View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_55 (Length: 247)
Name: NF2747_high_55
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 35338904 - 35339143
Alignment:
| Q |
1 |
aaactcaactcctcttttggaaaaaagtacatgtttgaaatatttggagaatttggtttatctataacttgttgcggcacaatgagatttctcatgagat |
100 |
Q |
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| T |
35338904 |
aaactcaactcctcttttggaaaaaagtacatgtttgaaatatttggagaatttggtttatctataacttgttgcggcacaatgagatttctcatgagat |
35339003 |
T |
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| Q |
101 |
atataacaactagaattaaaatcaaagaaacaacactaacaatagctgcaactatagctagaatttttcctagtttatttggaggtgagtgtgatggtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35339004 |
atataacaactagaattaaaatcaaagaaacaacactaacaatagctgcaactatagctagaatttttcctagtttatttggaggtgagtgtgatggtga |
35339103 |
T |
|
| Q |
201 |
ctttggacaagggacaaggtgtcctccacaaagacctttg |
240 |
Q |
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|||||||||||||||||||| ||||||||| ||||||||| |
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| T |
35339104 |
ctttggacaagggacaaggtttcctccacagagacctttg |
35339143 |
T |
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