View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2747_high_29 (Length: 312)

Name: NF2747_high_29
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2747_high_29
NF2747_high_29
[»] chr3 (32 HSPs)
chr3 (22-312)||(45272182-45272471)
chr3 (24-81)||(4048094-4048147)
chr3 (22-82)||(8097278-8097334)
chr3 (22-82)||(26174255-26174311)
chr3 (22-82)||(53848433-53848489)
chr3 (22-81)||(24407403-24407458)
chr3 (22-81)||(49258262-49258317)
chr3 (22-81)||(52821636-52821691)
chr3 (23-82)||(53424176-53424231)
chr3 (24-82)||(10083818-10083872)
chr3 (24-82)||(10190741-10190795)
chr3 (22-82)||(15566499-15566555)
chr3 (22-82)||(24165714-24165770)
chr3 (22-82)||(40133448-40133504)
chr3 (22-80)||(25379903-25379957)
chr3 (29-82)||(3747730-3747779)
chr3 (25-82)||(52455648-52455701)
chr3 (26-82)||(8456149-8456201)
chr3 (22-82)||(30257766-30257822)
chr3 (25-81)||(39041852-39041904)
chr3 (22-82)||(45529754-45529809)
chr3 (22-82)||(46576490-46576546)
chr3 (22-82)||(48977530-48977586)
chr3 (22-82)||(53233910-53233965)
chr3 (22-81)||(18176887-18176942)
chr3 (22-81)||(21363085-21363140)
chr3 (22-81)||(32151566-32151621)
chr3 (22-81)||(35493053-35493108)
chr3 (22-81)||(54475823-54475878)
chr3 (22-80)||(48105019-48105073)
chr3 (24-81)||(7485531-7485583)
chr3 (22-50)||(55371321-55371349)
[»] scaffold0576 (1 HSPs)
scaffold0576 (22-82)||(5081-5137)
[»] chr8 (16 HSPs)
chr8 (22-82)||(2639410-2639466)
chr8 (22-82)||(4718791-4718847)
chr8 (22-82)||(8765525-8765581)
chr8 (22-81)||(21603376-21603431)
chr8 (23-82)||(34237654-34237709)
chr8 (22-81)||(42643118-42643173)
chr8 (22-80)||(28193620-28193674)
chr8 (22-82)||(2618332-2618388)
chr8 (26-82)||(3734622-3734674)
chr8 (22-82)||(32879425-32879481)
chr8 (22-81)||(10292200-10292255)
chr8 (22-82)||(14633100-14633156)
chr8 (22-81)||(25248493-25248547)
chr8 (22-82)||(39349402-39349458)
chr8 (23-82)||(4698722-4698777)
chr8 (27-82)||(42328155-42328206)
[»] chr7 (20 HSPs)
chr7 (22-82)||(2751417-2751473)
chr7 (22-82)||(21217832-21217888)
chr7 (22-82)||(22120034-22120090)
chr7 (22-82)||(40542909-40542965)
chr7 (22-81)||(7275423-7275478)
chr7 (22-81)||(31712902-31712957)
chr7 (24-82)||(16374142-16374196)
chr7 (24-82)||(42913512-42913566)
chr7 (22-82)||(654704-654760)
chr7 (22-82)||(7175861-7175917)
chr7 (22-82)||(11997995-11998051)
chr7 (22-82)||(21835297-21835353)
chr7 (22-82)||(27312298-27312354)
chr7 (22-81)||(3851903-3851958)
chr7 (22-81)||(17196950-17197005)
chr7 (24-82)||(23092244-23092298)
chr7 (22-82)||(22703632-22703688)
chr7 (30-82)||(28089973-28090021)
chr7 (24-82)||(31197738-31197792)
chr7 (26-80)||(32849741-32849791)
[»] chr6 (18 HSPs)
chr6 (22-82)||(3222635-3222691)
chr6 (22-82)||(15360097-15360153)
chr6 (22-82)||(34147488-34147544)
chr6 (22-82)||(34160104-34160160)
chr6 (22-81)||(654146-654201)
chr6 (22-80)||(9239117-9239171)
chr6 (22-82)||(21148510-21148566)
chr6 (22-81)||(28672209-28672264)
chr6 (24-82)||(1345079-1345133)
chr6 (24-81)||(9690638-9690691)
chr6 (25-82)||(14213027-14213080)
chr6 (22-57)||(12390567-12390602)
chr6 (22-82)||(21982320-21982375)
chr6 (22-81)||(5360071-5360126)
chr6 (22-81)||(11449013-11449068)
chr6 (24-81)||(11841044-11841097)
chr6 (22-50)||(32596218-32596246)
chr6 (22-50)||(33499617-33499645)
[»] chr5 (23 HSPs)
chr5 (22-82)||(8484660-8484716)
chr5 (22-82)||(18207349-18207405)
chr5 (22-82)||(19456210-19456266)
chr5 (22-82)||(27498730-27498786)
chr5 (22-82)||(30485970-30486026)
chr5 (22-82)||(37495196-37495252)
chr5 (22-82)||(41351103-41351159)
chr5 (22-81)||(19145412-19145467)
chr5 (22-81)||(22693077-22693132)
chr5 (22-82)||(7085625-7085681)
chr5 (26-82)||(10631288-10631340)
chr5 (25-81)||(11926501-11926553)
chr5 (22-82)||(33709502-33709558)
chr5 (22-82)||(38630978-38631034)
chr5 (22-81)||(27487554-27487609)
chr5 (23-82)||(38684350-38684405)
chr5 (24-81)||(9659311-9659364)
chr5 (24-81)||(23270522-23270575)
chr5 (22-82)||(10869564-10869620)
chr5 (22-82)||(15641105-15641160)
chr5 (22-82)||(32059439-32059495)
chr5 (22-82)||(35425155-35425211)
chr5 (24-81)||(34310286-34310339)
[»] chr4 (20 HSPs)
chr4 (22-82)||(34844757-34844813)
chr4 (22-82)||(40058851-40058907)
chr4 (22-80)||(52983761-52983815)
chr4 (24-81)||(23639768-23639821)
chr4 (24-81)||(23645426-23645479)
chr4 (22-82)||(19660531-19660587)
chr4 (22-82)||(27528794-27528850)
chr4 (22-82)||(32986339-32986395)
chr4 (22-82)||(46714535-46714591)
chr4 (22-81)||(9978509-9978564)
chr4 (22-81)||(52494630-52494685)
chr4 (24-82)||(5609201-5609255)
chr4 (24-82)||(45787703-45787757)
chr4 (25-81)||(34723944-34723996)
chr4 (22-82)||(36131509-36131565)
chr4 (22-82)||(44343656-44343712)
chr4 (22-55)||(4065002-4065035)
chr4 (23-81)||(35229311-35229365)
chr4 (22-79)||(20077986-20078039)
chr4 (22-50)||(54127369-54127397)
[»] chr2 (18 HSPs)
chr2 (22-82)||(2140485-2140541)
chr2 (22-82)||(44946052-44946108)
chr2 (22-81)||(11941210-11941265)
chr2 (22-82)||(15038101-15038157)
chr2 (22-82)||(18692102-18692158)
chr2 (22-82)||(28669015-28669071)
chr2 (22-82)||(33827572-33827628)
chr2 (22-82)||(34516413-34516469)
chr2 (22-82)||(35171942-35171998)
chr2 (22-81)||(25293301-25293356)
chr2 (23-82)||(43374329-43374384)
chr2 (22-82)||(14486967-14487023)
chr2 (22-82)||(18976454-18976510)
chr2 (22-82)||(19054168-19054224)
chr2 (22-81)||(27269344-27269399)
chr2 (26-81)||(30466830-30466881)
chr2 (22-55)||(24196144-24196177)
chr2 (24-81)||(44929846-44929899)
[»] chr1 (17 HSPs)
chr1 (22-82)||(4621236-4621292)
chr1 (22-81)||(24122165-24122220)
chr1 (22-82)||(27454863-27454919)
chr1 (25-82)||(7578554-7578607)
chr1 (22-82)||(7766726-7766782)
chr1 (22-82)||(15059401-15059457)
chr1 (24-80)||(34778483-34778535)
chr1 (29-81)||(45859043-45859091)
chr1 (22-81)||(7197247-7197302)
chr1 (21-55)||(8779758-8779792)
chr1 (31-82)||(14603947-14603994)
chr1 (26-81)||(23041668-23041719)
chr1 (22-81)||(24674535-24674590)
chr1 (22-81)||(26513148-26513203)
chr1 (27-81)||(5315478-5315528)
chr1 (22-80)||(17935911-17935965)
chr1 (22-80)||(37351454-37351508)
[»] scaffold0102 (1 HSPs)
scaffold0102 (22-82)||(39234-39290)
[»] scaffold0019 (1 HSPs)
