View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_19 (Length: 366)
Name: NF2747_high_19
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 23 - 348
Target Start/End: Original strand, 23606068 - 23606390
Alignment:
| Q |
23 |
ctttgtatgcatttagatgaacctcattagatttctttcctttataatattttttatatttaaataagtatatggggatacgacaagacttgagaaaccc |
122 |
Q |
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| T |
23606068 |
ctttgtatgcatttagatgaacctgattagatttctttcctttataatattttttatatttaaataagtatatggggatacgacaagacgtgagaaaccc |
23606167 |
T |
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| Q |
123 |
ttcttcttccaaggcacagcagcacacacaacaatcagcgcaaaagcccgttattcttgaggaattgaatagcatgatccttcacctatcatgtcttgtt |
222 |
Q |
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| T |
23606168 |
ttcttcttccaaggcacagc---acacacaacaatcagcgcaaaagcccgttattcttgaggaattgaatagcatgatccttcacctatcatgtcttgtt |
23606264 |
T |
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| Q |
223 |
ttacaccctgtacttcgttgactgcatgtcttagcatgcaacagtcacattaatggcactaacgtccaacatcaacttggtgttttggtttagtaatctg |
322 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23606265 |
ttacaccctgtacttcgttgactgcatgtcttagcatgcaacagtcacattaatggcactaacgtccaacatcaacttggtgttttggtttagtaatctg |
23606364 |
T |
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| Q |
323 |
catgccctaaaccattccaaacttaa |
348 |
Q |
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|||||||||||||||||||||||||| |
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| T |
23606365 |
catgccctaaaccattccaaacttaa |
23606390 |
T |
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