View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2747_low_3 (Length: 658)

Name: NF2747_low_3
Description: NF2747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2747_low_3
NF2747_low_3
[»] chr1 (38 HSPs)
chr1 (268-647)||(778388-778756)
chr1 (323-444)||(45813011-45813133)
chr1 (323-444)||(20754-20876)
chr1 (333-447)||(9385744-9385857)
chr1 (323-444)||(28455880-28456002)
chr1 (323-444)||(32007080-32007202)
chr1 (323-444)||(5055788-5055910)
chr1 (323-417)||(7059501-7059595)
chr1 (323-444)||(41808208-41808330)
chr1 (123-179)||(778888-778944)
chr1 (323-444)||(26032804-26032929)
chr1 (323-444)||(29994383-29994505)
chr1 (330-443)||(39276357-39276471)
chr1 (323-444)||(48660028-48660150)
chr1 (329-444)||(41761417-41761533)
chr1 (323-390)||(4066022-4066089)
chr1 (323-441)||(5943690-5943809)
chr1 (328-411)||(39284330-39284413)
chr1 (323-390)||(41039303-41039370)
chr1 (323-389)||(3716424-3716490)
chr1 (323-417)||(13109804-13109898)
chr1 (328-388)||(26264541-26264601)
chr1 (321-444)||(49783713-49783837)
chr1 (328-376)||(13183181-13183229)
chr1 (323-377)||(192489-192543)
chr1 (328-390)||(35945858-35945920)
chr1 (328-390)||(50106201-50106263)
chr1 (323-412)||(13097343-13097432)
chr1 (340-377)||(16770173-16770210)
chr1 (336-376)||(3716686-3716726)
chr1 (328-411)||(7275721-7275804)
chr1 (323-378)||(9886892-9886947)
chr1 (323-390)||(35110099-35110166)
chr1 (328-377)||(21939016-21939065)
chr1 (329-369)||(11688345-11688385)
chr1 (344-384)||(32982371-32982411)
chr1 (349-389)||(38817225-38817265)
chr1 (350-390)||(46447404-46447444)
[»] chr7 (49 HSPs)
chr7 (323-444)||(32606330-32606452)
chr7 (323-444)||(23358191-23358313)
chr7 (323-444)||(25112247-25112369)
chr7 (330-444)||(27229484-27229600)
chr7 (323-444)||(4106744-4106866)
chr7 (323-444)||(25872769-25872891)
chr7 (323-444)||(31770532-31770654)
chr7 (323-444)||(40058244-40058366)
chr7 (323-444)||(47557787-47557909)
chr7 (328-444)||(44083946-44084063)
chr7 (323-437)||(4107322-4107437)
chr7 (323-444)||(27915580-27915703)
chr7 (323-444)||(2146642-2146764)
chr7 (323-444)||(25546275-25546397)
chr7 (323-444)||(43170939-43171061)
chr7 (323-444)||(47250251-47250373)
chr7 (323-417)||(47570718-47570812)
chr7 (323-388)||(5462950-5463015)
chr7 (323-388)||(11355886-11355951)
chr7 (323-388)||(38781208-38781273)
chr7 (344-447)||(46427363-46427467)
chr7 (330-417)||(5772826-5772913)
chr7 (323-417)||(8439112-8439206)
chr7 (323-417)||(39513983-39514077)
chr7 (328-444)||(43753758-43753876)
chr7 (323-417)||(48146787-48146881)
chr7 (323-373)||(48444152-48444202)
chr7 (336-377)||(34763516-34763557)
chr7 (338-444)||(13887177-13887282)
chr7 (324-368)||(17753060-17753104)
chr7 (323-447)||(7162790-7162913)
chr7 (323-373)||(19630668-19630718)
chr7 (323-389)||(28603073-28603139)
chr7 (323-389)||(40657591-40657657)
chr7 (321-374)||(31288222-31288275)
chr7 (328-377)||(38033803-38033852)
chr7 (322-390)||(42081618-42081683)
chr7 (344-405)||(43203352-43203413)
chr7 (349-417)||(7298151-7298219)
chr7 (323-390)||(10220473-10220539)
chr7 (323-390)||(41183876-41183943)
chr7 (327-389)||(18506280-18506341)
chr7 (330-443)||(29484762-29484876)
chr7 (323-389)||(35577876-35577942)
chr7 (347-417)||(47960979-47961049)
chr7 (323-435)||(5587295-5587408)
chr7 (323-435)||(5592256-5592369)
chr7 (328-373)||(15634884-15634929)
chr7 (330-374)||(25049965-25050009)
[»] scaffold0032 (1 HSPs)
scaffold0032 (323-444)||(56487-56609)
[»] chr6 (21 HSPs)
chr6 (323-444)||(2959155-2959277)
chr6 (323-444)||(33621500-33621622)
chr6 (323-434)||(4464143-4464255)
chr6 (330-444)||(33704222-33704337)
chr6 (323-417)||(21037325-21037418)
chr6 (323-388)||(29009650-29009715)
chr6 (330-399)||(7613355-7613425)
chr6 (349-444)||(12252029-12252125)
chr6 (323-444)||(21000698-21000820)
chr6 (323-444)||(28322938-28323060)
chr6 (323-377)||(35218640-35218694)
chr6 (323-378)||(28592128-28592183)
chr6 (329-388)||(32289408-32289467)
chr6 (323-377)||(19145544-19145598)
chr6 (323-444)||(24619079-24619201)
chr6 (347-447)||(32353965-32354065)
chr6 (323-399)||(361063-361139)
chr6 (353-444)||(11572014-11572106)
chr6 (331-374)||(10999416-10999459)
chr6 (328-388)||(7014315-7014375)
chr6 (323-399)||(22576233-22576309)
[»] chr8 (35 HSPs)
chr8 (323-444)||(45264640-45264761)
chr8 (323-444)||(70523-70645)
chr8 (323-444)||(6602518-6602640)
chr8 (323-444)||(6677971-6678093)
chr8 (323-444)||(32333120-32333242)
chr8 (330-405)||(5385384-5385459)
chr8 (323-417)||(1078648-1078742)
chr8 (323-444)||(28817262-28817384)
chr8 (323-444)||(35779497-35779619)
chr8 (323-444)||(39303315-39303438)
chr8 (323-417)||(1340-1434)
chr8 (323-444)||(7792667-7792789)
chr8 (328-398)||(7813375-7813445)
chr8 (323-444)||(42192639-42192761)
chr8 (323-400)||(13891141-13891218)
chr8 (323-444)||(10963242-10963362)
chr8 (323-444)||(4530982-4531104)
chr8 (323-417)||(42885208-42885302)
chr8 (328-377)||(31532130-31532179)
chr8 (328-444)||(40911227-40911343)
chr8 (323-411)||(3822436-3822524)
chr8 (353-444)||(18386714-18386806)
chr8 (328-411)||(7403700-7403782)
chr8 (323-390)||(39435343-39435410)
chr8 (338-388)||(44124089-44124139)
chr8 (344-444)||(18752347-18752448)
chr8 (323-388)||(31695269-31695334)
chr8 (328-444)||(41849237-41849353)
chr8 (328-373)||(9292096-9292141)
chr8 (323-367)||(29425435-29425479)
chr8 (323-390)||(31969720-31969787)
chr8 (328-374)||(20269607-20269653)
chr8 (328-374)||(21056236-21056282)
chr8 (371-435)||(22203715-22203780)
chr8 (345-373)||(42364724-42364752)
[»] scaffold1348 (1 HSPs)
scaffold1348 (323-444)||(862-984)
[»] scaffold0119 (2 HSPs)
scaffold0119 (323-444)||(13951-14073)
scaffold0119 (323-444)||(19631-19753)
[»] chr5 (24 HSPs)
chr5 (323-444)||(13203963-13204085)
chr5 (323-444)||(28591350-28591472)
chr5 (323-444)||(2970990-2971112)
chr5 (323-444)||(4824939-4825061)
chr5 (323-444)||(21018229-21018351)
chr5 (323-444)||(35317697-35317819)
chr5 (323-390)||(31909385-31909452)
chr5 (323-417)||(29265909-29266003)
chr5 (344-444)||(1191561-1191662)
chr5 (336-444)||(27721437-27721546)
chr5 (323-444)||(2786277-2786398)
chr5 (323-444)||(21112055-21112177)
chr5 (323-377)||(32143414-32143468)
chr5 (323-444)||(8734002-8734125)
chr5 (323-389)||(23262606-23262672)
chr5 (344-397)||(17984763-17984816)
chr5 (323-388)||(35545996-35546061)
chr5 (336-388)||(6021055-6021107)
chr5 (323-390)||(12257417-12257484)
chr5 (338-373)||(19181789-19181824)
chr5 (328-373)||(40177702-40177747)
chr5 (336-376)||(3386906-3386946)
chr5 (323-383)||(28423242-28423302)
chr5 (328-392)||(41580080-41580144)
[»] chr4 (48 HSPs)
chr4 (323-444)||(34739286-34739408)
chr4 (323-444)||(45874061-45874183)
chr4 (323-444)||(53457830-53457952)
chr4 (323-444)||(1173957-1174079)
chr4 (323-444)||(12867847-12867969)
chr4 (323-444)||(26424858-26424979)
chr4 (323-444)||(28798388-28798510)
chr4 (323-417)||(29581044-29581137)
chr4 (323-444)||(43139906-43140028)
chr4 (329-444)||(238464-238580)
chr4 (323-444)||(19849503-19849625)
chr4 (323-444)||(22607991-22608113)
chr4 (336-444)||(55214658-55214767)
chr4 (336-447)||(41679377-41679489)
chr4 (323-444)||(18257335-18257457)
chr4 (323-444)||(54768432-54768554)
chr4 (328-417)||(23710338-23710427)
chr4 (323-399)||(1966602-1966678)
chr4 (323-442)||(23417483-23417603)
chr4 (330-390)||(50033443-50033503)
chr4 (323-390)||(12735492-12735559)
chr4 (347-441)||(2075515-2075609)
chr4 (347-417)||(22910281-22910351)
chr4 (347-417)||(22968171-22968241)
chr4 (338-388)||(50035955-50036005)
chr4 (323-376)||(51287676-51287730)
chr4 (322-411)||(16555347-16555436)
chr4 (336-373)||(23532125-23532162)
chr4 (323-376)||(31015057-31015110)
chr4 (344-417)||(37134082-37134155)
chr4 (336-417)||(37395658-37395739)
chr4 (336-377)||(39807918-39807959)
chr4 (328-411)||(19814145-19814228)
chr4 (347-444)||(2864772-2864870)
chr4 (323-412)||(52768301-52768389)
chr4 (330-390)||(19673936-19673996)
chr4 (336-404)||(24417891-24417959)
chr4 (336-434)||(32778141-32778238)
chr4 (336-376)||(52172003-52172043)
chr4 (347-390)||(12767148-12767191)
chr4 (323-390)||(33770629-33770696)
chr4 (328-374)||(1125964-1126010)
chr4 (336-378)||(41001535-41001577)
chr4 (323-444)||(11277988-11278106)
chr4 (329-390)||(37620678-37620739)
chr4 (344-373)||(44369936-44369965)
chr4 (330-374)||(48822890-48822934)
chr4 (323-371)||(50347329-50347377)
[»] chr3 (31 HSPs)
chr3 (323-444)||(7824454-7824576)
chr3 (323-444)||(29689482-29689604)
chr3 (329-444)||(55018040-55018156)
chr3 (328-434)||(9349681-9349788)
chr3 (323-444)||(4601431-4601553)
chr3 (323-444)||(54151681-54151803)
chr3 (323-444)||(54158272-54158394)
chr3 (323-444)||(28844510-28844633)
chr3 (323-444)||(42392805-42392927)
chr3 (323-444)||(43247650-43247772)
chr3 (323-444)||(51665925-51666047)
chr3 (323-390)||(52500899-52500966)
chr3 (323-435)||(3112995-3113108)
chr3 (323-435)||(36228994-36229107)
chr3 (323-417)||(475281-475374)
chr3 (323-373)||(27230744-27230794)
chr3 (330-392)||(32001431-32001493)
chr3 (323-393)||(55320400-55320469)
chr3 (328-417)||(38257308-38257397)
chr3 (323-447)||(43775226-43775351)
chr3 (328-388)||(40756732-40756792)
chr3 (323-444)||(29750627-29750748)
chr3 (323-444)||(51054707-51054829)
chr3 (328-444)||(1778857-1778974)
chr3 (348-444)||(35461504-35461601)
chr3 (336-388)||(448888-448940)
chr3 (345-377)||(33334682-33334714)
chr3 (323-444)||(50729530-50729652)
chr3 (323-444)||(50783197-50783319)
chr3 (328-390)||(7958630-7958692)
chr3 (328-390)||(8151409-8151471)
[»] chr2 (31 HSPs)
chr2 (323-444)||(10639606-10639728)
chr2 (323-444)||(23839865-23839987)
chr2 (323-444)||(33083554-33083676)
chr2 (339-444)||(40786225-40786331)
chr2 (323-444)||(11459721-11459843)
chr2 (323-444)||(26605630-26605752)
chr2 (323-444)||(34460375-34460497)
chr2 (323-435)||(37197610-37197723)
chr2 (323-444)||(11816550-11816673)
chr2 (323-444)||(39831444-39831565)
chr2 (340-444)||(16654369-16654474)
chr2 (328-447)||(15782593-15782712)
chr2 (323-438)||(43778468-43778584)
chr2 (323-444)||(7275886-7276009)