scaffold0019 (22-82)||(161951-162007)
[»] scaffold0217 (1 HSPs)
scaffold0217 (22-81)||(7309-7364)
[»] scaffold0328 (1 HSPs)
scaffold0328 (24-81)||(13047-13100)
[»] scaffold0070 (1 HSPs)
scaffold0070 (22-82)||(40467-40522)
[»] scaffold0199 (1 HSPs)
scaffold0199 (22-81)||(8451-8506)
[»] scaffold0049 (1 HSPs)
scaffold0049 (22-81)||(66896-66951)
[»] scaffold1175 (1 HSPs)
scaffold1175 (22-50)||(2453-2481)


Alignment Details
Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 22 - 312
Target Start/End: Complemental strand, 45272471 - 45272182
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttcnnnnnnnnn---tgtgaggcaatgtgatgcataagtaaa 118  Q
    |||||||||||||||||||||||||||||||| |    |||||||||||||||||||||||            |||||||||||||||||||||||||||    
T  45272471 ggcggtgggattggtcccctcggattagttgact----cttggatcggataccgagttttcaaaaaaaaaaagtgtgaggcaatgtgatgcataagtaaa 45272376  T
Q  119 agacatttcaccttataaaccagttttgtatgattgagttagacgcaattctaaatattcaaaacaataatatacattatcaagattttgatctcaatta 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45272375 agacatttcaccttataaaccagttttgtatgattgagttagacgcaattctaaatattcaaaacaataatatacattatcaagattttgatctcaatta 45272276  T
Q  219 gtctctattatttgattattcaggttgttgaaatcgaaacagctcctaagaaaaaaggacatcataagagaaggaaattggtggcgatgaagaa 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45272275 gtctctattatttgattattcaggttgttgaaatcgaaacagctcctaagaaaaaaggacatcataagagaaggaaattggtggcgatgaagaa 45272182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4048094 - 4048147
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  4048094 cggtgggattggtcccctcggattagttg----attcttggatcggataccgagtttt 4048147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 8097334 - 8097278
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  8097334 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 8097278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 26174255 - 26174311
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  26174255 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 26174311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 53848489 - 53848433
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  53848489 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 53848433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 24407403 - 24407458
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  24407403 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 49258317 - 49258262
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  49258317 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 52821691 - 52821636
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  52821691 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 53424231 - 53424176
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  53424231 gcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 53424176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 10083872 - 10083818
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  10083872 cggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 10083818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 10190795 - 10190741
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  10190795 cggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 10190741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 15566555 - 15566499
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||| ||||||| ||||    |||||||||||||||||||||||    
T  15566555 ggcggtgggattggtcccctcagattagtcgatt----cttggatcggataccgagttttc 15566499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 24165770 - 24165714
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||| ||||||||||||||| ||||    |||||||||||||||||||||||    
T  24165770 ggcggtgggattgttcccctcggattagtcgatt----cttggatcggataccgagttttc 24165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40133504 - 40133448
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| |||||| ||||    |||||||||||||||||||||||    
T  40133504 ggcggtgggattggtcccctcgaattagtcgatt----cttggatcggataccgagttttc 40133448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 25379903 - 25379957
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||| ||||||    
T  25379903 ggcggtgggattggtcccctcggattagtcg----attcttggatcggatactgagttt 25379957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 3747730 - 3747779
Alignment:
Q  29 ggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  3747730 ggattggtcccctcggattagtcgatt----cttggatcggataccgagttttc 3747779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 52455701 - 52455648
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||| |    |||||||||| |||||||||||||||    
T  52455701 ggtgggattggtcccctcggattagtcg----attcttggattggataccgagttttc 52455648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8456201 - 8456149
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||    
T  8456201 gtgggattggtcccctcggattagtcg----attcttgaatcggataccgagttttc 8456149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 30257766 - 30257822
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||| |||||||||||||||||||| |    |||||||||||||||||||| |||||    
T  30257766 ggcggtggcattggtcccctcggattagtcg----attcttggatcggataccgaattttc 30257822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39041904 - 39041852
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||| ||||||||||| ||||    ||||||||||||||||||||||    
T  39041904 ggtgggattggtccactcggattagtcgatt----cttggatcggataccgagtttt 39041852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 45529809 - 45529754
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||| |||||||||||||||||||    
T  45529809 ggcggtgggattggtcccctcggattagtcg----attctt-gatcggataccgagttttc 45529754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 46576490 - 46576546
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||| ||||||||||||| |||||||| ||||    |||||||||||||||||||||||    
T  46576490 ggcggtcggattggtccccttggattagtcgatt----cttggatcggataccgagttttc 46576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 48977530 - 48977586
