247506 - 18247438
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||| |||||| ||||| ||||||||    
T  18247506 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaatttggtctctgtattcgctaat 18247438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 38475428 - 38475312
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||| |||| |||| | |||||| ||||||||||||||||||||  |||||||| |||| |||  ||  ||||||  ||   ||||||||     
T  38475428 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatcctgacaatttacccttgcattgtttaatcat 38475329  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  38475328 ttaaaatttcgtccctc 38475312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 40150245 - 40150113
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||| ||||||| |||  ||| | |||||| ||||| ||| |||||||||| ||||||||| |||| || | ||| |||||| ||||| |||||||    
T  40150245 aaaggctttaatatgtgtttcgtccttgcaattaggggtcattttaaaattggtccctgtaatcgttaatcctagaaaattaccctttcaaagtttaatc 40150146  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||| | || ||||||||||| | |||||||    
T  40150145 atttaagaattggtccctcaacctaattaatca 40150113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 43159245 - 43159113
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||| |||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| ||   |||||| |||  |||   ||||||    
T  43159245 aaaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcgttgtattcgctaatccttacaaactagccttgcaatcattaatc 43159146  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  43159145 atttaaaatttcgtcctttgaccaacttaatca 43159113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 16082979 - 16083106
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| |||| ||||||||||| ||| ||||||||| |||| |||| ||  ||||||  ||   |||||||| |||    
T  16082979 cttaaatatgtatttcatccttccaattaggggttgtttaaaaattagtccctgtaatcgataatcctggcaatttacccttgcattgtttaatcattta 16083078  T
Q  269 aaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| ||||  |||| |||||||    
T  16083079 aaatttcgtacctctcccaacttaatca 16083106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 17202827 - 17202716
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||| |||| ||||| |||||||| || | ||||||  ||  |||   ||||||| |    
T  17202827 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 17202728  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  17202727 taaaatttcgtc 17202716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 20840532 - 20840599
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||  ||||||||| ||||    
T  20840532 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtacctgtaatcgttaat 20840599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 24547176 - 24547243
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| || |||| | |||||| |||||||| ||||||||||| ||||||||||||||    
T  24547176 aggcttaaatatgtacttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaat 24547243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 35920612 - 35920497
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||    |||||| |||||||||||||||||||| |||||||||||||| |||  ||  || |||  ||   |||||||| |    
T  35920612 ggcttaaatatgtatttcatcatagcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttatccttccattgtttaatcatt 35920513  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  35920512 taaaatttcgtccctc 35920497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 16083375 - 16083321
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggt 217  Q
    ||||||||||||||||||||| |||| | ||||||||| ||||||||||||||||    
T  16083375 taaaggcttaaatatgtatttcatccttgcaattaaggatcgtttaaaaattggt 16083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 28771266 - 28771200
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| |  ||||| ||||||||||||||||||||  |||||||||||||    
T  28771266 ggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccatgtaatcgctaat 28771200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 186847 - 186718
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||||||||||| ||||| | ||||||  | | |||||| |||  |||   ||||||| |    
T  186847 ggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctgtatttgctaatctttgcaaactagccttgcaatcattaatcatt 186748  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  186747 taaaatttcgtcctttgaccaacttaatca 186718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 33871339 - 33871468
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||  |||| |||| ||| | |||||||| ||| |||||||||| ||| ||||||||||||||||||| ||  ||||||  ||   |||||||| |    
T  33871339 ggcttaatgatgtgttttgtccttgcaattaagtgtcatttaaaaattagtccctgtaatcgctaattctggcaatttacccttgcattgtttaatcatt 33871438  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  33871439 taaaatttcgtcctttgaccaacttaatca 33871468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 37991198 - 37991311
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||| | || |||||| |||||| |||||||||||||||||||| ||||| ||| |||| || | |||||| |||  |||   |||||||     
T  37991198 aggcttaaatatgaaattcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccttgcaatcattaatcat 37991297  T
Q  266 ttaaaatttcgtcc 279  Q
    || |||||||||||    
T  37991298 ttcaaatttcgtcc 37991311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 8322827 - 8322703
Alignment:
Q  172 aaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaa 271  Q
    |||||||||||| |||| | |||||| |||||||||||||||||||| | ||| ||| |||| || | |||||| |||  |||   ||||||| ||||||    
T  8322827 aaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccccgtattcgttaatccttgcaaactagccttgcaatcattaatcatttaaaa 8322728  T
Q  272 tttcgtccctcaaccaagttaatca 296  Q
    |||||||| |  ||||| |||||||    
T  8322727 tttcgtcctttgaccaacttaatca 8322703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 29646361 - 29646469
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||||||||||| |  ||||| ||||| ||||||||||||||  |||| |||||||| || | |||||| |||  |||   |||||||     
T  29646361 aggcttaaatatgtattttatccttgtaattaggggtcttttaaaaattggtccatgtattcgctaatccttgcaaactagccttccaatcattaatcat 29646460  T
Q  266 ttaaaattt 274  Q
    |||||||||    
T  29646461 ttaaaattt 29646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 32242245 - 32242357
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||| || ||||||| ||||||  ||| ||  ||| ||  ||   |||||||| ||||    
T  32242245 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctgtaatagctaatcatggcaatttactcttgcattgtttaatcatttaa 32242344  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  32242345 aatttcgtccctc 32242357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 35920229 - 35920357
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||  || ||||| || |||||||||||||||||| |||| |||||||| || | ||| || |||  |||   ||||||| ||    
T  35920229 gcttaaatatgtatttgatcattttaattagggatcgtttaaaaattggtcaatgtattcgctaatccttgcaaattagccttgcaatcattaatcattt 35920328  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| |  ||||| |||||||    
T  35920329 aaaatttcgtcctttgaccaacttaatca 35920357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 13362653 - 13362590
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||  | |||||| ||||||||||||||||||||  |||||||||||||    
T  13362653 ttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattggtccttgtaatcgctaat 13362590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 32242671 - 32242541
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||| ||||||||||| ||| ||||| |||||||| || | |||||| |||  |||   |||||||    
T  32242671 aaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtc-ctgtattcgctaatccttgcaaactagccttgcaatcattaatca 32242573  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     ||||||||| |||| |  ||||| |||||||    
T  32242572 tttaaaattttgtcctttgaccaacttaatca 32242541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 40148896 - 40149027
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| |||  ||||| ||||||  | || ||||||||||||||  |||||||| |||| || | ||| |||||| ||||| ||||||||    
T  40148896 aaggctttaatatgtgtttcgtccctgcaattagagctcatttaaaaattggtccatgtaatcgttaatcctagcaaattaccctttcaaagtttaatca 40148995  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||| | || |||||||| || |||||||||    
T  40148996 tttaagaattggtccctcatcccagttaatca 40149027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 6150849 - 6150719
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||| |||  |||| ||| ||||  | | |||||| |||  |||   |||||||     
T  6150849 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgttaatctttgcaaactagccttgcaatcattaatcat 6150750  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  6150749 ttaaaatttcgtcctttgaccaacttaatca 6150719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 11047861 - 11047736
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | ||| || ||||||||||||||||||||| |||| || ||||| || | |||||| |||  |||   ||||||| ||||    
T  11047861 ttaaatatgtatttcatccttgcaagtaggggtcgtttaaaaattggtca-tgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 11047763  T
Q  270 aatttcgtccctcaaccaagttaatca 296  Q
    |||||||||| |  ||||| |||||||    
T  11047762 aatttcgtcctttgaccaacttaatca 11047736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 279
Target Start/End: Original strand, 19892310 - 19892420
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||| |||| || | |||||| |||   ||   ||||||| |||    
T  19892310 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgtaatcattaatcattta 19892409  T
Q  269 aaatttcgtcc 279  Q
    |||||||||||    
T  19892410 aaatttcgtcc 19892420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 20814135 - 20814264
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | ||||||  |||||||||||||||||||  |||| |||||||| || | ||||||   |  |||   |||||||     
T  20814135 aggcttaaatatgtatttcatccttacaattagaggtcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagtattgcaatcattaatcat 20814233  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| | |||||| |||||||    
T  20814234 ttaaaatttcgtcctttaaccaacttaatca 20814264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 282
Target Start/End: Original strand, 186445 - 186534
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctc 282  Q
    ||||| |||||||||||||||| |||| |||||||| ||||||||| ||  || |||  ||   |||||||| |||||||||||||||||    
T  186445 aattaggggtcgtttaaaaattagtcattgtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttcgtccctc 186534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 296
Target Start/End: Complemental strand, 11741953 - 11741816
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| ||| |||||||||||||||| |||| |  ||||| ||||| ||||||||| |||| ||||| ||||||||  | | |||||| |||  ||   ||    
T  11741953 aaaaaaaaagcttaaatatgtatttcatccttgtaattaggggtcatttaaaaatcggtctctgtattcgctaatctttgcaaactagccttgcattctt 11741854  T
Q  259 taatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||| |||||||||||||| |  ||| |||||||||    
T  11741853 taatcatttaaaatttcgtcctttgacccagttaatca 11741816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 5024019 - 5024067
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  5024019 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 5024067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 16156856 - 16156984
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| || | | |||||| ||||||||||||||||||||  |||| ||| |||| || | ||||||  ||  |||   ||||||| ||    
T  16156856 gcttaaatatgtatttcatacttgcaattaggggtcgtttaaaaattggtctatgtattcgttaatccttgcaaactagtcttgcaatcattaatcattt 16156955  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| |  ||||| |||||||    
T  16156956 aaaatttcgtcctttgaccaacttaatca 16156984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 20152806 - 20152910
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtt 291  Q
    |||||||| ||| |||||||||| ||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||||||||||||| |  ||||| ||    
T  20152806 caattaagcgtcatttaaaaattagtctctgtaatcgctaatcctggaaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 20152905  T
Q  292 aatca 296  Q
    |||||    
T  20152906 aatca 20152910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 273
Target Start/End: Complemental strand, 5835851 - 5835748
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| | || ||||||||||||||  ||||| |||||||| || | ||| || |||  ||| ||||||||| ||||    
T  5835851 ttaaatatgtatttcatccttgcaattaggagttgtttaaaaattggtttctgtattcgctaatccttgcaaattagccttgcaacatttaatcatttaa 5835752  T
Q  270 aatt 273  Q
    ||||    
T  5835751 aatt 5835748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 24205018 - 24204960
Alignment:
Q  174 atatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||  | |||||| ||||||||||||||||| ||| |||||||||||||    
T  24205018 atatgtattttatctttgcaattaggggtcgtttaaaaattgatca-tgtaatcgctaat 24204960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 27937430 - 27937379
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    ||||| |||||||||||||| |||| | |||||| |||||||||||||||||    
T  27937430 aaagggttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattg 27937379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 38475033 - 38475144
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||    ||||||| |||| ||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||||| |    
T  38475033 ggcttaaatatgtatttcatcatagcaattaaaggtcatttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcatt 38475132  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  38475133 taaaatttcgtc 38475144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 283
Target Start/End: Original strand, 42063292 - 42063370
Alignment:
Q  205 tttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctca 283  Q
    |||||||||||||| |||||||||||||| |||| ||| | |||   ||||  ||||||| ||||||||| ||||||||    
T  42063292 tttaaaaattggtctctgtaatcgctaatcctggcaaattgcccctgcaaatgttaatcatttaaaattttgtccctca 42063370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 274
Target Start/End: Original strand, 5835617 - 5835730
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattta 260  Q
    ||||||||||||||||||||||| ||   || ||||| || ||||||||||||||||   |||| ||| ||||  | | ||| ||||||  |||| ||||    
T  5835617 aataaaggcttaaatatgtatttcatttttttaattagggatcgtttaaaaattggttcttgtattcgttaatctttgcaaattacccttgcaaagttta 5835716  T
Q  261 atcacttaaaattt 274  Q
    |||| |||||||||    
T  5835717 atcatttaaaattt 5835730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 11740690 - 11740735
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||    
T  11740690 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattg 11740735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 13963267 - 13963206
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||| || |||||||||||| ||||| |||| |  ||||| ||||||||||||||||||||    
T  13963267 ataaattataggcttaaatatatatttcatccttgtaattatgggtcgtttaaaaattggtc 13963206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 19518034 - 19517969
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||| | |||||| |||| ||||||||||| |||  |||| ||||||||    
T  19518034 gcttaaatatgtatttcatccttgcaattaggggtagtttaaaaattagtccatgtattcgctaat 19517969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 37992719 - 37992670
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaat 213  Q
    |||| ||||||||||||||| |||| | |||||| |||||||||||||||    
T  37992719 aaagacttaaatatgtatttcatccatgcaattaggggtcgtttaaaaat 37992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 38442494 - 38442449
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaat 213  Q
    |||||||||||||||| |||| | |||||| |||||||||||||||    
T  38442494 gcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaat 38442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 25231277 - 25231162
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||||||  |||| |||||||| || | ||| ||||||  |||| ||||||||     
T  25231277 aggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccatgtattcgctaatcctagcaaattacccttgcaaactttaatcat 25231178  T
Q  266 ttaaaatttcgtccct 281  Q
    ||||||||||||||||    
T  25231177 ttaaaatttcgtccct 25231162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 44045431 - 44045301
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  44045431 aggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 44045332  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| |||||||| || |||||||||    
T  44045331 ttaaaattttgtccctcatcccagttaatca 44045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 15848086 - 15848203
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    |||||||| |||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||||||  ||||||  ||   ||||||||    
T  15848086 aaggcttatatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcattgtttaatca 15848185  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  15848186 tttaaaatttcgtccctc 15848203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 296
Target Start/End: Complemental strand, 36755520 - 36755387
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| || ||||||||||| || | |||||| |||  |||   |||||    
T  36755520 taaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagccttgcaatcattaat 36755421  T
Q  263 cacttaaaatttcgtccctcaaccaagttaatca 296  Q
    || |||||||||||||| |  ||||| |||||||    
T  36755420 catttaaaatttcgtcctttgaccaacttaatca 36755387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 37895344 - 37895476
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||    
T  37895344 aaaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 37895443  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||| ||| |  ||||| |||||||    
T  37895444 atttaaaatttcatcctttgaccaacttaatca 37895476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 25230102 - 25230229
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||    |||||| |    
T  25230102 ggcttaaatatgtatttaatccctgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaattactaatcatt 25230201  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    ||||||||||||||| | || |||||||    
T  25230202 taaaatttcgtccctgagcccagttaat 25230229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 36382559 - 36382489
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||||| ||||||||    
T  36382559 taaaggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaat 36382489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 11163452 - 11163336
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctct-caaaatttaatca 264  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  || ||||| ||   ||||||||    
T  11163452 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaattta-cctctgcattgtttaatca 11163354  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  11163353 tttaaaatttcgtccctc 11163336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 44713784 - 44713924
Alignment:
Q  156 cataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaa 255  Q
    ||||||| ||| || ||||||||||||| |||| |  ||||||||||||||||||||||||||| |||| |||||||| || | |||||| |||  |||     
T  44713784 cataaaagaaatgcctaaatatgtatttcatccttgtaattaagggtcgtttaaaaattggtcaatgtattcgctaatccttgcaaactagccttgcaat 44713883  T
Q  256 atttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
      ||||||| |||||||||||||| |  ||||| |||||||    
T  44713884 cattaatcatttaaaatttcgtcctttgaccaacttaatca 44713924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 275
Target Start/End: Complemental strand, 6589790 - 6589679
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||  ||||||| |||  ||||| |||||||||||| ||||||||||||||  |||||||| ||||||||| ||| ||||||  |||| |||||||    
T  6589790 aaaggctataatatgtgtttcgtccctgcaattaagggtcatttaaaaattggtccatgtaatcgttaattctggcaaattacccttgcaaagtttaatc 6589691  T
Q  264 acttaaaatttc 275  Q
    | ||||||||||    
T  6589690 atttaaaatttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 2318160 - 2318273
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| |||| |||||||||||||||  |||||||||||||||||| ||  ||||||  ||   |||||||| ||    
T  2318160 gcttaaatatgtatttcatccttgcaatta-gggtagtttaaaaattggtctatgtaatcgctaattctggcaatttacccttgcattgtttaatcattt 2318258  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  2318259 aaaatttcgtccctc 2318273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 45556109 - 45556183
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||||||||||||| |||| | |||||| || ||||||||||||||||| |||||||||||||| ||||    
T  45556109 aaaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtaatcgctaatcctgg 45556183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 10713165 - 10713085
Alignment:
Q  153 aatcataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||| | | ||||||||||||||||| |||| | ||||||||||||||||||||||||||  ||||| ||||||||    
T  10713165 aatcataaattcatggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtttctgtattcgctaat 10713085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 16099455 - 16099323
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| || ||||| || | |||||| |||  |||   ||||||    
T  16099455 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatc 16099356  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | ||||||||| |||| |  ||||| |||||||    
T  16099355 atttaaaatttagtcctttgaccaacttaatca 16099323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 28230169 - 28230057
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| |||  |||||  ||||| ||||| |||||||||||||| ||||||||| |||| || | ||| |||||| ||||| ||||||||    
T  28230169 aaggctttaatatgtgtttcgtccctgtaattatgggtcatttaaaaattggtccctgtaatcgttaatcctagcaaattaccctttcaaagtttaatca 28230070  T
Q  265 cttaaaatttcgt 277  Q
     ||||||||||||    
T  28230069 tttaaaatttcgt 28230057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 36480149 - 36480017
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||| ||||||||||||||| |||| | ||||||||||||||||||||||||||| || || |||||||| || | |||||| |||  |||   |||||     
T  36480149 aaagacttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaatccttgcaaactagccttgcaatcattaata 36480050  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  36480049 atttaaaatttcgtcctttgaccaacttaatca 36480017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 44044112 - 44044228
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||||| |||||| |||| ||||||||||||||| ||||| || ||||| || | |||||| |||   ||   |||||||    
T  44044112 aaggcttaaatatgtatttgatccctgcaattaggggtggtttaaaaattggtccctgtattcactaatccttgaaaactaaccttgtaatcattaatca 44044211  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  44044212 tttaaaatttcgtccct 44044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 3653481 - 3653379
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtta 292  Q
    ||||| ||||| ||||||||||||||  |||||||| |||| |||| ||| ||||||  |||| |||||||| |||||||||||||||||  ||||||||    
T  3653481 aattatgggtcatttaaaaattggtccatgtaatcgttaat-ctggcaaattacccttgcaaagtttaatcatttaaaatttcgtccctcttccaagtta 3653383  T
Q  293 atca 296  Q
    ||||    
T  3653382 atca 3653379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 39423515 - 39423586
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||| |||||| |||| |  ||||| |||||||||||||||||||| |||||||||||||||||||    
T  39423515 ggcttaaatacgtatttcatccttgtaattacgggtcgtttaaaaattggtctctgtaatcgctaattctgg 39423586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 6588686 - 6588795
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| |||  ||   |||||||| ||||    
T  6588686 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcattctttaatcatttaa 6588785  T
Q  270 aatttcgtcc 279  Q
    ||||||||||    
T  6588786 aatttcgtcc 6588795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 6658275 - 6658146
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | ||||||  ||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| |    
T  6658275 ggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttacaatcattaatcatt 6658176  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||| |||| |  ||||| |||||||    
T  6658175 taaaatttagtcctttgaccaacttaatca 6658146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 45556478 - 45556409
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||| ||||||||    
T  45556478 aaaggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtcgctgtattcgctaat 45556409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 3555247 - 3555307
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgta 224  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||    
T  3555247 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgta 3555307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 6657877 - 6657993
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||  |||||||||||||||||||| |||||||| |||||  ||| ||  |||||   ||   ||||||||     
T  6657877 aggcttaaatatgtatttgatccttgcaatttggggtcgtttaaaaattggtccctgtaatcactaatcatggcaatttacccctgcattgtttaatcat 6657976  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  6657977 ttaaaatttcgtccctc 6657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 13692650 - 13692519
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||| ||||||| |||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||    
T  13692650 aaaggtttaaata-gtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 13692552  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  13692551 atttaaaatttcgtcctttgaccaacttaatca 13692519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 44714189 - 44714074
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||| ||| |||| | |||||| |||||||||||||||| ||| ||||||| |||||| |||| ||  ||||||  ||   ||||||||     
T  44714189 aggcttaaatatgt-tttcatccttgcaattaggggtcgtttaaaaattagtccctgtaattgctaatcctggcaatttacccttgcattgtttaatcat 44714091  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  44714090 ttaaaatttcgtccctc 44714074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 16099055 - 16099170
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| || | | |||||| ||||| |||||||||||||| |||||||| ||||| |||| ||  |||||   ||   |||||||| |    
T  16099055 ggcttaaatatgtatttgattcttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccctgcattgtttaatcatt 16099154  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  16099155 taaaatttcgtccctc 16099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 11163054 - 11163120
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||  | ||||||| ||||||||||||||||||| ||||| ||||||||    
T  11163054 ggcttaaatatgtatttgatctttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaat 11163120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 39498302 - 39498425
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||| |||||||||  ||||||||| |||| |  ||||| |||||||||||||||||||| ||||||||| |||| |||| ||  |||||   ||       
T  39498302 ataaaaaaaaggctta--tatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctacattg 39498399  T
Q  257 tttaatcacttaaaatttcgtccctc 282  Q
    |||||||| |||||||||||||||||    
T  39498400 tttaatcatttaaaatttcgtccctc 39498425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 2318941 - 2318888
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggt 217  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||    
T  2318941 aaaggcttaaatatgtatttcatccttccaattaggggtcgtttaaaaattggt 2318888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 9076495 - 9076366
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||||| | | |||||| |||||||||||||||||||| | ||| ||| |||| || | ||||||  ||  |||   ||||||| |    
T  9076495 ggcttaaatatgtattttattcttgcaattaggggtcgtttaaaaattggtctccgtattcgttaatccttgcaaactagtcttgcaatcattaatcatt 9076396  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||  | |||||| |||||||    
T  9076395 taaaatttcgtcatttaaccaacttaatca 9076366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 36479719 - 36479784
Alignment:
Q  169 cttaaatatgtattttatccctt-caattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| || |||||| ||||||||||||||||||||  |||||||||||||    
T  36479719 cttaaatatgtatttcatcctttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat 36479784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 275
Target Start/End: Complemental strand, 3556437 - 3556329
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||  |||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| || | |||||| |||  ||   |||||||| |    
T  3556437 ggcttaaatatacatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgttaatccttgcaaactagccttgcattctttaatcatt 3556338  T
Q  267 taaaatttc 275  Q
    |||||||||    
T  3556337 taaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 28228669 - 28228777
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| |||||| ||||| |||||||||||||| ||||||||| ||||  ||| ||| ||| || ||||| ||||||||     
T  28228669 aggctttaatatgtgtttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcgtggcaaattactctttcaaagtttaatcat 28228768  T
Q  266 ttaaaattt 274  Q
    || ||||||    
T  28228769 ttgaaattt 28228777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 36382160 - 36382276
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||| ||||||||| |||| | |||||| || ||||||||||||||||| || ||||||||||| |||  ||  ||||||  ||   ||||||||     
T  36382160 aggcttaagtatgtatttcatccttgcaattagggttcgtttaaaaattggtccctataatcgctaatcctgacaatttacccttgcattgtttaatcat 36382259  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||| ||||||    
T  36382260 ttaaaatttcatccctc 36382276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 37895772 - 37895660
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||| ||||  | |||||||||||| |||| ||  ||| ||  ||   |||||||| ||||    
T  37895772 ttaaatatgtatttcatccttgcaattatgggtcgtttaaaaaatggttcccgtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaa 37895673  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  37895672 aatttcgtccctc 37895660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Complemental strand, 39498708 - 39498600
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| || |||||||||||||||||  |||| |||||||| || | |||||| |||  |||   |||||||     
T  39498708 aggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 39498609  T
Q  266 ttaaaattt 274  Q
    |||||||||    
T  39498608 ttaaaattt 39498600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 253 - 296
Target Start/End: Complemental strand, 11349547 - 11349504
Alignment:
Q  253 aaaatttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  11349547 aaaatttaatcatttaaaatttcgtccctcaacccagttaatca 11349504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 39423944 - 39423877
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||| || || || ||||||||    
T  39423944 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccctatattcgctaat 39423877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 15848517 - 15848387
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||| |||||| |||| | |||||| |||||||||||||||||||   |||| |||||||| || |  ||||| |||  |||   |||||||     
T  15848517 aggcttaaataagtatttcatccttgcaattaggggtcgtttaaaaattggtttatgtattcgctaatccttgcgaactaaccttgcaatcattaatcat 15848418  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  15848417 ttaaaatttcgtcctttgaccaacttaatca 15848387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 39936675 - 39936546
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| |||||| | || |||||||| ||||||  |||||||| |||| |||| ||| ||||||  |||| ||||||||     
T  39936675 aggctttaatatgtgtttcgtccctgcaattaggcgtggtttaaaa-ttggtccttgtaatcgttaatcctggcaaattacccttgcaaagtttaatcat 39936577  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  39936576 ttaaaatttcgtcctttgaccaatttaatca 39936546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 202787 - 202670
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||| || ||||||| |||| |||||  ||||| ||||| |||||||||| |||  |||||||| |||| |||| ||| || |||  || | |||||||    
T  202787 aaaggttttaatatgtgttttgtccctgtaattaggggtcatttaaaaattcgtccatgtaatcgttaatcctggcaaattagccttgcagagtttaatc 202688  T
Q  264 acttaaaatttcgtccct 281  Q
    | ||||||||||||||||    
T  202687 atttaaaatttcgtccct 202670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 43742105 - 43741976
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| |||||||||||  ||||| |||||   |||| ||||||||||||||  |||||||  |||| |||  ||| ||||||  |||| ||||||||     
T  43742105 aggcttcaatatgtatttcgtccctgcaattggaggtcatttaaaaattggtccatgtaatcattaatcctgacaaattacccttgcaaagtttaatcat 43742006  T
Q  266 ttaaaatttcgtccctcaaccaagttaatc 295  Q
    |||||| ||  |||||||||| ||||||||    
T  43742005 ttaaaaattgatccctcaacccagttaatc 43741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 34447811 - 34447875
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgc 229  Q
    ||||||||||||||||||| |||| |  ||||| ||||| |||||||||||||| || |||||||    
T  34447811 aaggcttaaatatgtatttcatccttgtaattaggggtcatttaaaaattggtccctataatcgc 34447875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 41587260 - 41587363
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtt 291  Q
    |||||||| ||| |||||||||||||| ||||||||| |||| |||| ||| ||||||  ||   |||||||| |||||||||| ||| | |||||| ||    
T  41587260 caattaagagtcatttaaaaattggtc-ctgtaatcgttaatcctggaaaattacccttgcattgtttaatcatttaaaatttcatcctttaaccaactt 41587358  T
Q  292 aatca 296  Q
    |||||    
T  41587359 aatca 41587363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 22051421 - 22051310
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| || | | ||||||  ||| ||||||||||| ||| |||||||||||||| || | ||  ||||||  ||   |||||||| |    
T  22051421 ggcttaaatatgtatttcattcttgcaattagaggttgtttaaaaattagtctctgtaatcgctaatcctagcaatttacccttgcattgtttaatcatt 22051322  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  22051321 taaaatttcgtc 22051310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 30729621 - 30729687
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| | ||||||   |||||||||||||||||| || || ||||||||    
T  30729621 ggcttaaatatgtatttcatccttgcaattagacgtcgtttaaaaattggtccctatattcgctaat 30729687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 34448224 - 34448094
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||| |||||||| |||| | |||||| |||| ||||||||||||||| || || ||| |||| || | ||||||  ||  |||   |||||||     
T  34448224 aggcttaaacatgtatttcatccttgcaattaggggttgtttaaaaattggtccctatattcgttaatccttgcaaactagtcttgcaatcattaatcat 34448125  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  34448124 ttaaaatttcgtcctttgaccaacttaatca 34448094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 81)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 34849011 - 34849126
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||||||||||| ||||| |||||||| || | ||| ||||||  ||||||||||||| |    
T  34849011 ggcttaaatatgtatttaatccttgcaattaggggtcttttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34849110  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  34849111 taaaatttcgtccctc 34849126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 34850493 - 34850378
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | ||| ||||||  ||||||||||||| |    
T  34850493 ggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaattacccttgcaaaatttaatcatt 34850394  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||| ||||||    
T  34850393 taaaatttcatccctc 34850378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 294
Target Start/End: Complemental strand, 46900030 - 46899901
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||||||||| ||||||||||||||| |||| ||||||||||| | |||||| |||  |||   |||||||    
T  46900030 aaggcttaaatatgtatttcatccatgcaattaagggtcatttaaaaattggtcaatgtattcgctaattcttgcaaactagccttgcaatcattaatca 46899931  T
Q  265 cttaaaatttcgtccctcaaccaagttaat 294  Q
     |||||||||||||||| | || |||||||    
T  46899930 tttaaaatttcgtccctgagcccagttaat 46899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 6367562 - 6367677
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |    
T  6367562 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatt 6367661  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  6367662 taaaatttcgtccctc 6367677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 25647880 - 25647999
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| |||| ||  |||||   ||  |||||||    
T  25647880 taaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattatttaat 25647979  T
Q  263 cacttaaaatttcgtccctc 282  Q
    || |||||||||||||||||    
T  25647980 catttaaaatttcgtccctc 25647999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 6367991 - 6367861
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  6367991 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 6367892  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  6367891 ttaaaatttcgtcctttgaccaacttaatca 6367861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 158 - 293
Target Start/End: Original strand, 17691210 - 17691345
Alignment:
Q  158 taaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaat 257  Q
    ||||| |||||||| |||||||||||  ||| | ||| || |||||||||||||||||||| |||||||||||||| || | ||| ||  ||  ||   |    
T  17691210 taaaaaaaaggctttaatatgtatttcgtccttacaagtaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaattagtcttgcattgt 17691309  T
Q  258 ttaatcacttaaaatttcgtccctcaaccaagttaa 293  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17691310 ttaatcatttaaaatttcgtccctcaaccaagttaa 17691345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 35473630 - 35473709
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaacta 245  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||||||    
T  35473630 aggcttaaatatgtatttaatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaaacta 35473709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 26024421 - 26024538
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| || | | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   ||||||||    
T  26024421 aaggcttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatca 26024520  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||| ||||||||||    
T  26024521 tttaaaagttcgtccctc 26024538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 26024820 - 26024691
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| || | ||||||  ||  |||   ||||||| |    
T  26024820 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagtcttgcaatcattaatcatt 26024721  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  26024720 taaaatttcgtcctttgaccaatttaatca 26024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 19018058 - 19017942
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||||||||||| | ||||||  |||||||||||||||||||  |||| |||||||| |||| ||  ||||||  ||  |||||||||     
T  19018058 aggcttaaatatgtattttatccttgcaattacaggtcgtttaaaaattggtccatgtattcgctaatcctggcaatttacccttgcattatttaatcat 19017959  T
Q  266 ttaaaatttcgtccctc 282  Q
    ||||||||| |||||||    
T  19017958 ttaaaattttgtccctc 19017942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 19515818 - 19515934
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||||| ||||||||| ||  ||||||  ||   |||||| |     
T  19515818 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctttgtaatcgttaattctggaaatttacccttgcattgtttaattat 19515917  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  19515918 ttaaaatttcgtccctc 19515934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 30711756 - 30711644
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  30711756 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 30711657  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  30711656 ttaaaatttcgtc 30711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 282
Target Start/End: Original strand, 40772502 - 40772622
Alignment:
Q  162 ataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaa 261  Q
    |||| ||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||  ||  ||| ||  ||   |||||    
T  40772502 ataatggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttactcttgcattgtttaa 40772601  T
Q  262 tcacttaaaatttcgtccctc 282  Q
    ||| |||||||||||||||||    
T  40772602 tcatttaaaatttcgtccctc 40772622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 296
Target Start/End: Original strand, 183211 - 183350
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    ||||| ||| ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||      
T  183211 ataaagtaatggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatc 183310  T
Q  257 tttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
     ||||||| ||||||||| |||| |  ||||| |||||||    
T  183311 attaatcatttaaaatttagtcctttgaccaacttaatca 183350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 34464449 - 34464560
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||||||||||  ||| ||  ||||||  |||  |||||||| |    
T  34464449 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcatt 34464548  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  34464549 taaaatttcgtc 34464560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 46899061 - 46899188
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||||| | |||||| | |  |||   ||||||| |    
T  46899061 ggcttaaatatgtatttcatccatgcaattaggggtcgtttaaaaattggtccatgtattcgctaattcttgcaaactagctttgcaatcattaatcatt 46899160  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    ||||||||||||||| | || |||||||    
T  46899161 taaaatttcgtccctgagcccagttaat 46899188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 40210801 - 40210683
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||| ||||||||||||||| |||  | |||||| ||| ||||||||||||||||  |||||||||||||||||| ||  ||||||  ||   |||||||    
T  40210801 aaagacttaaatatgtatttcatcattgcaattaggggccgtttaaaaattggtctttgtaatcgctaattctggcaatttacccttgcattgtttaatc 40210702  T
Q  264 acttaaaatttcgtccctc 282  Q
    | |||||||||||||||||    
T  40210701 atttaaaatttcgtccctc 40210683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 43759260 - 43759138
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||||  |||||||||||||||||| |||| | |||||| ||||||||||||||| |||| ||||| |||||||| || | |||||| |||  |||      
T  43759260 ataaaatttaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgtattcgctaatccttgcaaactagccttgcaatc 43759161  T
Q  257 tttaatcacttaaaatttcgtcc 279  Q
    || ||||| ||||||||||||||    
T  43759160 ttcaatcatttaaaatttcgtcc 43759138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 40439615 - 40439503
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaa-gggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    ||||||||||||||| |||| | ||||||| ||||||||||||||||| ||| |||| |||||||| || | |||||| ||||||||| |||||||| ||    
T  40439615 cttaaatatgtatttcatccttgcaattaatgggtcgtttaaaaattgatca-tgtattcgctaatccttgcaaactaacctctcaaagtttaatcattt 40439517  T
Q  268 aaaatttcgtccct 281  Q
    |||| || ||||||    
T  40439516 aaaaattggtccct 40439503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 23209756 - 23209684
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  23209756 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctgg 23209684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 34464878 - 34464762
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||| |||||||||||||||  |||||||||||||  ||| ||  ||||||  |||  ||||||||     
T  34464878 aggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcaatgtttaatcat 34464779  T
Q  266 ttaaaatttcgtccctc 282  Q
    ||||||||| |||||||    
T  34464778 ttaaaattttgtccctc 34464762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 47999521 - 47999405
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||||||||||||  ||| ||  |||||   ||  |||||||||     
T  47999521 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcttggcaatttacccctgcattatttaatcat 47999422  T
Q  266 ttaaaatttcgtccctc 282  Q
    ||||||| |||||||||    
T  47999421 ttaaaatatcgtccctc 47999405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 1103892 - 1103777
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||| ||||| |||| | ||||||| ||||||||||||||||||| ||||| |||||||| || | ||||||  ||  |||   ||||||    
T  1103892 aaaggcttaaatatatatttcatccttgcaattaaaggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatc 1103793  T
Q  264 acttaaaatttcgtcc 279  Q
    | ||||||||||||||    
T  1103792 atttaaaatttcgtcc 1103777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 294
Target Start/End: Complemental strand, 5735143 - 5735012
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||||||||||||||||||| |||||| |||||| |  ||||||||||||||||   |||| |||||||| || | |||||| |||  |||   |||||    
T  5735143 taaaggcttaaatatgtatttcatccctgcaattaggaatcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttacaatcattaat 5735044  T
Q  263 cacttaaaatttcgtccctcaaccaagttaat 294  Q
    || |||||||||||||||| | || |||||||    
T  5735043 catttaaaatttcgtccctgagcccagttaat 5735012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 17661850 - 17661980
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| | |  |||   |||||||    
T  17661850 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc-ctgtattcgctaatccttgcaaactagcattgcaatcattaatca 17661948  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||||||||||||| |  ||||| |||||||    
T  17661949 tttaaaatttcgtcctttgaccaacttaatca 17661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 24009977 - 24009854
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| ||||| |||||| ||||||| |||| | |||||| || |||||||||||||||||| ||||||||| ||| |||| ||  ||||||  ||   ||    
T  24009977 aaaaaaaaggtttaaatttgtatttcatccttgcaattagggatcgtttaaaaattggtcattgtaatcgccaatcctggcaatttacccttgcattgtt 24009878  T
Q  259 taatcacttaaaatttcgtccctc 282  Q
    |||||| |||||||||||||||||    
T  24009877 taatcatttaaaatttcgtccctc 24009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 277
Target Start/End: Original strand, 37578195 - 37578302
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| ||||    
T  37578195 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttccaatcattaatcatttaa 37578294  T
Q  270 aatttcgt 277  Q
    ||||||||    
T  37578295 aatttcgt 37578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 41098732 - 41098799
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| || | | |||||| |||||||||||||||||||| ||||||||||||||    
T  41098732 aggcttaaatatgtatttcattcttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaat 41098799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 17662281 - 17662163
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||  |||||||||||||||||||  || |||||| |||| |||| ||  ||||||  ||   |||||||    
T  17662281 aaaggcttaaatatgtatttcatccttgcaatttggggtcgtttaaaaattggttcctttaatcgttaatcctggcaatttacccttgcattgtttaatc 17662182  T
Q  264 acttaaaatttcgtccctc 282  Q
    | |||||||||||||||||    
T  17662181 atttaaaatttcgtccctc 17662163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 183621 - 183504
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaaggg-tcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    |||||||||||||||||| |||| |  ||||| ||| ||||||||||||||||| |||||||||||||| || | ||  |||||   ||  |||||||||    
T  183621 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgctaatcctagcaatttacccctgcattatttaatca 183522  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  183521 tttaaaatttcgtccctc 183504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 31197065 - 31197189
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||||| |||||| ||||| |||||||||| ||| ||||| ||| |||| |||| ||| ||||||  ||     |||||| |    
T  31197065 ggcttaaatatgtatttcatccctgcaattaggggtcatttaaaaatttgtctctgtattcgttaatcctggaaaattacccttgca-----taatcatt 31197159  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| ||||||| || |||||||||    
T  31197160 taaaatttcatccctcatcctagttaatca 31197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 32917688 - 32917559
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| || | | ||||||||||||||||||||||||||| ||||| ||| |||| || | |||||| |||  |||   ||||||| |    
T  32917688 ggcttaaatatgtatttcattcttgcaattaagggtcgtttaaaaattggtctctgtattcgttaatccttgcaaactagccttgcaatcattaatcatt 32917589  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||| ||| |  ||||| |||||||    
T  32917588 taaaatttcatcctttgaccaacttaatca 32917559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 7231684 - 7231620
Alignment:
Q  160 aaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgta 224  Q
    ||||||||||||||||||||||||||||| |  ||||| | ||||||||||||||| ||||||||    
T  7231684 aaataaaggcttaaatatgtattttatccttgtaattaggagtcgtttaaaaattgatcactgta 7231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 35152342 - 35152458
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | ||||||  ||||||||||||||||||| || ||||||||||| |||  ||  ||||||  ||   ||||||||     
T  35152342 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattggtccctataatcgctaatactgccaatttacccttacattgtttaatcat 35152441  T
Q  266 ttaaaatttcgtccctc 282  Q
    ||||||||| |||||||    
T  35152442 ttaaaattttgtccctc 35152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 35152768 - 35152692
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||| ||| |||||||||||||||| |||| | |||||| |||||||||||||||| ||| ||||| ||||||||    
T  35152768 ataaaagaaaagcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattagtctctgtattcgctaat 35152692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 36694677 - 36694565
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| | || ||||||||||||||| |||||||||||||| |||  ||  ||||||  ||   ||||||||     
T  36694677 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 36694578  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  36694577 ttaaaatttcgtc 36694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 36710778 - 36710666
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| | || ||||||||||||||| |||||||||||||| |||  ||  ||||||  ||   ||||||||     
T  36710778 aggcttaaatatgtatttcatccttgcaattaggtgttgtttaaaaattggtctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcat 36710679  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  36710678 ttaaaatttcgtc 36710666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 47999123 - 47999235
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| || ||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| |    
T  47999123 ggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 47999222  T
Q  267 taaaatttcgtcc 279  Q
    |||||||| ||||    
T  47999223 taaaatttagtcc 47999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 5734009 - 5734075
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||  ||| | |||||| ||||||||||||||||||||| |||||||||||||    
T  5734009 aggcttaaatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtca-tgtaatcgctaat 5734075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 36694281 - 36694348
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||    
T  36694281 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaat 36694348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 36710382 - 36710449
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| ||||||||    
T  36710382 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctatgtattcgctaat 36710449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 278
Target Start/End: Complemental strand, 41099157 - 41099050
Alignment:
Q  171 taaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaa 270  Q
    ||||||||||||| |||| | ||||||  ||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| |||||    
T  41099157 taaatatgtatttcatccttacaattagtggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactaaccttacaatcattaatcatttaaa 41099058  T
Q  271 atttcgtc 278  Q
    ||||||||    
T  41099057 atttcgtc 41099050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 42248469 - 42248588
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||| ||||||||||||||| |||| | ||||||  |||||||||||||||||||  |||| ||||||||  ||| ||  ||||||  ||   ||||||    
T  42248469 taaagacttaaatatgtatttcatccttgcaattagtggtcgtttaaaaattggtctttgtagtcgctaatcgtggcaatttacccttgcattgtttaat 42248568  T
Q  263 cacttaaaatttcgtccctc 282  Q
    || |||||||||||||||||    
T  42248569 catttaaaatttcgtccctc 42248588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 7820950 - 7821020
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||||| |||| | |||||| ||||| ||||| |||| ||| ||||||||||||||    
T  7820950 taaaggcttaaatatgtatttcatccttgcaattaggggtcctttaataattagtccctgtaatcgctaat 7821020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 13914494 - 13914380
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | ||||||  ||| |||||||||||||||  ||||||||||||| |||| ||  ||||||   |   |||||||| ||    
T  13914494 gcttaaatatgtatttcatccttgcaattagaggttgtttaaaaattggtccatgtaatcgctaatcctggcaatttacccttgtattgtttaatcattt 13914395  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  13914394 aaaatttcgtccctc 13914380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 282
Target Start/End: Original strand, 14878980 - 14879086
Alignment:
Q  176 atgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttc 275  Q
    ||||||||||||| | |||||| |||||||||||||||||||   |||||||||||||  ||| ||  ||||||  ||   |||||||| ||||||||||    
T  14878980 atgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcttggcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T
Q  276 gtccctc 282  Q
    |||||||    
T  14879080 gtccctc 14879086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 40435341 - 40435411
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||| |||||||||||||| |||| | |||||| ||||||||||||||||||||| |||| ||| ||||    
T  40435341 taaaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtcattgtattcgttaat 40435411  T