chr2 (323-444)||(39535534-39535656)
chr2 (323-444)||(45125165-45125287)
chr2 (328-444)||(11708684-11708801)
chr2 (323-435)||(38440197-38440310)
chr2 (323-390)||(29659218-29659285)
chr2 (323-444)||(19048760-19048882)
chr2 (323-444)||(19537313-19537435)
chr2 (329-390)||(4851381-4851442)
chr2 (323-444)||(27137918-27138039)
chr2 (323-376)||(42578243-42578296)
chr2 (328-444)||(43684075-43684192)
chr2 (323-444)||(19816226-19816348)
chr2 (323-377)||(33001776-33001830)
chr2 (328-389)||(4800938-4800999)
chr2 (323-387)||(21312269-21312331)
chr2 (344-376)||(12366803-12366835)
chr2 (330-444)||(34239827-34239942)
[»] scaffold0044 (1 HSPs)
scaffold0044 (323-444)||(9973-10095)
[»] scaffold0053 (1 HSPs)
scaffold0053 (323-435)||(22178-22291)
[»] scaffold0352 (1 HSPs)
scaffold0352 (323-390)||(8943-9010)
[»] scaffold0038 (1 HSPs)
scaffold0038 (323-444)||(114258-114380)
[»] scaffold0067 (1 HSPs)
scaffold0067 (323-444)||(34824-34947)
[»] scaffold0360 (1 HSPs)
scaffold0360 (335-390)||(14728-14785)


Alignment Details
Target: chr1 (Bit Score: 208; Significance: 1e-113; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 268 - 647
Target Start/End: Complemental strand, 778756 - 778388
Alignment:
Q  268 attttatcctcatattttggaaaaaccttaattttgctctctannnnnnnnnnccgtctaagatgaattggtaattcactgaaattaaactcacacacaa 367  Q
    |||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||||||||||||||    
T  778756 attttatcctcatattttggaaaaaccttaattttgctctctattttttttt-ccgtcttagatgaattggtaattcactgaaattaaactcacacacaa 778658  T
Q  368 ctgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaattcggtatttgtcagttgagttaggacttttaa-cttttgctctcttttcta 466  Q
    |||| |||||  |||||||||||||||||||| ||| |||||||||||||||| ||||  |||||||| ||| |||| ||| ||||||||||||||||||    
T  778657 ctgtcaggtcctaggttcgaacctgagtcacgacgttcgaccttgtaattcggcattttccagttgagctagaacttctaaacttttgctctcttttcta 778558  T
Q  467 attgcccaaatttggtcttccggttcaannnnnnnnnnnnnnnnnnnatcaattcatgattttgatcatccgacgacgttgtagtaaattgttcgcgtcc 566  Q
    |||||||||||||||||||| | |||||                   |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  778557 attgcccaaatttggtcttctgtttcaatttttttt-----------atcaattcatgattttgatcatccgatgacgttgtagtaaattgttcgcgtcc 778469  T
Q  567 agtccattgtattattctcattgatctttttaagatctctacgattgaccttgagccctcgattcaatttaacatcctttg 647  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  778468 agtccattgtattattctcattgatctttttaagatctctaagattgaccttgagccctcaattcaatttaacatcctttg 778388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 45813011 - 45813133
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | ||||||  ||||||||||| || |||||     
T  45813011 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgatgtccgaccttgcaatttcggc 45813110  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||| ||||||||    
T  45813111 atttgtcagttgagctaggactt 45813133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 20876 - 20754
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||| ||| ||||||||||||||||||||||||| | |||||||| | | ||||||||||||  ||||| || |||||     
T  20876 gtcttagatgaagtggtaatccactaaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacggcgtcctgccttgcaatttcggc 20777  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||||||||||||    
T  20776 atttgccagttgagttaggactt 20754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 9385857 - 9385744
Alignment:
Q  333 aattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaattcggtatttgtcagtt 432  Q
    ||||||||||||||| |||||||||  ||| |||||||||||||| |  ||| ||||| | |||||| |||||||||||||||||||| ||||| |||||    
T  9385857 aattggtaattcactaaaattaaaccgacatacaactgtgaggtcccgcgtttgaacccg-gtcacgacgtccgaccttgtaattcggcatttgccagtt 9385759  T
Q  433 gagttaggactttta 447  Q
     ||||||||||||||    
T  9385758 aagttaggactttta 9385744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 28456002 - 28455880
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || |||||     
T  28456002 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28455903  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  28455902 atttgccagttgagctaggactt 28455880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 32007202 - 32007080
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  32007202 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 32007103  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  32007102 atttgccagttgagctaggactt 32007080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 5055788 - 5055910
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  5055788 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 5055887  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| ||| |||| ||||||||    
T  5055888 atttgccagctgagctaggactt 5055910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 7059595 - 7059501
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| |||| || ||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| | |||||| |||| ||||||| ||||    
T  7059595 gtcttagataaagtggtaatccacttaaattaaactcacacacaactgtgaggtctcagattcgaacccgggtcacgacgtctgaccttgcaatt 7059501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 41808330 - 41808208
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||  | |||||||||| | |||| | |||||| ||||| || |||||     
T  41808330 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 41808231  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  41808230 atttgccagttgagctaggactt 41808208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 778944 - 778888
Alignment:
Q  123 tttttatgaataaaaagcagataaggaatttttaaaagtaatagggaacttttcaaa 179  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  778944 tttttatgtataaaaagcagataagaaatttttaaaagtaatagggaacttttcaaa 778888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 26032929 - 26032804
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgt---ccgaccttgtaa-ttc 418  Q
    |||| |||||||  |||||| ||||||||||||||||||||| |||||||||||  |||||||||||| | |||||| |||   ||||||||  || |||    
T  26032929 gtcttagatgaagcggtaatccactgaaattaaactcacacaaaactgtgaggttccaggttcgaacccgggtcacgacgtccgccgaccttacaatttc 26032830  T
Q  419 ggtatttgtcagttgagttaggactt 444  Q
    || ||||||||||||| |||||||||    
T  26032829 ggcatttgtcagttgaattaggactt 26032804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 29994383 - 29994505
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||| ||||||||||| |||||||||| |  ||| | |||| | ||||| || |||||     
T  29994383 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtctcgggttcgaacccggatcatgacgtctggccttgcaatttcggc 29994482  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  29994483 atttgccagttgagctaggactt 29994505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 39276471 - 39276357
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtc 428  Q
    ||||| ||||||| |||||||| |||||||||||| |||||||||||| | |||||||||| | |||||  |||||| ||||| || ||||| ||||| |    
T  39276471 atgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttgcc 39276372  T
Q  429 agttgagttaggact 443  Q
    ||||||| |||||||    
T  39276371 agttgagctaggact 39276357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 48660150 - 48660028
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||| | ||||   |||||| ||||| || |||||     
T  48660150 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcataacgtccggccttgcaatttcggc 48660051  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  48660050 atttgccagttgagctaggactt 48660028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 329 - 444
Target Start/End: Original strand, 41761417 - 41761533
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgt 427  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||||||   |||||||||| | |||||  |||||| ||||| || ||||| |||||     
T  41761417 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttgcaatttcggcatttgc 41761516  T
Q  428 cagttgagttaggactt 444  Q
    |||||||  ||||||||    
T  41761517 cagttgaactaggactt 41761533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 4066089 - 4066022
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||| ||||||||    
T  4066089 gtcttagatgaagtggtaattcactgaaattaaactcacatacaattgtaaggtctcagattcgaacc 4066022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 441
Target Start/End: Complemental strand, 5943809 - 5943690
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| || |||| || |||||||||||||||| ||||||||||||||    ||||||||| | |||||| |||||| ||||| || |||||     
T  5943809 gtcttagatgaagtgataatccattgaaattaaactcacaaacaactgtgaggtcctgagttcgaacccgggtcacgacgtccggccttgcaatttcggc 5943710  T
Q  422 atttgtcagttgagttagga 441  Q
    |||||||||||||| |||||    
T  5943709 atttgtcagttgagctagga 5943690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 39284413 - 39284330
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    ||||||| | ||||| |||  |||||||||||||| ||||||||||||||| ||||||||||| || ||||| |||||||||||    
T  39284413 agatgaaatagtaatccacaaaaattaaactcacatacaactgtgaggtcttaggttcgaacccgaatcacgacgtccgacctt 39284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 41039303 - 41039370
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||    
T  41039303 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 41039370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 3716490 - 3716424
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||||||||||| ||  ||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  3716490 gtctaagatgaagtgacaatccactaaaaataaactcacacacaactgtgaggtctcaggttcgaac 3716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 13109898 - 13109804
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||||||||||||   |||||||||   | || ||| |||||||||||| ||||    
T  13109898 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgaggttctaggttcgaattcgggttacgacgtccgaccttgcaatt 13109804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 26264541 - 26264601