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |     | |||||||||||||||||||||||    
T  48977530 ggcggtgggattggtcccctcggattagtcg----gtccttggatcggataccgagttttc 48977586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 53233965 - 53233910
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||| |||||||||||||||||||    
T  53233965 ggcggtgggattggtcccctcggattagtcg----attctt-gatcggataccgagttttc 53233910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 18176942 - 18176887
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||| |||||||||| |    ||||||||||||||||| |||||||    
T  18176942 ggcggtgggattggtcccatcggattagtcg----attcttggatcggatacagagtttt 18176887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 21363085 - 21363140
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||| |||||||||||    ||  |||||||||||||||||||||||||    
T  21363085 ggcggtgggattggttccctcggatta----atcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 32151566 - 32151621
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||| |||||||||||||| |||||| ||||    ||||||||||||||||||||||    
T  32151566 ggcggtgagattggtcccctcgaattagtcgatt----cttggatcggataccgagtttt 32151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 35493053 - 35493108
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||| | ||||||||||||    
T  35493053 ggcggtgggattggtcccctcggattagtcg----attcttggattgaataccgagtttt 35493108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 54475823 - 54475878
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||| |||||||| |    ||||||||||| |||||||||||||    
T  54475823 ggcggtgggattggtccccttggattagtcg----attcttggatcagataccgagtttt 54475878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 48105019 - 48105073
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||| |||||||||| |||||||||| ||||    |||||||||||||||||||||    
T  48105019 ggcggtgagattggtcccttcggattagtcgatt----cttggatcggataccgagttt 48105073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 7485583 - 7485531
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||| |||||||||| ||||    ||||||||||||||||||||||    
T  7485583 cggtgggattggtccc-tcggattagtcgatt----cttggatcggataccgagtttt 7485531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 55371349 - 55371321
Alignment:
Q  22 ggcggtgggattggtcccctcggattagt 50  Q
    |||||||||||||||||||||||||||||    
T  55371349 ggcggtgggattggtcccctcggattagt 55371321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 5137 - 5081
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  5137 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 5081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 2639466 - 2639410
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  2639466 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 2639410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 4718791 - 4718847
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  4718791 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 4718847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 8765581 - 8765525
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  8765581 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 8765525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 21603376 - 21603431
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  21603376 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 34237709 - 34237654
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  34237709 gcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 34237654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 42643173 - 42643118
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||| ||||||||    |||||||||||||||||||||||||    
T  42643173 ggcggtgggattggtcccctcgcattagttg----attcttggatcggataccgagtttt 42643118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 28193620 - 28193674
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||    
T  28193620 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 2618332 - 2618388
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||| ||||||||||    
T  2618332 ggcggtgggattggtcccctcggattagtcg----attcttggatcggattccgagttttc 2618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 3734674 - 3734622
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  3734674 gtgggattggtcccctcggattagtcgatt----cttggatcggataccgagttttc 3734622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 32879425 - 32879481
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||||||| |||||||||||||||    
T  32879425 ggcggtgggattggtcccctcggattagtcg----attcttggattggataccgagttttc 32879481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 10292200 - 10292255
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||| ||||||||||||    |||||||||||| ||||||||||||    
T  10292200 ggcggtgggattggtcccttcggattagttg----attcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 14633100 - 14633156
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||| |||||||| |    |||||||||||||||||| |||||||    
T  14633100 ggcggtgggattggtccccttggattagtcg----attcttggatcggataccaagttttc 14633156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 25248493 - 25248547
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| ||||     || ||||||||||||||||||    
T  25248493 ggcggtgggattggtcccctcggattagtcgatt-----tttgatcggataccgagtttt 25248547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 39349402 - 39349458
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||| ||||||||||||||| |    |||||||||||||||||| |||||||    
T  39349402 ggcggtgggattgatcccctcggattagtcg----attcttggatcggataccaagttttc 39349458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 4698777 - 4698722
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||| |    |||| ||||| |||||||||||||||    
T  4698777 gcggtgggattggtcccctcggattagtcg----attcatggattggataccgagttttc 4698722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 42328155 - 42328206
Alignment:
Q  27 tgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||| |||||| ||||    |||||||||||||||||||||||    