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Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 296
Target Start/End: Complemental strand, 49723147 - 49723025
Alignment:
Q  174 atatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatt 273  Q
    |||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| ||| ||||   ||||||| ||||||||    
T  49723147 atatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagcctttcaatcattaatcatttaaaatt 49723048  T
Q  274 tcgtccctcaaccaagttaatca 296  Q
    || ||| |  ||||| |||||||    
T  49723047 tcatcctttgaccaacttaatca 49723025  T

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Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 8898510 - 8898591
Alignment:
Q  160 aaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaa 241  Q
    ||||||||||||||  |||| |||  ||| | |||||| | ||| |||||||||| ||||||||||||||||||||||||||    
T  8898510 aaataaaggcttaatgatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtcactgtaatcgctaattctggtaa 8898591  T

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Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 238
Target Start/End: Complemental strand, 37578622 - 37578549
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    ||||||||||||||||||| |||| | |||||  |||||||||||||||||||   ||||||||||||| ||||    
T  37578622 aaggcttaaatatgtatttcatccttgcaattgggggtcgtttaaaaattggtttttgtaatcgctaatcctgg 37578549  T

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Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 40772890 - 40772821
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||| | |||||| ||||||||| ||||| |||| ||||| ||||||||    
T  40772890 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttgaaaatcggtccctgtattcgctaat 40772821  T

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Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 17692610 - 17692547
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| | |||||| ||||||||||||||| |||| |||| |||||||||    
T  17692610 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatcggtccctgttatcgctaat 17692547  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 24009575 - 24009626
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  24009575 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 24009626  T

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Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 30711327 - 30711442
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||| |||||||||||| || || ||||||||||| || | ||  || |||  ||   |||||||| |    
T  30711327 ggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatctctataatcgctaatcctagcaatttatccttgcattgtttaatcatt 30711426  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  30711427 taaaatttcgtccctc 30711442  T

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Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 282
Target Start/End: Original strand, 1103463 - 1103576
Alignment:
Q  171 taaatatgtattttatcccttcaattaagggtcgtttaaaaat--tggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||| |||  | ||||||  ||||||||||||||  ||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||    
T  1103463 taaatatgtatttcatctttgcaattagaggtcgtttaaaaatattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 1103562  T
Q  269 aaatttcgtccctc 282  Q
    ||||||||||||||    
T  1103563 aaatttcgtccctc 1103576  T

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Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 4960541 - 4960655
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||  | |||||| ||||||||||||||||| ||  |||| |||||||| || | ||  ||||||  ||   |||||||| ||    
T  4960541 gcttaaatatgtatttcatcattgcaattaggggtcgtttaaaaattgctctttgtattcgctaatccttgcaatttacccttgcattgtttaatcattt 4960640  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  4960641 aaaatttcgtccctc 4960655  T