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    ||||||| || |||| || |||||||||||||||||||||||||||||| |||||||||||    
T  26264541 agatgaagtgataatacattgaaattaaactcacacacaactgtgaggtttcaggttcgaa 26264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 444
Target Start/End: Complemental strand, 49783837 - 49783713
Alignment:
Q  321 ccgtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcg 419  Q
    |||||| ||||||| ||||||  ||||||||||||| ||||| |||||||||||||  | |||||||||| || ||| | ||| |||||||| || ||||    
T  49783837 ccgtcttagatgaagtggtaaaccactgaaattaaattcacatacaactgtgaggttccgggttcgaacccgaatcatgacgttcgaccttgcaatttcg 49783738  T
Q  420 gtatttgtcagttgagttaggactt 444  Q
      ||||| || ||||||||||||||    
T  49783737 acatttgccaattgagttaggactt 49783713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 13183181 - 13183229
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  13183181 agatgaagtggtaattcactgaaattaaactcacatacaactgtaaggt 13183229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 192543 - 192489
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||| ||||||| ||||||| | |||||| |||||||||||||||||||||||||    
T  192543 gtcttagatgaagtggtaatccgctgaaaataaactcacacacaactgtgaggtc 192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 35945920 - 35945858
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||||||||  | ||||||||||    
T  35945920 agatgaagtggtaatccactgaaaataaattcacacacaactgtgaggttccgggttcgaacc 35945858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 50106201 - 50106263
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||||| ||| ||| |||||||| |||||||||||| |||||||||||| | ||||||||||    
T  50106201 agatgaaatggcaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacc 50106263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 412
Target Start/End: Complemental strand, 13097432 - 13097343
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttg 412  Q
    |||| ||||||| ||||||| || | |||||||||||||| |||||||||||||   ||||| ||| | | |||||| ||||||||||||    
T  13097432 gtcttagatgaagtggtaatccaataaaattaaactcacatacaactgtgaggttctaggtttgaatccgggtcacgacgtccgaccttg 13097343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 16770173 - 16770210
Alignment:
Q  340 aattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||||||||||| |||||||||||||||||||||||||    
T  16770173 aattcactgaaaataaactcacacacaactgtgaggtc 16770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 3716726 - 3716686
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  3716726 tggtaatttactaaaattaaactcacacacaactgtgaggt 3716686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 7275804 - 7275721
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    ||||||| ||||||  ||||||||||||||||| |||||||||||| ||  | |||||||| | ||||||   |||||||||||    
T  7275804 agatgaagtggtaaaccactgaaattaaactcatacacaactgtgaagttccgggttcgaatccgagtcataacgtccgacctt 7275721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 9886892 - 9886947
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtct 378  Q
    |||| ||||||| |||||||||| ||| |||||||||||||| |||||| ||||||    
T  9886892 gtcttagatgaagtggtaattcagtgatattaaactcacacataactgttaggtct 9886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 35110099 - 35110166
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| | || ||||||||||||||||||||||| |||||   ||||||||||    
T  35110099 gtcttagatgaagtggtaatcctctcaaattaaactcacacacaactgtaaggtcctgggttcgaacc 35110166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 21939065 - 21939016
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    ||||||| ||||||  | |||||||||||||| |||||||||||||||||    
T  21939065 agatgaagtggtaaaccgctgaaattaaactcgcacacaactgtgaggtc 21939016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 329 - 369
Target Start/End: Complemental strand, 11688385 - 11688345
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaact 369  Q
    |||||| ||||||| |||||||| |||||||||||||||||    
T  11688385 gatgaagtggtaatccactgaaaataaactcacacacaact 11688345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 32982371 - 32982411
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggtt 384  Q
    ||||||||| ||||||||||||||||||||  |||||||||    
T  32982371 cactgaaatcaaactcacacacaactgtgatttctcaggtt 32982411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 38817225 - 38817265
Alignment:
Q  349 aaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||||||| |||||||||| ||||||||||| |||||||||    
T  38817225 aaattaaattcacacacaattgtgaggtctcgggttcgaac 38817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 46447404 - 46447444
Alignment:
Q  350 aattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  46447404 aattaaactcacacataactgtgaggtcccgggttcgaacc 46447444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 8e-32; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 32606330 - 32606452
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||||||||||||||||||||||||| ||||| | |||||| ||||||| |||||||||||| |||||| |||||| ||||| || ||||||    
T  32606330 gtcttagatgaattggtaattcactgaaattaaattcacataaaactgtaaggtctcgggttcgaacctgggtcacgacgtccggccttgcaatttcggt 32606429  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||||||| ||||    
T  32606430 atttgtcagttgagttagaactt 32606452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 23358313 - 23358191
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | || ||| |||||| ||||| || ||||||    
T  23358313 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggt 23358214  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  23358213 atttgccagttgagctaggactt 23358191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 25112247 - 25112369
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||| ||||||||||||||||||| | ||||||||||   |||| | |||||||||||| || ||||||    
T  25112247 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccgaccttgcaatttcggt 25112346  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  25112347 atttgccagttgagctaggactt 25112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 330 - 444
Target Start/End: Original strand, 27229484 - 27229600
Alignment:
Q  330 atgaattggtaattcactgaaattaaa-ctcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgt 427  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||   |||||| |||||| ||||| || ||||  ||||||    
T  27229484 atgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtcccgggttcgaacccaggtcacgacgtccggccttgcaatttcgacatttgt 27229583  T
Q  428 cagttgagttaggactt 444  Q
    |||||||||||||||||    
T  27229584 cagttgagttaggactt 27229600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 4106866 - 4106744
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  4106866 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4106767  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||| | ||||||||    
T  4106766 atttgccagttgggctaggactt 4106744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 25872891 - 25872769
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaat-tcggt 421  Q
    |||| ||||||| |||||| |||| |||| |||||||| |||||| ||| |||||  |||||||||||||  ||||| |||||||||||||||| ||||     
T  25872891 gtcttagatgaagtggtaaatcacagaaaataaactcatacacaattgtaaggtcataggttcgaacctggatcacgacgtccgaccttgtaatatcggc 25872792  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| || ||||||||||||||    
T  25872791 atttgccaattgagttaggactt 25872769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 31770532 - 31770654
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | | |||| ||||| || |||||     
T  31770532 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacatccggccttgcaatttcggc 31770631  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  31770632 atttgccagttgagctaggactt 31770654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 40058366 - 40058244
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||| |||||||||||||||| | |||||||||| | |||||  |||||| ||||| || || ||     
T  40058366 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 40058267  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||||||||||||    
T  40058266 atttgccagttgagttaggactt 40058244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 47557909 - 47557787
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  ||||||||||||||||||| |||||||||||||  | |||||||||| | |||| | ||| ||||||||||| |||||     
T  47557909 gtcttagatgaagtggtaaaccactgaaattaaactcacatacaactgtgaggttccgggttcgaacccgggtcatgacgtgcgaccttgtaatttcggc 47557810  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||  |||||||||||||||||    
T  47557809 atttaccagttgagttaggactt 47557787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 44084063 - 44083946
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || || || |||||    
T  44084063 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggcatttg 44083964  T
Q  427 tcagttgagttaggactt 444  Q
     |||||||| ||||||||    
T  44083963 ccagttgagctaggactt 44083946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 4107437 - 4107322
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||  | |||||| ||||| || |||||     
T  4107437 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcgtgacgtccggccttgcaatttcggc 4107338  T
Q  422 atttgtcagttgagtt 437  Q
    ||||| ||||||||||    
T  4107337 atttgccagttgagtt 4107322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 27915580 - 27915703
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac-ctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| |||||||||| |||||||||||||| ||||||||||||| ||| |||||||||| |   |||||| |||||||||||| || ||| |    
T  27915580 gtcttagatgaagtggtaattcattgaaattaaactcatacacaactgtgagatcttaggttcgaactcaaggtcacgacgtccgaccttgcaatttcag 27915679  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     ||||  |||||||||||||||||    
T  27915680 catttaccagttgagttaggactt 27915703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 2146764 - 2146642