T  42328155 tgggattggtcccctcgaattagtcgatt----cttggatcggataccgagttttc 42328206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 2751417 - 2751473
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  2751417 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 2751473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 21217888 - 21217832
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||| |||||||||||||||||    ||||||||||||||||||||||||||    
T  21217888 ggcggtgggattgatcccctcggattagttg----attcttggatcggataccgagttttc 21217832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 22120034 - 22120090
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  22120034 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 22120090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40542965 - 40542909
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  40542965 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 40542909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 7275423 - 7275478
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  7275423 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 7275478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 31712957 - 31712902
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  31712957 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 31712902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 16374142 - 16374196
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  16374142 cggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 16374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 42913566 - 42913512
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||||    |||||| |||||||||||||||||||    
T  42913566 cggtgggattggtcccctcggattagttg----attcttagatcggataccgagttttc 42913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 654760 - 654704
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||    
T  654760 ggcggtgggattggtcccctcggattagtcg----gttcttggatcggataccgagttttc 654704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 7175917 - 7175861
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||| ||||||||    
T  7175917 ggcggtgggattggtcccctcggattagtcg----attcttggatcggatactgagttttc 7175861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 11997995 - 11998051
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| |||||| |    ||||||||||||||||||||||||||    
T  11997995 ggcggtgggattggtcccctcgaattagtcg----attcttggatcggataccgagttttc 11998051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 21835297 - 21835353
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||| |||||||||    
T  21835297 ggcggtgggattggtcccctcggattagtcg----attcttggatcggatatcgagttttc 21835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 27312298 - 27312354
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||| ||||||| |    ||||||||||||||||||||||||||    
T  27312298 ggcggtgggattggtcccctcagattagtcg----attcttggatcggataccgagttttc 27312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 3851903 - 3851958
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||| ||||||||||||||| |    |||||||||||||||||||||||||    
T  3851903 ggcggtgggattgatcccctcggattagtcg----attcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 17197005 - 17196950
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||| |||||| |    |||||||||||||||||||||||||    
T  17197005 ggcggtgggattggtcccctcgaattagtcg----attcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 23092244 - 23092298
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||| |    |||| |||||||||||||||||||||    
T  23092244 cggtgggattggtcccctcggattagtcg----attcatggatcggataccgagttttc 23092298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 22703632 - 22703688
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||| ||||||||||| |||||||    
T  22703632 ggcggtgggattggtcccctcggattagtcg----attctttgatcggatacccagttttc 22703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 28089973 - 28090021
Alignment:
Q  30 gattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  28089973 gattggtcccctcggattagtcgatt----cttggatcggataccgagttttc 28090021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 31197738 - 31197792
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||| ||||||| |    |||||||||||||||| |||||||||    
T  31197738 cggtgggattggtcccctcagattagtcg----attcttggatcggatatcgagttttc 31197792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 32849741 - 32849791
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||| ||||||| ||||    |||||||||||||||||||||    
T  32849741 gtgggattggtcccctcagattagtcgatt----cttggatcggataccgagttt 32849791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 3222691 - 3222635
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  3222691 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 3222635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 15360153 - 15360097
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  15360153 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 15360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 34147488 - 34147544
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  34147488 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 34147544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 34160104 - 34160160
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  34160104 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 34160160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 654201 - 654146
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |||||    |||||||||||||||||||||    
T  654201 ggcggtgggattggtcccctcggattagtcgatta----ttggatcggataccgagtttt 654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 9239117 - 9239171
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||    
T  9239117 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 21148566 - 21148510
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||    
T  21148566 ggcggtgggattggtcccctcggattagtcg----attcttgaatcggataccgagttttc 21148510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 28672209 - 28672264