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Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 51019780 - 51019726
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||| || |||||| ||| || ||||||||||||||||||||    
T  51019780 aaaggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtc 51019726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 7821384 - 7821316
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| |||  | ||||||| |||||||||||||||||||| |||| ||||||||    
T  7821384 aaaggcttaaatatgcatttcatcattgcaattaaaggtcgtttaaaaattggtca-tgtattcgctaat 7821316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 1841458 - 1841570
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||| |||||||| ||   | |||||||| |||||||||||||||||| | |||||||||||| |||  ||  ||||||  ||   ||||||||     
T  1841458 aggcttaaacatgtatttcatatttgcaattaagagtcgtttaaaaattggtctccgtaatcgctaatcctgacaatttacccttacattgtttaatcat 1841557  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  1841558 ttaaaatttcgtc 1841570  T

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Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 278
Target Start/End: Complemental strand, 10304264 - 10304172
Alignment:
Q  186 tcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtc 278  Q
    ||||| ||| || ||||| |||||||| |||||| |||| ||| ||||||||| ||  | || || ||||||||||||| |||||||||||||    
T  10304264 tccctgcaaataggggtcatttaaaaaatggtcaatgtattcgttaattctggcaatttgccttcccaaaatttaatcatttaaaatttcgtc 10304172  T

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Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 19017627 - 19017695
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | |||||| |||| |||||||||||| |  ||||| ||||||||    
T  19017627 aaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattgatttctgtattcgctaat 19017695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 22103855 - 22103819
Alignment:
Q  246 ccctctcaaaatttaatcacttaaaatttcgtccctc 282  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22103855 ccctgtcaaaatttaatcacttaaaatttcgtccctc 22103819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 276
Target Start/End: Original strand, 30326521 - 30326605
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcg 276  Q
    |||||| | ||| |||||||||| ||| ||||||||||||||||||||||  ||||||  ||   |||||||| |||||||||||    
T  30326521 caattaggcgtcatttaaaaattagtctctgtaatcgctaattctggtaatttacccttgcattgtttaatcatttaaaatttcg 30326605  T

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Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 281
Target Start/End: Original strand, 32132302 - 32132418
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| |||  ||||| ||||||  |||| |||||||||| |||  |||||||| |||| || | ||| ||| ||  |||| ||||||||    
T  32132302 aaggctttaatatgtgtttcgtccctccaattagtggtcatttaaaaattcgtccatgtaatcgttaatccttgcaaattactcttacaaagtttaatca 32132401  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  32132402 attaaaatttcgtccct 32132418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 40210367 - 40210499
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||| |||||||||||||| |||| | ||||||  |||||||||||| ||||||  |||| |||||||| || | ||||||  ||  |||   ||||||    
T  40210367 aaaggtttaaatatgtatttcatccttgcaattagtggtcgtttaaaatttggtctttgtattcgctaatccttgcaaactagacttgcaatcattaatc 40210466  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  40210467 atttaaaatttcgtcctttgaccaacttaatca 40210499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 46163033 - 46163141
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||  |  ||||| ||||||||||||||||||||  ||||||||||||| |||  ||  ||||||  ||   |||||||| ||||    
T  46163033 ttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaa 46163132  T
Q  270 aatttcgtc 278  Q
    |||||||||    
T  46163133 aatttcgtc 46163141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 51015632 - 51015684
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||| || |||||| ||| || ||||||||||||||||||||    
T  51015632 aggcttaaatatgtaattgatccctgcaaataggggtcgtttaaaaattggtc 51015684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 13914067 - 13914134
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||| ||||||| |||| | |||||| |||||||||||||||| |||  |||| ||||||||    
T  13914067 aggcttaaatgtgtatttcatccttgcaattaggggtcgtttaaaaattagtccatgtattcgctaat 13914134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 278
Target Start/End: Original strand, 17188979 - 17189065
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtc 278  Q
    |||||| | ||| |||||||||| ||| |||||||||||||| |||| ||  ||||||  ||  ||||||||| |||||||||||||    
T  17188979 caattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtc 17189065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 19227047 - 19227077
Alignment:
Q  252 caaaatttaatcacttaaaatttcgtccctc 282  Q
    |||||||||||||||||||||||||||||||    
T  19227047 caaaatttaatcacttaaaatttcgtccctc 19227077  T