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||| ||||||||||||||||||||  |||||||||| | |||||  |||||| ||||| || |||||     
T  2146764 gtcttagatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcttgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 2146665  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||  |||||||| ||||||||    
T  2146664 attttccagttgagctaggactt 2146642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 25546275 - 25546397
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| | | |||||||| | |||| | |||||| ||||| || |||||     
T  25546275 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccggccttgcaatttcggc 25546374  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||  |||||||| ||||||||    
T  25546375 atttaccagttgagctaggactt 25546397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 43170939 - 43171061
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||  ||||||| || |||||||||||||||| ||||||| || ||||| | || ||||||| || ||| |||||| ||||| || |||||     
T  43170939 gtcttagatgacgtggtaatccattgaaattaaactcacatacaactgggaagtctccgatttgaacctgggttacgacgtccggccttgcaatttcggc 43171038  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||||||||||||    
T  43171039 atttgtcagttgagttaggactt 43171061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 47250251 - 47250373
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||  ||| || |||||||||||| | |||| | |||||| ||||| || |||||     
T  47250251 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactaagagatcccaggttcgaacccgggtcatgacgtccggccttgcaatttcggc 47250350  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  47250351 atttgccagttgagctaggactt 47250373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 47570718 - 47570812
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||| | |||| | |||||| ||||| ||||    
T  47570718 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatt 47570812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 5462950 - 5463015
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||||||||||| ||||  | || |||||||||||||||||||||||||||| |||||||||||||    
T  5462950 gtctaagatgaagtggttctccattgaaattaaactcacacacaactgtgagatctcaggttcgaa 5463015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 11355951 - 11355886
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| || | ||||||||    
T  11355951 gtcttagatgaagtggtaatccactgaaattaaactcacacacaactgtgagatcccgggttcgaa 11355886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 38781208 - 38781273
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||    
T  38781208 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaa 38781273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 344 - 447
Target Start/End: Complemental strand, 46427467 - 46427363
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggac 442  Q
    |||||||||||||||||||||||||||||||||  | | |||||| | |||||| | ||||| |||||| || || | ||||||||||||||| ||| ||    
T  46427467 cactgaaattaaactcacacacaactgtgaggttccggattcgaatccgagtcatgacgtccaaccttgcaattttgatatttgtcagttgagctagaac 46427368  T
Q  443 tttta 447  Q
    |||||    
T  46427367 tttta 46427363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 330 - 417
Target Start/End: Original strand, 5772826 - 5772913
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||| ||  ||||||||| | |||||   ||||||||||| ||||    
T  5772826 atgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtttcgagttcgaacccgggtcacattgtccgaccttgcaatt 5772913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 8439206 - 8439112
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| |||| ||||||||||||||||||||   |||||||| | | |||||  |||||||||||| ||||    
T  8439206 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcctgggttcgaatccgggtcacaacgtccgaccttgcaatt 8439112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 39513983 - 39514077
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| ||| ||||||||||||||||| |||||| ||||| | |||||||||  | |||||| |||||| ||||| ||||    
T  39513983 gtctcagatgaagtggtaatccaccgaaattaaactcacacataactgtaaggtcccgggttcgaactcgggtcacgacgtccggccttgcaatt 39514077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 328 - 444
Target Start/End: Original strand, 43753758 - 43753876
Alignment:
Q  328 agatgaattggtaattcactgaaattaaa-ctcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtattt 425  Q
    ||||||| ||||||| ||||||||||||| |||||| |||||||||||||  | ||||||||||   |||||| |||||| ||||| || ||||| ||||    
T  43753758 agatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccggccttgcaatttcggcattt 43753857  T
Q  426 gtcagttgagttaggactt 444  Q
    | |||||||  ||||||||    
T  43753858 gccagttgaactaggactt 43753876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 48146881 - 48146787
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| || ||||| | ||||||||||||||||||||||| | |||||||||| | |||||| | || ||||||| ||||    
T  48146881 gtcttagatgaagtggtaatccaatgaaaattaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacatctgaccttgcaatt 48146787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 373
Target Start/End: Original strand, 48444152 - 48444202
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  48444152 gtcttagatgaagtggtaattcactgaaattaaacttacacacaactgtga 48444202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 34763557 - 34763516
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  34763557 tggtaatccactgaaattaaactcacacacaactgtgaggtc 34763516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 338 - 444
Target Start/End: Complemental strand, 13887282 - 13887177
Alignment:
Q  338 gtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagt 436  Q
    ||||| ||||||||||||||||| |||  ||||||||||  | |||||||||||| |||||| ||||||  |||| || ||||| ||||| |||||||||    
T  13887282 gtaatccactgaaattaaactcataca--actgtgaggttccgggttcgaacctgggtcacgacgtccggtcttgcaagttcggcatttgccagttgagt 13887185  T
Q  437 taggactt 444  Q
    || |||||    
T  13887184 taagactt 13887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 17753104 - 17753060
Alignment:
Q  324 tctaagatgaattggtaattcactgaaattaaactcacacacaac 368  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  17753104 tctaagatgaattggtaattcattgaaatttaactcacacacaac 17753060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 447
Target Start/End: Original strand, 7162790 - 7162913
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||  ||||||| ||||||||| |  ||||||||| | |||||  |||||| ||||  || |||||     
T  7162790 gtcttagatgaagtggtaatccactgaaaataaact--cacacaattgtgaggtcccgagttcgaacccgggtcacaacgtccggccttacaatttcggc 7162887  T
Q  422 atttgtcagttgagttaggactttta 447  Q
    ||||| |||||||| |||||||||||    
T  7162888 atttgccagttgagctaggactttta 7162913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 373
Target Start/End: Original strand, 19630668 - 19630718
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||    
T  19630668 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtga 19630718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 28603139 - 28603073
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||| ||||||| ||||||| |||||| |||||||||||| |||| ||||| ||||| |||||||||    
T  28603139 gtcttagatgaagtggtaatccactgagattaaactcacatacaattgtgaagtctcgggttcgaac 28603073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 40657657 - 40657591
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||| ||||||| || |||| |||||||||||||||| |||| |||| ||||||||||| |||||||    
T  40657657 gtcttagatgaagtgataatccactgaaattaaactcgcacataactatgaggtctcagattcgaac 40657591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 31288222 - 31288275
Alignment:
Q  321 ccgtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    |||||| ||||||| ||||||  ||||||||||||||| |||||||||||||||    
T  31288222 ccgtcttagatgaagtggtaaaccactgaaattaaacttacacacaactgtgag 31288275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 38033852 - 38033803
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    ||||||| ||||| | |||||||| |||||||||||||||||||||||||    
T  38033852 agatgaagtggtactccactgaaaataaactcacacacaactgtgaggtc 38033803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 42081618 - 42081683
Alignment:
Q  322 cgtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||| |||| || |||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||    
T  42081618 cgtcttagataaagtggtaattcactgaaaataaact--cacacaactgtgaggtc-caggttcgaacc 42081683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 43203413 - 43203352
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtcc 405  Q
    ||||| || ||||||||||||||||||| ||||| | |||||||||| | ||||||||||||    
T  43203413 cactgtaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacggcgtcc 43203352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 7298151 - 7298219
Alignment:
Q  349 aaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    ||||||||||| || | || |||||||||||||||||||| ||| |||||| | ||||||||| |||||    
T  7298151 aaattaaactctcatataattgtgaggtctcaggttcgaatctgggtcacgacatccgaccttataatt 7298219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 10220473 - 10220539
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| |||||||| |||||  ||||||||||||||||||||| ||||||||||| || | ||||||||    
T  10220473 gtcttagatgaat-ggtaaaccactgaaattaaactcacacaaaactgtgaggtttcggattcgaacc 10220539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 41183943 - 41183876
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| || |||| |||||||| |||||||||||| ||||||||||| |  ||||||||||    
T  41183943 gtcttagatgaagtgataatccactgaaaataaactcacacataactgtgaggtattgggttcgaacc 41183876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 18506280 - 18506341
Alignment:
Q  327 aagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    ||||||||  |||||  |||||||||||||||||||||| ||||||| ||||| |||||||||    
T  18506280 aagatgaagcggtaaaccactgaaattaaactcacacac-actgtgaagtctcgggttcgaac 18506341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 29484762 - 29484876
