View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2747_high_37 (Length: 274)

Name: NF2747_high_37
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2747_high_37
NF2747_high_37
[»] chr3 (30 HSPs)
chr3 (10-255)||(17390931-17391178)
chr3 (10-255)||(15551893-15552144)
chr3 (15-196)||(8602236-8602420)
chr3 (84-255)||(25106337-25106507)
chr3 (23-255)||(15988468-15988700)
chr3 (22-255)||(5230609-5230848)
chr3 (25-255)||(6817630-6817866)
chr3 (10-255)||(11517449-11517698)
chr3 (10-182)||(22637258-22637430)
chr3 (22-191)||(8687809-8687978)
chr3 (22-191)||(9039678-9039847)
chr3 (10-202)||(14182444-14182637)
chr3 (99-202)||(14889902-14890006)
chr3 (63-196)||(37918939-37919074)
chr3 (22-121)||(55513832-55513933)
chr3 (20-255)||(17760801-17761038)
chr3 (20-255)||(19062121-19062358)
chr3 (23-196)||(10902420-10902594)
chr3 (64-176)||(14967813-14967929)
chr3 (10-255)||(17320576-17320824)
chr3 (10-142)||(31416330-31416463)
chr3 (10-174)||(12950495-12950663)
chr3 (84-255)||(43429536-43429710)
chr3 (10-106)||(14819975-14820072)
chr3 (90-201)||(20418776-20418888)
chr3 (18-186)||(18968011-18968181)
chr3 (10-203)||(21168757-21168952)
chr3 (145-191)||(293964-294010)
chr3 (81-182)||(41659614-41659716)
chr3 (10-55)||(38378371-38378416)
[»] chr4 (22 HSPs)
chr4 (18-251)||(19624037-19624273)
chr4 (10-255)||(14569332-14569579)
chr4 (21-251)||(17378196-17378427)
chr4 (10-255)||(41919246-41919495)
chr4 (22-196)||(5373175-5373351)
chr4 (10-255)||(47470331-47470582)
chr4 (20-201)||(19082993-19083178)
chr4 (16-242)||(13596030-13596261)
chr4 (27-196)||(12136342-12136514)
chr4 (81-253)||(50224156-50224331)
chr4 (158-254)||(54366076-54366172)
chr4 (15-150)||(5407103-5407239)
chr4 (15-164)||(19557264-19557413)
chr4 (10-255)||(10239439-10239688)
chr4 (15-111)||(18241332-18241430)
chr4 (22-117)||(54366187-54366284)
chr4 (10-103)||(12729333-12729428)
chr4 (81-201)||(17194501-17194622)
chr4 (209-255)||(24237038-24237084)
chr4 (21-139)||(13449129-13449250)
chr4 (215-255)||(15216238-15216278)
chr4 (23-115)||(24236879-24236974)
[»] scaffold0005 (1 HSPs)
scaffold0005 (10-255)||(247797-248044)
[»] chr7 (29 HSPs)
chr7 (23-203)||(12245631-12245813)
chr7 (10-255)||(17948024-17948273)
chr7 (10-255)||(39294150-39294400)
chr7 (23-203)||(15980566-15980746)
chr7 (10-203)||(3194072-3194267)
chr7 (10-196)||(18081358-18081545)
chr7 (61-255)||(4072991-4073182)
chr7 (84-196)||(17922988-17923101)
chr7 (16-242)||(9640984-9641215)
chr7 (81-164)||(13460367-13460450)
chr7 (17-140)||(4436818-4436947)
chr7 (84-196)||(17926825-17926938)
chr7 (10-164)||(21677589-21677743)
chr7 (16-196)||(28717977-28718159)
chr7 (10-140)||(4444212-4444348)
chr7 (81-148)||(13452260-13452327)
chr7 (81-155)||(18921166-18921240)
chr7 (84-255)||(9323056-9323230)
chr7 (64-187)||(15305423-15305548)
chr7 (81-176)||(31499246-31499342)
chr7 (10-111)||(9058764-9058867)
chr7 (70-203)||(12182217-12182352)
chr7 (22-111)||(9609182-9609274)
chr7 (22-111)||(9836754-9836846)
chr7 (10-251)||(4482194-4482439)
chr7 (22-106)||(5617394-5617481)
chr7 (10-149)||(16381839-16381979)
chr7 (82-133)||(12250207-12250258)
chr7 (22-111)||(48345526-48345617)
[»] chr5 (22 HSPs)
chr5 (23-255)||(11765712-11765945)
chr5 (15-201)||(37985772-37985960)
chr5 (10-251)||(14345671-14345916)
chr5 (63-186)||(11963575-11963700)
chr5 (65-196)||(20456621-20456754)
chr5 (15-255)||(23236407-23236651)
chr5 (15-255)||(19871845-19872089)
chr5 (10-196)||(16837793-16837981)
chr5 (10-164)||(37483080-37483238)
chr5 (158-255)||(33628272-33628369)
chr5 (81-196)||(23411986-23412101)
chr5 (10-186)||(29911973-29912152)
chr5 (10-150)||(3420936-3421079)
chr5 (10-112)||(26561930-26562033)
chr5 (10-203)||(5623470-5623665)
chr5 (65-121)||(33628386-33628442)
chr5 (18-117)||(22879831-22879931)
chr5 (21-111)||(24082051-24082143)
chr5 (22-111)||(24228084-24228175)
chr5 (10-42)||(11963183-11963215)
chr5 (22-106)||(21228526-21228613)
chr5 (22-104)||(21614949-21615033)
[»] scaffold0009 (2 HSPs)
scaffold0009 (22-255)||(256790-257024)
scaffold0009 (15-196)||(98999-99184)
[»] chr8 (32 HSPs)
chr8 (21-255)||(24236968-24237203)
chr8 (20-164)||(22725527-22725672)
chr8 (18-255)||(17264432-17264673)
chr8 (24-198)||(22883730-22883904)
chr8 (22-196)||(16000121-16000295)
chr8 (15-254)||(22499303-22499547)
chr8 (22-186)||(25607837-25608003)
chr8 (23-209)||(11541944-11542134)
chr8 (10-251)||(23216583-23216827)
chr8 (10-255)||(24554573-24554823)
chr8 (10-164)||(17499783-17499940)
chr8 (15-255)||(20707719-20707963)
chr8 (10-256)||(23118837-23119088)
chr8 (10-254)||(18043151-18043399)
chr8 (81-203)||(23350171-23350294)
chr8 (10-139)||(19334125-19334257)
chr8 (15-255)||(45561703-45561951)
chr8 (22-196)||(11600011-11600188)
chr8 (10-106)||(24265921-24266018)
chr8 (22-121)||(24905885-24905986)
chr8 (82-254)||(33170251-33170425)
chr8 (63-196)||(22311036-22311171)
chr8 (10-133)||(18263526-18263651)
chr8 (146-255)||(24905992-24906101)
chr8 (15-251)||(7468232-7468470)
chr8 (173-255)||(23879041-23879127)
chr8 (10-55)||(21234230-21234275)
chr8 (10-97)||(27233352-27233441)
chr8 (145-196)||(22319700-22319751)
chr8 (62-111)||(37655788-37655838)
chr8 (84-128)||(18120528-18120572)
chr8 (10-54)||(33170177-33170221)
[»] chr6 (22 HSPs)
chr6 (23-255)||(16131196-16131433)
chr6 (10-255)||(22595659-22595908)
chr6 (18-255)||(29162912-29163155)
chr6 (10-203)||(17858420-17858615)
chr6 (63-251)||(21929422-21929609)
chr6 (23-164)||(23218920-23219063)
chr6 (15-255)||(15006639-15006872)
chr6 (10-191)||(16373913-16374098)
chr6 (10-203)||(34964858-34965052)
chr6 (21-121)||(19670472-19670574)
chr6 (10-111)||(22846049-22846152)
chr6 (21-155)||(31469614-31469749)
chr6 (81-255)||(22468105-22468283)
chr6 (10-135)||(17375831-17375959)
chr6 (195-255)||(23219093-23219153)
chr6 (23-106)||(7830059-7830145)
chr6 (22-111)||(12311148-12311239)
chr6 (22-101)||(6092467-6092547)
chr6 (10-129)||(941159-941279)
chr6 (10-51)||(9192154-9192195)
chr6 (64-133)||(17085671-17085740)
chr6 (23-111)||(16889948-16890039)
[»] chr2 (15 HSPs)
chr2 (84-239)||(19643889-19644045)
chr2 (10-255)||(6092379-6092628)
chr2 (23-202)||(20270870-20271053)
chr2 (92-255)||(45620441-45620604)
chr2 (10-196)||(18533281-18533473)
chr2 (15-148)||(24839356-24839493)
chr2 (10-176)||(30995059-30995228)
chr2 (10-203)||(24271974-24272169)
chr2 (21-155)||(19648022-19648160)
chr2 (22-106)||(19436069-19436155)
chr2 (22-129)||(22137936-22138046)
chr2 (23-106)||(23823645-23823730)
chr2 (23-106)||(23825589-23825674)
chr2 (23-55)||(25593177-25593209)
chr2 (170-202)||(29111866-29111898)
[»] scaffold0808 (1 HSPs)
scaffold0808 (22-191)||(5284-5456)
[»] scaffold0025 (1 HSPs)
scaffold0025 (23-203)||(2426-2609)
[»] chr1 (20 HSPs)
chr1 (10-255)||(21041718-21041967)
chr1 (10-255)||(33383848-33384098)
chr1 (15-255)||(41213657-41213900)
chr1 (10-196)||(78550-78739)
chr1 (119-255)||(20820475-20820601)
chr1 (10-255)||(40555301-40555550)
chr1 (16-255)||(5770194-5770437)
chr1 (21-133)||(18164147-18164261)
chr1 (22-182)||(5472465-5472630)
chr1 (10-150)||(46143704-46143847)
chr1 (16-147)||(9293507-9293641)
chr1 (23-119)||(20191702-20191800)
chr1 (10-111)||(29217083-29217185)
chr1 (10-133)||(12891448-12891573)
chr1 (20-110)||(21223658-21223749)
chr1 (22-111)||(21193099-21193191)
chr1 (10-117)||(50002084-50002193)
chr1 (62-106)||(22837757-22837801)
chr1 (10-78)||(40438495-40438563)
chr1 (10-78)||(52397586-52397654)
[»] scaffold0032 (2 HSPs)
scaffold0032 (22-203)||(122003-122183)
scaffold0032 (21-129)||(106735-106846)
[»] scaffold0115 (1 HSPs)
scaffold0115 (10-196)||(19267-19455)
[»] scaffold0331 (1 HSPs)
scaffold0331 (21-196)||(11291-11468)
[»] scaffold0086 (1 HSPs)
scaffold0086 (10-155)||(34244-34392)
[»] scaffold0047 (1 HSPs)
scaffold0047 (63-188)||(73350-73477)
[»] scaffold0725 (1 HSPs)
scaffold0725 (22-196)||(7024-7201)
[»] scaffold0216 (1 HSPs)
scaffold0216 (84-196)||(23167-23280)
[»] scaffold0088 (1 HSPs)
scaffold0088 (10-196)||(45639-45828)
[»] scaffold0561 (1 HSPs)
scaffold0561 (23-196)||(4800-4976)
[»] scaffold0017 (1 HSPs)
scaffold0017 (22-196)||(10223-10399)
[»] scaffold0205 (1 HSPs)
scaffold0205 (62-191)||(4450-4583)
[»] scaffold0601 (1 HSPs)
scaffold0601 (92-196)||(3433-3538)
[»] scaffold0387 (1 HSPs)
scaffold0387 (10-150)||(3129-3273)
[»] scaffold0057 (1 HSPs)
scaffold0057 (21-149)||(3898-4029)
[»] scaffold0003 (1 HSPs)
scaffold0003 (10-203)||(99073-99268)
[»] scaffold0231 (2 HSPs)
scaffold0231 (20-167)||(15939-16091)
scaffold0231 (92-187)||(15406-15501)
[»] scaffold0385 (1 HSPs)
scaffold0385 (95-196)||(12522-12624)
[»] scaffold0327 (1 HSPs)
scaffold0327 (10-106)||(7034-7132)
[»] scaffold0148 (1 HSPs)
scaffold0148 (21-139)||(35860-35981)
[»] scaffold0174 (2 HSPs)
scaffold0174 (15-111)||(505-604)
scaffold0174 (92-202)||(22612-22723)
[»] scaffold0073 (2 HSPs)
scaffold0073 (22-196)||(49429-49609)
scaffold0073 (22-196)||(53960-54140)
[»] scaffold0219 (2 HSPs)
scaffold0219 (10-113)||(26158-26263)
scaffold0219 (84-161)||(26062-26140)
[»] scaffold0010 (2 HSPs)
scaffold0010 (22-111)||(29042-29134)
scaffold0010 (81-155)||(123523-123598)
[»] scaffold0236 (1 HSPs)
scaffold0236 (22-106)||(25517-25604)
[»] scaffold0020 (1 HSPs)
scaffold0020 (21-139)||(103922-104041)
[»] scaffold0258 (2 HSPs)
scaffold0258 (10-115)||(8231-8335)
scaffold0258 (143-255)||(8329-8430)
[»] scaffold0031 (1 HSPs)
scaffold0031 (22-111)||(99335-99426)
[»] scaffold0786 (1 HSPs)
scaffold0786 (22-129)||(4685-4795)
[»] scaffold0390 (2 HSPs)
scaffold0390 (22-129)||(3218-3328)
scaffold0390 (22-111)||(16202-16294)
[»] scaffold0133 (1 HSPs)
scaffold0133 (21-139)||(3798-3919)
[»] scaffold0107 (1 HSPs)
scaffold0107 (22-111)||(11375-11467)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-111)||(199487-199584)
[»] scaffold0442 (2 HSPs)
scaffold0442 (15-113)||(14250-14350)
scaffold0442 (21-113)||(2114-2208)
[»] scaffold1068 (1 HSPs)
scaffold1068 (10-43)||(1246-1279)
[»] scaffold0480 (1 HSPs)
scaffold0480 (10-164)||(11090-11247)


Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 17390931 - 17391178
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatttt--ctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||    
T  17390931 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaatttcaaacaacatgcatatataaattttgctcaacagtcgcagcggatataaat 17391030  T
Q  108 catacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaa 207  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||||||||| ||| ||| | ||||||||| |||    
T  17391031 catacatctccaaatatacatgtcataaaatcaatatatatcaatatataaaatctctaaatcccgacatatgggccaaaactcaacaacataaatccaa 17391130  T
Q  208 cataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17391131 cataatcaatctcgaataatcataaagacaaacatcctagatcagagc 17391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 15552144 - 15551893
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||| |||||||||||||||||||| ||| |||||||||||   || | ||||||||||||||||   ||||||||||||||||| |||||||||    
T  15552144 cgaataataaaaatattcaagaaatagacgttacgtcttcaacaaaaaccaaatcaacatgcatatataaaaattctcaacagtcgcagcagatataaat 15552045  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat--- 203  Q
    |||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||||||| ||||||| |||||| ||||||| | |||||||||       
T  15552044 catacatctccaaaatatacatgtcatgagatcaatatacatcatcatataaattctctaaatcccgacaaatgggc-aaatctccacaacataaataag 15551946  T
Q  204 tc-aacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || |  |||| |||||| |||||||||||||||||||||||||||||||||||    
T  15551945 tctagaataaacaatctagaataatcataaagacaaacatcctagatcagagc 15551893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 8602236 - 8602420
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcataca-acatgcatatataat-tttctcaacagtcgcagcggatataaatcatac 112  Q
    ||||||||||||||||||||||||||||| |||||||||||   || ||| ||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  8602236 aatataaatattcaagaaatagacgctacgtcttcaacaaaagccaaacatacatgcatatataaaatttctcaacagtcgcagcggatataagtcatac 8602335  T
Q  113 atctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||| |||| ||  ||||||||||||| |||||||| ||||    
T  8602336 atctccaaaatatacatgtcataagatcaaaatacatcatcatataaattctccaagtcccgacatatgggtaaaatctcaataa 8602420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 84 - 255
Target Start/End: Complemental strand, 25106507 - 25106337
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||  ||||||| ||  ||||| | || ||    
T  25106507 tcaacagtcgcagcggatataaatcatacatctccaaaatatacatatcataagatcaatatgcatcaacata--aaatctccaagtcccgatacatagg 25106410  T
Q  183 caaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||||| | ||||||||| || |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  25106409 caaaatctcaacaacataaatccagcataatcaatctagaataatcacaaagacaaacatcctagatcagagc 25106337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 15988468 - 15988700
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||||||||| ||||||| |||   || | ||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||    
T  15988468 tattcaagaaatagacgctacgtcttcaataaaaaccaaatcaacatgcatatataaaaattctcaacagtcgcagcggatatatatcatacatctccaa 15988567  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctc 220  Q
    | |||||||||||||   ||| ||| ||||| | || ||||||| ||| |||| ||||||||||||||||| |||||| |||| || ||||| ||||||     
T  15988568 a-atacatgtcataactccaa-atatatcaatacatgaaatctccaaaacccgtcatatgggcaaaatctccataacacaaatccagcataaacaatcta 15988665  T
Q  221 gaataatcataaagacaaacatcctagatcagagc 255  Q
    |||||||||||||| || |||||||||||||||||    
T  15988666 gaataatcataaaggcagacatcctagatcagagc 15988700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 5230848 - 5230609
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    |||||||||||||||||||||| |||||||||||    | | ||||||||||||||||   ||||||| ||| |||||| ||||||||||||||||||||    
T  5230848 atattcaagaaatagacgctacgtcttcaacaaaaacaaaatcaacatgcatatataaaaattctcaatagttgcagcgtatataaatcatacatctcca 5230749  T
Q  120 aat-atacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacataatc 214  Q
    ||  |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||| |||||  ||||||| | |||    ||||||  |  |||| |    
T  5230748 aaacatacatgtcataagatcaatatacatcatcatataaaatctccaaatcccgacaaatggg-taaatctccacaacataaataaatatagaataaac 5230650  T
Q  215 aatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  5230649 aatctagaataatcataaagacagacatcctagatcagagc 5230609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 255
Target Start/End: Complemental strand, 6817866 - 6817630
Alignment:
Q  25 ttcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaa- 121  Q
    |||||||||||||||||||||| ||||||||   || | ||||||||||||||||   ||||||||||||||||||||||||||||||||| ||| |||     
T  6817866 ttcaagaaatagacgctacatcatcaacaaaaaccaaatcaacatgcatatataaaaattctcaacagtcgcagcggatataaatcatacacctcaaaag 6817767  T
Q  122 tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacataatcaat 217  Q
    |||||||| ||| ||||||| |||||||| |||||||| |||| ||| ||||||| |||||| ||||||  | |||    |||||| ||| |||| ||||    
T  6817766 tatacatgccatgagatcaaaatacatcatcatataaattctccaaatcccgacaaatgggc-aaatcttcacaacataaataaatccaaaataaacaat 6817668  T
Q  218 ctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || ||||||||||||||||  |||||||||||||||||    
T  6817667 ctagaataatcataaagactgacatcctagatcagagc 6817630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 11517698 - 11517449
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttc-tcaacagtcgcagcggatataaa 106  Q
    |||| ||||||||||||||||||||||||| ||||||||||   |||| |||| |||| ||||||||||||  ||| ||||||  | || | |||| |||    
T  11517698 cgaataatataaatattcaagaaatagacgatacatcttcacatcaaaattcaaacaatatgcatatataaaattcctcaacaaacacaacagataaaaa 11517599  T
Q  107 tcatacatctccaaa--tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaatt 204  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||| |||| |||||||| ||  |||||||||||||||||| ||| | ||||  ||||    
T  11517598 tcatacatctctaaaaatatacatgtcataagatcaatatacatcatcata-aaaatctccaagtcccgacatatgggcaaaaactcaacaacaataatt 11517500  T
Q  205 caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || |||||| ||||| ||||||||||  | ||| ||||||||||| |||||    
T  11517499 cagcataattaatctagaataatcatggaaacagacatcctagatgagagc 11517449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 22637258 - 22637430
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatca 109  Q
    |||| |||||||||||| ||||||||||||| || || |||||||| | || |||||| |||||||||| |||||||||||| |||||||||||||| ||    
T  22637258 cgaataatataaatattgaagaaatagacgccacgtcatcaacaaaatccaaacaacaggcatatataaatttctcaacagttgcagcggatataaacca 22637357  T
Q  110 tacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||| ||| || |||||||||||| ||||||| |||||||| |||| ||| |||| ||| ||||||| |||||    
T  22637358 tacacctcaaagtatacatgtcatgagatcaaaatacatcatcataaaaattctccaaatcccgacaaatggg 22637430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 8687809 - 8687978
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    |||||||||||||||||| ||| ||||||||||||  ||| ||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||  |||    
T  8687809 atattcaagaaatagacgttacgtcttcaacaaataacat-caatatggatatataaaatttctcaacagtcgcagcggatataaatcatacatcatcaa 8687907  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctc 191  Q
    | ||||||| ||| | ||||||||||||||  |||||||||||| ||| |||||||||||||  |||||||    
T  8687908 acatacatgccatgaaatcaatatacatcatgatataaaatctccaaatcccgacatatgggtcaaatctc 8687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 9039678 - 9039847
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    |||||||||||||||||| ||| ||||||||||||  ||| ||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||  |||    
T  9039678 atattcaagaaatagacgttacgtcttcaacaaataacat-caatatggatatataaaatttctcaacagtcgcagcggatataaatcatacatcatcaa 9039776  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctc 191  Q
    | ||||||| ||| | ||||||||||||||  |||||||||||| ||| |||||||||||||  |||||||    
T  9039777 acatacatgccatgaaatcaatatacatcatgatataaaatctccaaatcccgacatatgggtcaaatctc 9039847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 14182637 - 14182444
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatat-aattttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||  ||| | |||||||||||||| ||  || ||||| ||||||||||||||||||    
T  14182637 cgaataatatgaatattcaagaaatagacgctacgtcttcaacaaaaatcaaatcaacatgcatatataaaaattttcaacggtcgcagcggatataaat 14182538  T
Q  108 catacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaa 202  Q
    |||||||| ||||| ||| | |||||||  || | ||| ||||| | || ||||||  ||| ||||| |||||||||||||||| ||||||||||    
T  14182537 catacatcgccaaaaatatacgtcataa-ctccaaatatatcaatacatgaaatcttcaaaacccgagatatgggcaaaatctccataacataaa 14182444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 14889902 - 14890006
Alignment:
Q  99 gatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac 197  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||| | | |||||||||| ||| ||||||| |||||||||||||| |||||    
T  14889902 gatataaatcatacatcaccaaagtatacatgtcataagatcaatatacatccataaataaaatctccaaaacccgacaaatgggcaaaatctccataac 14890001  T
Q  198 ataaa 202  Q
    |||||    
T  14890002 ataaa 14890006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 196
Target Start/End: Complemental strand, 37919074 - 37918939
Alignment:
Q  63 caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc-aaatatacatgtcataagatcaatatacatcaacatataaaa 160  Q
    ||||||||||||||||   |||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||| |||| |||     
T  37919074 caacatgcatatataaaaattctcaacagtcgcagcggatagaaatcatacatctccaaaatatacatgtcatgagatcaaaatacatcatcataaaaat 37918975  T
Q  161 tctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||| ||  ||||||||||| | |||||||| ||||    
T  37918974 tctccaagtcccgacatatgagtaaaatctcaataa 37918939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 121
Target Start/End: Complemental strand, 55513933 - 55513832
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcataca-acatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    ||||||||||||||||||||||||||||||||||   || ||| ||||||||||||||  |||||||||||||||||||||||||| |||||||||||||    
T  55513933 atattcaagaaatagacgctacatcttcaacaaaggccaaacatacatgcatatataaaatttctcaacagtcgcagcggatataagtcatacatctcca 55513834  T
Q  120 aa 121  Q
    ||    
T  55513833 aa 55513832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 17761038 - 17760801
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||| |||||||| |||||||| ||    | |  |||||||||||||||   ||||||||| |||||||||||||| ||||||    ||    
T  17761038 aaatattcaagaaatggacgctacgtcttcaacgaaaacaaaattaacatgcatatataaaaattctcaacattcgcagcggatatagatcata----tc 17760943  T
Q  118 caaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacataa 212  Q
    |||| |||||||||||||||||||| |||||||| |||||||| |||| ||| | ||||| || ||| ||||||| | |||    |||||| ||  ||||    
T  17760942 caaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaatctcgacaaattggc-aaatctcaacaacataaataaatccataataa 17760844  T
Q  213 tcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     |||||| ||||||||||||||||| |||||||||||||||||    
T  17760843 acaatctagaataatcataaagacagacatcctagatcagagc 17760801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 255
Target Start/End: Complemental strand, 19062358 - 19062121
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||| |||||||| |||||||| ||    | |  |||||||||||||||   ||||||||| |||||||||||||| ||||||    ||    
T  19062358 aaatattcaagaaatggacgctacgtcttcaacgaaaacaaaattaacatgcatatataaaaattctcaacattcgcagcggatatagatcata----tc 19062263  T
Q  118 caaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacataa 212  Q
    |||| |||||||||||||||||||| |||||||| |||||||| |||| ||| | ||||| || ||| ||||||| | |||    |||||| ||  ||||    
T  19062262 caaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaatctcgacaaattggc-aaatctcaacaacataaataaatccataataa 19062164  T
Q  213 tcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     |||||| ||||||||||||||||| |||||||||||||||||    
T  19062163 acaatctagaataatcataaagacagacatcctagatcagagc 19062121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 10902420 - 10902594
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatcatacatctccaaa 121  Q
    ||||||||||||||| | ||| |||||||||||    | | ||||||||||||| || || ||||||||| ||||||||||||||| ||||| ||| |||    
T  10902420 tattcaagaaatagatggtacgtcttcaacaaaaactaaatcaacatgcatataaaaatt-ctcaacagttgcagcggatataaattatacacctcaaaa 10902518  T
Q  122 -tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
     |||||||| ||| ||||||| |||||||| |||||||| |||| ||| ||||||||||||| |||||||| ||||    
T  10902519 gtatacatgccatgagatcaaaatacatcatcatataaattctccaaatcccgacatatgggtaaaatctcaataa 10902594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 14967813 - 14967929
Alignment:
Q  64 aacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaaa---tatacatgtcataagatcaatatacatcaacatataaa 159  Q
    |||||||||||||||  ||||||||||||||||||||||||| | ||||||||| ||||   |||||||||||||| |||||||||||||| ||||||||    
T  14967813 aacatgcatatataaaatttctcaacagtcgcagcggatatataacatacatcttcaaaaaatatacatgtcataaaatcaatatacatcaccatataaa 14967912  T
Q  160 atctctaaagcccgaca 176  Q
    ||||  ||| |||||||    
T  14967913 atcttcaaatcccgaca 14967929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 17320824 - 17320576
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||||||||| ||||||||||| ||||| |||||||| | || |||||| ||||||||||   |||||| |||  |||||||||||| |||    
T  17320824 cgaataatataaatattcaggaaatagacgccacatcatcaacaaaatccaaacaacaggcatatataaaaattctca-cagctgcagcggatatagatc 17320726  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaatt--- 204  Q
    || |||||| ||| | |||||| ||| ||| ||| ||||| || |||| ||| |||| ||| ||||||| ||||||||| |||| | |||||||||        
T  17320725 attcatctctaaagtctacatgccatgagaccaaaatacaacatcataaaaattctccaaatcccgacaaatgggcaaa-tctccacaacataaataaat 17320627  T
Q  205 -caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     ||| |||| |||||| |||||||||||| |||| |||||||||||||||||    
T  17320626 ccaaaataaacaatctagaataatcataa-gacagacatcctagatcagagc 17320576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 31416463 - 31416330
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||||||||||||||||||||| || || |||||||| | || |||||| |||||||| ||  ||||||||||| |||||| ||||||| |    
T  31416463 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaatccaaacaacaggcatatataaaaattctcaacagttgcagcgaatataaacc 31416364  T
Q  109 atacatctccaaatatacatgtcataagatcaat 142  Q
    ||||| ||| || |||| ||| ||| ||||||||    
T  31416363 atacacctcaaagtatatatgccatgagatcaat 31416330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 12950495 - 12950663
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataa 105  Q
    |||| ||||||||||||||||||||||||||||| || ||||  ||||    | | |||||||||| |||||   |||||||||||||||||||||||||    
T  12950495 cgaataatataaatattcaagaaatagacgctacgtcatcaattcaaaaacaaaatcaacatgcatgtataaaaattctcaacagtcgcagcggatataa 12950594  T
Q  106 atcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccga 174  Q
    |||||||  ||| ||| |||||||| ||| ||||||| |||||||| |||||||| |||| ||| |||||    
T  12950595 atcatac-cctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaatcccga 12950663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 255
Target Start/End: Complemental strand, 43429710 - 43429536
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||| |||||||||||||| |||||| ||| ||| |||||||| ||| ||||||| |||||||| |||| ||| |||| ||| ||| ||| |||||    
T  43429710 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcatcataaaaattctccaaatcccaacaaatggg 43429611  T
Q  183 caaaatctcgataac----ataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | ||||||| | |||    |||||| ||  |||| |||||| |||||||| | |||||| |||||||||||||||||    
T  43429610 c-aaatctccacaacataaataaatccagaataaacaatctagaataatc-ttaagacatacatcctagatcagagc 43429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 14820072 - 14819975
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    |||| ||||||||||||||||||||||| | ||| || |||||||| | || | |||||||||| |||||  ||||||||||| ||||||||||||||    
T  14820072 cgaataatataaatattcaagaaatagaagttacgtcatcaacaaagtccagaacaacatgcatgtataaaattctcaacagttgcagcggatataaa 14819975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 20418776 - 20418888
Alignment:
Q  90 gtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaat 188  Q
    ||||||||||||| | | |||||||||||||| ||| ||||||||||  |||  |||||||| || |||||||||| ||| ||||||||||||| | |||    
T  20418776 gtcgcagcggataaataacatacatctccaaaatattcatgtcataaactcataatacatcaccacataaaatctccaaatcccgacatatgggtagaat 20418875  T
Q  189 ctcgataacataa 201  Q
    ||| | |||||||    
T  20418876 ctcaacaacataa 20418888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 18968011 - 18968181
Alignment:
Q  18 ataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatcatacatct 116  Q
    ||||||||||||||||||||||  || || |||||||| |||| | ||||| |||| |||||   |  |||||||||||||||||||||| |||||| ||    
T  18968011 ataaatattcaagaaatagacgtcacgtcatcaacaaaattcaaaacaacacgcatgtataaaaattccaacagtcgcagcggatataaagcatacacct 18968110  T
Q  117 -ccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaa 186  Q
       ||||||||||||||| | ||||| |||  |||| ||| ||| |||| ||| |||||||  ||||||||    
T  18968111 aaaaaatatacatgtcatgatatcaaaatatctcaatataaaaattctccaaatcccgacaagtgggcaaa 18968181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 21168952 - 21168757
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||| |||||||||||||||||  || || |||||||| | || |  |||||| || |||||   ||||||||||| |||||||||||||||    
T  21168952 cgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaataacatgtatgtataaaaattctcaacagttgcagcggatataaat 21168853  T
Q  108 catacatctcca-aatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||||||  || | | |||||||||||| | ||||  |||||||| |||| ||| |||| ||| ||||||| |||||  ||||||| | |||||||||    
T  21168852 catacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaatcccgacaaatggg-taaatctccaaaacataaat 21168757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 293964 - 294010
Alignment:
Q  145 acatcaacatataaaatctctaaagcccgacatatgggcaaaatctc 191  Q
    |||||| ||||||||||||| ||| ||||||||||||| ||||||||    
T  293964 acatcaccatataaaatctccaaatcccgacatatgggtaaaatctc 294010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 182
Target Start/End: Original strand, 41659614 - 41659716
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||||| | |||||||||||||| |||| | ||| ||| ||||||| |||| | ||||| |||||||| |||| ||| |||| ||| ||||||| ||    
T  41659614 ttctcaacaattgcagcggatataaaccataaacctcaaaagtatacatttcatgatatcaaaatacatcatcataaaaattctccaaatcccgacaaat 41659713  T
Q  180 ggg 182  Q
    |||    
T  41659714 ggg 41659716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 38378416 - 38378371
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaa 55  Q
    |||| |||||||||||| |||||||||||| |||||| ||||||||    
T  38378416 cgaataatataaatatttaagaaatagacgttacatcatcaacaaa 38378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 8e-73; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 19624273 - 19624037
Alignment:
Q  18 ataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttc-tcaacagtcgcagcggatataaatcatacat 114  Q
    |||||||||||||||||||||||||| ||||||   |||| |||| |||||||||||||||||  ||| ||||||||||||| |||||||||||||||||    
T  19624273 ataaatattcaagaaatagacgctacgtcttcacatcaaaattcaaacaacatgcatatataaaattcatcaacagtcgcagtggatataaatcatacat 19624174  T
Q  115 ctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataat 213  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||| || |||||||| ||||||||||| || ||||||    
T  19624173 ctccaaaatatacatgtcataagatcaatatacatcatcatataaaatctccaaatcccgacatat-ggtaaaatctccataacataaatccagcataat 19624075  T
Q  214 caatctcgaataatcataaagacaaacatcctagatca 251  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  19624074 caatctagaataatcataaagacagacatcctagatca 19624037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 14569332 - 14569579
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||  ||||||||||||||||||| |||||||||    
T  14569332 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaatt-caaacaacatgcatatataaaatttctcaacagtcgcagcgaatataaatc 14569430  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacat--caacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattc 205  Q
    ||||||||||||| |||||||||||||||  ||||||| ||  || ||||||||||||| ||| ||| |||||||||||||||||| ||||||| ||| |    
T  14569431 atacatctccaaaatatacatgtcataagtccaatatatatatcatcatataaaatctccaaatccc-acatatgggcaaaatctcaataacatgaatcc 14569529  T
Q  206 aacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | |||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  14569530 agcataatcaatctagaacaatcataaagacaaacatcctagattagagc 14569579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 17378427 - 17378196
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat--tttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    ||||||||||||||| | | ||| |||||||||||| ||  ||| |||||||||| ||   ||  |||| ||||||||||||||||||||||||||||||    
T  17378427 aatattcaagaaataaatgttacgtcttcaacaaatatcgaacatcatgcatatacaaaaattcatcaatagtcgcagcggatataaatcatacatctcc 17378328  T
Q  119 aaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaat 217  Q
    ||| ||||||||||||||||||||||||||||||||||  ||||||| ||  || |||| ||| |||||||||| | |||||||||||| ||||||||||    
T  17378327 aaaatatacatgtcataagatcaatatacatcaacata--aaatctccaagtcctgacacatgagcaaaatctcaacaacataaattcagcataatcaat 17378230  T
Q  218 ctcgaataatcataaagacaaacatcctagatca 251  Q
    || ||||||||||||||||| |||||||||||||    
T  17378229 ctagaataatcataaagacagacatcctagatca 17378196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 41919495 - 41919246
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatca 109  Q
    |||| ||||||||||||||||||||||| ||||| || |||||||| | || |||||| ||||||||||  ||||||| ||| |||| ||||||| ||||    
T  41919495 cgaataatataaatattcaagaaatagatgctacgtcatcaacaaaatccaaacaacaggcatatataaaattctcaaaagttgcagtggatatagatca 41919396  T
Q  110 tacatctcc-aaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaatt 204  Q
    ||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||  ||| ||||||| |||||| |||| || | |||    ||||||     
T  41919395 tacatctccaaaatatagatgtcataagatcaatatacatcatcatataaaatcttaaaatcccgacaaatgggc-aaatatccacaacataaataaatc 41919297  T
Q  205 caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||  |||| |||||| ||||||||||||||||| ||||| |||||||||||    
T  41919296 cagaataaacaatctagaataatcataaagacatacatcttagatcagagc 41919246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 5373351 - 5373175
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcataca-acatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    |||||||| ||| ||||||||| |||||||||||   || ||| ||||||||||||||   |||||||| ||||||||||||||||||||||| ||||||    
T  5373351 atattcaaaaaacagacgctacgtcttcaacaaaac-caaacatacatgcatatataaaaattctcaacggtcgcagcggatataaatcatacttctcca 5373253  T
Q  120 aa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    || |||||||||||| ||||||| |||||||| |||||||| |||| ||| ||| ||||||||| |||||||| ||||    
T  5373252 aaatatacatgtcatgagatcaaaatacatcatcatataaattctccaaatcccaacatatgggtaaaatctccataa 5373175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 47470582 - 47470331
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||| || || ||||||||   || | ||||||||||||||||   ||||||||||||||||||||||||||     
T  47470582 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaaccaaatcaacatgcatatataaaaattctcaacagtcgcagcggatataaac 47470483  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaa-tctctaaagcccgacatatgggcaaaatctcgataacataaat-- 203  Q
    |||||| ||| ||| |||||||||||| | ||||| |||||||| |||| |||| |||| ||| | ||||| ||||| |||||||| | |||||||||      
T  47470482 catacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaaaattctccaaatctcgacaaatggg-aaaatctccacaacataaataa 47470384  T
Q  204 -tcaaca-taatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     || | | ||| |||||| |||||||||| |||||| |||||||||||||||||    
T  47470383 atccagagtaaacaatctagaataatcat-aagacagacatcctagatcagagc 47470331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 201
Target Start/End: Complemental strand, 19083178 - 19082993
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataattttc-tcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||||| || ||||||||||| | ||||| | ||||||||| |||||||  ||| |||| | ||||||| |||||| | ||||||||||    
T  19083178 aaatattcaagaaataggcgttacatcttcaaaatatttcgaaacaacatgcctatataaaattcctcaaaaatcgcagcagatatataacatacatctc 19083079  T
Q  118 caaa--tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataa 201  Q
     |||  |||||||||||| | ||||| |||||||| ||||||||||||| ||| ||||||||||| | |||||||| | |||||||    
T  19083078 aaaaaatatacatgtcatgaaatcaacatacatcaccatataaaatctccaaatcccgacatatgcgtaaaatctcaacaacataa 19082993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 242
Target Start/End: Complemental strand, 13596261 - 13596030
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacat 114  Q
    ||||||||||||||||||| |||||||| || |||||||| | || |||||| |||||||| ||  || |||||||| ||| |||||||| |||||||||    
T  13596261 atataaatattcaagaaatcgacgctacgtcatcaacaaaatccaaacaacaggcatatataaaaattttcaacagttgcatcggatatagatcatacat 13596162  T
Q  115 ctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaaca 209  Q
    ||||||| | |||||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||| | |||||| ||||||| | |||    |||||| ||  |    
T  13596161 ctccaaagtctacatgccatgagatcaaaatacaacatcataaaaattctccaaatcccgataaatgggc-aaatctccacaacataaataaatccagaa 13596063  T
Q  210 taatcaatctcgaataatcataaagacaaacat 242  Q
    ||| |||||| ||||||||||||||||| ||||    
T  13596062 taaacaatctagaataatcataaagacagacat 13596030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 12136514 - 12136342
Alignment:
Q  27 caagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacatctccaaa-ta 123  Q
    ||||||||||||||||| ||||||  |||  || | ||||||||||||||| ||  | |||||||||||||  | |||||||||||||||||||||| ||    
T  12136514 caagaaatagacgctacgtcttcattaaaaatcaaaacaacatgcatatataaaagtcctcaacagtcgcaatgtatataaatcatacatctccaaagta 12136415  T
Q  124 tacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||||||||| ||||||| |||||||| |||||||| |||| ||   ||||||| |||| |||||||| ||||    
T  12136414 tacatgtcatgagatcaaaatacatcatcatataaattctccaagtaccgacatgtgggtaaaatctcaataa 12136342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 50224331 - 50224156
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||||||| ||||||||||||||  ||||| ||| ||| |||||||  ||| ||||||| ||||||||||||| ||| |||| ||| ||||||| ||    
T  50224331 ttctcaacagttgcagcggatataaacaatacacctcaaaagtatacataccatgagatcaaaatacatcaacataaaaattctccaaatcccgacaaat 50224232  T
Q  180 gggcaaaatctcgataac----ataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcaga 253  Q
    || | ||||||| | |||    |||||||||  |||| |||||| |||||||||| ||||||||||||||||||||||    
T  50224231 ggac-aaatctccacaacataaataaattcagaataaacaatctagaataatcat-aagacaaacatcctagatcaga 50224156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 254
Target Start/End: Complemental strand, 54366172 - 54366076
Alignment:
Q  158 aaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagag 254  Q
    ||||||| ||| |||||||||||||||||||| | |||| | |||| || ||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  54366172 aaatctccaaaacccgacatatgggcaaaatccccataatacaaatccagcataaacaatctagaataatcataaagacatacatcctagatcagag 54366076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 5407103 - 5407239
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatac 112  Q
    |||||||||||||||| ||||||||| || ||||||| ||| | || | |||||||||| ||||| | ||||||||||| |||||||||||||| |||||    
T  5407103 aatataaatattcaagtaatagacgccacgtcttcaataaaatccaaaacaacatgcatgtataaatattctcaacagttgcagcggatataaaccatac 5407202  T
Q  113 atctccaaatatacatgtcataagatcaatatacatca 150  Q
    | ||| || |||||||| ||| ||||||| ||||||||    
T  5407203 acctcaaagtatacatgccatgagatcaa-atacatca 5407239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 19557264 - 19557413
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatcatacat 114  Q
    |||||||||||||||||||||||||| |  || |||||||| |  | |||||| ||||| ||||  ||||||||| | |||||||||||||| ||||||     
T  19557264 aatataaatattcaagaaatagacgccatgtcatcaacaaaatctaaacaacaggcatacataaaattctcaacaattgcagcggatataaaccatacac 19557363  T
Q  115 ctccaaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    ||| || ||||||||  || ||||||| |||||||| |||| ||| ||||    
T  19557364 ctcaaagtatacatgctatgagatcaaaatacatcatcataaaaattctc 19557413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 10239688 - 10239439
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||| |||||||||||||| ||||| |||||||  |||| | |||| ||||||||||   ||||  || || |||||||||||||| |    
T  10239688 cgaataatataaatatccaagaaatagacgccacatcatcaacaatgttcaaataacaagcatatataaaaattctataccgttgcagcggatataaacc 10239589  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaat 203  Q
    |||||  || ||| |||||||| ||| || |||| ||||||||||||| ||| |||  |||  |||||| || ||  ||||||| | |||    ||||||    
T  10239588 atacacttcaaaagtatacatgccatgaggtcaaaatacatcaacataaaaattcttcaaattccgaca-attgggtaaatctccacaacacaaataaat 10239490  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     ||| |||| |||||| |||||||||| |||||| |||||||||||||||||    
T  10239489 ccaaaataaacaatctagaataatcat-aagacatacatcctagatcagagc 10239439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 18241430 - 18241332
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||| ||||||||||||||||||||| |||||||| |  | | |||||||||| |||||   ||||||||||| |||||||||||||||||||    
T  18241430 aatataaatagtcaagaaatagacgctacatcatcaacaaaatcgaaaacaacatgcatgtataaaaattctcaacagttgcagcggatataaatcata 18241332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 54366284 - 54366187
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctc 117  Q
    |||||||||||||||||||||| |||||||||||    | | ||||||||||||||||   ||||||||||||| |||||||||| ||||||||||||    
T  54366284 atattcaagaaatagacgctacgtcttcaacaaaaacaaaatcaacatgcatatataaaaattctcaacagtcgtagcggatatagatcatacatctc 54366187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 12729333 - 12729428
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatat-aattttctcaacagtcgcagcggatat 103  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||    | | |||||||||||||| ||  |||||||||||||||||||||||    
T  12729333 cgaataatataaatatttaagaaatagacgctacgtcttcaacaaaaacaaaatcaacatgcatatataaaaattctcaacagtcgcagcggatat 12729428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 201
Target Start/End: Complemental strand, 17194622 - 17194501
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||||||||| ||||||||||||||||||||| | ||| ||||||||| ||||  || | ||| ||||| | ||| |||||| |||  |||||| ||    
T  17194622 ttctcaacagtcgtagcggatataaatcatacatcactaaagtatacatgttataaactccaaatatatcaatacatagaatctccaaaatccgacaaat 17194523  T
Q  180 gggcaaaatctcgataacataa 201  Q
    |  ||||||||| |||||||||    
T  17194522 gaacaaaatctccataacataa 17194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 24237038 - 24237084
Alignment:
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  24237038 ataatcaatctagaataatcatacagacagacatcctagatcagagc 24237084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 13449250 - 13449129
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||  || || |||||||| | || | |||||||||| |||||   ||||||||||| ||||||||||||||  ||||| |||     
T  13449250 aatattcaagaaatagacgtcacgtcatcaacaaaatccaaaacaacatgcatgtataaaaattctcaacagttgcagcggatataaactatacacctca 13449151  T
Q  119 aaa-tatacatgtcataagatc 139  Q
    ||| |||||||||||| |||||    
T  13449150 aaagtatacatgtcatgagatc 13449129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 15216278 - 15216238
Alignment:
Q  215 aatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  15216278 aatctagaataatcataaagacagacatcctagatcagagc 15216238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 24236879 - 24236974
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttct-caacagtcgcagcggatataaatcatacatc 115  Q
    |||||||||||||||||||||  |||||   | ||  ||| |||||||||||||||||  || | ||||||||||||||||||||| |||||||||    
T  24236879 tattcaagaaatagacgctacgccttcacatccaaaatcaaacaacatgcatatataaaattattcaacagtcgcagcggatataagtcatacatc 24236974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 248044 - 247797
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||  ||||||||||||||||||| |||||||||    
T  248044 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaatt-caaacaacatgcatatataaaatttctcaacagtcgcagcgaatataaatc 247946  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacat--caacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattc 205  Q
    ||||||||||||| |||||||||||||||  ||||||| ||  || ||||||||||||| ||| ||| |||||||||||||||||| ||||||| ||| |    
T  247945 atacatctccaaaatatacatgtcataagtccaatatatatatcatcatataaaatctccaaatccc-acatatgggcaaaatctcaataacatgaatcc 247847  T
Q  206 aacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | |||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  247846 agcataatcaatctagaacaatcataaagacaaacatcctagattagagc 247797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 203
Target Start/End: Original strand, 12245631 - 12245813
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaaa 121  Q
    ||||||| ||||||||| ||| |||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  12245631 tattcaataaatagacgttacgtcttcaacaaatatcaaacaacatgcatatataaaatttctcaacagtcgcagcggatataaatcatacatctccaaa 12245730  T
Q  122 -tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  12245731 atatacatgtcataagatcaatatacatcatcatataaaatctccaaatcccgacatatgggcaaaatctccataacataaat 12245813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 17948273 - 17948024
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||| ||  ||||||||||| ||||||||||||||||    
T  17948273 cgaataatataaatattcaagaaatagacgctacatcatcaacaaaatccaaacaacatgcatatataaaaattctcaacagttgcagcggatataaatc 17948174  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaat 203  Q
    ||||| ||| ||| |||||||| ||| ||||||| |||||||| |||| ||| |||| ||| ||||||| |||||| ||||||| | |||    ||||||    
T  17948173 atacacctcaaaagtatacatgacatgagatcaaaatacatcatcataaaaattctccaaatcccgacaaatgggc-aaatctcaacaacataaataaat 17948075  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     ||  |||| |||||| |||||||||| |||||| |||||||||||||||||    
T  17948074 ccagaataaacaatctagaataatcat-aagacagacatcctagatcagagc 17948024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 39294400 - 39294150
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||||||||||| ||| ||| |||  ||| | ||||||||||||||||   |||||||||||||||||||||||||||    
T  39294400 cgaataatataaatattcaagaaatagacgctacgtctacaataaaaatcaaatcaacatgcatatataaaaattctcaacagtcgcagcggatataaat 39294301  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgata--acataaatt 204  Q
    ||||||| |||||| |||||||| ||| ||||||| |||||||| |||||||| |||  ||   |||||||||||| |||||||| |||  | ||||||     
T  39294300 catacatatccaaagtatacatgccatgagatcaaaatacatcatcatataaattcttcaagtaccgacatatgggtaaaatctcaataataaataaatc 39294201  T
Q  205 caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || || || |||||| ||||||||||||||| |  ||||||||||||||||    
T  39294200 cagcaaaaccaatctagaataatcataaagataggcatcctagatcagagc 39294150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 15980746 - 15980566
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatt-tcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||||||||| |||| ||||||   ||| | |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
T  15980746 tattcaagaaatagacgctacgtcttgaacaaaacatcaaa-aacatgcatatataaaatttctcaacagtcgcagcggatataaatcatacatctcaaa 15980648  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    |||||||||||| |||| ||||||||||| |||||||||||||  ||| ||||||||||||| |||||||| | |||||||||    
T  15980647 atatacatgtca-aagaacaatatacatcgacatataaaatcttcaaatcccgacatatgggtaaaatctccacaacataaat 15980566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 3194267 - 3194072
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||| |||||||||| ||||||||||||| | |||||||||| ||| ||||||||||| |||||   ||||||||||||||| | ||||||||||    
T  3194267 cgaataatacaaatattcaaaaaatagacgctacgttttcaacaaatatcaaacaacatgcatttataaaaattctcaacagtcgcaccagatataaatc 3194168  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||| ||| ||||  |||||||||||||||||||| ||||||| | | |||||||||| ||| ||||||| ||| |  ||||||| |||||||||||    
T  3194167 atatatcaccaatgtatacatgtcataagatcaacatacatccataaataaaatctccaaaacccgacaaatgagtgaaatctccataacataaat 3194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 18081545 - 18081358
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatca 109  Q
    |||| |||||||||||||||||||| ||| |||| || |||||||| | || |||||||| ||||||||  ||||||| ||| |||||||||||| ||||    
T  18081545 cgaataatataaatattcaagaaattgactctacgtcatcaacaaaatccaaacaacatgtatatataaaattctcaatagttgcagcggatatagatca 18081446  T
Q  110 tacatctcc-aaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||||||||| |  | |||||| ||| ||||||| ||||| || |||||||| |||| ||| ||||||||| ||| |||||||| ||||    
T  18081445 tacatctcctaggtctacatgccatgagatcaaaatacaacatcatataaattctccaaatcccgacataagggtaaaatctcaataa 18081358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 255
Target Start/End: Complemental strand, 4073182 - 4072991
Alignment:
Q  61 tacaacatgcatatataattttctcaacagtcgcagcggatataaatcatacatc-tccaaatatacatgtcataagatcaatatacatcaacatataaa 159  Q
    |||||||| |||||| ||  |||||||| |||||| ||||||||| ||||| ||| || ||||||| ||| ||||| || ||||||||||| ||||||||    
T  4073182 tacaacatacatatacaaaattctcaacggtcgca-cggatataagtcatatatcatcaaaatatatatggcataaaattaatatacatcatcatataaa 4073084  T
Q  160 atctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||| ||| ||||| ||||||| || |||||   ||||||||| || ||||  ||||||  |||||||||||||||| |||||||||||||||||    
T  4073083 atctccaaatcccgatatatgggtaatatctc---aacataaatccagcatagacaatctaaaataatcataaagacatacatcctagatcagagc 4072991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 17922988 - 17923101
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||| |||||||| |||| ||| || ||||||||||    
T  17922988 tcaacagtcgcagcggatataaatcatacatctctaaagtatacatgtcatgagatcaaaatacatcatcatataaattctccaaatcctgacatatggg 17923087  T
Q  183 caaaatctcgataa 196  Q
     |||||||| ||||    
T  17923088 taaaatctcaataa 17923101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 242