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Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 23209352 - 23209408
Alignment:
Q  156 cataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaatt 214  Q
    ||||||||||||| |||||||||||||| |||| | |||||| ||||||||||||||||    
T  23209352 cataaaataaagg-ttaaatatgtatttcatccttgcaatta-gggtcgtttaaaaatt 23209408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 32133353 - 32133239
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagg-gtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    |||||| ||||||| ||| || ||| |||||| || ||| |||||||||| |||  |||||||| ||||  ||| ||| || |||| |||| ||||||||    
T  32133353 aggctttaatatgtgtttcattcctgcaattagggagtcctttaaaaattcgtccttgtaatcgttaatcttggcaaattagcctcgcaaagtttaatca 32133254  T
Q  265 cttaaaatttcgtcc 279  Q
     ||||||||||||||    
T  32133253 tttaaaatttcgtcc 32133239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 13300331 - 13300266
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||  | |||||| | |||||||||||||||||| ||||| || |||||    
T  13300331 gcttaaatatgtatttcatcattgcaattaggcgtcgtttaaaaattggtctctgtattcactaat 13300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 19322886 - 19322939
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaatt 214  Q
    |||| |||||||||||||||||| |||| |  ||||| ||||||||||||||||    
T  19322886 aatataggcttaaatatgtatttcatccttataattacgggtcgtttaaaaatt 19322939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 48691173 - 48691226
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaacta 245  Q
    |||||| |||||||||||||||||||| ||||| ||| ||||||| | ||||||    
T  48691173 caattaggggtcgtttaaaaattggtcgctgtattcgttaattcttgcaaacta 48691226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 48779103 - 48779144
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||| ||||||||||||||||| || ||||||||||||||    
T  48779103 caattaggggtcgtttaaaaattgatctctgtaatcgctaat 48779144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 20760906 - 20760802
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtt 291  Q
    |||||| | ||| |||||||||| ||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||||||||||||| |  ||||| ||    
T  20760906 caattaggcgtcatttaaaaattagtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 20760807  T
Q  292 aatca 296  Q
    |||||    
T  20760806 aatca 20760802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 279
Target Start/End: Original strand, 21444678 - 21444706
Alignment:
Q  251 tcaaaatttaatcacttaaaatttcgtcc 279  Q
    |||||||||||||||||||||||||||||    
T  21444678 tcaaaatttaatcacttaaaatttcgtcc 21444706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 215
Target Start/End: Complemental strand, 26234478 - 26234430
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    ||||||||||||||||| |||||| ||| || |||||| ||||||||||    
T  26234478 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattg 26234430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 42533027 - 42533071
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaatt 214  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||    
T  42533027 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt 42533071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 5e-25; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 18831338 - 18831460
Alignment:
Q  156 cataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaa 255  Q
    ||||| || ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||||||  ||||||  ||      
T  18831338 cataatattaaggcttaaatatgtatttgatccttacaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttacccttgcatt 18831437  T
Q  256 atttaatcacttaaaatttcgtc 278  Q
     |||||||| |||||||||||||    
T  18831438 gtttaatcatttaaaatttcgtc 18831460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 55867550 - 55867428
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||||  |||||||| |||| || | ||||||||||  ||   ||    
T  55867550 aaaatataggcttaaatatgtatttgatccctgcaattaggggtcgtttaaaaattggtccatgtaatcgttaatccttgcaaactacccttgcattgtt 55867451  T
Q  259 taatcacttaaaatttcgtccct 281  Q
    |||||| ||||||||||||||||    
T  55867450 taatcatttaaaatttcgtccct 55867428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 13058036 - 13058152
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||||||  |||||   ||   ||||||||     
T  13058036 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggtaatttacccctgcattgtttaatcat 13058135  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  13058136 ttaaaatttcgtccctc 13058152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 50419066 - 50418950
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| || ||||||||||| |||| || |||||||  ||   ||||||||     
T  50419066 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctctaatcgctaatcctggcaatctacccttgcattgtttaatcat 50418967  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  50418966 ttaaaatttcgtccctc 50418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 296
Target Start/End: Original strand, 50418658 - 50418797
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| || | |||||| |||  |||      
T  50418658 ataaaatataggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatccttgcaaactagccttgcaatc 50418757  T
Q  257 tttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
     ||||||| |||||||||||||| |  ||||| |||||||    
T  50418758 attaatcatttaaaatttcgtcctttgaccaatttaatca 50418797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 24349673 - 24349803
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  24349673 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcat 24349772  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||  || |||||||||    
T  24349773 ttaaaatttcgtccctctccccagttaatca 24349803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 24711108 - 24711226
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  |||| |  ||   |||||||    
T  24711108 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttaccgttgcattgtttaatc 24711207  T
Q  264 acttaaaatttcgtccctc 282  Q
    | |||||||||||||||||    
T  24711208 atttaaaatttcgtccctc 24711226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 164 - 281
Target Start/End: Complemental strand, 32063767 - 32063650
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||| |||||||||||| ||||| |||||| ||||| |||||||||||||  ||||||||| |||| |||| ||| ||||||  |||| |||||||    
T  32063767 aaaggctttaatatgtattttgtccctgcaattaggggtcatttaaaaattggtttctgtaatcgttaatactggcaaattacccttgcaaagtttaatc 32063668  T
Q  264 acttaaaatttcgtccct 281  Q
    | |||||||| |||||||    
T  32063667 atttaaaattccgtccct 32063650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 39539347 - 39539234
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||||||||| |||||||| ||||||| | ||| || |||  ||   ||||||||     
T  39539347 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtcaatgtaatcgttaattcttgcaaattagccttgcattctttaatcat 39539248  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  39539247 ttaaaatttcgtcc 39539234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 161 - 296
Target Start/End: Complemental strand, 51692953 - 51692818
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattta 260  Q
    |||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||    
T  51692953 aatataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcatta 51692854  T
Q  261 atcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||| |||||||||||||| |  ||||| |||||||    
T  51692853 atcatttaaaatttcgtcctttgaccaacttaatca 51692818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 34765379 - 34765492
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||| ||||  |||| |||||||| || | |||||| |||  |||   |||||||     
T  34765379 aggcttaaatatgtattttatccttgcaattaagggtcgtttaaaaatcggtccttgtattcgctaatccttgcaaactagccttgcaatcattaatcat 34765478  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  34765479 ttaaaatttcgtcc 34765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 1179231 - 1179099
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||||||||||||||||||||||  | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||||    
T  1179231 aaaggcttaaatatgtattttatctttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatc 1179132  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||| ||| | |||||| |||||||    
T  1179131 atttaaaatttcatcctttaaccaacttaatca 1179099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 7451833 - 7451949
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| |||| ||  |||||   ||   ||||||||     
T  7451833 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttacccctgcattgtttaatcat 7451932  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  7451933 ttaaaatttcgtccctc 7451949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 10781913 - 10781797
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||| |||||||| || | |||||| |||  |||   |||||||     
T  10781913 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 10781814  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  10781813 ttaaaatttcgtccctc 10781797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 34765809 - 34765693
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||||||||||| | |||||| |||||||||||||||||||   ||||||||||||| |||| ||  |||| |  ||   ||||||||     
T  34765809 aggcttaaatatgtattttatccttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacctttgcattgtttaatcat 34765710  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  34765709 ttaaaatttcgtccctc 34765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 40388536 - 40388420
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| ||| |||||| |||||||||| | |||||||||||||| || ||||||||||| |||| ||| | |||   ||||| |||||||    
T  40388536 aaggctttaatatgtgtttcatccctgcaattaagggccatttaaaaattggtccctctaatcgctaatcctggcaaattgccccaacaaaagttaatca 40388437  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  40388436 tttaaaatttcgtccct 40388420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 44967467 - 44967351
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | ||||||  ||||||||||||||||||| |||||||||||||| |||| ||  |||||   ||   ||||||||     
T  44967467 aggcttaaatatgtatttgatccttgcaattagaggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccctgcattgtttaatcat 44967368  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  44967367 ttaaaatttcgtccctc 44967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 49879208 - 49879336
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||| |||||| || | |||||| |||  |||   ||||||| ||    
T  49879208 gcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaattgctaatccttgcaaactagccttgcaatcattaatcattt 49879307  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| |  ||||| |||||||    
T  49879308 aaaatttcgtcctttgaccaatttaatca 49879336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 278
Target Start/End: Complemental strand, 11448161 - 11448046
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    |||||||||||||||||||||  |||||  ||||| ||||||||||||||||| || |||||||||||||| || | ||| ||||||  ||   ||||||    
T  11448161 taaaggcttaaatatgtatttcgtccctgtaattaggggtcgtttaaaaattgatctctgtaatcgctaatccttgcaaattacccttgcattgtttaat 11448062  T
Q  263 cacttaaaatttcgtc 278  Q
    || |||||||||||||    
T  11448061 catttaaaatttcgtc 11448046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 147319 - 147385
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  147319 ggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattggtccctgtattcgctaat 147385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 161 - 279
Target Start/End: Complemental strand, 24350866 - 24350748
Alignment:
Q  161 aataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattta 260  Q
    ||||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||| | |||||||| || | |||||| | |  |||   |||    
T  24350866 aataaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgcattcgctaatccttgcaaactagctttgcaatcatta 24350767  T
Q  261 atcacttaaaatttcgtcc 279  Q
    |||| ||||||||||||||    
T  24350766 atcatttaaaatttcgtcc 24350748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 274
Target Start/End: Original strand, 43155526 - 43155636
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||    
T  43155526 aaaggattaaatatgtatttgatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcgttaatc 43155625  T
Q  264 acttaaaattt 274  Q
    | |||||||||    
T  43155626 atttaaaattt 43155636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 7452231 - 7452102
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| |    
T  7452231 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 7452132  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||| |||| |  ||||| |||||||    
T  7452131 taaaatttagtcctttgaccaacttaatca 7452102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 23613307 - 23613424
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||||||||||  ||| ||  |||||   ||   ||||||||    
T  23613307 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccctgcattgtttaatca 23613406  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  23613407 tttaaaatttcgtccctc 23613424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 37248238 - 37248347
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| | || | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||    
T  37248238 cttaaatatgtatttgaaccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcattta 37248337  T
Q  269 aaatttcgtc 278  Q
    ||||||||||    
T  37248338 aaatttcgtc 37248347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 13058413 - 13058281
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||| | |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||    
T  13058413 aaaggcttaaatatgtatttgatccttgcaataaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatc 13058314  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | ||||||||| |||| |  ||||| |||||||    
T  13058313 atttaaaatttagtcctttgaccaacttaatca 13058281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 43155925 - 43155809
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||||||| |||| |||| ||  || ||   ||  |||||||||     
T  43155925 aggcttaaatatgtatttgatccttataattaggggtcgtttaaaaattggtccctgtaatcgttaatcctggcaatttatccctgcattatttaatcat 43155826  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  43155825 ttaaaatttcgtccctc 43155809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 164 - 296
Target Start/End: Complemental strand, 46661345 - 46661213
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |  ||||| || | |||||| |||  |||   ||||||    
T  46661345 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtatttactaatcctcgcaaactagccttgcaatcattaatc 46661246  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  46661245 atttaaaatttcgtcctttgaccaacttaatca 46661213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 51692552 - 51692668
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | ||||||  |||||||||||||||| ||  ||||||||||||| |||  ||  ||||||  ||   |||||||||    
T  51692552 aggcttaaatatgtatttcatccttgcaattagaggtcgtttaaaaattgatctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcac 51692651  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  51692652 ttaaaatttcgtccctc 51692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 55866111 - 55866236
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||  ||||| |||||| |||||||||||||||||||   |||| || ||||| || | ||| |||||||||||| | |||||| |    
T  55866111 ggcttaaatatgtatttcgtccctgcaattaggggtcgtttaaaaattggt--ttgtattcactaatccttgcaaattaccctctcaaagtataatcatt 55866208  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    ||||| || |||||| |||| |||||||    
T  55866209 taaaaattggtccctgaacccagttaat 55866236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 24411777 - 24411710
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||||| || ||||| ||||||||    
T  24411777 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattgatccctgtattcgctaat 24411710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 37248630 - 37248567
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  37248630 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 37248567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 52909254 - 52909365
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||  | |||||| |||||||| |||||||||||||||||||||||||| |||  ||  ||||||  ||   |||||||| ||    
T  52909254 gcttaaatatgtatttcatctttgcaattaggggtcgttcaaaaattggtcactgtaatcgctaatcctgacaatttacccttgcattgtttaatcattt 52909353  T
Q  268 aaaatttcgtcc 279  Q
    ||||||||||||    
T  52909354 aaaatttcgtcc 52909365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 18831745 - 18831679
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  18831745 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaat 18831679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 29321334 - 29321204
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||| | |||||||||||| |||||||||||||  || |||||| ||||||||| ||| |||| | ||||| ||||||||     
T  29321334 aggctttaatatgtgtttcgtccttgcaattaagggtcatttaaaaattggtttctataatcgttaattctggcaaattaccttttcaaattttaatcat 29321235  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||| | || || |||||||| |||||||||    
T  29321234 ttaagaattggttcctcaacctagttaatca 29321204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 41582446 - 41582576
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| ||| |||||| |||| | ||||| |||||||||||||| || |||||| |||| |||| ||| | |||   ||||| |||||||     
T  41582446 aggctttaatatgtgtttcatccctgcaatcaggggtcatttaaaaattggtccctctaatcgttaatcctggcaaattgcccctgcaaaagttaatcat 41582545  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||| |  |||||||||    
T  41582546 ttaaaatttcgtccctcatcacagttaatca 41582576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 148184 - 148071
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||| || || ||| |||| || | ||||||  ||  |||   |||||||     
T  148184 aggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctttattcgttaatccttgcaaactagtcttgcaatcattaatcat 148085  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  148084 ttaaaatttcgtcc 148071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 238
Target Start/End: Original strand, 5368945 - 5369018
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    ||||||||||||||||||| |||| | |||||| || |||||||||||||||||  ||||||||||||| ||||    
T  5368945 aaggcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaatcctgg 5369018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 14801734 - 14801851
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| | ||||||||||||||||||  ||||||||||||| |||  ||  ||||||   |   ||||||||    
T  14801734 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatca 14801833  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  14801834 tttaaaatttcgtccctc 14801851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 15507674 - 15507739
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||| || || ||||||||    
T  15507674 gcttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattggtccctatattcgctaat 15507739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 40387465 - 40387582
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| ||| |||||| |||||| ||| | |||||||||||||| ||||| |||||||| |||| ||| | |||   ||||| |||||||    
T  40387465 aaggctttaatatgtgtttcatccctgcaattaggggccatttaaaaattggtccctgtattcgctaatcctggcaaattgcccctgcaaaagttaatca 40387564  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||| ||||    
T  40387565 tttaaaatttcgttcctc 40387582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 48528477 - 48528542
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgta 224  Q
    |||| |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||    
T  48528477 aaaaaaaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgta 48528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 17356348 - 17356284
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  17356348 cttaaatatgtatttcatccttccaattacgggtcgtttaaaaattggtccctgtattcgctaat 17356284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 278
Target Start/End: Complemental strand, 24711509 - 24711397
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  ||| |||| |||| || | |||||| |||  |||   |||||||     
T  24711509 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgtcatcgttaatccttgcaaactagccttgcaatcattaatcat 24711410  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  24711409 ttaaaatttcgtc 24711397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 35028001 - 35028109
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||  ||||| |||||||| || | |||||| |||  |||   ||||||| ||||    
T  35028001 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 35028100  T
Q  270 aatttcgtc 278  Q
    |||||||||    
T  35028101 aatttcgtc 35028109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 41583660 - 41583544
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| ||| |||||| |||||| ||||| ||||||||||| |  ||||| |||||||| |||| ||| | |||   ||||| |||||||     
T  41583660 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattgatttctgtattcgctaatcctggcaaattgcccctgcaaaagttaatcat 41583561  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  41583560 ttaaaatttcgtccctc 41583544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 44967071 - 44967135
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  44967071 cttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaat 44967135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 37976582 - 37976511
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctg 237  Q
    |||||||||||||||||| |||    |||||| ||||||||||||||||| || ||||||||||||||||||    
T  37976582 aggcttaaatatgtatttcatcatggcaattaggggtcgtttaaaaattgatccctgtaatcgctaattctg 37976511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 54086698 - 54086761
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| ||||||||    
T  54086698 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaat 54086761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 10780711 - 10780821
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  || | |||||||| || | |||||| |||  |||   |||||||    
T  10780711 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatca 10780810  T
Q  265 cttaaaatttc 275  Q
     ||||||||||    
T  10780811 tttaaaatttc 10780821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 10974320 - 10974430
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||  || | |||||||| || | |||||| |||  |||   |||||||    
T  10974320 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccatgcattcgctaatccttgcaaactagccttgcaatcattaatca 10974419  T
Q  265 cttaaaatttc 275  Q
     ||||||||||    
T  10974420 tttaaaatttc 10974430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 23613706 - 23613640
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||| || ||||| ||||||||    
T  23613706 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattgatccctgtattcgctaat 23613640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 274
Target Start/End: Original strand, 10203647 - 10203728
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaattt 274  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||  ||| || |||   |||||||||||| |||||||||    
T  10203647 aattaagggtcatttaaaaattagtcactgtaatcgttaattctgacaaattatccttataaaatttaatcatttaaaattt 10203728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 36009243 - 36009126
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaaggg-tcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    |||||||||||||||||| |||| |  ||||| ||| ||||||||||||||||| ||||||||| |||| |||| ||  |||||   ||   ||||||||    
T  36009243 aggcttaaatatgtatttgatccttgtaattagggggtcgtttaaaaattggtccctgtaatcgttaatcctggaaatttacccctgcattgtttaatca 36009144  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  36009143 tttaaaatttcgtccctc 36009126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 278
Target Start/End: Complemental strand, 39667176 - 39667091
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtc 278  Q
    ||||| ||||| |||||||||||||| ||||||||| |||| |||||||| ||||||  ||   |||||||| |||||||||||||    
T  39667176 aattacgggtcatttaaaaattggtccctgtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtc 39667091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 16006219 - 16006155
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| || | | |||||| |||||||||||||||||||| ||||| ||||||||    
T  16006219 cttaaatatgtatttgattcttgcaattaggggtcgtttaaaaattggtctctgtattcgctaat 16006155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 17355923 - 17355991
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | |||||| | |||||||||||||||||  ||||| ||||||||    
T  17355923 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggttgctgtattcgctaat 17355991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 24411360 - 24411423
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaa 232  Q
    ||||||||||||||| ||||   |||||| |||| ||||||||||||||| |||||||||||||    
T  24411360 cttaaatatgtatttcatcctagcaattaggggtagtttaaaaattggtccctgtaatcgctaa 24411423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 36008843 - 36008910
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| |  ||||| || ||||||||||||||||| ||||| ||||||||    
T  36008843 aggcttaaatatgtatttgatccttgtaattagggatcgtttaaaaattggtccctgtattcgctaat 36008910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 175 - 282
Target Start/End: Complemental strand, 49879596 - 49879489
Alignment:
Q  175 tatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaattt 274  Q
    ||||||||| |||| | |||||| |||||||||||||| || || |||||||||||||| |||  ||  ||||||  ||   |||||||| |||||||||    
T  49879596 tatgtatttgatccttgcaattaggggtcgtttaaaaactgatctctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 49879497  T
Q  275 cgtccctc 282  Q
    ||||||||    
T  49879496 cgtccctc 49879489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 16005843 - 16005909
Alignment:
Q  172 aaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||||| |||| |  ||||| ||||||||||||||||  || |||||||||||||||||||    
T  16005843 aaatatgtatttgatccttataattaggggtcgtttaaaaattaatccctgtaatcgctaattctgg 16005909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 35508669 - 35508599
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattct 236  Q
    ||||||||||||||||||||||  | |||||| ||||||||||||||||  ||  |||||||| |||||||    
T  35508669 aggcttaaatatgtattttatcattgcaattaggggtcgtttaaaaattaatccttgtaatcgttaattct 35508599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 52909682 - 52909552
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| || || ||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||| |     
T  52909682 aggcttaaatatgtatttcatccttgcaattatggatcatttaaaaattggtctatgtattcgctaatccttgcaaactagccttgcaatcattaattat 52909583  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  52909582 ttaaaatttcgtcctttgaccaacttaatca 52909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 282