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtc 428  Q
    ||||| || |||| ||||||||||||||||||| |||| ||||||||| | ||||| ||||    ||| | |||||| ||||| || ||||| ||||| |    
T  29484762 atgaagtgataatccactgaaattaaactcacatacaattgtgaggtcccgggttcaaacccagatcatgacgtccggccttgcaatttcggcatttgcc 29484861  T
Q  429 agttgagttaggact 443  Q
    ||||||| |||||||    
T  29484862 agttgagctaggact 29484876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 35577876 - 35577942
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||| ||||||| | ||||| || |||||||||||| |||||||| ||||| ||||| |||||||||    
T  35577876 gtcttagatgaaattgtaatccattgaaattaaacttacacacaattgtgaagtctcgggttcgaac 35577942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 417
Target Start/End: Original strand, 47960979 - 47961049
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||||||||||||||||||||||  |||||| | |||||||||| |  ||| | |||| ||||||||||||    
T  47960979 tgaaattaaactcacacacaactacgaggtcccgggttcgaacccggttcatgacgtctgaccttgtaatt 47961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 5587408 - 5587295
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||| |||||||||||||||  || |||||||||   |||||||||| |  |||||  |||||  |||| || |||||     
T  5587408 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggc 5587309  T
Q  422 atttgtcagttgag 435  Q
    ||||||||||||||    
T  5587308 atttgtcagttgag 5587295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 5592369 - 5592256
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||| |||||||||||||||  || |||||||||   |||||||||| |  |||||  |||||  |||| || |||||     
T  5592369 gtcttagatgaagtggtaatccactaaaattaaactcacacgtaaatgtgaggtcctgggttcgaacccggatcacgatgtccggacttgcaatttcggc 5592270  T
Q  422 atttgtcagttgag 435  Q
    ||||||||||||||    
T  5592269 atttgtcagttgag 5592256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Original strand, 15634884 - 15634929
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    ||||||| |||||||  ||||||| |||||||||||||||||||||    
T  15634884 agatgaagtggtaatctactgaaaataaactcacacacaactgtga 15634929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 25049965 - 25050009
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    ||||| ||||||| |||| |||||||||||||| |||||||||||    
T  25049965 atgaaatggtaatccacttaaattaaactcacatacaactgtgag 25050009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 56609 - 56487
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||||||||| || |||||     
T  56609 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccgaccttgcaatttcggc 56510  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  56509 atttgccagttgagctaggactt 56487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 1e-24; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 2959277 - 2959155
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||   |||| ||||| || |||||     
T  2959277 gtctaagatgaagtggtattccacggaaattaaactcacacacaactgtgaggtctcgggttcgaacctaagtcacgatatccggccttgcaatttcggc 2959178  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||  ||||||||||||||||    
T  2959177 atttgctagttgagttaggactt 2959155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 33621622 - 33621500
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  33621622 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33621523  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  33621522 atttgccagttgagctaggactt 33621500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 323 - 434
Target Start/End: Complemental strand, 4464255 - 4464143
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| |||||||||||| |  ||| | |||||| ||||| || |||||     
T  4464255 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaactgtgaggtcccaggttcgaacccggatcatgacgtccggccttgcaatttcggc 4464156  T
Q  422 atttgtcagttga 434  Q
    |||||||||||||    
T  4464155 atttgtcagttga 4464143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 444
Target Start/End: Complemental strand, 33704337 - 33704222
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtc 428  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || ||||| ||||| |    
T  33704337 atgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggcatttgcc 33704238  T
Q  429 agttgagttaggactt 444  Q
    ||||||| ||||||||    
T  33704237 agttgagctaggactt 33704222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 21037418 - 21037325
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| | | |||||||| |||||||  |||||| ||||| ||||    
T  21037418 gtcttagatgaagtggtaattcactgaaaataaactcacacacaactgtgaggtc-cggattcgaacccgagtcacaacgtccggccttgcaatt 21037325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 29009650 - 29009715
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||| ||||||| |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  29009650 gtcttagatgaagtggtaattcactaaaaataaactcacacacaactgtgaggtcccaggttcgaa 29009715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 7613425 - 7613355
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaact-gtgaggtctcaggttcgaacctgagtcacg 399  Q
    ||||| |||||| |||||||||||||||||| ||| | || ||||||||||||||||||||||||||||||    
T  7613425 atgaagtggtaaatcactgaaattaaactcatacatatcttgtgaggtctcaggttcgaacctgagtcacg 7613355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 349 - 444
Target Start/End: Complemental strand, 12252125 - 12252029
Alignment:
Q  349 aaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaat-tcggtatttgtcagttgagttaggactt 444  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||   |||||| | ||||  |||| ||| ||||||||||||||||||| ||||||||    
T  12252125 aaattaaactcacacacaactatgaggtctcgggttcaaaccctggtcacgacatccggtcttgcaatctcggtatttgtcagttgagctaggactt 12252029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 21000820 - 21000698
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||| ||||||||| ||||||||| | ||||||||||   |||| | ||| || ||||| || |||||     
T  21000820 gtctcagatgaagtggtaaaccactgaaattaaacccacacacaattgtgaggtcccgggttcgaacccaggtcatgacgtacggccttgcaatttcggc 21000721  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  21000720 atttgccagttgagctaggactt 21000698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 28323060 - 28322938
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||| ||||||||||||||| ||||||||| | |||||||||| |  ||| | |||||| ||||  || |||||     
T  28323060 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 28322961  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  28322960 atttgccagttgagctaggactt 28322938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 35218640 - 35218694
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  35218640 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 35218694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 28592128 - 28592183
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtct 378  Q
    |||| |||| |||||||||| || ||||| ||||||||||||||||||||||||||    
T  28592128 gtcttagataaattggtaatccattgaaaataaactcacacacaactgtgaggtct 28592183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 32289467 - 32289408
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||||| |||||||||||||| | |||||| ||||||||||||||||||||  |||||||    
T  32289467 gatgaagtggtaattcactgataataaacttacacacaactgtgaggtctcgagttcgaa 32289408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 19145598 - 19145544
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||| ||||||| ||||||| ||||||||||||| |||||||||| |||||||||    
T  19145598 gtcttagatgaagtggtaatccactgaaattaaattcacacacaattgtgaggtc 19145544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 24619079 - 24619201
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| |||||||  ||||||||||||||||||||||| | ||||||| | || ||||||  | |||||| ||| || ||||  || || |      
T  24619079 gtcttagatgaagtggtaatcgactgaaattaaactcacacacaattatgaggtcacgggatcgaactcgggtcacgacgttcggccttacaattttgac 24619178  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||||||||||||    
T  24619179 atttgtcagttgagttaggactt 24619201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 347 - 447
Target Start/End: Original strand, 32353965 - 32354065
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacc-ttgtaattcggtatttgtcagttgagttaggacttt 445  Q
    ||||| ||||||||||||||||||||| ||| || ||||||| | |||||||  ||||||||| ||| | || || |||||||| ||||||||||| |||    
T  32353965 tgaaaataaactcacacacaactgtgaagtccca-gttcgaatccgagtcacaacgtccgacctttgaattttggcatttgtcaattgagttaggatttt 32354063  T
Q  446 ta 447  Q
    ||    
T  32354064 ta 32354065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 361139 - 361063
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacg 399  Q
    |||| ||||||| || |||| ||||||||||||||||||| | |||||||||||  | |||||||||| | ||||||    
T  361139 gtcttagatgaagtgttaatccactgaaattaaactcacatataactgtgaggttccgggttcgaacccgtgtcacg 361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 353 - 444
Target Start/End: Complemental strand, 11572106 - 11572014
Alignment:
Q  353 taaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggactt 444  Q
    ||||||||||||||||||||||||| | |||||||||| | |||||| |||| | ||||  || ||| | |||||| ||||||| ||||||||    
T  11572106 taaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtctggccttacaatttctgcatttgttagttgagctaggactt 11572014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 374
Target Start/End: Original strand, 10999416 - 10999459
Alignment:
Q  331 tgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||    
T  10999416 tgaagtggtaatccactgaaattaaactcacatacaactgtgag 10999459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 7014315 - 7014375
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    ||||||| ||||||| ||||||||||||||||||| | || | |||||| || ||||||||    
T  7014315 agatgaagtggtaatacactgaaattaaactcacataaaattatgaggtttcgggttcgaa 7014375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 22576309 - 22576233
