View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2746_high_36 (Length: 245)
Name: NF2746_high_36
Description: NF2746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2746_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 54058620 - 54058845
Alignment:
| Q |
1 |
tagagaagcaagacagaaaagtgaaaaaactgtgaaaaatgctactgatgcagttgttaatacaacaatatcaagggttgatgagaatggagttaatgca |
100 |
Q |
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| T |
54058620 |
tagagaagcaagacagaaaagtgaaaaaactgtgaaaaatgctactgatgcagttgttaatacaacaatatcaagggttgatgagaatggagttgatgca |
54058719 |
T |
|
| Q |
101 |
gaatcaaaaactgaggagcagcatgtggagactatggctggtaatggtttaaatgtaacagaatctaaaactgaggagaagcttattgacacaatggttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
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| T |
54058720 |
gaatcaaaaactgaggagcagcatgtggagactatggctggtaatggtttaaatgtaacagaatctaaaactgaggagaaacttattgacacaatgattg |
54058819 |
T |
|
| Q |
201 |
ataaaagtgtcgttgaatctaaaaat |
226 |
Q |
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|||||||||||||||||||||||||| |
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| T |
54058820 |
ataaaagtgtcgttgaatctaaaaat |
54058845 |
T |
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