Target Start/End: Complemental strand, 53129937 - 53129819
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||| | ||||||||||||||||| ||   |||||||||||| || | ||  ||||||| ||   ||| |||    
T  53129937 aaaggcttaaatatgtatttcatccttgcaatcaggggtcgtttaaaaattgatcctcgtaatcgctaatccttgcaatttaccctcgcattgtttcatc 53129838  T
Q  264 acttaaaatttcgtccctc 282  Q
      |||||||||||||||||    
T  53129837 gtttaaaatttcgtccctc 53129819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 1178054 - 1178122
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||| |  |||||  |||||||||||||||||||| |||| ||||||||    
T  1178054 aaaggcttaaatatgtatttcatccttgtaattagaggtcgtttaaaaattggtca-tgtattcgctaat 1178122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 281
Target Start/End: Original strand, 8438306 - 8438394
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||||| ||||| ||||||||||||||| |||||||| |||| |||| ||| ||| ||  ||||  ||||||| ||||||||||||||||    
T  8438306 caattaggggtcatttaaaaattggtca-tgtaatcgttaatcctggcaaattactcttgcaaaccttaatcatttaaaatttcgtccct 8438394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 14802163 - 14802034
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||| ||||| |||| | ||||||  | |||||||||||||||||  |||| ||||||||||| | ||||||  ||  |||   ||||||| |    
T  14802163 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 14802064  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  14802063 taaaatttcgtcctttgaccaacttaatca 14802034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 281
Target Start/End: Complemental strand, 8439626 - 8439538
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||||||||| |||||||||||| ||| |||||||| |||| || | ||| || |||  ||||  ||||||| ||||||||||||||||    
T  8439626 aattaagggttgtttaaaaattgatcattgtaatcgttaatcctagcaaattatccttgcaaacattaatcatttaaaatttcgtccct 8439538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 15508098 - 15508035
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||| |||  |||||||||||||    
T  15508098 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatt-gtccttgtaatcgctaat 15508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 30642576 - 30642460
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||| ||||||| |||  ||||| |||||| ||||| ||||||||||  ||| |||||||| |||| || | ||| ||  ||  |||| ||||||||    
T  30642576 aaggctttaatatgtgtttcgtccctgcaattatgggtcatttaaaaattcatcattgtaatcgttaatcctagcaaattagtcttgcaaagtttaatca 30642477  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  30642476 tttaaaatttcgtccct 30642460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 40317053 - 40316977
Alignment:
Q  205 tttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||||||||||| | ||||||||| |||| |||| ||| |||||| ||||| |||||||  |||||||| |||||||    
T  40317053 tttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattccgtccct 40316977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 40327127 - 40327051
Alignment:
Q  205 tttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    |||||||||||| | ||||||||| |||| |||| ||| |||||| ||||| |||||||  |||||||| |||||||    
T  40327127 tttaaaaattggcctctgtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattccgtccct 40327051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Original strand, 50750878 - 50750958
Alignment:
Q  158 taaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    ||||||||||| ||||  |||| ||| | |||| |||||| | |||||||||||||| ||| |||||||||||||| ||||    
T  50750878 taaaataaaggtttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctgg 50750958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 53701814 - 53701878
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||| ||||| |||| | |||||| ||||||||||||||||| || |||||||| |||||    
T  53701814 cttaaatatctatttcatccttgcaattaggggtcgtttaaaaattgatctctgtaatctctaat 53701878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 54087121 - 54087057
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||  |  ||||| |||||||||||||||||||| ||||||||| ||||    
T  54087121 cttaaatatgtatttcatcattgtaattaggggtcgtttaaaaattggtccctgtaatcgttaat 54087057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 30641520 - 30641632
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||| ||||||| |||  ||||| |||||| ||||| |||||||||| |||  |||||||| |||| || | ||| |||| |  |||| |||||||| |    
T  30641520 ggctttaatatgtgtttcgtccctccaattaggggtcatttaaaaatttgtc--tgtaatcgttaatccttgcaaattaccattacaaagtttaatcatt 30641617  T
Q  267 taaaatttcgtccct 281  Q
    |||||||||||||||    
T  30641618 taaaatttcgtccct 30641632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 281
Target Start/End: Original strand, 11446267 - 11446384
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||| | ||||||| |||  ||||| ||||||  |||| |||||||||||||   || ||||| |||| |||| ||| ||||||  |||| |||||||    
T  11446267 aaaggcattaatatgtgtttcgtccctgcaattagaggtcatttaaaaattggttcatggaatcgttaatcctggcaaattacccttgcaaagtttaatc 11446366  T
Q  264 acttaaaatttcgtccct 281  Q
      ||||||||||||||||    
T  11446367 ttttaaaatttcgtccct 11446384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 35028428 - 35028375
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||||| |||| | |||||| ||||  ||||||||||||||    
T  35028428 aaggcttaaatatgtatttcatccttgcaattaggggtattttaaaaattggtc 35028375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 5369295 - 5369183
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| |  || || |||||||||||||||||||| ||| | ||| |||| || | |||||| |||  |||   ||||||| |    
T  5369295 ggcttaaatatgtatttgatccttataagtaggggtcgtttaaaaattggtccctgcattcgttaatccttgcaaactagccttgcaatcattaatcatt 5369196  T
Q  267 taaaatttcgtcc 279  Q
    |||||||| ||||    
T  5369195 taaaatttagtcc 5369183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 296
Target Start/End: Complemental strand, 10408290 - 10408186
Alignment:
Q  192 caattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagtt 291  Q
    |||||| | ||| |||||||||| ||| |||||||||||||| |||| ||  ||||||  ||   |||||||| |||||||||||||| |  ||||| ||    
T  10408290 caattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 10408191  T
Q  292 aatca 296  Q
    |||||    
T  10408190 aatca 10408186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 53129503 - 53129551
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaa 212  Q
    ||||||||||||||||||||||||  | |||||| || |||||||||||    
T  53129503 aaaggcttaaatatgtattttatcattgcaattagggatcgtttaaaaa 53129551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 53702229 - 53702158
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattct 236  Q
    |||||||||||||||||||| |||  | ||||||  ||| |||||||||||||||| |||| ||| |||||||    
T  53702229 aaaggcttaaatatgtatttcatctttgcaattagaggttgtttaaaaattggtca-tgtattcgttaattct 53702158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 8e-24; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 281
Target Start/End: Complemental strand, 20386860 - 20386744
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||| |||   |||||||    
T  20386860 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagcctcgcaattattaatca 20386761  T
Q  265 cttaaaatttcgtccct 281  Q
     ||||||||||||||||    
T  20386760 tttaaaatttcgtccct 20386744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 23663943 - 23663827
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   ||||||||     
T  23663943 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 23663844  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  23663843 ttaaaatttcgtccctc 23663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 2535978 - 2535864
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||| |||||||||||  ||||| |||||| ||||| |||||||||||||| ||||||||| |||| |||| ||| ||||||  |||| |||||||| |    
T  2535978 ggctttaatatgtatttcgtccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattacccttacaaagtttaatcatt 2535879  T
Q  267 taaaatttcgtccct 281  Q
    |||||||||||||||    
T  2535878 taaaatttcgtccct 2535864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 23698673 - 23698557
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| |  ||||| |||||||||||||||||||| |||||||||||||| |||| ||  ||||||  ||   ||||||||     
T  23698673 aggcttaaatatgtatttgatccttgtaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 23698574  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  23698573 ttaaaatttcgtccctc 23698557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 39071676 - 39071791
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| |||  ||  ||||||  ||   |||||||| |    
T  39071676 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 39071775  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  39071776 taaaatttcgtccctc 39071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 279
Target Start/End: Complemental strand, 8317017 - 8316904
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  ||||||||||||| |||| ||  ||||||  ||   ||||||||     
T  8317017 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccttgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 8316918  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  8316917 ttaaaatttcgtcc 8316904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 38956100 - 38955988
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || |||||||| |||  |||   ||||||| |    
T  38956100 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgtaaactagccttgcaatcattaatcatt 38956001  T
Q  267 taaaatttcgtcc 279  Q
    |||||||| ||||    
T  38956000 taaaatttagtcc 38955988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 296
Target Start/End: Original strand, 12272920 - 12273047
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| || ||||||||||||||||| |||||||||||||| || | |||||| |||  |||   ||||||| |||    
T  12272920 cttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtctctgtaatcgctaatccttgcaaactagccttgcaattattaatcattta 12273019  T
Q  269 aaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||| |  ||||| |||||||    
T  12273020 aaatttcgtcctttgaccaatttaatca 12273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 20385568 - 20385695
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | ||||||  ||  |||   ||||||| |    
T  20385568 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagtcttgcaatcattaatcatt 20385667  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    ||||||||||||||| | || |||||||    
T  20385668 taaaatttcgtccctgagcccagttaat 20385695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 296
Target Start/End: Complemental strand, 38862993 - 38862862
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    |||| |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   |||||||    
T  38862993 aaggtttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtctctgtattcgctaatccttgcaaactagccttgcaatcattaatca 38862894  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     |||||||||||||| |  ||||| |||||||    
T  38862893 tttaaaatttcgtcctttgaccaacttaatca 38862862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 12198949 - 12199079
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| || ||||||||||| || | ||||||  ||  |||   |||||||     
T  12198949 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcat 12199048  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  12199049 ttaaaatttcgtcctttgaccaatttaatca 12199079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 12443377 - 12443507
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| || ||||||||||| || | ||||||  ||  |||   |||||||     
T  12443377 aggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatccttgcaaactagtcttgcaatcattaatcat 12443476  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  12443477 ttaaaatttcgtcctttgaccaatttaatca 12443507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 23698308 - 23698438
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaaggg-tcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||||||| |||| | |||||| ||| ||||||||||||| ||| ||||||||||||||||| | |||||| |||  |||   |||||||     
T  23698308 ggcttaaatatgtatttgatccttgcaattagggggtcgtttaaaaattagtccctgtaatcgctaattcttgcaaactagccttgcaatcattaatcag 23698407  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  23698408 ttaaaatttcgtcctttgaccaatttaatca 23698438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 36928479 - 36928591
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||   || |||||||||||||||||||||||||||||  ||||||||||||| |||  ||  ||||||  ||   |||||||| |    
T  36928479 ggcttaaatatgtattt---cctttcaattaagggtcgtttaaaaattggtctatgtaatcgctaatcctgacaatttacccttgcattgtttaatcatt 36928575  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  36928576 taaaatttcgtccctc 36928591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 282
Target Start/End: Complemental strand, 4995093 - 4994970
Alignment:
Q  158 taaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaat 257  Q
    |||| ||||||||||||||||||||| |||| | |||||| ||||| |||||||||||||| |||||||||||||| |||  ||  ||||||  ||   |    
T  4995093 taaactaaaggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtc-ctgtaatcgctaatcctgacaatttacccttgcattgt 4994995  T
Q  258 ttaatcacttaaaatttcgtccctc 282  Q
    ||||||| || ||||||||||||||    
T  4994994 ttaatcatttcaaatttcgtccctc 4994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 279
Target Start/End: Complemental strand, 40318400 - 40318280
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| |||||||||||||||||||| |||| | |||||| |||| ||||||||||| |||  ||||||||||||| |||| ||  ||||||  ||   ||    
T  40318400 aaaaaaaaggcttaaatatgtatttcatccttgcaattaggggttgtttaaaaattagtccatgtaatcgctaatcctggcaatttacccttgcattgtt 40318301  T
Q  259 taatcacttaaaatttcgtcc 279  Q
    |||||| ||||||||||||||    
T  40318300 taatcatttaaaatttcgtcc 40318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 38955703 - 38955818
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||  || |||||||||||||||||| ||||||||||||| |||||||  |||||   ||   |||||||| |    
T  38955703 ggcttaaatatgtatttgatccttgcaattggggatcgtttaaaaattggtcattgtaatcgctaatcctggtaatttacccctgcattgtttaatcatt 38955802  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||| ||||||    
T  38955803 taaaatttcatccctc 38955818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 281
Target Start/End: Original strand, 2534695 - 2534809
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||   |||| |||||| |||||||||||||||||||   ||||||||||||| || | ||||||| ||  ||   |||||||| |    
T  2534695 ggcttaaatatgtatttcgaccctgcaattatgggtcgtttaaaaattggtacatgtaatcgctaatccttgcaaactactcttgcattgtttaatcatt 2534794  T
Q  267 taaaatttcgtccct 281  Q
    |||||||||||||||    
T  2534795 taaaatttcgtccct 2534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 34060488 - 34060618
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||||  ||||||||||||||||||  ||||||||||||| || | ||| |  | |  ||   ||||||||     
T  34060488 aggcttaaatatgtatttcatccttgcaattaaacgtcgtttaaaaattggtccatgtaatcgctaatccttgcaaattgtcgttgcattctttaatcat 34060587  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||| ||| ||||||||||||||||||||    
T  34060588 ttaaaacttcatccctcaaccaagttaatca 34060618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 39072070 - 39071941
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||| |||||||||||||||||||||| ||||| ||| |||| || | |||||| |||  |||   |||||||     
T  39072070 aggcttaaatatgtatttcatccttgcaatcaagggtcgtttaaaaattggtccctgtattcg-taatccttgcaaactagccttgcaatcattaatcat 39071972  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  39071971 ttaaaatttcgtcctttgaccaacttaatca 39071941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 296
Target Start/End: Original strand, 8316650 - 8316782
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||||||||||||| |||| |||| | |||||| ||||||||||||||||||||  |||| ||| |||| || | |||||| |||  |||   ||||||    
T  8316650 aaaggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccatgtattcgttaatccttgcaaactagccttgcaatcattaatc 8316749  T
Q  264 acttaaaatttcgtccctcaaccaagttaatca 296  Q
    | |||||||||||||| |  ||||| |||||||    
T  8316750 atttaaaatttcgtcctttgaccaacttaatca 8316782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 12273278 - 12273166
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| | |  ||  ||||||  ||   |||||||| ||||    
T  12273278 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaa 12273179  T
Q  270 aatttcgtccctc 282  Q
    |||||||||||||    
T  12273178 aatttcgtccctc 12273166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 281
Target Start/End: Complemental strand, 34177396 - 34177284
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||  |  ||||| ||||||||||||||||||||  |||| |||||||| || |||||||| |||  ||   |||||||| |||    
T  34177396 cttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccttgtattcgctaatccttgtaaactagccttgcattctttaatcattta 34177297  T
Q  269 aaatttcgtccct 281  Q
    |||||||||||||    
T  34177296 aaatttcgtccct 34177284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 7306397 - 7306468
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattct 236  Q
    ||||||||||||||||||| |||||| ||| || ||||||||||||||||||||  || |||| ||||||||    
T  7306397 aaggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtccttgcaatcactaattct 7306468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 16388954 - 16388839
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||||||||||   |||||| |||||| |||| ||  ||||||  ||   |||||||| |    
T  16388954 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggttcatgtaattgctaatcctggcaatttacccttgcattgtttaatcatt 16388855  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  16388854 taaaatttcgtccctc 16388839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 31608941 - 31608826
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||| |||||| |||| | |||||||||||||||||||||||||||  |||| |||||||| || | ||  ||||||  ||   | |||||| |    
T  31608941 ggcttaaataagtatttcatccttgcaattaagggtcgtttaaaaattggtccatgtattcgctaatccttgcaatttacccttgcattgtctaatcatt 31608842  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  31608841 taaaatttcgtccctc 31608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 34685685 - 34685575
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    |||||||||||||||||||||| | |||||| || |||||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||||| |    
T  34685685 ggcttaaatatgtattttatccttgcaattagggatcgtttaaaaattggtc-ttgtattcgctaatccttgcaaactagccttacaatcattaatcatt 34685587  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  34685586 taaaatttcgtc 34685575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 1425056 - 1425182
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| || ||||| || | |||||| |||  |||   ||||||| ||||    
T  1425056 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtattcactaatccttgcaaactagccttgcaatcattaatcatttaa 1425155  T
Q  270 aatttcgtccctcaaccaagttaatca 296  Q
    ||||| |||| |  ||||| |||||||    
T  1425156 aatttagtcctttgaccaacttaatca 1425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 278
Target Start/End: Original strand, 13186057 - 13186171
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| || ||||||||||||||||   ||||||||||||| |||  ||  ||||||  ||   |||||||    
T  13186057 aaaggcttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggttcatgtaatcgctaatcctgacaatttacccttgcattgtttaatc 13186156  T
Q  264 acttaaaatttcgtc 278  Q
    | |||||||||||||    
T  13186157 atttaaaatttcgtc 13186171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 13186488 - 13186358
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||| ||||| |||| | |||||| |||||||||||||||||||   |||| |||||||| || | |||||| |||  |||   |||||||     
T  13186488 aggcttaaatatatatttcatccttgcaattaggggtcgtttaaaaattggttcatgtattcgctaatccttgcaaactagccttgcaatcattaatcat 13186389  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||  |  |||||||||||||    
T  13186388 ttaaaatttcgtcatttgaccaagttaatca 13186358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 23663544 - 23663674
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    ||||||||||||| |||| |||| | |||||| |||||||||||||||||||| ||||| ||| |||| || | |||||| |||   ||   |||||||     
T  23663544 aggcttaaatatgcatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgttaatccttggaaactaaccttgaaatcattaatcat 23663643  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  23663644 ttaaaatttcgtcctttgaccaacttaatca 23663674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 30712143 - 30712018
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | | |||| ||| |||||||||||||||| ||||| | |||||| || | |||||| |||  |||   ||||||| ||    
T  30712143 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30712045  T
Q  268 aaaatttcgtccctcaaccaagttaat 294  Q
    |||||||||||||| |||| |||||||    
T  30712044 aaaatttcgtccctgaacccagttaat 30712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 294
Target Start/End: Complemental strand, 30719920 - 30719795
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | | |||| ||| |||||||||||||||| ||||| | |||||| || | |||||| |||  |||   ||||||| ||    
T  30719920 gcttaaatatgtatttgatccttgcgattaggggccgtttaaaaattggtc-ctgtatttgctaatccttgcaaactagccttgcaatcattaatcattt 30719822  T
Q  268 aaaatttcgtccctcaaccaagttaat 294  Q
    |||||||||||||| |||| |||||||    
T  30719821 aaaatttcgtccctgaacccagttaat 30719795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 22915788 - 22915671
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | ||| || || |||||||||||||||||  |||||||||||||  ||| ||  ||||||  ||   ||||||||    
T  22915788 aaggcttaaatatgtatttgatccttgcaactagggatcgtttaaaaattggtccatgtaatcgctaatcttggcaatttacccttgcattgtttaatca 22915689  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||| ||||||||    
T  22915688 tttaaaattccgtccctc 22915671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 278
Target Start/End: Original strand, 40317966 - 40318075
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactta 268  Q
    ||||||||||||||| |||| | |||||| |||||||||||||||| ||| ||||| |||||||| || | |||||| |||  |||   ||||||| |||    
T  40317966 cttaaatatgtatttcatccttgcaattaggggtcgtttaaaaatttgtctctgtattcgctaatccttgcaaactagccttgcaatcattaatcattta 40318065  T
Q  269 aaatttcgtc 278  Q
    ||||| ||||    
T  40318066 aaattgcgtc 40318075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 7313434 - 7313382
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    |||||||||||||||||| |||||| ||| || ||||||||||||||||||||    
T  7313434 aggcttaaatatgtatttgatccctgcaaataggggtcgtttaaaaattggtc 7313382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 296
Target Start/End: Original strand, 9337059 - 9337155
Alignment:
Q  200 ggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||| ||| ||||||||||  |||||||| ||||| ||| ||| |||||| ||||| |||||||| |||| | || ||||||||||| |||||||||    
T  9337059 ggtcattttaaaattggtccttgtaatcgttaattttggcaaattaccctttcaaagtttaatcatttaagaattggtccctcaacctagttaatca 9337155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 7295352 - 7295289
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| | |||||| || |||||||||||| |||| ||||| ||||||||    
T  7295352 ttaaatatgtattttatccttgcaattatggatcgtttaaaaatcggtccctgtattcgctaat 7295289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 278
Target Start/End: Original strand, 8746324 - 8746435
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||| ||||| |||  ||||| |||||| ||||| ||||||||| |||||||||||||| ||||  ||  ||| ||||||  ||||  ||||||| |    
T  8746324 ggcttaagtatgtgtttcctccctgcaattaggggtcatttaaaaatcggtcactgtaatcgttaatcgtgacaaattacccttgcaaaccttaatcatt 8746423  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  8746424 taaaatttcgtc 8746435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 16388582 - 16388633
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggt 217  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||    
T  16388582 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggt 16388633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 33357497 - 33357564
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||| | |||||| ||||||||||||||||| ||  |||| ||||||||    
T  33357497 aggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattgatccatgtattcgctaat 33357564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 38862618 - 38862733
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||||||| ||||||||| ||  |   ||||||||||||| |||||||  |||| |  ||   |||||||| |    
T  38862618 ggcttaaatatgtatttcatccttgcaattaagggccgtttaaaatttttttcatgtaatcgctaatactggtaatttacctttgcattgtttaatcatt 38862717  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  38862718 taaaatttcgtccctc 38862733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 36186493 - 36186448
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaa 211  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||    
T  36186493 aggcttaaatatgtatttcatccttgcaattaagggtcgtttaaaa 36186448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 12199332 - 12199268
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| |  ||||| | ||||||||||||||||||  |||||||||||||    
T  12199332 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaat 12199268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 12443760 - 12443696
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||| |||| |  ||||| | ||||||||||||||||||  |||||||||||||    
T  12443760 cttaaatatgtatttgatccttataattaggagtcgtttaaaaattggtccttgtaatcgctaat 12443696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 20050115 - 20050198
Alignment:
Q  199 gggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctc 282  Q
    ||||| ||||||||||||||  |||| ||  ||||||||| |   | ||||  |||||||||||||||||||||||||||||||    
T  20050115 gggtcatttaaaaattggtccatgtattccttaattctggcattttgccctgccaaaatttaatcacttaaaatttcgtccctc 20050198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 5960046 - 5960112
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||| |||||||| |||| | |||||| || ||| |||||||||| || ||||||||||||||    
T  5960046 ggcttaaacatgtatttcatccttgcaattagggatcgattaaaaattgctccctgtaatcgctaat 5960112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 10749940 - 10749813
Alignment:
Q  163 taaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaat 262  Q
    ||||||||| ||||||| |||  ||| | |||||| || || ||||||||||||||  |||||||| |||| |||  ||| ||||||  ||||  |||||    
T  10749940 taaaggctttaatatgtgtttcgtccttgcaattagggatcatttaaaaattggtccatgtaatcgttaatcctgtcaaattacccttgcaaacgttaat 10749841  T
Q  263 cacttaaaatttcgtccctcaaccaagtta 292  Q
    ||||||||  || ||||||||||| |||||    
T  10749840 cacttaaa--ttggtccctcaacccagtta 10749813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 7983427 - 7983540
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||| ||||| |||  ||| | |||||| | ||| |||||||||| ||| |||||||||||||| |||| ||  ||||||  ||   ||||||||     
