View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_26 (Length: 331)
Name: NF2747_high_26
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_26 |
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Alignment Details
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 315
Target Start/End: Original strand, 4257759 - 4258076
Alignment:
| Q |
1 |
ggatttgagtttttgtcatgtgatggatgaagatgttcatgaacaaatctctgatgcaatgatta---ggagattggctataaataccagttccaagaat |
97 |
Q |
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| T |
4257759 |
ggatttgagtttttgtcatgtgatggatgaagatggtcatgaacaaatctctgatgcaatgattattaggagattggctataaataccagttccaagaat |
4257858 |
T |
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| Q |
98 |
gtgctaaggagcattgaaaacttccccatacgctccctatatatatttgatgctttaataaaattttctgattactttgggagtaggttctttgcaaagt |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
4257859 |
gtgctaaggagcattgaaaacttccccatacgctccctatatatattcgatgctttaataaaattatctgattactttgggagtaggttctttgcaaagt |
4257958 |
T |
|
| Q |
198 |
ctaagcttttgaaagtattggacttggaaggtacttggttggactatattcctgatgatcttggaaatatgtttcacttaaagtatttgagcttaagata |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4257959 |
ctaagcttttgaaagtattggacttggaaggtacttggttggactatattcctgatgatcttggaaatatgtttcacttaaagtatttgagcttaagata |
4258058 |
T |
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| Q |
298 |
taccaatgtcaagaatct |
315 |
Q |
| |
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|||||||||||||||||| |
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| T |
4258059 |
taccaatgtcaagaatct |
4258076 |
T |
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