View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_64 (Length: 229)
Name: NF2747_high_64
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_64 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 35026146 - 35025916
Alignment:
| Q |
1 |
ccatggttgatacaagaatgtaatgaactagggacaaagctatataaat-tatatatgtagatgtgtgtgtgtataagttcaattatattctatgatttt |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
35026146 |
ccatggttgatacaagaatgtaatgaactagggacaaagctatacaaatatatatatgtagatgtgtgtgtgtgtaagttcaattatattctatgatttt |
35026047 |
T |
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| Q |
100 |
tgaaattt-gatgtgtaatgttgttctaccaaaataaaaattgatgtataatgttccttaagtataactcaaatggtaaaaagctatatagatatttgat |
198 |
Q |
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|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
35026046 |
tgaaattttgatgtgtaaggttgttctaccaaaataaaaattgatgtataatgttccgtaagtataactcaaatggtaaaaagctatatagatatttgat |
35025947 |
T |
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| Q |
199 |
atatttaagagataatttgaatctgttatac |
229 |
Q |
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|||||||||||||||||||||| ||| |||| |
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| T |
35025946 |
atatttaagagataatttgaatatgtaatac |
35025916 |
T |
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