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    ||||||||||| |||||||||||||    
T  28672209 ggcggtgggattggtcccctcggattagtcg----attcttggatcagataccgagtttt 28672264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 1345079 - 1345133
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||| |||||||| ||||    |||||||||||||||||||||||    
T  1345079 cggtgggattggtccccttggattagtcgatt----cttggatcggataccgagttttc 1345133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 9690691 - 9690638
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||| ||||||||||| ||||    ||||||||||||||||||||||    
T  9690691 cggtgggattggtcctctcggattagtcgatt----cttggatcggataccgagtttt 9690638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 14213027 - 14213080
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||| ||||||||||| ||||    |||||||||||||||||||||||    
T  14213027 ggtgggattggtccactcggattagtcgatt----cttggatcggataccgagttttc 14213080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 12390567 - 12390602
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaa 57  Q
    ||||||||||||||||||||||||||||| ||||||    
T  12390567 ggcggtgggattggtcccctcggattagtcgattaa 12390602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 21982375 - 21982320
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||| |||||||||| ||||    |||||||||||||||||||||||    
T  21982375 ggcggtgggattggtccc-tcggattagtcgatt----cttggatcggataccgagttttc 21982320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 5360126 - 5360071
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||| |||||| |    |||||| ||||||||||||||||||    
T  5360126 ggcggtgggattggtcccctcgaattagtcg----attcttagatcggataccgagtttt 5360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 11449013 - 11449068
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    ||||||| |||||||| ||||||||    
T  11449013 ggcggtgggattggtcccctcggattagtcg----attcttgaatcggatatcgagtttt 11449068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 11841044 - 11841097
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||| ||||||||| |||||| |||||    |||||||||||||||||||||    
T  11841044 cggtgggattagtcccctcgaattagtcgatta----ttggatcggataccgagtttt 11841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 32596218 - 32596246
Alignment:
Q  22 ggcggtgggattggtcccctcggattagt 50  Q
    |||||||||||||||||||||||||||||    
T  32596218 ggcggtgggattggtcccctcggattagt 32596246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Original strand, 33499617 - 33499645
Alignment:
Q  22 ggcggtgggattggtcccctcggattagt 50  Q
    |||||||||||||||||||||||||||||    
T  33499617 ggcggtgggattggtcccctcggattagt 33499645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 8484716 - 8484660
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  8484716 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 8484660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 18207349 - 18207405
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  18207349 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 18207405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 19456266 - 19456210
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  19456266 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 19456210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 27498786 - 27498730
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  27498786 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 27498730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 30485970 - 30486026
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||||     |||||||||||||||||||||||||||    
T  30485970 ggcggtgggattggtcccctcggattagtc----aattcttggatcggataccgagttttc 30486026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 37495196 - 37495252
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  37495196 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 37495252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 41351159 - 41351103
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  41351159 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 41351103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 19145467 - 19145412
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||||||||||||     ||||||||||||||||||||||||    
T  19145467 ggcggtgggattggtcccctcggattagttg----gttcttggatcggataccgagtttt 19145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 22693077 - 22693132
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  22693077 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 22693132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 7085681 - 7085625
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||    
T  7085681 ggcggtgggattggtcccctcggattagtcg----attcttgaatcggataccgagttttc 7085625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 10631340 - 10631288
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  10631340 gtgggattggtcccctcggattagtcgatt----cttggatcggataccgagttttc 10631288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 11926553 - 11926501
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  11926553 ggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 11926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 33709558 - 33709502
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||| ||||||    
T  33709558 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgtgttttc 33709502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 38631034 - 38630978
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||    ||  ||||||||||||||||||||||||||    
T  38631034 ggcggtgggattggtcccctcggatta----atcgattcttggatcggataccgagttttc 38630978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 27487609 - 27487554
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||| |||||||    
T  27487609 ggcggtgggattggtcccctcggattagtcg----attcttggatcggatacagagtttt 27487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 38684350 - 38684405
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||| |    |||||||||||||||||||| |||||    