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacg 399  Q
    |||| ||| ||| ||||||| || |||||| ||||||||||| |||||||||||  | |||||||| ||| ||||||    
T  22576309 gtcttagaagaagtggtaatacaatgaaatcaaactcacacataactgtgaggttccgggttcgaatctgggtcacg 22576233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 5e-24; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 45264640 - 45264761
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaattcggta 422  Q
    |||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||||| | |||||||||| |||||||| ||| ||||||   | ||||| |    
T  45264640 gtcttagaggaagtggtaatccactgaaattaaactcacacaaaactgtgaggtcccgggttcgaacccgagtcacgacgttcgacctgcaatttcggca 45264739  T
Q  423 tttgtcagttgagttaggactt 444  Q
    |||| |||||||||||||||||    
T  45264740 tttgccagttgagttaggactt 45264761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 70523 - 70645
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||| |||| | |||| | |||||||||||| || |||||     
T  70523 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcaaacccgggtcatgacgtccgaccttgcaatttcggc 70622  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  70623 atttgccagttgagctaggactt 70645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 6602518 - 6602640
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  6602518 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6602617  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  6602618 atttgccagttgagctaggactt 6602640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 6677971 - 6678093
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  6677971 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 6678070  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  6678071 atttgccagttgagctaggactt 6678093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 32333242 - 32333120
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || |||||     
T  32333242 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 32333143  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  32333142 atttgccagttgagctaggactt 32333120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 330 - 405
Target Start/End: Complemental strand, 5385459 - 5385384
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtcc 405  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| |||||    
T  5385459 atgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcccgggttcgaacctgggtcacgacgtcc 5385384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 1078648 - 1078742
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||||| |||| | |||||| ||||| ||||    
T  1078648 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacctgggtcatgacgtccggccttgcaatt 1078742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 28817384 - 28817262
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||| | |||||  |||||| ||||| || |||||     
T  28817384 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 28817285  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  28817284 atttgccagttgagctaggactt 28817262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 35779497 - 35779619
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || || ||     
T  35779497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 35779596  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  35779597 atttgccagttgagctaggactt 35779619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 39303438 - 39303315
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaa-ctcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||   |||| | |||||| ||||| || |||||    
T  39303438 gtcttagatgaagtggtaatccactgaaattaaaactcacacacaactgtgaggtctcgggttcaaacccatgtcatgacgtccggccttgcaatttcgg 39303339  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     ||||| |||||||| ||||||||    
T  39303338 catttgccagttgagctaggactt 39303315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 1340 - 1434
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| ||||    
T  1340 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaaccagggtcacaacgtccggccttgcaatt 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 7792789 - 7792667
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| | ||||| |||||||| |||||||||||||||||||||| || | |||||||||| |||||||  |||||  ||||| || |||||     
T  7792789 gtcttagatgaagtagtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgagtcacaacgtccagccttgcaatttcggc 7792690  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  7792689 atttgccagttgagctaggactt 7792667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 328 - 398
Target Start/End: Complemental strand, 7813445 - 7813375
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcac 398  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |||||||    
T  7813445 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgagtcac 7813375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 42192639 - 42192761
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||  | |||| | |||||| ||||| || |||||     
T  42192639 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggtcatgacgtccggccttgcaatttcggc 42192738  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  42192739 atttgccagttgagctaggactt 42192761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 13891218 - 13891141
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacgg 400  Q
    |||| ||||||| ||||||  |||||||| |||||||||||||||||||||||||  ||||||||||| |||||||||    
T  13891218 gtcttagatgaagtggtaaaccactgaaaataaactcacacacaactgtgaggtcctaggttcgaacccgagtcacgg 13891141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 10963242 - 10963362
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||  ||||||||||||||||| | ||||||||||||  ||||  ||| || |||||||| |||||     
T  10963242 gtcttagatgaagtggtaatccactgaaaataaact--cacacaactgtgaggtcccgggttcgaacctggatcacaacgttcggccttgtaatttcggc 10963339  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  10963340 atttgccagttgagctaggactt 10963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 4530982 - 4531104
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  ||||||||||||||||||||||| |||||||||| | |||||||||| | |||| | |||||  ||||| || |||||     
T  4530982 gtcttagatgaagtggtaaaccactgaaattaaactcacacacagctgtgaggtcccgggttcgaacccgggtcatgacgtccagccttgcaatttcggc 4531081  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| || ||||| ||||||||    
T  4531082 atttgccaattgagctaggactt 4531104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 42885302 - 42885208
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||| | |||| | |||||| ||||| ||||    
T  42885302 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaacccgggtcatgacgtccggccttgcaatt 42885208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 31532130 - 31532179
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31532130 agatgaagtggtaatccactgaaattaaactcacacacaactgtgaggtc 31532179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 40911343 - 40911227
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||  |||||||||||||||||||||||  ||||||||| | |||||||||| | |||||| |||||| ||||| || ||||| |||||    
T  40911343 agatgaagtggtaagccactgaaattaaactcacacacagttgtgaggtc-ccggttcgaacccgggtcacgacgtccggccttgcaatttcggcatttg 40911245  T
Q  427 tcagttgagttaggactt 444  Q
     |||||||| ||| ||||    
T  40911244 ccagttgagctagcactt 40911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 411
Target Start/End: Complemental strand, 3822524 - 3822436
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    |||| ||| ||| |||||||||||| |||||||||||||||||||||||||| ||   |||||||||| | |||||  |||||||||||    
T  3822524 gtcttagaagaagtggtaattcactaaaattaaactcacacacaactgtgagatcctgggttcgaacccgggtcacaacgtccgacctt 3822436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 353 - 444
Target Start/End: Complemental strand, 18386806 - 18386714
Alignment:
Q  353 taaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggactt 444  Q
    ||||||||||||||||||||||||| | |||||||||| |||||| | | |||||||||| || ||| | |||||||||||||| ||| ||||    
T  18386806 taaactcacacacaactgtgaggtcccgggttcgaacccgagtcatgacatccgaccttgcaatttcagcatttgtcagttgagctagaactt 18386714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 7403700 - 7403782
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    ||||||| ||||||| |||||||||||| |||||| |||||||||| ||||| | |||||||  |||||||| |||||||||||    
T  7403700 agatgaagtggtaat-cactgaaattaagctcacaaacaactgtgatgtctcggattcgaactcgagtcacgacgtccgacctt 7403782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 39435410 - 39435343
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| | ||||| |||  ||||||||||||||||||||||||||||||| ||||||||||    
T  39435410 gtcttagatgaagtcgtaatccacataaattaaactcacacacaactgtgaggtctcgggttcgaacc 39435343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 44124139 - 44124089
Alignment:
Q  338 gtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  44124139 gtaattcaatgaaattaaacttacacacaactgtgaagtctcaggttcgaa 44124089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 18752448 - 18752347
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggac 442  Q
    |||||||||||||| ||||||||||||| ||||  | ||||||||||    ||||| |||||||||||  || |||||||||||||||||||  ||||||    
T  18752448 cactgaaattaaacccacacacaactgtaaggttccgggttcgaaccccgatcacgacgtccgaccttacaatttcggtatttgtcagttgaactaggac 18752349  T
Q  443 tt 444  Q
    ||    
T  18752348 tt 18752347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 388
Target Start/End: Original strand, 31695269 - 31695334
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||| ||||||| ||||||  || ||||||||||||||||||||| ||||||||| ||||||||||    
T  31695269 gtcttagatgaagtggtaaaccattgaaattaaactcacacacaattgtgaggtcccaggttcgaa 31695334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 444
Target Start/End: Original strand, 41849237 - 41849353