Target Start/End: Original strand, 9640984 - 9641215
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacat 114  Q
    ||||||||||||||||||| |||||||| || |||||||| | || |||||| |||||||| ||  || |||||||| ||| |||||||| |||||||||    
T  9640984 atataaatattcaagaaatcgacgctacgtcatcaacaaaatccaaacaacaggcatatataaaaattttcaacagttgcatcggatatagatcatacat 9641083  T
Q  115 ctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaaca 209  Q
    ||||||| | |||||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||| | |||||| ||||||| | |||    |||||| ||  |    
T  9641084 ctccaaagtctacatgccatgagatcaaaatacaacatcataaaaattctccaaatcccgataaatgggc-aaatctccacaacataaataaatccagaa 9641182  T
Q  210 taatcaatctcgaataatcataaagacaaacat 242  Q
    ||| |||||| ||||||||||||||||| ||||    
T  9641183 taaacaatctagaataatcataaagacagacat 9641215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 81 - 164
Target Start/End: Original strand, 13460367 - 13460450
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || |||| || | | ||||||||||    
T  13460367 ttctcaacagtcgcagcggatataaatcatacatcaccaagtatacatgtcataagattaacatacgtccataaataaaatctc 13460450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 4436818 - 4436947
Alignment:
Q  17 tataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-----ttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||||||||||| ||  ||||||| |||| |||||| |||||||||| |     ||||||||||| ||| | |||||||| ||||    
T  4436818 tataaatattcaagaaatagacgctacgtcaacaacaaaattcaaacaacaagcatatataaataataattctcaacagttgcaacagatataaaccata 4436917  T
Q  112 catctc-caaatatacatgtcataagatca 140  Q
    || ||| |||||||||||| ||||||||||    
T  4436918 cacctcacaaatatacatgccataagatca 4436947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 196
Target Start/End: Original strand, 17926825 - 17926938
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||||||||| |||||| |||||||||||| ||| |||| ||||||| ||||||| |||||| | |||||||| ||||| || |||||||||||||    
T  17926825 tcaacagtcgcagcagatatacatcatacatctctaaagtatatatgtcatgagatcaaaatacattatcatataaattctctgaatcccgacatatggg 17926924  T
Q  183 caaaatctcgataa 196  Q
     ||| |||| ||||    
T  17926925 taaattctcaataa 17926938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 21677743 - 21677589
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||||||||||||||||||||| ||  | |||||||| | || | | || ||||||||||   ||||||||||| |||||||||||||| |    
T  21677743 cgaataatataaatattcaagaaatagacgccacgccatcaacaaaatccaaatatcaggcatatataagaattctcaacagttgcagcggatataaacc 21677644  T
Q  109 atacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    ||||| ||| || |||||||| ||| ||||||| |||||||| |||| ||| ||||    
T  21677643 atacacctcaaagtatacatgccatgagatcaa-atacatcatcatagaaattctc 21677589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 28717977 - 28718159
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||||||||||| |  |  || ||||| | || | |||||||||| |||||   |||||||||||||||| ||||||||| ||||||    
T  28717977 atataaatattcaagaaatagacgccatgttatcgacaaaatccaaaacaacatgcatttataaaaattctcaacagtcgcagtggatataaaccataca 28718076  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
     ||||||| ||||||||||||||  |||| ||| ||||| | || ||||||| ||| ||| ||||| |||||||||||| ||||    
T  28718077 cctccaaagtatacatgtcataacttcaa-atatatcaatacatgaaatctccaaaacccaacataagggcaaaatctccataa 28718159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 140
Target Start/End: Original strand, 4444212 - 4444348
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-----ttctcaacagtcgcagcggatata 104  Q
    |||| ||||||||||||||||||||||||||||| ||  ||||||| |||| ||| || |||||||||| |     ||||||||||| ||||| ||||||    
T  4444212 cgaataatataaatattcaagaaatagacgctacgtcaacaacaaaattcaaacagcaagcatatataaataataattctcaacagttgcagcagatata 4444311  T
Q  105 aatcatacatctc-caaatatacatgtcataagatca 140  Q
    ||  ||||| ||| |||||||||||| ||||| ||||    
T  4444312 aacgatacacctcacaaatatacatgccataatatca 4444348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 13452260 - 13452327
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaatatacatgtcataagatcaatatacat 148  Q
    ||||||||||||||||||||||||||| || |||| |||| ||||||||||||||||| || ||||||    
T  13452260 ttctcaacagtcgcagcggatataaataatgcatcaccaagtatacatgtcataagattaacatacat 13452327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 18921240 - 18921166
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacata 155  Q
    |||||||||||||||||||||||||| |||||| ||| ||| |||||||||||| ||||||| |||||||||||||    
T  18921240 ttctcaacagtcgcagcggatataaaccatacacctcaaaattatacatgtcatgagatcaa-atacatcaacata 18921166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 255
Target Start/End: Complemental strand, 9323230 - 9323056
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||| |||||||||||||| |||||| ||| ||| |||||||| ||| ||||||| ||||||||||||| ||| | |  ||| ||||||| |||||    
T  9323230 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgccatgagatcaaaatacatcaacataaaaattattcaaatcccgacaaatggg 9323131  T
Q  183 caaaatctcgataacataaat---tcaac-ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     |||||||| | |||||||||   || || ||||  ||||| |||||||||| ||||||||||||||| | ||||||    
T  9323130 -aaaatctccacaacataaataaatccacaataaaaaatctagaataatcat-aagacaaacatcctaaagcagagc 9323056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 187
Target Start/End: Original strand, 15305423 - 15305548
Alignment:
Q  64 aacatgcatatataattttctcaacagtcgcagcggatataaatcatacatctcc-aaatatacatgtcataagatca-atatacatcaacatataaaat 161  Q
    |||||||||||| || || ||||| | |||||||||||||| | ||||||||||| |||||||||| | |||| |||| | |||| ||| ||||||||||    
T  15305423 aacatgcatataaaaattcctcaaaaatcgcagcggatatataacatacatctccaaaatatacattttataaaatcatacatacgtcaccatataaaat 15305522  T
Q  162 ctctaaagcccgacatatgggcaaaa 187  Q
    ||| |||  |||||||||||| ||||    
T  15305523 ctccaaattccgacatatgggtaaaa 15305548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 31499246 - 31499342
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgaca 176  Q
    |||| |||||||||||||||||||||||||||| ||| ||| ||| |||||||| | ||||| ||| ||||||||| ||| |||| ||| |||||||    
T  31499246 ttcttaacagtcgcagcggatataaatcatacacctcaaaagtatgcatgtcatgatatcaaaatatatcaacataaaaattctcaaaatcccgaca 31499342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 111
Target Start/End: Complemental strand, 9058867 - 9058764
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttca-acaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||| ||||| |||||||||||||||| |||||| ||||| | || | |||||||||| |||||  ||||||||||||||| ||||||||||     
T  9058867 cgaataatatatatatttaagaaatagacgctacgtcttcatacaaaatccaaaacaacatgcatgtataaaattctcaacagtcgcatcggatataaac 9058768  T
Q  108 cata 111  Q
    ||||    
T  9058767 cata 9058764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 203
Target Start/End: Original strand, 12182217 - 12182352
Alignment:
Q  70 catatataattttctcaacagtcgcagcggatataaatcatacatctcc-aaatatacatgtcataagatc-aatatacatcaacatataaaatctctaa 167  Q
    ||||||||| |||||||| | |||||| ||||||| | ||||||||||| ||||||||||||||| |  || || |||||||| ||||||||||||| ||    
T  12182217 catatataaatttctcaaaaatcgcagaggatatataacatacatctccaaaatatacatgtcatcaactcaaacatacatcaccatataaaatctccaa 12182316  T
Q  168 agcccgacatatgggcaaaatctcgataacataaat 203  Q
      |||||||  || | |||||||| | |||||||||    
T  12182317 ttcccgacaagtgagtaaaatctcaacaacataaat 12182352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 9609182 - 9609274
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa-caaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||| ||||| |||| |||| | || |  |||||||||| ||||| | ||||||||||||||||||||||||| ||||    
T  9609182 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatatctcaacagtcgcagcggatataaaccata 9609274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 9836754 - 9836846
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa-caaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||| ||||| |||| |||| | || |  |||||||||| ||||| | ||||||||||||||||||||||||| ||||    
T  9836754 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatatctcaacagtcgcagcggatataaaccata 9836846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 4482194 - 4482439
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||| |||||||||| ||||| |||||||| | | | ||||||||||| ||| ||   | |||||||| ||||||||||||||     
T  4482194 cgaataatataaatattcaaaaaatagacgccacatcatcaacaaaatccaaaacaacatgcatgtataaaaaatttcaacagttgcagcggatataaac 4482293  T
Q  108 cataca-tctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgata---acataaat 203  Q
    |||| | | |  ||  ||||||| ||| | ||||| ||||| || |||| ||  |||| ||| ||||||| |||||| ||||||| | |   | ||||||    
T  4482294 catatactttaaaagcatacatgccatgaaatcaagatacaacatcataaaagttctccaaatcccgacaaatgggc-aaatctccacatgtaaataaat 4482392  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatca 251  Q
     ||| |||| |||||| |||||||||| |||||| |||||||||||||    
T  4482393 ccaaaataaacaatctagaataatcat-aagacagacatcctagatca 4482439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 5617394 - 5617481
Alignment:
Q  22 atattcaagaaatagacgctacatcttc-aacaaatttc--atacaacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    ||||||||||||||||||||||||| || |||||| |||  || ||||||||||  ||||   |||||||||||||| ||||||||||    
T  5617394 atattcaagaaatagacgctacatcatcaaacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcaacggatataaa 5617481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 16381839 - 16381979
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatata-taattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||||||| |||||||||| |  || |  |||||||| | || |||||| |||||||  || ||| |||||||| |||| ||||||||| |    
T  16381839 cgaataatataaatatttaagaaatagatgtcacgttatcaacaaaatccaaacaacaggcatatagaaaatttttcaacagttgcagtggatataaacc 16381938  T
Q  109 atacatctccaaatatacatgtcataagatcaatatacatc 149  Q
    |||||  || || |||||||| ||| ||||||| |||||||    
T  16381939 atacacttcaaagtatacatgccatgagatcaaaatacatc 16381979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 12250258 - 12250207
Alignment:
Q  82 tctcaacagtcgcagcggatataaatcatacatctccaaatatacatgtcat 133  Q
    ||||||||||||||||||||||||| || |   |||||||||||||||||||    
T  12250258 tctcaacagtcgcagcggatataaaccagagtactccaaatatacatgtcat 12250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 48345526 - 48345617
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa-caaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||||||  | |||| |||| | || | |||||||||| |||||   ||||||||||||||||||||||||| ||||    
T  48345526 atattcaagaaatagacgctacgccatcaaacaaaatccaaaacaacatgcatgtataaaaatctcaacagtcgcagcggatataaaccata 48345617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 11765945 - 11765712
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaaa 121  Q
    ||||||||||||||||| ||| |||||||||||   |  |||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||    
T  11765945 tattcaagaaatagacgttacgtcttcaacaaaacaccaacaacatgcatatataaaatttctcaatagtcgcagcggatataaatcatacatctccaaa 11765846  T
Q  122 -tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctc 220  Q
     |||||||| || |||| ||| |||||||| ||||||||||||| ||| || ||||||||||||||||||| | ||||||||| || || || ||||||     
T  11765845 atatacatgacaaaagaacaaaatacatcatcatataaaatctcaaaatcc-gacatatgggcaaaatctcaacaacataaatccagcaaaagcaatcta 11765747  T
Q  221 gaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||||||||||||| |||||||||||||||||    
T  11765746 gaataatcataaagacagacatcctagatcagagc 11765712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 15 - 201
Target Start/End: Original strand, 37985772 - 37985960
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataa-ttttctcaacagtcgcagcggatataaatcataca 113  Q
    |||| |||||||||||||||||||||| | ||||||| | |||| | ||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  37985772 aatacaaatattcaagaaatagacgctgcgtcttcaatagattttaaacaacatgcatatataaattttctcaacagtcgcatcagatataaatcataca 37985871  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataa 201  Q
    |||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| ||||||||||||| |||||||| | |||||||    
T  37985872 tctccaaaatatacatgtcataagatcaacatacatcgacatataaaatctccaaatcccgacatatgggaaaaatctcaagaacataa 37985960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 14345916 - 14345671
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| | ||  ||| |  ||||||| ||| |||||||||||| |||| ||||||||||    
T  14345916 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaaatccaaccaatagacatatataaatattctcaacagtcacagcagatataaatc 14345817  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgata--acataaattc 205  Q
    ||||||||||||| |||||||||||| ||||||| |||||||| |||||||| |||  ||  ||||||||||||| |||||||| |||  | |||||| |    
T  14345816 atacatctccaaagtatacatgtcatgagatcaaaatacatcatcatataaattcttcaagtcccgacatatgggtaaaatctcaataataaataaatcc 14345717  T
Q  206 aacataatcaatctcgaataatcataaagacaaacatcctagatca 251  Q
    | || || |||||| ||||||||||||||||| |||||||||||||    
T  14345716 agcaaaaccaatctagaataatcataaagacagacatcctagatca 14345671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 11963575 - 11963700
Alignment:
Q  63 caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaa 160  Q
    ||||||||||||||||   ||||||| ||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||    
T  11963575 caacatgcatatataaaaattctcaatagtcgcagcggatataaatcatacatctcaaaaatataaatgtcataagatcaatatacatcatcatataaaa 11963674  T
Q  161 tctctaaagcccgacatatgggcaaa 186  Q
    |||| ||| || |||| |||||||||    
T  11963675 tctccaaatcctgacaaatgggcaaa 11963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 20456754 - 20456621
Alignment:
Q  65 acatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatc 162  Q
    ||||||||||||||   |||||||||||| |||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| |||||||| ||    
T  20456754 acatgcatatataaaaattctcaacagtcacagcggatataaatcatacatctccaaaatatacatgccatgagatcaaaatacatcatcatataaattc 20456655  T
Q  163 tctaaagcccgacatatgggcaaaatctcgataa 196  Q
    || ||| ||||||||||||| |||||||| ||||    
T  20456654 tccaaatcccgacatatgggtaaaatctccataa 20456621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 23236651 - 23236407
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcataca 113  Q
    |||||||||||||||||||||||||  || || |||||||| | || ||||||  |||||||||   ||||||||||| |||||||||||||||||||||    
T  23236651 aatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaacaacagacatatataaaaattctcaacagttgcagcggatataaatcataca 23236552  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaac 208  Q
     ||| ||| |||||||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||||| |||||  ||||||| | |||    |||||| |||     
T  23236551 cctcaaaagtatacatgccatgagatcaaaatacaacatcataaaaattctccaaatcccgacaaatggg-taaatctccacaacataaataaatccaag 23236453  T
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||| |||||| |||||||||| |||||| |||||||||||||||||    
T  23236452 ataaacaatctagaataatcat-aagacagacatcctagatcagagc 23236407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 19871845 - 19872089
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||||||||||||||| || |||||||| | || |||||| |||||||| ||  ||||||| ||| ||||| |||| | ||||||||    
T  19871845 aatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaacaacaggcatatataaaaattctcaatagttgcagcagatacagatcataca 19871944  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat---tc-aac 208  Q
    |||||||| | |||||||||| ||||||| ||||| || |||| ||| |||| ||| ||||||| ||| || ||||||| | |||||||||   || ||     
T  19871945 tctccaaagtctacatgtcatgagatcaaaatacaacatcata-aaattctccaaatcccgacaaatgagc-aaatctccacaacataaataaatcaaaa 19872042  T
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||| |||| | ||||||||||||||||| ||||| |||||||||||    
T  19872043 ataaacaatatagaataatcataaagacagacatcgtagatcagagc 19872089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 16837981 - 16837793
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||    |   |||||||||||||||   ||||||| ||||||||||||||||||||    
T  16837981 cgaataatataaatattcaagaaatagacgctaggtcttcaacaaaacaaaattaacatgcatatataaaaattctcaatagtcgcagcggatataaatc 16837882  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
     |||||||||||| | |||||| |||||||| || ||||| || |||||||| |||| ||| |||||| ||||||  ||||||| ||||    
T  16837881 ttacatctccaaagtctacatgccataagataaaaatacaacatcatataaattctccaaatcccgacttatgggttaaatctcaataa 16837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 37483238 - 37483080
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttc-tcaacagtcgcagcggatataaa 106  Q
    |||| ||||||||||||||| ||||| ||||||| ||||||   |||| |||| |||||||||||||||||  ||| ||||||||||||||||||||||     
T  37483238 cgaataatataaatattcaataaataaacgctacgtcttcacatcaaaattcaaacaacatgcatatataaaattcatcaacagtcgcagcggatataag 37483139  T
Q  107 tcatacatctc-caaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    |||||||||||  |||||||||||| |||||| ||  ||||||| | | ||||||||||    
T  37483138 tcatacatctcaaaaatatacatgttataagaacagcatacatccatagataaaatctc 37483080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 255
Target Start/End: Complemental strand, 33628369 - 33628272
Alignment:
Q  158 aaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||| |||||||||||||| ||||||||||| |||| | |||| || ||||| |||||| ||||||||||||||||| ||||| |||||||||||    
T  33628369 aaatctccaaagcccgacatataggcaaaatctccataatacaaatccagcataaacaatctagaataatcataaagacagacatcttagatcagagc 33628272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 23411986 - 23412101
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||| ||||||| || |||||||||||||||||||||| |||||||| ||| ||||||| |||||||| |||||||| |||| ||| || |||||||    
T  23411986 ttctcaatagtcgcaccgaatataaatcatacatctccaaagtatacatgccatgagatcaa-atacatcatcatataaattctccaaatcctgacatat 23412084  T
Q  180 gggcaaaatctcgataa 196  Q
     || |||||||| ||||    
T  23412085 tggtaaaatctcaataa 23412101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 186
Target Start/End: Original strand, 29911973 - 29912152
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgca--tatataattttctcaacagtcgcagcggatataaa 106  Q
    |||| |||||||||||||||||||||||||  ||||| |||||||| | | | ||||||||||  |||| || |||| ||||||||||||| |||| |||    
T  29911973 cgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccgaaacaacatgcatgtataaaaatttc-caacagtcgcagcagataaaaa 29912071  T
Q  107 tcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaa 186  Q
    ||||||||||| ||| |||||||| ||| | ||||| | |  |||| ||| ||| |||| ||| |||||||  ||||||||    
T  29912072 tcatacatctcaaaagtatacatgccatgatatcaaaaaatctcaatataaaaattctccaaatcccgacaagtgggcaaa 29912152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 3421079 - 3420936
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||  || || |||||||| | || |  || |||||| |||||   ||||||||| ||||||| |||||||||    
T  3421079 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaataagatgcatgtataaaaattctcaacaatcgcagcagatataaat 3420980  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatca 150  Q
    |||||| ||| ||| |||||||||||| | ||||| ||||||||    
T  3420979 catacacctcaaaagtatacatgtcatgatatcaaaatacatca 3420936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 26562033 - 26561930
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||   |  || ||||||||   || | |||||||||| |||||  ||||||||||||||||||||||||||||    
T  26562033 cgaataatataaatattcaagaaatagacatcatgtcctcaacaaaaaccaaatcaacatgcatgtataaaattctcaacagtcgcagcggatataaatc 26561934  T
Q  109 atac 112  Q
    ||||    
T  26561933 atac 26561930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 5623665 - 5623470
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||| |||||||||||||||||  || || |||||||| | || |  |||||| || |||||   ||||||||||| |||||||||||||||    
T  5623665 cgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaataacatgtatgtataaaaattctcaacagttgcagcggatataaat 5623566  T
Q  108 catacatctcca-aatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||||||  || | | |||||||||||| | ||||  |||||||| |||| ||| |||| ||| ||||||| |||||  ||||||| | |||||||||    
T  5623565 catacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaaattctccaaatcccgacaaatggg-taaatctccaaaacataaat 5623470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 33628442 - 33628386
Alignment:
Q  65 acatgcatatataattttctcaacagtcgcagcggatataaatcatacatctccaaa 121  Q
    ||||||||||||||  | ||||||| ||||||||||||||||||| |||||||||||    
T  33628442 acatgcatatataaaatcctcaacactcgcagcggatataaatcagacatctccaaa 33628386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 22879831 - 22879931
Alignment:
Q  18 ataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataattttctcaacagtcgcagcggatataaatcatacatct 116  Q
    ||||||||||||||||||||||| || || |  ||||| | || |  ||||||||| |||||  |||| ||||||||||||||||| | |||||||||||    
T  22879831 ataaatattcaagaaatagacgccacgtcattcacaaaatccaaaataacatgcatgtataaaattcttaacagtcgcagcggataaagatcatacatct 22879930  T
Q  117 c 117  Q
    |    
T  22879931 c 22879931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 24082051 - 24082143
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||| || || |||||||| | | | ||||||||||| ||| ||  ||||||||||| |||||||||||||| ||||    
T  24082051 aatattcaagaaatagacgccacgtcatcaacaaaatccaaaacaacatgcatgtataaaaattctcaacagttgcagcggatataaaccata 24082143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 24228175 - 24228084
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||||  || |||||||| | || | |||||||||| |||||   ||| |||||||||||||||||||||| ||||    
T  24228175 atattcaagaaatagacgctatgtcatcaacaaaatccaaaacaacatgcatgtataaaaattcccaacagtcgcagcggatataaaccata 24228084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 11963183 - 11963215
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgcta 42  Q
    |||| ||||||||||||||||||||||||||||    
T  11963183 cgaataatataaatattcaagaaatagacgcta 11963215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 21228613 - 21228526
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    |||||||||||||||||| ||| || ||| ||||| |||| |  ||||||||||  ||||   |||||||||||||||||||||||||    
T  21228613 atattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcagcggatataaa 21228526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 21614949 - 21615033
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatata 104  Q
    |||||||||||||||||||||| || ||| ||||| | | | ||||||||||| |||||   ||||||||| |||||||||||||    
T  21614949 atattcaagaaatagacgctacgtcatcatacaaaatccaaaacaacatgcatgtataaaaatctcaacagccgcagcggatata 21615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 257024 - 256790
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttc-tcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||| |||||||||||||||  | |||||||| | ||| |||| ||||||||||||  ||| |||||||||||||| ||||||||||||||||||| ||    
T  257024 atatttaagaaatagacgctatgttttcaacaactatca-acaatatgcatatataaagttcatcaacagtcgcagcagatataaatcatacatctctaa 256926  T
Q  121 -atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatct 219  Q
     ||||||||||||||||||||||||| || |  |||||||||||  ||| ||| | |||||||||||||||| ||||||||||| || ||||||||||||    
T  256925 gatatacatgtcataagatcaatataaatgattatataaaatcttcaaatcccaatatatgggcaaaatctccataacataaatccagcataatcaatct 256826  T
Q  220 cgaataatcataaagacaaacatcctagatcagagc 255  Q
     ||||||||||||||||| |||||||||||||||||    
T  256825 agaataatcataaagacagacatcctagatcagagc 256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 99184 - 98999
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaac--aaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||||||||||||| ||||||    ||| |||| |||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  99184 aatataaatattcaagaaatagacgctacgtcttcacataaaaattcaaacaacatgcatatataaaaattctcaacagtcgcagcggatataagtcata 99085  T
Q  112 catctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||||||||| |||||||||||| ||||||||||||||||  ||||||| |||| ||| ||||||||||||| |||||||| ||||    
T  99084 catctccaaagtatacatgtcatgagatcaatatacatcattatataaattctccaaatcccgacatatgggtaaaatctcaataa 98999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 21 - 255
Target Start/End: Original strand, 24236968 - 24237203
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    ||||||||||||||||||||||| |||||||||||   || | ||||||||||||||||   ||||||||| ||| || |||||||||| ||||||||||    
T  24236968 aatattcaagaaatagacgctacgtcttcaacaaaaaccaaatcaacatgcatatataaaaattctcaacattcgtagtggatataaatgatacatctcc 24237067  T
Q  119 aaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaat 217  Q
    ||| |||||||||||||||||||||||||||||||| |  ||||||| ||  ||||||| |||||||||||||| | ||||||||| || ||||||||||    
T  24237068 aaaatatacatgtcataagatcaatatacatcaacaaa--aaatctcaaagtcccgacacatgggcaaaatctcaacaacataaatccagcataatcaat 24237165  T
Q  218 ctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || ||||| ||||||||||| |||||||||||||||||    
T  24237166 ctagaatagtcataaagacagacatcctagatcagagc 24237203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 22725672 - 22725527
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  22725672 aaatattcaagaaatagacgctacatcttcaacaaatatcaaacaacatgcatatataaaattcctcaacagtcgcagcggatataaatcatacatctcc 22725573  T
Q  119 -aaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
     ||| |||||||||||||||||||||||||||| |||| ||||||||    
T  22725572 aaaagatacatgtcataagatcaatatacatcatcata-aaaatctc 22725527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 17264432 - 17264673
Alignment:
Q  18 ataaatattcaagaaatagacgctacatcttcaacaaatttcatacaa-catgcatatataattttctcaacagtcgcagcggatataaatcatacatct 116  Q
    ||||||||||||||||||||| |||| |||||||||||   || |||  |||||||||| || |  ||||||||||||||||||||||||||||||||||    
T  17264432 ataaatattcaagaaatagacactacgtcttcaacaaaaaccaaacatgcatgcatataaaaatc-ctcaacagtcgcagcggatataaatcatacatct 17264530  T
Q  117 ccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacata 211  Q
    ||||| |||||||| ||| ||||||| |||||||| |||||||| |||| ||| ||||||| |||||| ||||||| | |||    |||||| ||  |||    
T  17264531 ccaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaatcccgacaaatgggc-aaatctccacaacataaataaatccagaata 17264629  T
Q  212 atcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  17264630 atcaatctagaataatcataaagacagacatcctagatcagagc 17264673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 22883730 - 22883904
Alignment:
Q  24 attcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaaat 122  Q
    |||||||||||||||||||| ||||||||||||  ||| |||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||| |    
T  22883730 attcaagaaatagacgctacgtcttcaacaaataacat-caacatgcatgtataaaatttctcaacagtcgcaacggatataaatcatacatctccaagt 22883828  T
Q  123 atacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataaca 198  Q
    ||||||| ||| |||||||||||||||| |||||||| |||| ||| ||||||  ||||| |||||||| ||||||    
T  22883829 atacatgccatgagatcaatatacatcatcatataaagtctccaaatcccgacgcatgggtaaaatctcaataaca 22883904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 16000121 - 16000295
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||| ||||||||||||||||||||||||||||   ||| ||||||||||| ||||  ||| |||||||||||||||||||||||||||||||||| ||    
T  16000121 atatttaagaaatagacgctacatcttcaacaaaaa-cat-caacatgcatacataaaatttttcaacagtcgcagcggatataaatcatacatctctaa 16000218  T
Q  121 a-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
      |||||||||||| |||||||||||||||| |||||||| |||||||| || |||||||||| |||||||| ||||    
T  16000219 tgtatacatgtcatgagatcaatatacatcatcatataaattctctaaatcctgacatatgggtaaaatctcaataa 16000295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 254
Target Start/End: Complemental strand, 22499547 - 22499303
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||||||||||||||| || |||||||| | || |||||| |||||||| ||  ||||||||||| |||||||||||| ||||||||    
T  22499547 aatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaacaacaggcatatataaaaattctcaacagttgcagcggatatagatcataca 22499448  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaac 208  Q
    |||||||| | |||||| ||| ||||||| |||||  | |||| ||| |||| ||| ||||||| |||||| ||||||| | |||    |||||| ||      
T  22499447 tctccaaagtctacatgccatgagatcaaaatacaatatcataaaaattctccaaatcccgacaaatgggc-aaatctccacaacataaataaatccaga 22499349  T
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagag 254  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||||    
T  22499348 ataaacaatctagaataatcataaagacagacatcctagatcagag 22499303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 25607837 - 25608003
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataa-ttttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    |||||||||||||||| ||||| ||||||||||   || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  25607837 atattcaagaaatagatgctacttcttcaacaacaatctaaacaacatgcatatataaattttctcaacagtcgcagcggatataaatcatacatctcaa 25607936  T
Q  120 aatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaa 186  Q
    | |||||||| ||| ||||||| |||||||| ||||| || |||| ||| |||||||  ||||||||    
T  25607937 agtatacatgccatgagatcaaaatacatcatcatatcaattctccaaatcccgacaattgggcaaa 25608003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 11541944 - 11542134
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatata---attttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||| |||||||||||||||||||| ||| |||   || | |||||||||||||||   |  ||||||||||||| | ||||||||||||||||||||||    
T  11541944 tatttaagaaatagacgctacatctacaataaaaaccaaatcaacatgcatatatataaaaattctcaacagtcgtaacggatataaatcatacatctcc 11542043  T
Q  119 aaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaaca 209  Q
    ||| ||||||||||||||||||||| |||||||||||| |||||||| ||  ||||||| |||||||||||||| | ||||||||| |||||    
T  11542044 aaagtatacatgtcataagatcaatttacatcaacata-aaaatctccaagtcccgacacatgggcaaaatctcaacaacataaatccaaca 11542134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 251
Target Start/End: Original strand, 23216583 - 23216827
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||||||  || |||||||||||||||||   ||||||||||| ||||| |||||||| |    
T  23216583 cgaataatataaatattcaagaaatagacgttacgtcttcaacaaatc-caaacaacatgcatatataaaaattctcaacagttgcagctgatataaacc 23216681  T
Q  109 atacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaatt 204  Q
    ||||| ||| || |||||||| ||| ||||||| |||||||| |||| ||| |||| |   ||||||| |||||| ||||||  | |||    ||||||     
T  23216682 atacacctcaaagtatacatgccatgagatcaaaatacatcatcataaaaattctccatttcccgacaaatgggc-aaatctatacaacataaataaatc 23216780  T
Q  205 caacataatcaatctcgaataatcataaagacaaacatcctagatca 251  Q
    ||  |||| |||||| ||||||||||||||||| |||| ||||||||    
T  23216781 cagaataaacaatctagaataatcataaagacagacatactagatca 23216827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 24554823 - 24554573
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||| || || ||||||||  || | |||||  | ||||||||   || ||||||||||||||||||||||||    
T  24554823 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaatccaaacaacgggtatatataaaaattatcaacagtcgcagcggatataaat 24554724  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattca 206  Q
    |||||||||||||| |||||||| ||| ||||||| |||||||| |||||||| ||||| ||  |||||| || ||  ||||||| | |||||||||  |    
T  24554723 catacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctctgaattccgaca-attgggtaaatctccacaacataaataaa 24554625  T
Q  207 ac-ataat---caatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     | |||||   |||||| |||||||||| |||||| |||||||||||||||||    
T  24554624 tctataattaacaatctagaataatcat-aagacagacatcctagatcagagc 24554573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 17499783 - 17499940
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataat-tttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||    | | ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  17499783 cgaataatataaatattcaagaaatagacgttacgtcttcaacaaaaactaaatcaacatgaatatataaaatttctcaacagtcgcagcggatataaat 17499882  T
Q  108 catacatctcc-aaatatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    ||||||||||| ||||||||||| |||   ||||| |||||||| |||||||| ||||    
T  17499883 catacatctccaaaatatacatgccatgcaatcaaaatacatcatcatataaattctc 17499940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 255
Target Start/End: Original strand, 20707719 - 20707963
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcataca 113  Q
    |||| ||||||||||||||||||||| ||||| |||||||| | || ||||||||||||||| ||  ||||||||||| ||||| |||| ||| ||||||    
T  20707719 aatacaaatattcaagaaatagacgccacatcatcaacaaaatccaaacaacatgcatatataaaaattctcaacagttgcagcagatagaaaccataca 20707818  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaac 208  Q
     ||| ||| |||||||| ||||||||||| ||||| || |||| ||| |||  ||| ||||||| |||||  | ||||| | |||    |||||| |||     
T  20707819 cctcaaaagtatacatgacataagatcaaaatacaacatcataaaaattcttcaaatcccgacaaatggg-tagatctccacaacataaataaatccaag 20707917  T
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||| |||||| |||||||||| |||||| |||||||||||||||||    
T  20707918 ataaacaatctagaataatcat-aagacagacatcctagatcagagc 20707963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 256
Target Start/End: Complemental strand, 23119088 - 23118837
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||| |||||||||||||| ||||||||  |  ||||||||   || | ||| ||||||||||||   |||||||||||||||||||||||||||    
T  23119088 cgaataataaaaatattcaagaaacagacgctatgtgatcaacaaaaaccaaatcaatatgcatatataaaaattctcaacagtcgcagcggatataaat 23118989  T
Q  108 catacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaat 203  Q
    |||||| ||| || |||||||| ||| ||||||| ||||| || |||| ||| | || ||| ||||||| |||||| ||||||| | |||    ||||||    
T  23118988 catacacctcaaagtatacatgccatgagatcaaaatacaacatcataaaaattatccaaatcccgacaaatgggc-aaatctccacaacataaataaat 23118890  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagct 256  Q
     ||  |||| |||||| ||||||||||||||| | ||||||||||||||||||    
T  23118889 ccagaataaacaatctagaataatcataaagaaagacatcctagatcagagct 23118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 254
Target Start/End: Complemental strand, 18043399 - 18043151
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||| || |||||| |||||||| ||  ||||||||||| ||||  ||||||||||    
T  18043399 cgaataatacaaatattcaagaaatagacgccacatcatcaacaaattccaaacaacaggcatatataaaaattctcaacagttgcagaagatataaatc 18043300  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaat 203  Q
    ||||| ||| ||| |||||||| ||| || |||| |||||||| |||| | | |||| ||| ||||||| ||| || ||||||| | |||    ||||||    
T  18043299 atacacctcaaaagtatacatgccatgaggtcaaaatacatcatcataaagattctccaaatcccgacaaatgagc-aaatctccacaacataaataaat 18043201  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagag 254  Q
     ||  | || |||||| |||||||||| |||||| ||||||||||||||||    
T  18043200 ccagaacaaacaatctagaataatcat-aagacagacatcctagatcagag 18043151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 23350171 - 23350294
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||||||| ||||||||||||| |||||  |||||||| |||||||||| ||||||||| ||||||| | | |||||||||| ||| ||| ||| ||    
T  23350171 ttctcaacagtagcagcggatataattcatatgtctccaaaatatacatgtcgtaagatcaacatacatccataaataaaatctccaaaacccaacaaat 23350270  T
Q  180 gggcaaaatctcgataacataaat 203  Q
    |||||||||||| |||||||||||    
T  23350271 gggcaaaatctccataacataaat 23350294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 19334257 - 19334125
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||||||| ||| || ||||||||  || | |||||||||||||||||   |||||||||| ||||||||||||| ||    
T  19334257 cgaataatataaatattcaagaaatagacgttacgtcatcaacaaaaatccaaacaacatgcatatataagaattctcaacagccgcagcggatatagat 19334158  T
Q  108 catacatctccaaa-tatacatgtcataagatc 139  Q
    |||||||||||||| |||| ||||||| |||||    
T  19334157 catacatctccaaagtatatatgtcatgagatc 19334125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 45561951 - 45561703
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaa--caaatttcata-caacatgcatatat-aattttctcaacagtcgcagcggatataaatcat 110  Q
    |||||||||||||||||||||||||||||||| ||||  ||||   || | |||||||| ||||| ||  || |||||||||||| ||||||||||||||    
T  45561951 aatataaatattcaagaaatagacgctacatcatcaattcaaaaaccaaatcaacatgcgtatattaaaattatcaacagtcgcatcggatataaatcat 45561852  T
Q  111 acatctcca-aatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat---tca 206  Q
    ||| ||| | | |||||||| ||  ||||||| |||||||| |||||||| |||| ||| ||||||| || ||| ||| ||| | |||||||||   ||     
T  45561851 acacctcaagagtatacatgccaagagatcaaaatacatcatcatataaattctccaaatcccgacaaattggc-aaacctccacaacataaataaatcc 45561753  T
Q  207 aca-taatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||| ||| |||| | ||||||||||||| ||| |||||||||||||||||    
T  45561752 acagtaaacaatttagaataatcataaacacagacatcctagatcagagc 45561703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 11600011 - 11600188
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    |||||||||||||||||||||| |||||||||||    | | ||||||||||||||||   || ||||||||||||||||||||| || |||| ||||||    
T  11600011 atattcaagaaatagacgctacgtcttcaacaaaaacaaaatcaacatgcatatataaaaattatcaacagtcgcagcggatatagataatacttctcca 11600110  T
Q  120 aa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    || |  ||||| ||||||||||| |||||||| |||||||| |||  ||| ||| ||||||||| ||| |||| ||||    
T  11600111 aagtcgacatgccataagatcaaaatacatcatcatataaattcttcaaatcccaacatatgggtaaagtctcaataa 11600188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 24265921 - 24266018
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    |||| |||||||||||||||||||||||||| || || |||||||| ||| | ||||||||||| |||||  ||||||||||| ||||||||||||||    
T  24265921 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaattcaaaacaacatgcatgtataaaattctcaacagttgcagcggatataaa 24266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 121
Target Start/End: Original strand, 24905885 - 24905986
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcataca-acatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    ||||||||||||||||| |||| |||||||||||   || ||| ||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||    
T  24905885 atattcaagaaatagacactacgtcttcaacaaaaaccaaacatacatgcatacataaatattctcaacagtcgtagcggatataaatcatacatctcca 24905984  T
Q  120 aa 121  Q
    ||    
T  24905985 aa 24905986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 254
Target Start/End: Original strand, 33170251 - 33170425
Alignment:
Q  82 tctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatg 180  Q
    |||||| ||| ||||| ||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| |||| ||| |||| ||| ||||||| |||    
T  33170251 tctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcata-aaattctccaaatcccgacaaatg 33170349  T
