View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_10 (Length: 505)
Name: NF2747_high_10
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 487; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 1 - 495
Target Start/End: Complemental strand, 45272402 - 45271908
Alignment:
| Q |
1 |
tgtgaggcaatgtgatgcataagtaaaagacatttcaccttataaaccagttttgtatgattgagttagacgcaattctaaatattcaaaacaataatat |
100 |
Q |
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| T |
45272402 |
tgtgaggcaatgtgatgcataagtaaaagacatttcaccttataaaccagttttgtatgattgagttagacgcaattctaaatattcaaaacaataatat |
45272303 |
T |
|
| Q |
101 |
acattatcaagattttgatctcaattagtctctattatttgattattcaggttgttgaaatcgaaacagctcctaagaaaaaaggacatcataagagaag |
200 |
Q |
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| T |
45272302 |
acattatcaagattttgatctcaattagtctctattatttgattattcaggttgttgaaatcgaaacagctcctaagaaaaaaggacatcataagagaag |
45272203 |
T |
|
| Q |
201 |
gaaattggtggcgatgaagaagaatctactcaacgttaagaatctgcagaagaatagcatgaacaaaatgatggcctgcgctggcaatgatagaagaaaa |
300 |
Q |
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| T |
45272202 |
gaaattggtggcgatgaagaagaatctactcaacgttaagaatctgcagaagaatagcatgaacaaaatgatggcctgcgctggcaatgatagaagaaaa |
45272103 |
T |
|
| Q |
301 |
cttcttgcggatcattgattaatacattagttcctgctagaacgaatgttgaagacacattaattatataataacttagaaataagtgtttctttgtttg |
400 |
Q |
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| T |
45272102 |
cttcttgcggatcattgattaatacattagttgctgctagaacgaatgttgaagacacattaattatataataacttagaaataagtgtttctttgtttg |
45272003 |
T |
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| Q |
401 |
ggaatttctaggcatttttgggttcaatttcttctgaatccacatatactggtagctaaatgtatgtaatactatttgatcatatttagaataat |
495 |
Q |
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| T |
45272002 |
ggaatttctaggcattttttggttcaatttcttctgaatccacatatactggtagctaaatgtatgtaatactatttgatcatatttagaataat |
45271908 |
T |
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