View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2747_high_66 (Length: 225)
Name: NF2747_high_66
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2747_high_66 |
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Alignment Details
Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 1051675 - 1051506
Alignment:
| Q |
9 |
tgtggtacgatttctccatcttatcgtcgttcacattttgtcataaatttttgtggttgtaatgcattgcatcattcacaaacttattttttaaaattga |
108 |
Q |
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| T |
1051675 |
tgtggtacgatttctccatcttatcgtcattcacattttgtcatgaatttttgtggttgtaatgcattgcatcattcacaaactaatttttcaaaattga |
1051576 |
T |
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| Q |
109 |
atcaataaatcttatcatattgcatcgcatcaatcattgaaattgacctaatgaagacgatctctaaaat |
178 |
Q |
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| T |
1051575 |
atcaataaatcttatcatattgcatcgcgtcaatcgttgaaattgactcaatgaagatgatctctaaaat |
1051506 |
T |
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