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |||||||  | | ||||||||    ||||| |||||||||||| || ||||| |||||    
T  41849237 agatgaaatggtaat-cactgaaattaaactcacacacaacagtgaggttccggattcgaacccagatcacgacgtccgaccttgcaatttcggcatttg 41849335  T
Q  427 tcagttgagttaggactt 444  Q
     ||||||| ||| |||||    
T  41849336 ccagttgaattaagactt 41849353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 9292141 - 9292096
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||||    
T  9292141 agatgaagtggtaatccactgaaaataaactcacacacaactgtga 9292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 367
Target Start/End: Complemental strand, 29425479 - 29425435
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaa 367  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29425479 gtcttagatgaagtggtaatccactgaaattaaactcacacacaa 29425435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 31969720 - 31969787
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||  ||||||||||||| |||||||||||| ||||||| |  |||||||||    
T  31969720 gtcttagatgaagtggtaaaccactgaaattaaattcacacacaactttgaggtcccgtgttcgaacc 31969787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 20269653 - 20269607
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||||    
T  20269653 agatgaaatggtaatccattgaaaataaactcacacacaactgtgag 20269607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 21056282 - 21056236
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||||    
T  21056282 agatgaaatggtaatccattgaaaataaactcacacacaactgtgag 21056236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 435
Target Start/End: Complemental strand, 22203780 - 22203715
Alignment:
Q  371 tgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt-cggtatttgtcagttgag 435  Q
    ||||||||| | |||||||| | |||||| |||| ||||||| |||| ||||||||||||||||||    
T  22203780 tgaggtctcggattcgaacccgggtcacgacgtctgaccttgcaatttcggtatttgtcagttgag 22203715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 373
Target Start/End: Original strand, 42364724 - 42364752
Alignment:
Q  345 actgaaattaaactcacacacaactgtga 373  Q
    |||||||||||||||||||||||||||||    
T  42364724 actgaaattaaactcacacacaactgtga 42364752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1348 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold1348
Description:

Target: scaffold1348; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 862 - 984
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  862 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 961  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  962 atttgccagttgagctaggactt 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 13951 - 14073
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |  ||||  |||||| ||||| || ||||||    
T  13951 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 14050  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  14051 atttgccagttgagctaggactt 14073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 19631 - 19753
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |  ||||  |||||| ||||| || ||||||    
T  19631 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacaacgtccggccttgcaatttcggt 19730  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  19731 atttgccagttgagctaggactt 19753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 13204085 - 13203963
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||| |||||||||||| | |||||||||| | |||||| |||||| ||||| || |||||     
T  13204085 gtcttagatgaagtggtaatccactgaaaataaactcacacataactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 13203986  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  13203985 atttgccagttgagctaggactt 13203963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 28591350 - 28591472
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||||||||||| ||||||  |||||| |||||||||| ||||||||||||||| ||||||| ||||| |||||||  |||||| ||||| || ||| ||    
T  28591350 gtctaagatgaagtggtaaaccactgacattaaactcatacacaactgtgaggtttcaggtttgaacccgagtcactacgtccggccttgcaatttcagt 28591449  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| ||||| |||||||||||    
T  28591450 atttgccagtttagttaggactt 28591472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 2971112 - 2970990
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| | |||||  |||| ||||||  || ||||      
T  2971112 gtcttagatgaagtggtaatccaccgaaaataaactcacacacaactgtgaggtctcaggttcgaacccgggtcacaacgtctgaccttacaatttcgac 2971013  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||| ||||||||| ||||||||    
T  2971012 atttatcagttgagctaggactt 2970990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 4824939 - 4825061
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| || ||||| ||||||||||||||||||||||||| | |||| ||||||| |||||  |||||| ||||| || |||||     
T  4824939 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggtttgaacctgggtcacaacgtccggccttgcaatttcggc 4825038  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  4825039 atttgccagttgagctaggactt 4825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 21018351 - 21018229
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||| | || || ||     
T  21018351 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggcctcgcaattttggc 21018252  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  21018251 atttgccagttgagctaggactt 21018229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 35317697 - 35317819
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||| ||   ||||   |||||||||||| || |||||     
T  35317697 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaccccaggtcataacgtccgaccttgcaatttcggc 35317796  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  35317797 atttgccagttgagctaggactt 35317819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 31909385 - 31909452
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||    
T  31909385 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacc 31909452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 417
Target Start/End: Complemental strand, 29266003 - 29265909
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||| | | |||||  | | |||||||||||||    
T  29266003 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaatccgggtcacaacattcgaccttgtaatt 29265909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 444
Target Start/End: Original strand, 1191561 - 1191662
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggac 442  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||| |  ||||| |||||| ||||| || ||||  ||||| |||||||| ||||||    
T  1191561 cactgaaattaaactcacacacaattgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcgtcatttgccagttgagctaggac 1191660  T
Q  443 tt 444  Q
    ||    
T  1191661 tt 1191662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 27721546 - 27721437
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttga 434  Q
    ||||||| ||||||||||||| ||||| |||||||||||||| | ||||| |||| | |||||| |||||||| ||| || ||||| ||||  |||||||    
T  27721546 tggtaatccactgaaattaaattcacatacaactgtgaggtcccgggttcaaacccgggtcacgacgtccgactttgcaatttcggcattttccagttga 27721447  T
Q  435 gttaggactt 444  Q
    | ||||||||    
T  27721446 gctaggactt 27721437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 2786398 - 2786277
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| ||||||| ||||||||| |||||||||||||||| |||||| |||   |  |||||||||||||||||  || |||||     
T  2786398 gtcttagatgaagtggtaatccactgaa-ttaaactcatacacaactgtgaggtcccaggtttgaattcggatcacggcgtccgaccttacaatttcggc 2786300  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| || |||| |||||||||    
T  2786299 atttgccaattgaattaggactt 2786277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 21112177 - 21112055
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||  ||||||| |||||||| |||||||| |||||||| ||||||| |||||||||||||  |||||| |||  | ||||| || ||||      
T  21112177 gtcttagatgatgtggtaatccactgaaaataaactcaaacacaactttgaggtcccaggttcgaacctaggtcacgacgtatgtccttgcaatttcgac 21112078  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||||||| |||| ||||||||    
T  21112077 atttgtcagctgagctaggactt 21112055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 377
Target Start/End: Original strand, 32143414 - 32143468
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  32143414 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtc 32143468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 8734125 - 8734002
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaa-ctcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| ||||||| ||||||| ||||| |||||  |||||||||||||  | |||||||||||  |||||| |||||| ||||| || ||| |    
T  8734125 gtcttagatgaagtggtaatccactgaagttaaaactcacgtacaactgtgaggttccgggttcgaacctaggtcacgacgtccggccttgcaatttcag 8734026  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     ||||| |||||||| ||||||||    
T  8734025 catttgccagttgagctaggactt 8734002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 23262672 - 23262606
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||| ||||   ||||||||||    
T  23262672 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggttctaggttcgaac 23262606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 17984763 - 17984816
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtca 397  Q
    |||| ||||||||||||||||||||||||||||  | |||||||||| ||||||    
T  17984763 cactaaaattaaactcacacacaactgtgaggttccgggttcgaacccgagtca 17984816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 388
Target Start/End: Complemental strand, 35546061 - 35545996
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||| ||||||| || |||| |||| ||||||||| |||| |||||||||||||| ||||||||||    
T  35546061 gtcttagatgaagtgataatccacttaaattaaacccacatacaactgtgaggtcccaggttcgaa 35545996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 388
Target Start/End: Complemental strand, 6021107 - 6021055
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    ||||||| |||||||| |||||||||||||||||| |||||| | ||||||||    