T  7983427 aggcttaattatgtgtttcgtccttgcaattaggcgtcatttaaaaattagtccctgtaatcgctaatcctggcaatttacccttgcattgtttaatcat 7983526  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  7983527 ttaaaatttcgtcc 7983540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 9065662 - 9065731
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||| ||||||||||||||| |||  |  ||||| |||||||||||||||||||| || |||||| ||||    
T  9065662 aaagacttaaatatgtatttcatctttgtaattaggggtcgtttaaaaattggtccctataatcgttaat 9065731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 11763103 - 11763038
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||| ||||||| |||  ||||| ||||||||| || ||||||||||||||  |||||||||||||    
T  11763103 gctttaatatgtgtttcgtccctgcaattaaggatcatttaaaaattggtccttgtaatcgctaat 11763038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 278
Target Start/End: Original strand, 4994656 - 4994768
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||  | |||||| || | |||||||||||| || ||||| |||||||| || | |||||| |||  |||   ||||| |     
T  4994656 aggcttaaatatgtatttcatcgttgcaattagggattgtttaaaaattgatctctgtattcgctaatccttggaaactagccttgcaatcattaattat 4994755  T
Q  266 ttaaaatttcgtc 278  Q
    |||||||||||||    
T  4994756 ttaaaatttcgtc 4994768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 296
Target Start/End: Original strand, 7294103 - 7294230
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||  | ||||||  |||||||||||||||| || || || |||||||| || |||||||| |||  ||   |||||||| ||    
T  7294103 gcttaaatatgtatttcatct-tgcaattagaggtcgtttaaaaattgatctctatattcgctaatccttgtaaactagccttgcattctttaatcattt 7294201  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||| ||| |  ||| |||||||||    
T  7294202 aaaatttcatcctttgacccagttaatca 7294230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 42803646 - 42803586
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatc 227  Q
    ||||||||||||||||| |||| | ||||||   |||||||||||||||||| || |||||    
T  42803646 ggcttaaatatgtatttcatccttgcaattagaagtcgtttaaaaattggtccctataatc 42803586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 1e-22; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 282
Target Start/End: Original strand, 2796172 - 2796294
Alignment:
Q  160 aaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattt 259  Q
    ||||| |||||||||||||||||| |||| | |||||| ||||| |||||||||||||| |||||||||||||| |||| ||  ||||||  ||   |||    
T  2796172 aaatataggcttaaatatgtatttgatccttgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcctggcaatttacccttgcattgttt 2796271  T
Q  260 aatcacttaaaatttcgtccctc 282  Q
    ||||| |||||||||||||||||    
T  2796272 aatcatttaaaatttcgtccctc 2796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 9367740 - 9367870
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||| ||||| ||||| |||||||| || | |||||| |||  |||   |||||||     
T  9367740 aggcttaaatatgtatttaatccctacaattaggggtcgtttaaaaaatggtctctgtattcgctaatccttgcaaactagccttgcaattattaatcat 9367839  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||||||| || | |||||||    
T  9367840 ttaaaatttcgtccctcatcccaattaatca 9367870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 23458408 - 23458292
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| || | ||  ||||||  ||   ||||||||     
T  23458408 aggcttaaatatgtatttcatccttgcaattatgggtcgtttaaaaattggtctctgtaatcgctaatccttgcaatttacccttgcattgtttaatcat 23458309  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  23458308 ttaaaatttcgtccctc 23458292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 167 - 282
Target Start/End: Complemental strand, 9294386 - 9294271
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| || ||||||||||| |||| ||  ||||||  ||   |||||||| |    
T  9294386 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctataatcgctaatcctggcaatttacccttgcattgtttaatcatt 9294287  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  9294286 taaaatttcgtccctc 9294271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 296
Target Start/End: Original strand, 25107205 - 25107342
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| |||||||||| ||||| ||| |||||| |||||| ||||| |||||||||||||| || ||||||||||| |||| ||| | |||   ||||  |    
T  25107205 aaaaaaaaggcttaagtatgtgtttcatccctgcaattaggggtcatttaaaaattggtctctctaatcgctaatcctggcaaattgcccctgcaaatgt 25107304  T
Q  259 taatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||| |||||||||||||||||| |  |||||||||    
T  25107305 taatcatttaaaatttcgtccctcatcacagttaatca 25107342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 19741322 - 19741254
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||||||||    
T  19741322 aaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaat 19741254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 23457988 - 23458108
Alignment:
Q  176 atgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttc 275  Q
    |||||||| |||| | ||||||||||||||||||||||||||| ||||| |||||||| || | |||||| |||  ||| | ||||||| ||||||||||    
T  23457988 atgtatttcatccttgcaattaagggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaataattaatcatttaaaatttc 23458087  T
Q  276 gtccctcaaccaagttaatca 296  Q
    |||| |  ||||| |||||||    
T  23458088 gtcctttgaccaacttaatca 23458108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Complemental strand, 33689808 - 33689692
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||  | |||||| |||||||||||||||||||   ||||||||||||| |||| ||  ||||||  ||  |||||||||     
T  33689808 aggcttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggttcatgtaatcgctaatcctggcaatttacccttgcattatttaatcat 33689709  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  33689708 ttaaaatttcgtccctc 33689692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 296
Target Start/End: Complemental strand, 23276421 - 23276282
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    |||||| ||| |||| ||||||| ||| |||||| |||||| ||||| |||||||||||||| |||||||||||||| | || ||| |||||   ||||     
T  23276421 ataaaaaaaaagctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgctaatcccggcaaattacccctacaaac 23276322  T
Q  257 tttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
     ||||||| ||||||||| |||||||| |  |||||||||    
T  23276321 gttaatcatttaaaattttgtccctcatcacagttaatca 23276282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 296
Target Start/End: Original strand, 33689380 - 33689510
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||||||||| |||| ||||||||||| | |||||| |||  |||   |||||||    
T  33689380 aaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtca-tgtattcgctaattcttgcaaactagccttgcaatcattaatca 33689478  T
Q  265 cttaaaatttcgtccctcaaccaagttaatca 296  Q
     ||||||||| |||| |  ||||| |||||||    
T  33689479 tttaaaattttgtcctttgaccaacttaatca 33689510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 1079650 - 1079536
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| ||| |||||| |||||| ||||| |||||||||||||| ||||||||| |||| |||| ||| || |||  |||| |||||||      
T  1079650 aggctttaatatgtgtttcatccctgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctggcaaattagccttgcaaagtttaatctt 1079551  T
Q  266 ttaaaatttcgtccc 280  Q
    |||||||||||||||    
T  1079550 ttaaaatttcgtccc 1079536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 19740922 - 19741052
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| || | | |||||| || ||||||||||||||||| |||||||||||||| || | |||||| |||  |||   |||||||     
T  19740922 aggcttaaatatgtatttgattcatgcaattagggatcgtttaaaaattggtccctgtaatcgctaatccttgcaaactagccttgcaatcattaatcat 19741021  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  19741022 ttaaaatttcgtcctttgaccaatttaatca 19741052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 282
Target Start/End: Complemental strand, 51994313 - 51994199
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| |||| | |||||| || |||||||||||||||||  |||||||||||||||||| ||  |||||   ||   |||||||| ||    
T  51994313 gcttaaatatgtatttgatccttgcaattagggatcgtttaaaaattggtccttgtaatcgctaattctggcaatttacccctgcattgtttaatcattt 51994214  T
Q  268 aaaatttcgtccctc 282  Q
    |||||||||||||||    
T  51994213 aaaatttcgtccctc 51994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 282
Target Start/End: Original strand, 42342781 - 42342906
Alignment:
Q  157 ataaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaa 256  Q
    ||||| || |||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||| |||| | |||| ||  ||||||  ||       
T  42342781 ataaattataggcttaaatatgtatttcatccttacaattaggggtcgtttaaaaattggtccatgtaattgctagtcctggcaatttacccttgcattg 42342880  T
Q  257 tttaatcacttaaaatttcgtccctc 282  Q
    |||||||| |||||||||||||||||    
T  42342881 tttaatcatttaaaatttcgtccctc 42342906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 34142646 - 34142575
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    ||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| |||| ||||    
T  34142646 ggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgttaatactgg 34142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Complemental strand, 3850555 - 3850489
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||| ||| ||||    
T  3850555 ggcttaaatatgtatttcatccctgcaattaggggtcgtttaaaaattggtccctgtattcgataat 3850489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 282
Target Start/End: Complemental strand, 40033891 - 40033769
Alignment:
Q  160 aaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaattt 259  Q
    ||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||  || |||| |||||| |||| ||  ||||||  ||   |||    
T  40033891 aaatataggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtttctataattgctaatcctggcaatttacccttgcattgttt 40033792  T
Q  260 aatcacttaaaatttcgtccctc 282  Q
    ||||| ||||||||| |||||||    
T  40033791 aatcatttaaaattttgtccctc 40033769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 40758147 - 40758213
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||||  |||||||||||||    
T  40758147 ggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccatgtaatcgctaat 40758213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 46474812 - 46474881
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||| |||||||||||||| |||  | |||||| |||||||||||||||||||| ||||||||||||||    
T  46474812 aaaggtttaaatatgtatttcatctttgcaattaggggtcgtttaaaaattggtctctgtaatcgctaat 46474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 36418116 - 36418004
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| |  ||||| |||||||||||||||||||  ||||| |||||||| || | |||||| |||  |||   ||||||| |    
T  36418116 ggcttaaatatgtatttcatccttgtaattaggggtcgtttaaaaattggttcctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 36418017  T
Q  267 taaaatttcgtcc 279  Q
    |||||||||||||    
T  36418016 taaaatttcgtcc 36418004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 1078536 - 1078650
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||| | |||||| ||||| |||||||||||||| ||||||||| ||| ||||||||| || |||   ||| ||||||||     
T  1078536 aggctttaatatgtttttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaa-tctggtaaattaaccttgtaaagtttaatcat 1078634  T
Q  266 ttaaaatttcgtccct 281  Q
    ||||||||||||||||    
T  1078635 ttaaaatttcgtccct 1078650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 281
Target Start/End: Complemental strand, 21186124 - 21186009
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||| ||| | |||||| ||||| |||||||||||||   |||||||| |||| |||| ||| ||||||  ||||  |||||||     
T  21186124 aggctttaatatgtgttttgtccatgcaattaggggtcatttaaaaattggtacatgtaatcgttaatcctggcaaattacccttgcaaaccttaatcat 21186025  T
Q  266 ttaaaatttcgtccct 281  Q
    ||||||||||||||||    
T  21186024 ttaaaatttcgtccct 21186009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 281
Target Start/End: Complemental strand, 43608891 - 43608796
Alignment:
Q  186 tcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    ||||| |||||| || || |||||||||||||| ||||||||| |||| || ||||| || |||  |||| |||||||| ||||||||||||||||    
T  43608891 tccctgcaattagggatcatttaaaaattggtctctgtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttcgtccct 43608796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 47857673 - 47857562
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||| ||||||| |||  |||||  ||||| | ||||||||||||||| ||  |||||||| ||||||||||||| || |||  |||| |||||||| |    
T  47857673 ggctttaatatgtgtttcgtccctgtaattaggtgtcgtttaaaaattgatctttgtaatcgttaattctggtaaattatccttgcaaagtttaatcatt 47857574  T
Q  267 taaaatttcgtc 278  Q
    ||||||||||||    
T  47857573 taaaatttcgtc 47857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 40758539 - 40758409
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| ||||| ||||||||||||||  |||| |||||||| || | ||||||  ||  |||   |||||||     
T  40758539 aggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtctatgtattcgctaatccttgcaaactagtcttgcaatcattaatcat 40758440  T
Q  266 ttaaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||||| |  ||||| |||||||    
T  40758439 ttaaaatttcgtcctttgaccaacttaatca 40758409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 46475205 - 46475080
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||| | |||||| |||||||| || | |||||| |||  |||   ||||||| ||||    
T  46475205 ttaaatatgtatttcatccttacaattaggggtcgtttaaaaattgat-actgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaa 46475107  T
Q  270 aatttcgtccctcaaccaagttaatca 296  Q
    |||||||||| |  ||||| |||||||    
T  46475106 aatttcgtcctttgaccaacttaatca 46475080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 296
Target Start/End: Complemental strand, 25108522 - 25108394
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||| ||||||| ||| |||||| |||||| ||||| ||||||| |||||| ||||||| |||||| |||| |||||  ||   ||||  ||||||| ||    
T  25108522 gctttaatatgtgtttcatccctgcaattaggggtcatttaaaatttggtccctgtaattgctaatcctggcaaactgtccctgcaaacgttaatcattt 25108423  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| ||| |  |||||||||    
T  25108422 aaaatttcgtccttcatcacagttaatca 25108394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 47856386 - 47856494
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||| ||||||| |||  ||||| |||||||| ||||||||||||||||||  |||||||| |||| |||  ||| ||| ||  |||| ||||||||     
T  47856386 aggctttaatatgtgtttcgtccctgcaattaagcgtcgtttaaaaattggtccttgtaatcgttaatcctgacaaattactcttgcaaagtttaatcat 47856485  T
Q  266 ttaaaattt 274  Q
    |||||||||    
T  47856486 ttaaaattt 47856494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 296
Target Start/End: Complemental strand, 53757150 - 53757022
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcactt 267  Q
    |||||||||||||||| || | | ||||||   ||||||||||||||||||  |||| |||||||| || | |||||| |||  |||   ||||||| ||    
T  53757150 gcttaaatatgtatttcattcttgcaattagaagtcgtttaaaaattggtccatgtattcgctaatccttgcaaactaaccttgcaatcattaatcattt 53757051  T
Q  268 aaaatttcgtccctcaaccaagttaatca 296  Q
    |||||||||||| | |||||| |||||||    
T  53757050 aaaatttcgtcctttaaccaacttaatca 53757022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 279
Target Start/End: Original strand, 3849028 - 3849143
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    ||||||||||||||| | || |||||| |||||| | |||||||||||||||||| ||||| ||| |||| || | |||||| ||   |||   ||||||    
T  3849028 aaaggcttaaatatgaaattcatccctgcaattaggagtcgtttaaaaattggtccctgtattcgttaatccttgcaaactagccctgcaatcattaatc 3849127  T
Q  264 acttaaaatttcgtcc 279  Q
    | ||||||||||||||    
T  3849128 atttaaaatttcgtcc 3849143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 26463629 - 26463680
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattg 215  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||||||||||    
T  26463629 aaaggtttaaatatgtatttcatccttgcaattaagggtcgtttaaaaattg 26463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 51993963 - 51994030
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||| |||  | ||||||  ||||||||||||||||||| ||||| ||||||||    
T  51993963 aggcttaaatatgtatttgatctttgcaattagaggtcgtttaaaaattggtccctgtattcgctaat 51994030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 36417714 - 36417800
Alignment:
Q  193 aattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtcc 279  Q
    ||||| |||||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| ||||||||||||||    
T  36417714 aattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcc 36417800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 53856488 - 53856434
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    |||||||||||||||||||| |||||| ||| || |||||| |||||||||||||    
T  53856488 aaaggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtc 53856434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 21783403 - 21783525
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaa 269  Q
    |||||||||||||| |||| |  |||||||||||||||  ||||||||  ||||| |||||||| || | |||||| ||||||||| | |||||| | ||    
T  21783403 ttaaatatgtatttcatccttgtaattaagggtcgttt--aaattggttcctgtattcgctaatccttgcaaactatcctctcaaagtataatcattgaa 21783500  T
Q  270 aatttcgtccctcaaccaagttaat 294  Q
    || || |||||| | || |||||||    
T  21783501 aaattggtccctgagcctagttaat 21783525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 4323639 - 4323559
Alignment:
Q  158 taaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    ||||||||||| ||||  |||| ||| | |||| |||||| | |||||||||||||| ||| |||||||||||||| ||||    
T  4323639 taaaataaaggtttaaggatgtgtttcacccctgcaattaggcgtcgtttaaaaattcgtccctgtaatcgctaatcctgg 4323559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 281
Target Start/End: Original strand, 6956254 - 6956362
Alignment:
Q  173 aatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaat 272  Q
    ||||||| |||  ||||| |||||| || || |||||||||| ||| || |||||| |||| |||| ||| ||||||  |||| || ||||| |||||||    
T  6956254 aatatgtgtttcgtccctgcaattagggatcatttaaaaattagtccctataatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaat 6956353  T
Q  273 ttcgtccct 281  Q
    |||||||||    
T  6956354 ttcgtccct 6956362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 281
Target Start/End: Complemental strand, 32431614 - 32431506
Alignment:
Q  173 aatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaat 272  Q
    |||||||||||  |||||  ||||| ||||| |||||||||||||| ||| ||||| |||| |||  ||| || |||  |||| ||||| || |||||||    
T  32431614 aatatgtatttcgtccctgtaattaggggtcatttaaaaattggtccctgcaatcgttaatcctgacaaattagccttgcaaagtttaaccatttaaaat 32431515  T
Q  273 ttcgtccct 281  Q
    |||||||||    
T  32431514 ttcgtccct 32431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 36150530 - 36150578
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    |||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  36150530 ttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtc 36150578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 286
Target Start/End: Complemental strand, 26479321 - 26479234
Alignment:
Q  199 gggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaacc 286  Q
    ||||| |||||||| ||||| ||||||||  ||||  ||| || || ||||| |||| |||||||||||||||||| |||||| ||||    
T  26479321 gggtcatttaaaaaatggtctctgtaatccttaatcgtggcaacctgccctcccaaagtttaatcacttaaaattttgtcccttaacc 26479234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 33154877 - 33155004
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||| ||||| |||  ||| | |||||| ||||| |||||||||||||| ||||||||| |||| |||  ||| || |||   ||| |||||||| |    
T  33154877 ggcttaagtatgtgtttcgtccatgcaattaggggtcatttaaaaattggtccctgtaatcgttaatcctgacaaattatccttgtaaagtttaatcatt 33154976  T
Q  267 taaaatttcgtccctcaaccaagttaat 294  Q
    ||| | || ||||||||||| |||||||    
T  33154977 taagaattggtccctcaacccagttaat 33155004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 41558007 - 41558058
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggt 217  Q
    |||||||||||||||||| || | | |||||| |||||||||||||||||||    
T  41558007 aggcttaaatatgtatttcattcttgcaattatgggtcgtttaaaaattggt 41558058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 41558306 - 41558263
Alignment:
Q  171 taaatatgtattttatcccttcaattaagggtcgtttaaaaatt 214  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||    
T  41558306 taaatatgtatttcatccctgcaattaggggtcgtttaaaaatt 41558263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 42343156 - 42343093
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| |  ||||||||||||||||||||||| ||  |||| ||||||||    
T  42343156 ttaaatatgtatttcatccttgtaattaagggtcgtttaaaaattgatccatgtattcgctaat 42343093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 43384275 - 43384394
Alignment:
Q  159 aaaataaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatt 258  Q
    |||| ||||||| |||||||||||  |||  | |||||| || || |||||||||||||| |||||||||||||| |||  ||  ||||||  ||   ||    
T  43384275 aaaaaaaaggctgaaatatgtattccatctttgcaattacggatcctttaaaaattggtccctgtaatcgctaatcctgacaatttacccttgcattgtt 43384374  T
Q  259 taatcacttaaaatttcgtc 278  Q
    |||||| |||||||||||||    
T  43384375 taatcatttaaaatttcgtc 43384394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 53856015 - 53856066
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||||| |||||| ||| || |||||| |||||||||||||    
T  53856015 ggcttaaatatgtatttgatccctgcaaataggggtcgcttaaaaattggtc 53856066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 55052295 - 55052358
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||| |||| |  ||||| ||||||| |||||||||||| ||||| ||||||||    
T  55052295 ttaaatatgtatttgatccttataattaggggtcgtctaaaaattggtctctgtattcgctaat 55052358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 4521825 - 4521795
Alignment:
Q  252 caaaatttaatcacttaaaatttcgtccctc 282  Q
    |||||||||||||||||||||||||||||||    
T  4521825 caaaatttaatcacttaaaatttcgtccctc 4521795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 9368723 - 9368669
Alignment:
Q  173 aatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatc 227  Q
    |||||||||||  ||| | |||||| |||||||||||||||||||| ||||||||    
T  9368723 aatatgtatttcgtccttgcaattaggggtcgtttaaaaattggtccctgtaatc 9368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 20704670 - 20704640
Alignment:
Q  252 caaaatttaatcacttaaaatttcgtccctc 282  Q
    |||||||||||||||||||||||||||||||    
T  20704670 caaaatttaatcacttaaaatttcgtccctc 20704640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 26464016 - 26463962
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtca 219  Q
    ||||||||||||||||||| |||| | ||||||  | ||||||||||||||||||    
T  26464016 aaggcttaaatatgtatttcatccttgcaattagagatcgtttaaaaattggtca 26463962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 44654846 - 44654816
Alignment:
Q  252 caaaatttaatcacttaaaatttcgtccctc 282  Q
    |||||||||||||||||||||||||||||||    
T  44654846 caaaatttaatcacttaaaatttcgtccctc 44654816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 9292245 - 9292294
Alignment:
Q  169 cttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtc 218  Q
    ||||||||||||||| |||| | |||||| || |||||||||||||||||    
T  9292245 cttaaatatgtatttcatccttgcaattagggatcgtttaaaaattggtc 9292294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 233
Target Start/End: Original strand, 35712045 - 35712110
Alignment:
Q  168 gcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| |||| | |||||| || || ||||||||||||||  |||| ||||||||    
T  35712045 gcttaaatatgtatttcatccttgcaattagggatcatttaaaaattggtccatgtattcgctaat 35712110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 2796527 - 2796459
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||| || |||| | |||||| | || |||||||||||||||  |||| ||||||||    
T  2796527 aaggcttaaatatgtacttcatccttgcaattaggagttgtttaaaaattggtccatgtattcgctaat 2796459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 23272823 - 23272895
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||| ||||||| ||| |||||| |||||| || |  |||||||||||||  |||||||||||||| ||||    
T  23272823 aggctttaatatgtctttcatccctgcaattagggattatttaaaaattggtatctgtaatcgctaatcctgg 23272895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 43607786 - 43607846
Alignment:
Q  173 aatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||| |||  ||||| |||||||| ||| |||||||||||||| ||||||||| ||||    
T  43607786 aatatgtgtttcgtccctgcaattaagcgtcatttaaaaattggtccctgtaatcgttaat 43607846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 1768 - 1884
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||| | |||||| |||||||| ||||||||||| ||||||||||||||  ||| ||  ||||||  ||   ||||||||     
T  1768 aggcttaaatatgtatttgatccttgcaattaggggtcgttaaaaaattggtccctgtaatcgctaatcttggcaatttacccttgcattgtttaatcat 1867  T
Q  266 ttaaaatttcgtccctc 282  Q
    |||||||||||||||||    
T  1868 ttaaaatttcgtccctc 1884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 2172 - 2103
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||| ||| ||||||    
T  2172 aaaggcttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgaaattgctaat 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 279
Target Start/End: Complemental strand, 6510 - 6395
Alignment:
Q  164 aaaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatc 263  Q
    |||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||| |||||||| || | ||| || |||  |||   ||||||    
T  6510 aaaggcttaaatatgtatttcatccttgcaattaggggtcgtttaaaaattggtccctgtattcgctaatccttgcaaagtagccttgcaatcattaatc 6411  T
Q  264 acttaaaatttcgtcc 279  Q
    | ||||||||||||||    
T  6410 atttaaaatttcgtcc 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 68965 - 69080
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | |||||| ||||| |||||||||||||| |||||||| ||||| |||| ||  ||||||  ||   |||||||| |    
T  68965 ggcttaaatatgtatttcatccttgcaattaggggtcatttaaaaattggtccctgtaatcactaatcctggcaatttacccttgcattgtttaatcatt 69064  T
Q  267 taaaatttcgtccctc 282  Q
    ||||||||||||||||    
T  69065 taaaatttcgtccctc 69080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 69393 - 69264
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||||||||| |||| | ||||||   |||||||||||||||||| ||||| |||||||| || | |||||| |||  |||   ||||||| |    
T  69393 ggcttaaatatgtatttcatccttgcaattagatgtcgtttaaaaattggtccctgtattcgctaatccttgcaaactagccttgcaatcattaatcatt 69294  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| | |||||| |||||||    
T  69293 taaaatttcgtcctttaaccaacttaatca 69264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 166 - 279
Target Start/End: Original strand, 4961 - 5074
Alignment:
Q  166 aggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcac 265  Q
    |||||||||||||||||| |||||| |||||| ||||||||||||||||| || || || |||||||| || | |||||| |||  |||   |||||||     
T  4961 aggcttaaatatgtatttcatccctacaattaggggtcgtttaaaaattgatccctatattcgctaatccttgcaaactagccttgcaattattaatcat 5060  T
Q  266 ttaaaatttcgtcc 279  Q
    ||||||||||||||    
T  5061 ttaaaatttcgtcc 5074  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 139675 - 139743
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||||||| |||| | |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  139675 ttaaatatgtatttgatccttgcaattaggggtcgtttaaaaattggtccctgtaatcgctaatcctgg 139743  T