T  38684350 gcggtgggattggtcccctcggattagtcg----attcttggatcggataccgatttttc 38684405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 9659364 - 9659311
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||| ||||||||||||    |||||||||| ||||||||||||||    
T  9659364 cggtgggattggtcccttcggattagttg----attcttggatgggataccgagtttt 9659311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 23270575 - 23270522
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||||||||||    |||||||||| ||||||| ||||||    
T  23270575 cggtgggattggtcccctcggattagttg----attcttggattggataccaagtttt 23270522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 10869620 - 10869564
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |     ||||||||||||||||| |||||||    
T  10869620 ggcggtgggattggtcccctcggattagtcg----gttcttggatcggataccaagttttc 10869564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 15641160 - 15641105
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||| |||||||||||||||||||    
T  15641160 ggcggtgggattggtcccctcggattagtcg----attctt-gatcggataccgagttttc 15641105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 32059495 - 32059439
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |     | |||||||||||||||||||||||    
T  32059495 ggcggtgggattggtcccctcggattagtcg----gtccttggatcggataccgagttttc 32059439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 35425155 - 35425211
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||| ||||||||||| |    |||||||||||||||||||| |||||    
T  35425155 ggcggtgggattggtcctctcggattagtcg----attcttggatcggataccgaattttc 35425211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 34310286 - 34310339
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||| ||||    ||  |||||||||||||||||||||||||    
T  34310286 cggtgggattggtcccctcgaatta----atcgattcttggatcggataccgagtttt 34310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 34844813 - 34844757
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  34844813 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 34844757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 40058907 - 40058851
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  40058907 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 40058851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 52983761 - 52983815
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||    
T  52983761 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 23639768 - 23639821
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  23639768 cggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 23639821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 23645426 - 23645479
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  23645426 cggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 23645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 19660587 - 19660531
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||| ||||||||||||||| ||||    |||||||||||||||||||||||    
T  19660587 ggcggtgggattgatcccctcggattagtcgatt----cttggatcggataccgagttttc 19660531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 27528850 - 27528794
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||| ||||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  27528850 ggcggtgagattggtcccctcggattagtcgatt----cttggatcggataccgagttttc 27528794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 32986339 - 32986395
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||| |||| |    ||||||||||||||||||||||||||    
T  32986339 ggcggtgggattggtcccctcggaatagtcg----attcttggatcggataccgagttttc 32986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 46714535 - 46714591
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||||||||||     |||||||| ||||||||||||||||||    
T  46714535 ggcggtgggattggtcccctcggattagtc----aattcttgaatcggataccgagttttc 46714591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 9978564 - 9978509
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||| ||||||||||||    |||||| ||||||||||||||||||    
T  9978564 ggcggtgggattggtcccatcggattagttg----attcttagatcggataccgagtttt 9978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 52494630 - 52494685
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||| |||||| |    |||||||||||||||||||||||||    
T  52494630 ggcggtgggattggtcccctcgaattagtcg----attcttggatcggataccgagtttt 52494685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 5609255 - 5609201
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||| ||||||||||||||| ||||    |||||||||||||||||||||||    
T  5609255 cggtgggattgatcccctcggattagtcgatt----cttggatcggataccgagttttc 5609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 45787757 - 45787703
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||| |||||| ||||    |||||||||||||||||||||||    
T  45787757 cggtgggattggtcccctcgaattagtcgatt----cttggatcggataccgagttttc 45787703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 34723944 - 34723996
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||| ||||||||||| ||||    ||||||||||||||||||||||    
T  34723944 ggtgggattggtcctctcggattagtcgatt----cttggatcggataccgagtttt 34723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 36131565 - 36131509
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |||||    || |||| ||||||||||||||    
T  36131565 ggcggtgggattggtcccctcggattagtcgatta----ttagatcagataccgagttttc 36131509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 44343656 - 44343712
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| |||||| |    ||||||| ||||||||||||||||||    
T  44343656 ggcggtgggattggtcccctcgaattagtcg----attcttgaatcggataccgagttttc 44343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 4065002 - 4065035
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgatt 55  Q
    ||||||||||||||||||||||||||||| ||||    
T  4065002 ggcggtgggattggtcccctcggattagtcgatt 4065035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 35229311 - 35229365
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||| |||||| |    |||||||||||||||||||| ||||    