Q  181 ggcaaaatctcgataac----ataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagag 254  Q
    | | ||||||| | |||    |||||| ||  |||| |||||| ||||||||||||| ||||||||||||||||||||    
T  33170350 gac-aaatctccacaacataaataaatccagaataaacaatctagaataatcataaa-acaaacatcctagatcagag 33170425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 22311036 - 22311171
Alignment:
Q  63 caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaa 160  Q
    ||||||||||||||||   |||||||| ||| || | ||||||||||||||| ||| ||| ||| |||||||| ||||||| |||||||| ||| ||||     
T  22311036 caacatgcatatataaaaattctcaaccgtcccaactgatataaatcatacacctcaaaagtattcatgtcatgagatcaaaatacatcatcatgtaaat 22311135  T
Q  161 tctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||| ||| ||||||||||||| |||||||| ||||    
T  22311136 tctccaaatcccgacatatgggtaaaatctcaataa 22311171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 18263651 - 18263526
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||||||| ||||||||||||||||  || || |||||||| | || | |||||| ||| |||||  |||||||||||||||||||||||||| |    
T  18263651 cgaataatataaaaattcaagaaatagacgtcacgtcatcaacaaaatccaaaacaacatccatgtataaaattctcaacagtcgcagcggatataaacc 18263552  T
Q  109 atacatctccaaa-tatacatgtcat 133  Q
    ||||| ||| ||| ||||||||||||    
T  18263551 atacacctcaaaagtatacatgtcat 18263526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 24905992 - 24906101
Alignment:
Q  146 catcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcct 245  Q
    |||||| | || ||||||| ||| || | |||||| ||||| |||| |||| | |||| || ||||| |||||| ||||||||||||||||||| |||||    
T  24905992 catcaatacatgaaatctccaaaacctggcatatgtgcaaagtctccataatacaaatccagcataaacaatctagaataatcataaagacaaatatcct 24906091  T
Q  246 agatcagagc 255  Q
    ||||||||||    
T  24906092 agatcagagc 24906101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 7468232 - 7468470
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatcatacat 114  Q
    ||||||||||||||||||||| |||| || || |||||||| | || ||||||  |||||| ||  ||||||||||| |||||||||||||| || |||     
T  7468232 aatataaatattcaagaaatatacgccacgtcatcaacaaaatccaaacaacagacatata-aaaattctcaacagttgcagcggatataaaccacacac 7468330  T
Q  115 ctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgata----acataaattcaaca 209  Q
     || |||  ||||||| ||| | ||||| ||||| || |||| ||  |||| ||| ||||||| |||||| ||||||| | |    | |||||| ||| |    
T  7468331 ttcaaaagaatacatgccatgaaatcaagatacaacatcataaaagttctccaaatcccgacaaatgggc-aaatctccacaatgtaaataaatccaaaa 7468429  T
Q  210 taatcaatctcgaataatcataaagacaaacatcctagatca 251  Q
    ||| |||||| |||||||||| |||||| |||||||||||||    
T  7468430 taaacaatctagaataatcat-aagacagacatcctagatca 7468470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 255
Target Start/End: Original strand, 23879041 - 23879127
Alignment:
Q  173 gacatatgggcaaaatctcgataacataaa----ttcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||||||||||||||||||| |||||||||     | ||  ||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  23879041 gacatatgggcaaaatctcaataacataagcaagtccagaataatcaatctagaataatcatacagacagacatcctagatcagagc 23879127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 21234275 - 21234230
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaa 55  Q
    |||| |||||||||||||||||||||||||| ||||| ||||||||    
T  21234275 cgaataatataaatattcaagaaatagacgccacatcatcaacaaa 21234230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 27233441 - 27233352
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagc 97  Q
    |||| |||||||||||||||||||||||||  ||||| |||||||| | | | |||||||||||| || ||  |||||||||||||||||    
T  27233441 cgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccaaaacaacatgcatacataaaaattctcaacagtcgcagc 27233352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 22319700 - 22319751
Alignment:
Q  145 acatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||| ||||    
T  22319700 acatcatcatataaattctctaaatcccgacatatgggtaaaatctcaataa 22319751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 37655838 - 37655788
Alignment:
Q  62 acaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  37655838 acaacatgcatatataaaaattctcaacagtcgcagcggatataaaccata 37655788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 18120572 - 18120528
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaatatacat 128  Q
    |||||| ||||| |||||||||||||||||||| ||| |||||||    
T  18120572 tcaacattcgcaacggatataaatcatacatctacaagtatacat 18120528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 33170177 - 33170221
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaa 54  Q
    |||| |||||||||||||||||||||||||| || || |||||||    
T  33170177 cgaataatataaatattcaagaaatagacgccacgtcatcaacaa 33170221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 255
Target Start/End: Original strand, 16131196 - 16131433
Alignment:
Q  23 tattcaagaaatagacgctacatcttca-acaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||||||||| |||||| |  ||  ||| |||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||    
T  16131196 tattcaagaaatagacgctacgtcttcacatcaaaatcaaacaacatgcatatataaaaattctcaacagtcgcaggggatataaatcatacatctccaa 16131295  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacat----aaattcaacataatcaa 216  Q
    |||||||||||| |||| |||||||||||  ||||||||||||| ||| |||||||||||||||||||||| | |||||    |||| ||   |||||||    
T  16131296 atatacatgtca-aagaacaatatacatcgccatataaaatctccaaatcccgacatatgggcaaaatctccacaacataaacaaatccagattaatcaa 16131394  T
Q  217 tctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||| ||||||||||||||||| |||||||||||||||||    
T  16131395 tctagaataatcataaagacagacatcctagatcagagc 16131433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 10 - 255
Target Start/End: Complemental strand, 22595908 - 22595659
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataat-tttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    | | ||||||||||||||||  |||||||||||||||||| |||||||||    
T  22595908 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaaaactaaatcaacatgcatatataaaatttctcaacagtcgcagcagatataaat 22595809  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat--- 203  Q
    |||||||||||||| ||||||||||||  |||||| |||||||| |||||||| |||| ||| ||||||| |||||  ||||||| | |||||||||       
T  22595808 catacatctccaaagtatacatgtcatgtgatcaaaatacatcatcatataaattctccaaaccccgacaaatggg-taaatctccaaaacataaataag 22595710  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | |  |||| |||||| |||||||||| |||| | |||||||||||||||||    
T  22595709 taagaataaacaatctagaataatcat-aagatagacatcctagatcagagc 22595659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 29163155 - 29162912
Alignment:
Q  18 ataaatattcaagaaatagacgctacatcttcaac-aaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacatc 115  Q
    ||||||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||| ||  |||||||||||| ||||||||||| ||||||||||    
T  29163155 ataaatattcaagaaatagacgctacatcatcaacaaaaatccaaacaacatgcatatataaaaattctcaacagtcacagcggatatagatcatacatc 29163056  T
Q  116 tccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaacat 210  Q
    |||||| |||||||||||| ||||||| |||||||| | |||||| |||  ||| | ||| | |||||||||| ||| | |||    |||||| ||  ||    
T  29163055 tccaaagtatacatgtcatgagatcaaaatacatcatcgtataaattcttcaaatctcgaaaaatgggcaaaa-ctccacaacataaataaatccagaat 29162957  T
Q  211 aatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || |||||| ||||||||||||||||| |||||||||||||||||    
T  29162956 aaacaatctagaataatcataaagacagacatcctagatcagagc 29162912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 10 - 203
Target Start/End: Complemental strand, 17858615 - 17858420
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||| |||||||||||||||| | ||||| ||| |||||||| ||| ||||||||||| |||||   ||||||||||||||||||||||||||||    
T  17858615 cgaataatacaaatattcaagaaatacatgctacgtctgcaacaaatatcaaacaacatgcatttataaaaattctcaacagtcgcagcggatataaatc 17858516  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||||||| ||||  |||||||||||||||||||| ||||||| | | |||||||||| ||| ||||||| ||||  |||||||| || ||||||||    
T  17858515 atacatcaccaaggtatacatgtcataagatcaacatacatccataaataaaatctcaaaaacccgacaaatggtaaaaatctccatgacataaat 17858420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 63 - 251
Target Start/End: Original strand, 21929422 - 21929609
Alignment:
Q  63 caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaatatacatgtcataagatcaatatacatcaacatataaaat 161  Q
    ||||||||||||||||   |||| |||||||||||| |||||| || ||||||||||||| |||||||||||||   ||| ||| ||||| | |||||||    
T  21929422 caacatgcatatataaaaattcttaacagtcgcagcagatatatataatacatctccaaa-atacatgtcataactccaa-atatatcaatacataaaat 21929519  T
Q  162 ctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatca 251  Q
    ||| ||| || ||||||||||||||||||| |||||| |||| |||||||| |||||| ||| |||||||||||||||||||||||||||    
T  21929520 ctccaaaaccggacatatgggcaaaatctccataacaaaaatccaacataaacaatctagaacaatcataaagacaaacatcctagatca 21929609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 23218920 - 23219063
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||||||||| ||| ||| |||   || | ||||||||||||| ||   |||||||||||||||||||||||||||||||| |||||||    
T  23218920 tattcaagaaatagacgctacgtctacaataaaaaccaaatcaacatgcatatagaaaaattctcaacagtcgcagcggatataaatcatacgtctccaa 23219019  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  23219020 atatacatgtcataagatcaatatacatcatcatataaaatctc 23219063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 15006872 - 15006639
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||||||||||||||| || |||||||| | || |||||| |||||||| ||  |||| |||||| |||||||||||||| ||||||    
T  15006872 aatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaacaacaggcatatataaaaattcttaacagttgcagcggatataaaccataca 15006773  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataa 212  Q
     ||  ||| | |||||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||||| |||||| ||||||| | |||||||       ||||    
T  15006772 ccttaaaagtctacatgccatgagatcaaaatacaacatcataaaaattctcgaaatcccgacaaatgggc-aaatctccacaacataa-------ataa 15006681  T
Q  213 tcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
      ||||| |||||||||| |||||| |||||||||||||||||    
T  15006680 ataatctagaataatcat-aagacagacatcctagatcagagc 15006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 191
Target Start/End: Original strand, 16373913 - 16374098
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataattttc-tcaacagtcgcagcggatataaat 107  Q
    |||| |||| ||||||||||||| ||||||  || ||||||||||||| || |  |||||||||||||||  ||| |||| ||||||||||||||||||     
T  16373913 cgaataatacaaatattcaagaattagacgtgacgtcttcaacaaattccaaaataacatgcatatataaaattcctcaaaagtcgcagcggatataaaa 16374012  T
Q  108 catacatctcc-aaatatacatgtcataagatca-atatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctc 191  Q
    ||||||||||| ||||||| |||||||||  ||| | |||| ||| || |||||||||| ||| ||| ||||||||| ||||||||    
T  16374013 catacatctccaaaatatatatgtcataaactcatacatacgtcaccaaataaaatctccaaatcccaacatatgggtaaaatctc 16374098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 34964858 - 34965052
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||| ||||||||||  | || |||||||| | || |||||| |||||| | ||  ||||||||| | ||||| |||||||| |    
T  34964858 cgaataatataaatattcaaaaaatagacgcctcgtcatcaacaaagtccaaacaacaggcatatttaaaaattctcaacatttgcagcagatataaacc 34964957  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||||| ||  ||| |||||||| ||| ||||||| |||||||| |||| ||| |||||||| ||||||| ||||| |||||||| | |||||||||    
T  34964958 atacacctaaaaagtatacatgccatgagatcaaaatacatcatcataaaaattctctaaatcccgacaaatggg-aaaatctccacaacataaat 34965052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 19670472 - 19670574
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||| | ||| |||||||| | || | ||||||||||||||||   ||||||||||| |||||||||||||| |||||| ||||    
T  19670472 aatattcaagaaatagacgccagatcatcaacaaaatccaaaacaacatgcatatataaaaattctcaacagttgcagcggatataaaccatacacctcc 19670571  T
Q  119 aaa 121  Q
    |||    
T  19670572 aaa 19670574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 22846049 - 22846152
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc--atacaacatgcatatataattttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||||| ||||||| || |||| |||  ||  | ||||||||||| |||||  ||||||| ||||||||||||||||||     
T  22846049 cgaataatataaatattcaagaaataaacgctacgtcatcaaaaaaaatccaaaacaacatgcatgtataaaattctcaatagtcgcagcggatataaac 22846148  T
Q  108 cata 111  Q
    ||||    
T  22846149 cata 22846152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 155
Target Start/End: Complemental strand, 31469749 - 31469614
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||| || || |||||||| | || | |||||||||| |||||   |||||||| || ||||||||||||||||||||| |||     
T  31469749 aatattcaagaaatagacgccacgtcatcaacaaaatccaaaacaacatgcatgtataaaaattctcaacggttgcagcggatataaatcatacacctcg 31469650  T
Q  119 aaatatacatgtcataagatcaatatacatcaacata 155  Q
    |  |||| ||||||| ||||||| |||||||| ||||    
T  31469649 acgtatagatgtcatgagatcaa-atacatcatcata 31469614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 255
Target Start/End: Complemental strand, 22468283 - 22468105
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatat 179  Q
    ||||||||||| |||||||||||| ||||| |||||| ||| | |||||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||||| ||    
T  22468283 ttctcaacagttgcagcggatatagatcatgcatctctaaagtctacatggcatgagatcaaaatacaacatcataaaaattctccaaatcccgacaaat 22468184  T
Q  180 gggcaaaatctcgataac----ataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    || | ||||||| | |||    |||||| ||  |||| |||||| ||||||||||||| ||| ||||||| ||| |||||    
T  22468183 ggac-aaatctccacaacataaataaatccagaataaacaatctagaataatcataaaaacagacatccttgattagagc 22468105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 17375959 - 17375831
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatata-attttctcaacagtcgcagcggatataaa 106  Q
    |||| ||||| |||||| |||||||||||||||| ||||||   | ||   || ||||||| |||||||| | ||  ||||||||||||||| ||||||     
T  17375959 cgaataatattaatatttaagaaatagacgctacgtcttcacatccaaaaccaaacaacatacatatatacaattattcaacagtcgcagcgaatataag 17375860  T
Q  107 tcatacatctccaaatatacatgtcataa 135  Q
    ||||||||| |||| ||||||||||||||    
T  17375859 tcatacatcaccaagtatacatgtcataa 17375831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 23219093 - 23219153
Alignment:
Q  195 aacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||| |||| ||||||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  23219093 aacacaaatccaacataaataatctagaataatcataaagacagacatcctagatcagagc 23219153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 7830145 - 7830059
Alignment:
Q  23 tattcaagaaatagacgctacatcttca-acaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    |||||||||||||||||||||||| ||| ||||| |||| |  ||||||||||  ||||   |||||||||||||||||||||||||    
T  7830145 tattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgaataaaaatctcaacagtcgcagcggatataaa 7830059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 12311239 - 12311148
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||||| |  |||||||| | || | |||||||||| |||||   |||||||||||||||||||||||||| ||||    
T  12311239 atattcaagaaatagacgctacgttatcaacaaaatccaaagcaacatgcatgtataaaaattctcaacagtcgcagcggatataaaccata 12311148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 6092467 - 6092547
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggat 101  Q
    |||||||||||||||||||||| || ||||||||  || | |||||||||||  |||   |||||||||||||||||||||    
T  6092467 atattcaagaaatagacgctacgtcatcaacaaaggtcaaaacaacatgcatgcatataattctcaacagtcgcagcggat 6092547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 941279 - 941159
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttca-acaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||| || ||||||| || ||| |||||  || | ||||| ||||| |||||  |||||||||| |||||||||||||||     
T  941279 cgaataatataaatattcaagaattatacgctacgtcatcatacaaaaatcaaaacaacgtgcatgtataa-attctcaacagccgcagcggatataaac 941181  T
Q  108 catacatctccaaatatacatg 129  Q
    |||| |  ||||| ||||||||    
T  941180 catataattccaagtatacatg 941159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 9192154 - 9192195
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa 51  Q
    |||| |||||||||||||||||||||||||  ||||||||||    
T  9192154 cgaataatataaatattcaagaaatagacgtcacatcttcaa 9192195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 17085740 - 17085671
Alignment:
Q  64 aacatgcatatataattttctcaacagtcgcagcggatataaatcatacatctccaaatatacatgtcat 133  Q
    ||||||||| |||||   ||||||||||||||||||||| |||||||| |  || || ||||||||||||    
T  17085740 aacatgcatgtataaaaatctcaacagtcgcagcggatacaaatcatatacttcaaattatacatgtcat 17085671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 16890039 - 16889948
Alignment:
Q  23 tattcaagaaatagacgctacatcttca-acaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||| ||| || ||| ||||| |||| |  ||||||||||  ||||   ||||||||||||||||||||||||| ||||    
T  16890039 tattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaagtctcaacagtcgcagcggatataaaccata 16889948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 84 - 239
Target Start/End: Original strand, 19643889 - 19644045
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| | |||| ||||||    
T  19643889 tcaacagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcatataaattctctaaatctcgacgtatggg 19643988  T
Q  183 caaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaa 239  Q
     |||||||| | ||||||||| ||||||||||||||| |||||||||||||||||||    
T  19643989 aaaaatctcaacaacataaatccaacataatcaatctagaataatcataaagacaaa 19644045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 6092379 - 6092628
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatca 109  Q
    |||| ||||||||||||||||||||||||||||| || |||||||| | || |||||| ||||||||||  ||||||||||| |||||||||||| ||||    
T  6092379 cgaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaacaacaagcatatataaaattctcaacagttgcagcggatatagatca 6092478  T
Q  110 tacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaatt 204  Q
    |||||||||||| | |||||||| ||||||||| ||||| || |||| ||| |||| ||| ||||||| |||||| |||||||   |||    ||||||     
T  6092479 tacatctccaaagtctacatgtcgtaagatcaaaatacaacatcataaaaattctccaaatcccgacaaatgggc-aaatctccgcaacataaataaatc 6092577  T
Q  205 caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||  |||| |||||| ||||||||||||||||| |||||||||||||||||    
T  6092578 cagaataaacaatctagaataatcataaagacagacatcctagatcagagc 6092628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 20270870 - 20271053
Alignment:
Q  23 tattcaagaaataga--cgctacatcttcaacaaatttcata--caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctc 117  Q
    |||||||||||||||  |||||| |||||||||||  ||| |  ||||||| ||||||||   ||||||| ||||||||| |||||||||||||||||||    
T  20270870 tattcaagaaatagatgcgctacgtcttcaacaaaaatcaaaatcaacatgaatatataaaaattctcaatagtcgcagcagatataaatcatacatctc 20270969  T
Q  118 caaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaa 202  Q
    ||||||||||||||||||  || | ||| ||||| | |||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  20270970 caaatatacatgtcataa-ctccaaatatatcaatacataaaatctccaaaacccgacatatgggcaaaatctccataacataaa 20271053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 92 - 255
Target Start/End: Complemental strand, 45620604 - 45620441
Alignment:
Q  92 cgcagcggatataaatcatacatctccaaatatacatgtcataagatcaatatacatcaacatataaaa-tctctaaagcccgacatatgggcaaaatct 190  Q
    ||||||||||||||||||||||||||||| ||||||||| || |   ||| |||   | | | |||||| |||| ||| |||||||||| ||||||||||    
T  45620604 cgcagcggatataaatcatacatctccaagtatacatgttattactccaa-atatggcgatacataaaaatctccaaatcccgacatatcggcaaaatct 45620506  T
Q  191 cgataacataaattcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | ||||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  45620505 ctataacataaatccagcataatcaatctagaataatcataaagacagacatcctagatcagagc 45620441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 18533281 - 18533473
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataatt---ttctcaacagtcgcagcggatata 104  Q
    |||| ||||||| ||||||||||||||| ||||| ||||||   |||| || | |||||||| | ||||||     ||||||||||||||||||||||||    
T  18533281 cgaataatataattattcaagaaatagatgctacgtcttcacatcaaaattaaaacaacatggacatataaaaaaattctcaacagtcgcagcggatata 18533380  T
Q  105 aatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    || |||||||||||||| |||||||||||| ||||||| |||||||| |||||||| |||  ||  ||| ||||||||| |||||||| ||||    
T  18533381 aaacatacatctccaaagtatacatgtcatgagatcaaaatacatcatcatataaattcttcaagtcccaacatatgggtaaaatctcaataa 18533473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 24839356 - 24839493
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttc--aacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||| |||||||||||||||||||| |||||  | |||| |||| ||||||||||||||| ||  ||||||||||||||||| ||||||| |||||    
T  24839356 aatataaaaattcaagaaatagacgctacgtcttcatatcaaaattcaaacaacatgcatatataaaaattctcaacagtcgcagcagatataattcata 24839455  T
Q  112 catctcc-aaatatacatgtcataagatcaatatacat 148  Q
      ||||| ||||||||||||||||||||||| ||||||    
T  24839456 tgtctccaaaatatacatgtcataagatcaacatacat 24839493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 30995228 - 30995059
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaa 106  Q
    |||| |||||||||||||||||||||||||| || || ||||  |||| | || | ||||  |||||||||   ||||||||||||||||||||||||||    
T  30995228 cgaataatataaatattcaagaaatagacgccacgtcatcaattcaaaatccaaataacagacatatataaaaattctcaacagtcgcagcggatataaa 30995129  T
Q  107 tcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgaca 176  Q
     |||||| ||| ||| |||||||||||  ||||||| |||||||||| || ||| |||||||| |||||||    
T  30995128 ccatacacctcaaaagtatacatgtca-gagatcaaaatacatcaacctaaaaattctctaaatcccgaca 30995059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 24271974 - 24272169
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| ||| |||||||||||||||||||||| || || ||||| || | || |  ||||||||| |||||   |||||||||||||||| ||||||||||    
T  24271974 cgaataatgtaaatattcaagaaatagacgccacgtcatcaacgaaatccaaaataacatgcatgtataaaaattctcaacagtcgcagtggatataaat 24272073  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    |||||| ||| ||| |||| ||||||| | ||||| |||||||| |||| ||| |||| ||| ||||||| |||||  ||||||| | |||||||||    
T  24272074 catacacctctaaagtatatatgtcatgatatcaaaatacatcatcataaaaattctccaaatcccgacaaatggg-taaatctctaaaacataaat 24272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 155
Target Start/End: Original strand, 19648022 - 19648160
Alignment:
Q  21 aatattcaagaaatagacgctacatcttca-ac-aaatttcatacaa-catgcatatataattttctcaacagtcgcagcgga-tataaatcatacatct 116  Q
    |||||||||||||||||||||||||| ||| || ||||| || |||| ||||||||||||| | ||||||||||||||||||| |||||| ||||||  |    
T  19648022 aatattcaagaaatagacgctacatcatcatacaaaattccaaacaatcatgcatatataa-tatctcaacagtcgcagcggattataaaccatacactt 19648120  T
Q  117 ccaaatatacatgtcataagatcaat-atacatcaacata 155  Q
    | ||||||||||| ||| | |||||| |||||||||||||    
T  19648121 caaaatatacatgccatgatatcaataatacatcaacata 19648160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 19436155 - 19436069
Alignment:
Q  22 atattcaagaaatagacgctacatc-ttcaacaaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    |||||||||||||||| |||||||| || |||||| | || | |||||||||| |||||   |||||||||||||||||||||||||    
T  19436155 atattcaagaaatagaagctacatcattaaacaaaatccaaaacaacatgcatgtataaaaatctcaacagtcgcagcggatataaa 19436069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 22138046 - 22137936
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttc-atacaacatgcatatataattttctcaacagtcgcagcgga-tataaatcatacatctcc 118  Q
    |||||||||||||||||||||| || ||| ||||||| | | ||||||||||| |||||   |||||||||||||||| || ||||||||||| |  ||     
T  22138046 atattcaagaaatagacgctacgtcatcacacaaattccaaaacaacatgcatgtataaaaatctcaacagtcgcagcagattataaatcatataattca 22137947  T
Q  119 aaatatacatg 129  Q
    |||||||||||    
T  22137946 aaatatacatg 22137936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 23823730 - 23823645
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    ||||||||||||||| ||||| || |||||||| |||| |  ||||||||||  ||||   |||||||||||||||||||||||||    
T  23823730 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcagcggatataaa 23823645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 106
Target Start/End: Complemental strand, 23825674 - 23825589
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    ||||||||||||||| ||||| || |||||||| |||| |  ||||||||||  ||||   |||||||||||||||||||||||||    
T  23825674 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcagcggatataaa 23825589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 25593177 - 25593209
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaa 55  Q
    ||||||||||||||| |||||||||||||||||    
T  25593177 tattcaagaaatagatgctacatcttcaacaaa 25593209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Original strand, 29111866 - 29111898
Alignment:
Q  170 cccgacatatgggcaaaatctcgataacataaa 202  Q
    |||||||||||||||||||||| ||||||||||    
T  29111866 cccgacatatgggcaaaatctccataacataaa 29111898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 5284 - 5456
Alignment:
Q  22 atattcaagaaatagacgctaca-tcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    ||||||||||||||||||||||  ||||||||||||||||  ||||||||||||||||  ||| |||||||||||||  |||||||||||||||||||||    
T  5284 atattcaagaaatagacgctaccgtcttcaacaaatttcaaccaacatgcatatataaaatttatcaacagtcgcagatgatataaatcatacatctcca 5383  T
Q  120 aa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctc 191  Q
    || ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||| ||||    
T  5384 aaatatacatgtcataagatcaatatacattatcatataaaatctctaaaacccgacaaatgggcaaattctc 5456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 203
Target Start/End: Original strand, 2426 - 2609
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||| ||||| ||||||   |||| |||| |||||||||||||||||  ||||||||||||||||||||||||| || |||||| ||||    
T  2426 tattcaagaaatagatgctacgtcttcacatcaaaattcaaacaacatgcatatataaaattctcaacagtcgcagcggatataagtcctacatcaccaa 2525  T
Q  121 a-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    | |||||||||||||||||||| ||||||| | | |||||||||| ||| ||||||| || ||||||||||| |||||||||||    
T  2526 agtatacatgtcataagatcaacatacatccataaataaaatctccaaaacccgacaaataggcaaaatctccataacataaat 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 9e-39; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 21041718 - 21041967
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataat-tttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||||||| |||||||||  ||||||||||    | | ||||||||||||||||  ||||||||||||||||||||||||||||    
T  21041718 cgaataatataaatattcaagaaacagacgctacgccttcaacaaaaactaaatcaacatgcatatataaaatttctcaacagtcgcagcggatataaat 21041817  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat--- 203  Q
    |||||||||||||| ||||| ||||||  |||||| |||||||| |||||||| |||| ||| ||||||| |||||  ||||||| | |||||||||       
T  21041818 catacatctccaaagtatacttgtcatgtgatcaaaatacatcatcatataaattctccaaatcccgacaaatggg-taaatctccacaacataaataag 21041916  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||  |||| | |||| |||||||||| |||||| |||||||||||| ||||    
T  21041917 tcagaataaacgatctagaataatcat-aagacagacatcctagatccgagc 21041967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 33383848 - 33384098
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||| ||| || |||| ||| | || |||||| |||||||| ||  ||||||||||| |||||||||||| |||    
T  33383848 cgaataatataaatattcaagaaatagacgttacgtcatcaagaaaatccaaacaacaagcatatataaaaattctcaacagttgcagcggatatagatc 33383947  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaat 203  Q
    ||||||||||||| | |||||||||| ||||||| ||||| || |||| ||| |||| |||  |||||| |||||| |||||||   |||    ||||||    
T  33383948 atacatctccaaagtctacatgtcatgagatcaaaatacaacatcataaaaattctccaaattccgacaaatgggc-aaatctccgaaacataaataaat 33384046  T
Q  204 tcaacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
     ||  |||| |||||| ||||||||||||||||| |||||||||||||||||    
T  33384047 ccagaataaacaatctagaataatcataaagacagacatcctagatcagagc 33384098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 255
Target Start/End: Complemental strand, 41213900 - 41213657
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||||||||||||||| || ||||||||    || ||||||||||||||||   ||||||||||| ||||| |||||||| ||||||    
T  41213900 aatataaatattcaagaaatagacgctacgtcatcaacaaaaccaat-caacatgcatatataaaaattctcaacagttgcagcagatataaaccataca 41213802  T
Q  114 tctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaac---- 208  Q
     ||| ||| ||||||||| || |||| || |||||||| |||| ||| |||| ||| ||||||| ||||||||| |||| |||||||||||  | |        
T  41213801 cctcaaaagtatacatgtaatgagattaaaatacatcatcataaaaattctccaaatcccgacaaatgggcaaa-tctccataacataaataaatccaga 41213703  T
Q  209 ataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    |||| |||||| |||||||| ||| |||| |||||||||||||||||    
T  41213702 ataaacaatctagaataatcgtaa-gacagacatcctagatcagagc 41213657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 78739 - 78550
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||| |||  || ||||||||  || | ||||||||||||| |||   ||||||||||| |||||||||||| ||    
T  78739 cgaataatataaatattcaagaaatagacactatgtcatcaacaaaaatccaaacaacatgcatatgtaaaaattctcaacagtggcagcggatatagat 78640  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    |||||||||||||| |||||||| ||| ||||||| |||||||| ||| |||| |||| ||| |  ||||| |||| |||||||| ||||    
T  78639 catacatctccaaagtatacatgccatgagatcaaaatacatcatcatgtaaattctccaaatcttgacatgtgggtaaaatctcaataa 78550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 20820475 - 20820601
Alignment:
Q  119 aaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatc 218  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| | ||||||||  ||        ||||    
T  20820475 aaatatacaagtcataagatcaatatacatcatcatataaaatctctaaatcccgacatattggcaaaatctcaacaacataaa--ca--------aatc 20820564  T
Q  219 tcgaataatcataaagacaaacatcctagatcagagc 255  Q
    | ||||||||||||||| | |||||||||||||||||    
T  20820565 tagaataatcataaagatagacatcctagatcagagc 20820601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 255
Target Start/End: Original strand, 40555301 - 40555550
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||| || || ||||||||    | | ||||| ||||||||||   ||||||||||| ||||||||||||||     
T  40555301 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaacaaaatcaacaggcatatataaaaattctcaacagttgcagcggatataaac 40555400  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaatt-- 204  Q
    |||||| ||| | | |||||||||||| ||||||| |||||||| |||| ||| |||  ||| ||||||| ||||||||| |||| | |||||||||       
T  40555401 catacacctcaatagtatacatgtcatgagatcaaaatacatcatcata-aaattcttcaaatcccgacaaatgggcaaa-tctccacaacataaataaa 40555498  T
Q  205 --caacataatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
      ||| |||| |||||| |||||||||||| |||| |||||||||||||||||    
T  40555499 tccaaaataaacaatctagaataatcataa-gacagacatcctagatcagagc 40555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 255
Target Start/End: Complemental strand, 5770437 - 5770194
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacat 114  Q
    ||||||||||||||||||||||||| || || |||||||    || ||||||||| ||||| ||  ||||||||||| |||||||||||| | || |||     
T  5770437 atataaatattcaagaaatagacgccacgtcatcaacaagaaccaaacaacatgcttatataaaaattctcaacagttgcagcggatatagaccagacac 5770338  T
Q  115 ctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataac----ataaattcaaca 209  Q
    ||| ||| |||| ||| ||| ||||||| ||||| || |||| ||| |||| ||| ||||||| |||||  ||||||| | |||    |||||| ||  |    
T  5770337 ctcaaaagtatatatgccatgagatcaaaatacaacatcataaaaattctccaaatcccgacaaatggg-taaatctccacaacataaataaatccagga 5770239  T
Q  210 taatcaatctcgaataatcataaagacaaacatcctagatcagagc 255  Q
    ||| |||||| |||||||||| ||||||||||||||||||||||||    
T  5770238 taaacaatctagaataatcat-aagacaaacatcctagatcagagc 5770194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 18164147 - 18164261
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    ||||||||||||||||||||  ||||||||||||| | || | |||||||||| |||||   ||||||||||| ||||||||||||||||||||| |||     
T  18164147 aatattcaagaaatagacgccgcatcttcaacaaaatgcaaaacaacatgcatgtataaaaattctcaacagttgcagcggatataaatcatacacctca 18164246  T
Q  119 aaatatacatgtcat 133  Q
    || ||||||||||||    
T  18164247 aagtatacatgtcat 18164261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 5472630 - 5472465
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa--caaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctc 117  Q
    |||||||||||||||||||||| || ||||  |||| | || | |||||||||| |||||   ||| |||||||||||||||||| | ||||||||||||    
T  5472630 atattcaagaaatagacgctacgtcatcaattcaaaatccaaaacaacatgcatgtataaaaattcccaacagtcgcagcggataaagatcatacatctc 5472531  T
Q  118 caaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
     ||| |||||||||||| | ||| | |||||||| |||||||| |||| ||| ||||||| |||||    
T  5472530 aaaagtatacatgtcatgatatcgaaatacatcatcatataaattctccaaatcccgacaaatggg 5472465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 46143704 - 46143847
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||  || || |||||||| | || | |||||| ||| |||||   ||||||||||||||||||||||||||     
T  46143704 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaacaacatccatgtataaaaattctcaacagtcgcagcggatataaac 46143803  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatca 150  Q
     ||||| ||| ||| |||||||||||| | ||||| ||||||||    
T  46143804 gatacacctcaaaagtatacatgtcatgatatcaaaatacatca 46143847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 9293641 - 9293507
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcataca 113  Q
    |||||||||||||||||||||||||||  || ||||||||    | | ||||||||||||||||   ||||||||||||||||||||||||||||||| |    
T  9293641 atataaatattcaagaaatagacgctatgtcatcaacaaaaactaaatcaacatgcatatataaaaattctcaacagtcgcagcggatataaatcatata 9293542  T
Q  114 tctc-caaatatacatgtcataagatcaatataca 147  Q
      ||  ||||||||||||||| | ||||| |||||    
T  9293541 attcaaaaatatacatgtcatgatatcaaaataca 9293507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 20191702 - 20191800
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    ||||||||||||||||||||| ||| ||| |||   || | ||||||||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  20191702 tattcaagaaatagacgctacgtctacaataaaaaccaaatcaacatgcatatataaaaattctcaacagtcgcagcgaatataaatcatacatctcca 20191800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 29217083 - 29217185
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||| ||||||| || ||||||||   | | ||||||||||| |||||  ||||||||||| |||||||||||||| |    
T  29217083 cgaataatataaatattcaagaaatatacgctacgtcatcaacaaaaaccaaaacaacatgcatgtataaaattctcaacagttgcagcggatataaacc 29217182  T
Q  109 ata 111  Q
    |||    
T  29217183 ata 29217185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 12891573 - 12891448
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||| || |||||| | | || ||||||  ||||||| ||   | |||||| | ||| |||||||| |||    
T  12891573 cgaataatataaatattcaagaaatagacgctacgtcatcaacataatccaaacaacagacatatataaaaaatttcaacaattgcaacggatatagatc 12891474  T
Q  109 atacatctcc-aaatatacatgtcat 133  Q
    |||||||||| |||||||||||||||    
T  12891473 atacatctccaaaatatacatgtcat 12891448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 21223658 - 21223749
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaatcat 110  Q
    |||||||||||||||||||| ||| ||||||| | ||||| | |||||||| ||||||||  ||||||||  |||||||||||||| |||||    
T  21223658 aaatattcaagaaatagacgttacgtcttcaaaagatttcgaaacaacatgtatatataacattctcaaccatcgcagcggatatatatcat 21223749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 21193099 - 21193191
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||||| || ||| ||||| |||| | |||||||||| |||||   |||||||||||||||||||||||||| ||||    
T  21193099 atattcaagaaatagacgctacgtcatcatacaaaattcaaaacaacatgcatgtataaaaattctcaacagtcgcagcggatataaaccata 21193191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 50002193 - 50002084
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||| ||  || || |||||||| | || | |||||||||| |||||   ||| |||||||||||||||||| | ||    
T  50002193 cgaataatataaatattcaagaaatagtcgtcacgtcatcaacaaaatccaaaacaacatgcatgtataaaaattcccaacagtcgcagcggataaatat 50002094  T
Q  108 catacatctc 117  Q
    ||||||||||    
T  50002093 catacatctc 50002084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 22837801 - 22837757
Alignment:
Q  62 acaacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    ||||||||||| |||||   |||||||||||||||||||||||||    
T  22837801 acaacatgcatgtataaaaatctcaacagtcgcagcggatataaa 22837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 40438563 - 40438495
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataa 78  Q
    |||| |||||||||||||||||||||||||  || || |||||||| | || ||||||  |||||||||    
T  40438563 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaacaacagacatatataa 40438495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 52397586 - 52397654
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataa 78  Q
    |||| ||| ||||||||||| |||||||||||||  | |||||||| |||| || |||||||| |||||    
T  52397586 cgaataatctaaatattcaataaatagacgctacgccatcaacaaaattcaaacgacatgcatgtataa 52397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 122183 - 122003
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    |||||||||||||||||||||| |||| |  ||||  ||| ||||||||||||||||  ||||||||||||||||| ||||| || ||||||||||||||    
T  122183 atattcaagaaatagacgctacgtctttagtaaataacat-caacatgcatatataaaatttctcaacagtcgcagtggatacaattcatacatctccaa 122085  T
Q  121 atatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    ||||||||||| ||||||||||||| |||| |||| | |||||| ||  ||||||||||||||||||| || | |||||||||    
T  122084 atatacatgtcctaagatcaatatatatcatcata-ataatctcaaagtcccgacatatgggcaaaatatcaacaacataaat 122003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 129
Target Start/End: Complemental strand, 106846 - 106735
Alignment:
Q  21 aatattcaagaaatagacgctacatcttca-ac-aaatttcatacaa-catgcatatataattttctcaacagtcgcagcgga-tataaatcatacatct 116  Q
    ||||||||||||||||||||||| || ||| || ||||| || |||| |||||||||||||   ||||||||||||||||||| |||||| |||| |  |    
T  106846 aatattcaagaaatagacgctacgtcatcatacaaaattccaaacaatcatgcatatataa-aatctcaacagtcgcagcggattataaaccatatactt 106748  T
Q  117 ccaaatatacatg 129  Q
    | |||||||||||    
T  106747 caaaatatacatg 106735  T

