View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2746_low_50 (Length: 229)
Name: NF2746_low_50
Description: NF2746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2746_low_50 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 163524 - 163752
Alignment:
| Q |
1 |
tgcctatatatggtggagttggtggatactgaagcatcatgtagttgatgttttgctttagttaacagagctatcaatgatgggacataaacagaccatt |
100 |
Q |
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| T |
163524 |
tgcctatatgtggtggagttggtggatactgaagcatcatgtagttgatgttttgctttagttaacagagctatcaatgatgggacataaacagaccatt |
163623 |
T |
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| Q |
101 |
tgatgttggtataagttcaactccaagaaagtaatgaggatttctcatgtttttaaaaccaaatgtttcattaaaatgaactcttacacattgagtaaag |
200 |
Q |
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| T |
163624 |
tgacattggtataagttcaactccaagaaagtaatgaggatttctcatgtttttaaaaccaaatgtttcattaaaaggaactcttacacattgagtaaag |
163723 |
T |
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| Q |
201 |
cctttggccataaggcgtgctttgtacat |
229 |
Q |
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| T |
163724 |
cctttggccataaggcgtgctttgtacat |
163752 |
T |
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