T  35229311 gcggtgggattggtcccctcgaattagtcg----attcttggatcggataccgaatttt 35229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 20078039 - 20077986
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtt 79  Q
    |||||||||||| || ||||||||||||| ||||    ||||||||||||||||||||    
T  20078039 ggcggtgggattagttccctcggattagtcgatt----cttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 54127397 - 54127369
Alignment:
Q  22 ggcggtgggattggtcccctcggattagt 50  Q
    |||||||||||||||||||||||||||||    
T  54127397 ggcggtgggattggtcccctcggattagt 54127369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 2140541 - 2140485
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  2140541 ggcggtgggattggtcccctcggattagtcgatta----ttggatcggataccgagttttc 2140485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 44946108 - 44946052
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  44946108 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 44946052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 11941265 - 11941210
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  11941265 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 11941210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 15038101 - 15038157
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||| ||||||| |    ||||||||||||||||||||||||||    
T  15038101 ggcggtgggattggtcccctcagattagtcg----attcttggatcggataccgagttttc 15038157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 18692102 - 18692158
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| |||||| |    ||||||||||||||||||||||||||    
T  18692102 ggcggtgggattggtcccctcgtattagtcg----attcttggatcggataccgagttttc 18692158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 28669015 - 28669071
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| ||||     ||||||||||||||||||||||    
T  28669015 ggcggtgggattggtcccctcggattagtcgattt----ttggatcggataccgagttttc 28669071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 33827628 - 33827572
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||| |||||||| ||||    |||||||||||||||||||||||    
T  33827628 ggcggtgggattggtccccttggattagtcgatt----cttggatcggataccgagttttc 33827572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 34516469 - 34516413
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||| |||||||    
T  34516469 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccaagttttc 34516413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 35171942 - 35171998
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||| ||||||||||||||||||    
T  35171942 ggcggtgggattggtcccctcggattagtcg----attcttgaatcggataccgagttttc 35171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 25293301 - 25293356
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||| |||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  25293301 ggcgatgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 25293356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 43374384 - 43374329
Alignment:
Q  23 gcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||| |||||||||| ||||    |||||||||||||||||||||||    
T  43374384 gcggtgggattggtcccttcggattagtcgatt----cttggatcggataccgagttttc 43374329  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 14486967 - 14487023
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |     | |||||||||||||||||||||||    
T  14486967 ggcggtgggattggtcccctcggattagtcg----gtccttggatcggataccgagttttc 14487023  T

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Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 18976510 - 18976454
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||||| |||||| |    |||||||||||||||||||| |||||    
T  18976510 ggcggtgggattggtcccctcgaattagtcg----attcttggatcggataccgaattttc 18976454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 19054168 - 19054224
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||| ||||||||||| |    ||||||||||| ||||||||||||||    
T  19054168 ggcggtgggattggtccgctcggattagtcg----attcttggatcagataccgagttttc 19054224  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 27269399 - 27269344
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||| ||||||||||||||| |    |||||||||| ||||||||||||||    
T  27269399 ggcggtgggattgatcccctcggattagtcg----attcttggataggataccgagtttt 27269344  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 30466881 - 30466830
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||| |||||||||| ||||    ||||||||||||||||||||||    
T  30466881 gtgggattggtcccttcggattagtcgatt----cttggatcggataccgagtttt 30466830  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 24196144 - 24196177
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgatt 55  Q
    ||||||||||||||||||||||||||||| ||||    
T  24196144 ggcggtgggattggtcccctcggattagtcgatt 24196177  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 44929899 - 44929846
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||| | |||||| ||||    ||||||||||||||||||||||    
T  44929899 cggtgggattggtccccttgaattagtcgatt----cttggatcggataccgagtttt 44929846  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 4621292 - 4621236
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||    
T  4621292 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagttttc 4621236  T

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Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 24122165 - 24122220
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||||||||||    
T  24122165 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccgagtttt 24122220  T

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Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 27454919 - 27454863
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||| |||||||    
T  27454919 ggcggtgggattggtcccctcggattagtcg----attcttggatcggatacctagttttc 27454863  T

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Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 7578554 - 7578607
Alignment:
Q  25 ggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||| ||||||||||||||||||     ||||||||||||||||||||||    