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Target: scaffold0115 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 19267 - 19455
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaatc 108  Q
    |||| ||||||||||||||||||||||||||||  || |||||||| | || |||||||  |||||| ||  || |||||||| |||||||||||| |||    
T  19267 cgaataatataaatattcaagaaatagacgctatgtcatcaacaaaatccaaacaacatttatatataaaaattatcaacagttgcagcggatatagatc 19366  T
Q  109 atacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||||||||||||| | |||||||||| ||||||| |||||||| |||||||| |||| ||| |||||||||| || |||||||| ||||    
T  19367 atacatctccaaagtctacatgtcatgagatcaaaatacatcatcatataaattctccaaatcccgacatataggtaaaatctcaataa 19455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 11291 - 11468
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttcatacaacatgcatatat--aattttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    ||||||||||||||||||||||| ||||||||||||  ||| ||||||||||||||  || || ||||| || |||||||||||||||||||||||||||    
T  11291 aatattcaagaaatagacgctacgtcttcaacaaataacat-caacatgcatatataaaaattcctcaatagccgcagcggatataaatcatacatctcc 11389  T
Q  119 aaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||| |||||||| ||| |||||||||| ||||| || | |||  ||| ||| ||||||||||||| |||||||| ||||    
T  11390 aaagtatacatgccatgagatcaatatgcatcatcacaaaaatcctccaaatcccgacatatgggtaaaatctcaataa 11468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 34392 - 34244
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataat-tttctcaacagtcgcagcggatataaa 106  Q
    |||| |||||||||||||||||||||||| |||||||||||   | ||||||| |||||||||||||||||  |||||||| | | |||||||||||||     
T  34392 cgaataatataaatattcaagaaatagaccctacatcttcacatctaatttcaaacaacatgcatatataaaatttctcaa-acttgcagcggatataag 34294  T
Q  107 tcatacatctccaaa-tatacatgtcataagatcaatatacatcaacata 155  Q
    |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  34293 tcatacatcttcaaaatatacatatcataagatcaatatacatcaacata 34244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 73477 - 73350
Alignment:
Q  63 caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaa 160  Q
    ||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| ||||||| |||||||| ||||||||     
T  73477 caacatgcatatataaaaattctcaacaatcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaat 73378  T
Q  161 tctctaaagcccgacatatgggcaaaat 188  Q
    |||| ||  ||||||||||||| |||||    
T  73377 tctccaagtcccgacatatgggtaaaat 73350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 7024 - 7201
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcataca-acatgcatatataattt-tctcaacagtcgcagcggatat-aaatcatacatctcc 118  Q
    ||||||||||||||||||||||||||||| ||||   || ||| ||||||||||||||    | ||||||||||||| |||||| |||||||| ||||||    
T  7024 atattcaagaaatagacgctacatcttcagcaaaac-caaacatacatgcatatataaaaaatttcaacagtcgcagtggatatgaaatcatatatctcc 7122  T
Q  119 aaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||| |||||||||||||||||||| |||||||| |||||||| |||| |||  |||||||||||  |||||||| ||||    
T  7123 aaaatatacatgtcataagatcaaaatacatcatcatataaattctccaaattccgacatatggataaaatctcaataa 7201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 23280 - 23167
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatggg 182  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||| |||| |||  | ||||||||||    
T  23280 tcaacagtcgcagtggatataaatcatatatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattctccaaattctgacatatggg 23181  T
Q  183 caaaatctcgataa 196  Q
     |||||||| ||||    
T  23180 taaaatctcaataa 23167  T