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Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 140066 - 139991
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaacta 245  Q
    |||||||||||||| |||| | |||||| |||| ||||||||||||||| ||||| || |||||||| | ||||||    
T  140066 ttaaatatgtatttgatccttgcaattaggggttgtttaaaaattggtccctgtattcactaattcttgcaaacta 139991  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 282
Target Start/End: Complemental strand, 37993 - 37876
Alignment:
Q  165 aaggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatca 264  Q
    ||||||||||||||||||| |||| | |||||| | ||||||||||||||||||  ||||||||||||| |||  ||  ||||||   |   ||||||||    
T  37993 aaggcttaaatatgtatttcatccttgcaattaggagtcgtttaaaaattggtctttgtaatcgctaatcctgacaatttacccttgtattgtttaatca 37894  T
Q  265 cttaaaatttcgtccctc 282  Q
     |||||||||||||||||    
T  37893 tttaaaatttcgtccctc 37876  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 37564 - 37693
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcact 266  Q
    ||||||||||| ||||| |||| | ||||||  | |||||||||||||||||  |||| ||||||||||| | ||||||  ||  |||   ||||||| |    
T  37564 ggcttaaatatatatttcatccttgcaattagagatcgtttaaaaattggtccttgtattcgctaattctagcaaactattcttgcaatcattaatcatt 37663  T
Q  267 taaaatttcgtccctcaaccaagttaatca 296  Q
    ||||||||||||| |  ||||| |||||||    
T  37664 taaaatttcgtcctttgaccaacttaatca 37693  T