T  7578554 ggtgggattggttccctcggattagttgattt----ttggatcggataccgagttttc 7578607  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 7766782 - 7766726
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||| |||||||| |||||||||    
T  7766782 ggcggtgggattggtcccctcggattagtcg----attcttgaatcggatatcgagttttc 7766726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 15059457 - 15059401
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||| |||||||||||||| |||||| ||||    |||||||||||||||||||||||    
T  15059457 ggcggtgagattggtcccctcgaattagtcgatt----cttggatcggataccgagttttc 15059401  T

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Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 34778483 - 34778535
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    |||||||||||||||||| |||||||| |    ||||||||||||||||||||||||    
T  34778483 cggtgggattggtccccttggattagtcg----attcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 45859091 - 45859043
Alignment:
Q  29 ggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||    |||||||||||||||| ||||    
T  45859091 ggattggtcccctcggattagttgatta----ttggatcggataccgaatttt 45859043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 7197302 - 7197247
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||| ||||||||||||||||||||| |    |||| ||||||||||||||||||||    
T  7197302 ggcggtgagattggtcccctcggattagtcg----attcatggatcggataccgagtttt 7197247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 8779792 - 8779758
Alignment:
Q  21 aggcggtgggattggtcccctcggattagttgatt 55  Q
    |||||||||||||||||||||||||||||| ||||    
T  8779792 aggcggtgggattggtcccctcggattagtcgatt 8779758  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 14603947 - 14603994
Alignment:
Q  31 attggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||||| ||||    |||||||||||||||||||||||    
T  14603947 attggtcccctcggattagtcgatt----cttggatcggataccgagttttc 14603994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 23041668 - 23041719
Alignment:
Q  26 gtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||| |||||| ||||    ||||||||||||||||||||||    
T  23041668 gtgggattggtcccctcgaattagtcgatt----cttggatcggataccgagtttt 23041719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 24674535 - 24674590
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||||| |||||| |    |||||||||||||||||||| ||||    
T  24674535 ggcggtgggattggtcccctcgtattagtcg----attcttggatcggataccgaatttt 24674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 26513203 - 26513148
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||| |||||||||||||||||| |    |||||||||||| ||||||||||||    
T  26513203 ggcggtgggaatggtcccctcggattagtcg----attcttggatcgaataccgagtttt 26513148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 5315478 - 5315528
Alignment:
Q  27 tgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    |||||||||||||||||||| ||| ||||    ||||||||||||||||||||||    
T  5315478 tgggattggtcccctcggataagtcgatt----cttggatcggataccgagtttt 5315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 17935911 - 17935965
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    |||| |||||||||||| ||||||||||| ||||    |||||||||||||||||||||    
T  17935911 ggcgatgggattggtccactcggattagtcgatt----cttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 37351508 - 37351454
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttt 80  Q
    ||||||||||||||||||||||||||||| |     | |||||||||||||||||||||    
T  37351508 ggcggtgggattggtcccctcggattagtcg----gtccttggatcggataccgagttt 37351454  T

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Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 39234 - 39290
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||| ||||||||||||||    
T  39234 ggcggtgggattggtcccctcggattagtcg----attcttggatcagataccgagttttc 39290  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 161951 - 162007
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    ||||||||||||||||||||||||||||| |    ||||||||||| ||||||||||||||    
T  161951 ggcggtgggattggtcccctcggattagtcg----attcttggatcagataccgagttttc 162007  T

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Target: scaffold0217 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 7364 - 7309
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |    |||||||||||||||||| ||||||    
T  7364 ggcggtgggattggtcccctcggattagtcg----attcttggatcggataccaagtttt 7309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 13100 - 13047
Alignment:
Q  24 cggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||| ||||||| ||||||||||||    ||||||||||||||||||||||    
T  13100 cggtgggattgatcccctcagattagttgatt----cttggatcggataccgagtttt 13047  T

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Target: scaffold0070 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 40467 - 40522
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagttttc 82  Q
    |||||||||||||||||| |||||||||| ||||    |||||||||||||||||||||||    
T  40467 ggcggtgggattggtccc-tcggattagtcgatt----cttggatcggataccgagttttc 40522  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 8506 - 8451
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||| ||||||||||| |    |||||| ||||||||||||||||||    
T  8506 ggcggtgggattggtccgctcggattagtcg----attcttagatcggataccgagtttt 8451  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 66896 - 66951
Alignment:
Q  22 ggcggtgggattggtcccctcggattagttgattaattcttggatcggataccgagtttt 81  Q
    ||||||||||||||||||||||||||||| |     | ||||||||||||||||||||||    
T  66896 ggcggtgggattggtcccctcggattagtcg----gtccttggatcggataccgagtttt 66951  T

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Target: scaffold1175 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 50
Target Start/End: Complemental strand, 2481 - 2453
Alignment:
Q  22 ggcggtgggattggtcccctcggattagt 50  Q
    |||||||||||||||||||||||||||||    
T  2481 ggcggtgggattggtcccctcggattagt 2453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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