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Target: scaffold0088 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 45828 - 45639
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaaca-aatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaat 107  Q
    |||| ||||||||||||||| ||||||||||||| || |||||| || | || ||||||||||||||| ||| |||||||||||||||| ||||||  ||    
T  45828 cgaataatataaatattcaaaaaatagacgctacgtcatcaacataaatccaaacaacatgcatatataaatattctcaacagtcgcagaggatatggat 45729  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    ||||||||| |||| | |||||| ||| ||||||| ||| |||| |||||||| |||  ||  | ||||||||||| |||||||| ||||    
T  45728 catacatcttcaaagtctacatgccatgagatcaaaataaatcatcatataaattcttcaagtctcgacatatgggtaaaatctcaataa 45639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 4976 - 4800
Alignment:
Q  23 tattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctccaa 120  Q
    ||||||||||||||||||||| |||||||||||   || | ||||||||||||||||   |||||||| || |||||||||||| |||||||||||||||    
T  4976 tattcaagaaatagacgctacgtcttcaacaaaaaccaaaacaacatgcatatataaaaattctcaacggttgcagcggatatagatcatacatctccaa 4877  T
Q  121 a-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    | | |||||| ||| | ||||| ||||| || |||| ||| |||| ||| ||||||||||||| |||||||| ||||    
T  4876 agtctacatgccatgaaatcaaaatacaacatcataaaaattctccaaatcccgacatatgggtaaaatctcaataa 4800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 10223 - 10399
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcca 119  Q
    |||||||||||||||| ||||| | |||||||||    | | ||||||||||||||||   |||||||||||||||||||||||| ||||||||||||||    
T  10223 atattcaagaaatagatgctacgtattcaacaaaaacaaaatcaacatgcatatataaaagttctcaacagtcgcagcggatatagatcatacatctcca 10322  T
Q  120 aa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataa 196  Q
    || | |||||| ||| ||||||| |||||||| ||| |||| |||| ||| ||| ||||||||| |||||||| ||||    
T  10323 aagtctacatgccatgagatcaaaatacatcatcat-taaattctccaaatcccaacatatgggtaaaatctcaataa 10399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 4450 - 4583
Alignment:
Q  62 acaacatgcatatataat--tttctcaacagtcgcagcggatataaatcatacatctccaaa--tatacatgtcataagatcaatatacatcaacatata 157  Q
    |||||||||||||||||   |||||||| |||||||||||||||| | ||||||  ||||||  |||||||| ||| | ||||| |||||||  ||||||    
T  4450 acaacatgcatatataaaaatttctcaatagtcgcagcggatatataacatacacttccaaaaatatacatgccatgaaatcaacatacatcgccatata 4549  T
Q  158 aaatctctaaagcccgacatatgggcaaaatctc 191  Q
    ||||||| ||| ||||||||||||| ||||||||    
T  4550 aaatctccaaatcccgacatatgggtaaaatctc 4583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 196
Target Start/End: Complemental strand, 3538 - 3433
Alignment:
Q  92 cgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatct 190  Q
    ||||||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||  ||||||| |||  ||| ||||||||||||| |||||||    
T  3538 cgcagcggatatataacatacatctccaaagtatacatgtcatgagatcaaaatacatcattatataaattcttcaaatcccgacatatgggtaaaatct 3439  T
Q  191 cgataa 196  Q
    | ||||    
T  3438 caataa 3433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 3273 - 3129
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatataattt--tctcaacagtcgcagcggatataaa 106  Q
    |||| |||||||||||| |||||||||||||||| || |||||||| | || | |||||||||| |||||     |||||||||||||||||||||||||    
T  3273 cgaataatataaatattaaagaaatagacgctacgtcatcaacaaaatccaaaacaacatgcatgtataagaaactctcaacagtcgcagcggatataaa 3174  T
Q  107 tcatacatctccaaa-tatacatgtcataagatcaatatacatca 150  Q
     || ||| ||| ||| |||||||||||| | ||||| ||||||||    
T  3173 ccagacacctcaaaagtatacatgtcatgatatcaaaatacatca 3129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 3898 - 4029
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattttc-tcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||||||||||  ||||||   | ||  ||| |||||||||||||||||  ||| |||||||||||| ||||||||| ||||||||| |    
T  3898 aatattcaagaaatagacgctatgtcttcacttccaaaatcaaacaacatgcatatataaaattcatcaacagtcgcaacggatataagtcatacatcac 3997  T
Q  118 caaatatacatgtcataagatcaatatacatc 149  Q
     || |||||||||||||| | ||| |||||||    
T  3998 aaagtatacatgtcataaaaacaacatacatc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 99073 - 99268
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||| ||||| |||| ||| | || |  ||||||||| |||||   ||||||||||| |||||||||||||||    
T  99073 cgaataatataaatattcaagaaatagacgccacatcatcaaaaaaatccaaaataacatgcatgtataaaaattctcaacagttgcagcggatataaat 99172  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaat 203  Q
    |||||| ||| ||| |||||||| ||| | | | | ||| | || |||| ||| |||||||| ||||||| || ||  ||||||| |||||||||||    
T  99173 catacacctcaaaagtatacatgccatgataacgaaatataacatcataaaaattctctaaatcccgaca-attgggtaaatctccataacataaat 99268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 167
Target Start/End: Complemental strand, 16091 - 15939
Alignment:
Q  20 aaatattcaagaaatagacgctacatcttcaacaaatttcata-caacatgcatatata---attttctcaacagtcgcagcggatataaatcatacatc 115  Q
    |||||||||||| ||||||| | | ||||||||| ||| || | |||||||||||||||   | || ||||| |||||||||||||||||| |||||||     
T  16091 aaatattcaagacatagacgtt-cgtcttcaacagattccaaaacaacatgcatatatataaagttcctcaaaagtcgcagcggatataaaacatacata 15993  T
Q  116 tcc-aaatatacatgtcataagatca-atatacatcaacatataaaatctctaa 167  Q
    ||| ||||| |||||||||||  |||   |||||||||||||||||||||||||    
T  15992 tccaaaatacacatgtcataaactcaccaatacatcaacatataaaatctctaa 15939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 15501 - 15406
Alignment:
Q  92 cgcagcggatataaatcatacatctccaaatatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaa 187  Q
    |||| |||||||| | ||||||||||||| ||||||||||||||  || | ||||||||| | |||||||||| ||| ||||||| ||||| ||||    
T  15501 cgcatcggatatatagcatacatctccaagtatacatgtcataaactccaaatacatcaatacataaaatctccaaatcccgacacatgggtaaaa 15406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 12624 - 12522
Alignment:
Q  95 agcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcga 193  Q
    |||| ||||| | |||||||||||||| ||||||||||||  |||||| |||||||| |||||||| |||| ||| |||| |||||||| |||||||| |    
T  12624 agcgtatatatagcatacatctccaaagtatacatgtcatcggatcaaaatacatcatcatataaattctcaaaatcccggcatatgggtaaaatctcaa 12525  T
Q  194 taa 196  Q
    |||    
T  12524 taa 12522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 7132 - 7034
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaac-aaatttcatacaacatgcatatat-aattttctcaacagtcgcagcggatataaa 106  Q
    |||| ||||||||||||||||||||||||||||| || ||||| ||||   | ||||||||||| ||| |||||| |||||||| ||||||||||||||    
T  7132 cgaataatataaatattcaagaaatagacgctacttcatcaacgaaatgcaaaacaacatgcatgtataaattttttcaacagttgcagcggatataaa 7034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 35860 - 35981
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||| ||||| |||||||| | | | ||||||||||| ||| ||  ||||||||||| |||||||||||||| |||||| |||     
T  35860 aatattcaagaaatagacgccacatcatcaacaaaatccaaaacaacatgcatgtataaaaattctcaacagttgcagcggatataaaccatacacctca 35959  T
Q  119 aaa-tatacatgtcataagatc 139  Q
    ||| |||||||| ||| |||||    
T  35960 aaagtatacatgacatgagatc 35981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 505 - 604
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttc-aacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||| ||||||||||||||||||| || |||||| | | | ||||||||||||||| ||  ||||||||||| |||||||||||||| ||||    
T  505 aatataaatattgaagaaatagacgctacatcatcaaacaaaatccaaaacaacatgcatatataaacgttctcaacagttgcagcggatataaaccata 604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 22723 - 22612
Alignment:
Q  92 cgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctctaaagcccgacatatgggcaaaatct 190  Q
    |||| |||||||| | |||||||||||||| ||||||||||||||  |||| ||| ||||| | |||||||||  ||| ||||||| || |||||||||     
T  22723 cgcaacggatatatagcatacatctccaaagtatacatgtcataaactcaaaatatatcaatacataaaatcttcaaaacccgacaaataggcaaaatcc 22624  T
Q  191 cgataacataaa 202  Q
    | ||||||||||    
T  22623 ccataacataaa 22612  T