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Target: scaffold0075 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 14818 - 14747
Alignment:
Q  167 ggcttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaattctgg 238  Q
    |||||||||||| |||| |||| | |||||| |||||||||||||||||||| || ||||||||||| ||||    
T  14818 ggcttaaatatgaatttcatccttgcaattaggggtcgtttaaaaattggtctctctaatcgctaatcctgg 14747  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 281
Target Start/End: Complemental strand, 239947 - 239865
Alignment:
Q  199 gggtcgtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccct 281  Q
    ||||| |||||||||||||  ||||||||| |||| |||| ||| ||||||  |||| |||||||| ||||||||||||||||    
T  239947 gggtcatttaaaaattggttcctgtaatcgataatcctggcaaattacccttccaaagtttaatcatttaaaatttcgtccct 239865  T

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Target: scaffold0008; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 238292 - 238374
Alignment:
Q  204 gtttaaaaattggtcactgtaatcgctaattctggtaaactaccctctcaaaatttaatcacttaaaatttcgtccctcaacc 286  Q
    ||||||||||||||   |||||| | |||| |||  ||||||||||| |||| |||||||  |||||||||||||||| ||||    
T  238292 gtttaaaaattggttcttgtaatagttaatcctgagaaactaccctcccaaagtttaatcttttaaaatttcgtcccttaacc 238374  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 19860 - 19923
Alignment:
Q  170 ttaaatatgtattttatcccttcaattaagggtcgtttaaaaattggtcactgtaatcgctaat 233  Q
    ||||||||||||||  ||| | |||||| |||||||||||||||||||| |||| |||||||||    
T  19860 ttaaatatgtatttcgtccttgcaattatgggtcgtttaaaaattggtccctgtgatcgctaat 19923  T

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Target: scaffold0100 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 31255 - 31206
Alignment:
Q  246 ccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagttaatc 295  Q
    |||| ||||||||||||||||||||||||||||||||  |||| ||||||    
T  31255 ccctatcaaaatttaatcacttaaaatttcgtccctctcccaaattaatc 31206  T

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Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 31703 - 31753
Alignment:
Q  246 ccctctcaaaatttaatcacttaaaatttcgtccctcaaccaagttaatca 296  Q
    ||||| |||||||||||||||||||| || ||| ||||||| |||||||||    
T  31703 ccctcccaaaatttaatcacttaaaaattggtctctcaacccagttaatca 31753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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