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Target: scaffold0073 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 49429 - 49609
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattt--tctcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||||| |||  ||||||   |||| |||| |||||||||||||||||     |||||||||||||||||||||||| |||||  ||||    
T  49429 atattcaagaaatagaccctatgtcttcacatcaaaattcaaacaacatgcatatataagaaaatctcaacagtcgcagcggatataattcatatgtctc 49528  T
Q  118 c-aaatatacatgtcataagatcaatatacatcaacatataaaatc-tctaaagcccgacatatgggcaaaatctcgataa 196  Q
    | ||||| | ||| ||| | ||||| |||||||| || | ||| || || ||| ||||||||||||| |||||||| ||||    
T  49529 caaaatacatatgccatgatatcaaaatacatcatcagaaaaattcttcaaaatcccgacatatgggtaaaatctcaataa 49609  T

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Target: scaffold0073; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 53960 - 54140
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa--caaatttcatacaacatgcatatataattt--tctcaacagtcgcagcggatataaatcatacatctc 117  Q
    ||||||||||||||||| |||  ||||||   |||| |||| |||||||||||||||||     |||||||||||||||||||||||| |||||  ||||    
T  53960 atattcaagaaatagaccctatgtcttcacatcaaaattcaaacaacatgcatatataagaaaatctcaacagtcgcagcggatataattcatatgtctc 54059  T
Q  118 c-aaatatacatgtcataagatcaatatacatcaacatataaaatc-tctaaagcccgacatatgggcaaaatctcgataa 196  Q
    | ||||| | ||| ||| | ||||| |||||||| || | ||| || || ||| ||||||||||||| |||||||| ||||    
T  54060 caaaatacatatgccatgatatcaaaatacatcatcagaaaaattcttcaaaatcccgacatatgggtaaaatctcaataa 54140  T

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Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 26263 - 26158
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatata-attttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||||||||||||||||  ||||| |||||||| | | | ||||||||||| |||| |  || |||||||||||||| ||||||||     
T  26263 cgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccaaaacaacatgcatgtatacaaattttcaacagtcgcagcagatataaac 26164  T
Q  108 cataca 113  Q
    ||||||    
T  26163 cataca 26158  T

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Target: scaffold0219; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 26140 - 26062
Alignment:
Q  84 tcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaat 161  Q
    |||||||||||||| |||||||| |||||| ||| ||| |||||||||||| | ||||| |||||||| |||| |||||    
T  26140 tcaacagtcgcagcagatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaaaat 26062  T

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Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 29042 - 29134
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa-caaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||||| || |||| |||| |||| |  ||||||||||  ||||   ||||||||||||||||||||||||||||||    
T  29042 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcagcggatataaatcata 29134  T

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Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 123598 - 123523
Alignment:
Q  81 ttctcaacagtcgcagcggatataaatcatacatctccaaa-tatacatgtcataagatcaatatacatcaacata 155  Q
    ||||||| ||| ||||| ||||||||||||||| ||| ||| |||||||||||| ||||||| |||||||| ||||    
T  123598 ttctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcata 123523  T

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Target: scaffold0236 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 25604 - 25517
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttcata--caacatgcatatataattttctcaacagtcgcagcggatataaa 106  Q
    ||||||||||||||||||||||||| ||| ||||| |||| |  ||||||||||  ||||   |||||||||||||||||||||||||    
T  25604 atattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgcataaaaatctcaacagtcgcagcggatataaa 25517  T

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Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 103922 - 104041
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatat-aattttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||| || ||||||| ||| | | | ||||||||||| ||| ||  ||||||||||| ||||||||||| || |||||| |||     
T  103922 aatattcaagaaatagacgccacgtcttcaataaaatccaaaacaacatgcatgtataaaaattctcaacagttgcagcggatat-aaccatacacctca 104020  T
Q  119 aaatatacatgtcataagatc 139  Q
    ||||||||||| ||| |||||    
T  104021 aaatatacatgccatgagatc 104041  T

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Target: scaffold0258 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 8231 - 8335
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaaca-aatttcatacaacatgcatatataattttctcaacagtcgcagcggatataaatc 108  Q
    |||| |||| |||||||||||||||||||| ||| ||||||| | | ||||| |||||||||||| | || ||  |||||||||||| | |||||| |||    
T  8231 cgaataatacaaatattcaagaaatagacgttacgtcttcaaaagattttcaaacaacatgcataaaaaaatt--tcaacagtcgcatcagatatatatc 8328  T
Q  109 atacatc 115  Q
    |||||||    
T  8329 atacatc 8335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 255
Target Start/End: Original strand, 8329 - 8430
Alignment:
Q  143 atacatcaacatataaaatctctaaagcccgacatatgggcaaaatctcgataacataaattcaacataatcaatctcgaataatcataaagacaaacat 242  Q
    |||||||| ||||||||||||| ||| ||||||||||||| || |||||   |||||        || ||||||||| |||||| |||||||||| ||||    
T  8329 atacatcaccatataaaatctccaaatcccgacatatgggtaatatctc---aacat--------cacaatcaatctagaataaacataaagacatacat 8417  T
Q  243 cctagatcagagc 255  Q
    |||||||||||||    
T  8418 cctagatcagagc 8430  T

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Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 99426 - 99335
Alignment:
Q  22 atattcaagaaatagacgctacatcttc-aacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    |||||||||||||||||||||| || || |||||| | | | ||||||||||| |||||   ||||||||||||||||||||||||| ||||    
T  99426 atattcaagaaatagacgctacgtcatcaaacaaaatccaaaacaacatgcatgtataaaaatctcaacagtcgcagcggatataaaccata 99335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 4685 - 4795
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttc-atacaacatgcatatataattttctcaacagtcgcagcgga-tataaatcatacatctcc 118  Q
    |||||||||||||||||||||| || ||| ||||||| | | ||||||||||| |||||   |||||||||||||||| || ||||||||||| |  ||     
T  4685 atattcaagaaatagacgctacgtcatcacacaaattccaaaacaacatgcatgtataaaaatctcaacagtcgcagcagattataaatcatataattca 4784  T
Q  119 aaatatacatg 129  Q
    |||||||||||    
T  4785 aaatatacatg 4795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 129
Target Start/End: Original strand, 3218 - 3328
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttcata-caacatgcatatataattttctcaacagtcgcagcgga-tataaatcatacatctcc 118  Q
    |||||||||||||||||||| | || ||| ||||||| || | |||||||||| |||||   ||||||||||||||||||| ||||||||||| |  ||     
T  3218 atattcaagaaatagacgcttcgtcatcacacaaattccaaaacaacatgcatgtataaaaatctcaacagtcgcagcggattataaatcatataattca 3317  T
Q  119 aaatatacatg 129  Q
    |||||||||||    
T  3318 aaatatacatg 3328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 16202 - 16294
Alignment:
Q  22 atattcaagaaatagacgctacatcttca-acaaatttc-atacaacatgcatatataattttctcaacagtcgcagcgga-tataaatcata 111  Q
    |||||||||||||||||||||| || ||| ||||||| | | ||||||| ||| |||||   ||||||||||||||||||| |||||||||||    
T  16202 atattcaagaaatagacgctacgtcatcacacaaattccaaaacaacatacatgtataaaaatctcaacagtcgcagcggattataaatcata 16294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 3919 - 3798
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaacaaatttc-atacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatacatctcc 118  Q
    |||||||||||||||||||  || || |||||||| | | | ||||||||||| |||||   ||||||||||| ||||| |||||||| |||||| |||     
T  3919 aatattcaagaaatagacgtcacgtcatcaacaaaatcctaaacaacatgcatgtataaaaattctcaacagttgcagcagatataaaccatacacctca 3820  T
Q  119 aaa-tatacatgtcataagatc 139  Q
    ||| |||||||||||| |||||    
T  3819 aaagtatacatgtcatgagatc 3798  T

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Target: scaffold0107 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 111
Target Start/End: Original strand, 11375 - 11467
Alignment:
Q  22 atattcaagaaatagacgctacatcttcaa--caaatttcata-caacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||||||||||||||||| ||||| ||||  |||| | || | |||||||||| |||||   ||||||||||||||||||||||||| ||||    
T  11375 atattcaagaaatagacgccacatcatcaattcaaaatccaaaacaacatgcatgtataaaaatctcaacagtcgcagcggatataaaccata 11467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 199584 - 199487
Alignment:
Q  16 atataaatattcaagaaatagacgctacatcttc-aacaaatttc-atacaacatgcatatataattttctcaacagtcgcagcggatataaatcata 111  Q
    ||||| |||||||||||||||||||||| || || |||||| | | | ||||||||||| |||||   | ||||||||||||||||||||||| ||||    
T  199584 atatatatattcaagaaatagacgctacgtcatcaaacaaaatccaaaacaacatgcatgtataaaaatgtcaacagtcgcagcggatataaaacata 199487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 14350 - 14250
Alignment:
Q  15 aatataaatattcaagaaatagacgctacatcttcaa-caaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcatac 112  Q
    |||| |||||||||||||||||||||  | || |||| |||| | || |||||| ||||||||||   ||||||||||| |||||||||||||| |||||    
T  14350 aatagaaatattcaagaaatagacgcctcgtcatcaaacaaaatccaaacaacaggcatatataaaaattctcaacagttgcagcggatataaaccatac 14251  T
Q  113 a 113  Q
    |    
T  14250 a 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 2208 - 2114
Alignment:
Q  21 aatattcaagaaatagacgctacatcttcaa-caaatttcatacaacatgcatatataatt-ttctcaacagtcgcagcggatataaatcataca 113  Q
    ||||||||||||||||| ||||| || |||| |||| | || |||||| ||||||||||   ||||||||||| | |||||||||||| ||||||    
T  2208 aatattcaagaaatagatgctacgtcatcaaacaaaatccaaacaacaggcatatataaaaattctcaacagttgtagcggatataaaccataca 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 1246 - 1279
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctac 43  Q
    |||| |||||||||||||||||||||||||||||    
T  1246 cgaataatataaatattcaagaaatagacgctac 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 164
Target Start/End: Complemental strand, 11247 - 11090
Alignment:
Q  10 cgaagaatataaatattcaagaaatagacgctacatcttcaacaaatttcatac-aacatgcatatataatt-ttctcaacagtcgcagcggatataaat 107  Q
    |||| |||||||||||| ||| ||||||  | || || |||||||| | || || ||||||||| |||||   ||||||||||| ||| ||||||||||     
T  11247 cgaataatataaatatttaagtaatagattccacgtcatcaacaaaatccaaaccaacatgcatgtataaaaattctcaacagttgcaacggatataaac 11148  T
Q  108 catacatctccaaa-tatacatgtcataagatcaatatacatcaacatataaaatctc 164  Q
    |||||| ||  ||| |||||||||||| | ||||| |||||||| |||| ||| ||||    
T  11147 catacacctaaaaagtatacatgtcatgatatcaaaatacatcatcataaaaattctc 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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