T  6021107 tggtaatccactgaaaataaactcacacacaactgagaggtcccgggttcgaa 6021055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 12257484 - 12257417
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||| | |||||||   ||||||||||    
T  12257484 gtcttagatgaagtggtaatccactgaaaataaactcacacacaattatgaggtcctgggttcgaacc 12257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 373
Target Start/End: Complemental strand, 19181824 - 19181789
Alignment:
Q  338 gtaattcactgaaattaaactcacacacaactgtga 373  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19181824 gtaatccactgaaattaaactcacacacaactgtga 19181789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 373
Target Start/End: Complemental strand, 40177747 - 40177702
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  40177747 agatgaagtggtaatccactgaaaataaactcacacacaacggtga 40177702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 3386906 - 3386946
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    ||||||| ||||||||||||| |||||||||||| ||||||    
T  3386906 tggtaatccactgaaattaaattcacacacaactttgaggt 3386946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 28423242 - 28423302
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggt 383  Q
    |||| ||||||| |||||||  | |||||| |||||||||||||| ||||||||| |||||    
T  28423242 gtcttagatgaaatggtaatatagtgaaataaaactcacacacaattgtgaggtcccaggt 28423302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 41580080 - 41580144
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctg 392  Q
    ||||||| ||||||| || | |||||||||  ||||||||||||||||| || | ||||||||||    
T  41580080 agatgaagtggtaatccattaaaattaaacctacacacaactgtgaggtttcggattcgaacctg 41580144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 3e-22; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 34739408 - 34739286
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  34739408 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 34739309  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  34739308 atttgccagttgagctaggactt 34739286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 45874183 - 45874061
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || || ||     
T  45874183 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 45874084  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||| ||||||||    
T  45874083 atttgtcagttgagctaggactt 45874061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 53457952 - 53457830
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | | |||||||| | |||| | |||||||||||| || |||||     
T  53457952 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccggattcgaacccgggtcatgacgtccgaccttgcaatttcggc 53457853  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  53457852 atttgccagttgagctaggactt 53457830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 1174079 - 1173957
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||   |||| | |||||| ||||| || |||||     
T  1174079 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 1173980  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  1173979 atttgccagttgagctaggactt 1173957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 12867969 - 12867847
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||| |||||||||||| || |||||||||||  | |||||| |||||||||||| || |||||     
T  12867969 gtcttagatgaagtggtaatccactgaaaataaactcactcacaactgtgagatcccaggttcgaactcgggtcacgacgtccgaccttgcaatttcggc 12867870  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||| ||||    
T  12867869 atttgacagttgagctagaactt 12867847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 26424858 - 26424979
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  26424858 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccg-ccttgcaatttcggc 26424956  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  26424957 atttgccagttgagctaggactt 26424979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 28798388 - 28798510
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||| ||||| | |||||||||| | |||||| |||||| ||||| || |||||     
T  28798388 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcggc 28798487  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||  ||||||||    
T  28798488 atttgccagttgaactaggactt 28798510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 29581044 - 29581137
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||  |||||| |||||| ||||| ||||    
T  29581044 gtcttagatgaagtggtaatccact-aaattaaactcacacacaactgtgaggtctcgggttcgaacctaggtcacgacgtccggccttgcaatt 29581137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 43139906 - 43140028
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  43139906 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 43140005  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||| ||||    
T  43140006 atttgccagttgagctagaactt 43140028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 329 - 444
Target Start/End: Original strand, 238464 - 238580
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgt 427  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||   |||| |||||||  ||||| || ||||| |||||     
T  238464 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcatggcgtccagccttgcaatttcggcatttga 238563  T
Q  428 cagttgagttaggactt 444  Q
    |||||||| ||||||||    
T  238564 cagttgagctaggactt 238580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 19849503 - 19849625
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  || ||||| ||||||||||||||||||||||||| | |||||||||| |  ||||| |||||| ||||| || |||||     
T  19849503 gtcttagatgaagtggtaaaccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccggccttgcaatttcggc 19849602  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  19849603 atttgccagttgagctaggactt 19849625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 22608113 - 22607991
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| | ||||| || |||||||||||||| |||||||||||||||| | |||||||||| | |||||| |||||| ||||| || ||||      
T  22608113 gtctcagatgaagtagtaatccattgaaattaaactcagacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 22608014  T
Q  422 atttgtcagttgagttaggactt 444  Q
    || ||||||||||| ||||||||    
T  22608013 atctgtcagttgagctaggactt 22607991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 336 - 444
Target Start/End: Complemental strand, 55214767 - 55214658
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttga 434  Q
    ||||||| |||||||| |||||||| |||||||||||||||| | |||||||||| | |||||| |||||| ||||| || || || ||||| |||||||    
T  55214767 tggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttggcatttgacagttga 55214668  T
Q  435 gttaggactt 444  Q
    |||| |||||    
T  55214667 gttaagactt 55214658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 336 - 447
Target Start/End: Complemental strand, 41679489 - 41679377
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttga 434  Q
    |||||| |||||||||||| |||||||||||||||||| ||   || || ||||  |||||||| ||||||||||||||| ||| | |||||||||||||    
T  41679489 tggtaagtcactgaaattacactcacacacaactgtgaagttgtagatttgaactcgagtcacgacgtccgaccttgtaatttcagcatttgtcagttga 41679390  T
Q  435 gttaggactttta 447  Q
    | ||| |||||||    
T  41679389 gctagaactttta 41679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 18257457 - 18257335
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||| ||||||||||||||| | || ||||||| |  ||| | |||||| ||||| || |||||     
T  18257457 gtcttagatgaagtggtaatccactgaaaataaactcacgcacaactgtgaggtcccgggctcgaacccggatcatgacgtccggccttgcaatttcggc 18257358  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  18257357 atttgccagttgagctaggactt 18257335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 54768432 - 54768554
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| ||||||||  |||||| |||||||||||||||||   |||||||||| | |||| | |||||| ||||| || |||||     
T  54768432 gtcttagatgaagtggtaatccactgaaaaaaaactcgcacacaactgtgaggtcctgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54768531  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  54768532 atttgccagttgagctaggactt 54768554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 417
Target Start/End: Original strand, 23710338 - 23710427
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    ||||||| ||||||| ||||||||||||||||||||  |||||||||||  |||||||||| | | |||||| |||||| ||||| ||||    
T  23710338 agatgaagtggtaatccactgaaattaaactcacacgtaactgtgaggttccaggttcgaatccgggtcacgacgtccggccttgcaatt 23710427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 1966678 - 1966602
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacg 399  Q
    |||| ||||||| | ||||| |||||||||||||||||||||||||||||||||| |   ||||||||||| |||||    
T  1966678 gtcttagatgaagttgtaatccactgaaattaaactcacacacaactgtgaggtcccgaattcgaacctgaatcacg 1966602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 23417483 - 23417603
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||| | ||| | |||||||||| | |||||  |||||| ||||| || || ||     
T  23417483 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaagtcccgggttcgaacccgggtcacaacgtccggccttgcaattttggc 23417582  T
Q  422 atttgtcagttgagttaggac 442  Q
    ||||| |||||||| ||||||    
T  23417583 atttgccagttgagctaggac 23417603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 50033503 - 50033443
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| |||||| |||||||||    
T  50033503 atgaagtggtaattcattgaaattaaacttacacacaactgtgatgtctcatgttcgaacc 50033443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 12735559 - 12735492
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||   ||||||||||    
T  12735559 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcctgggttcgaacc 12735492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 441
Target Start/End: Complemental strand, 2075609 - 2075515
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaattcggtatttgtcagttgagttagga 441  Q
    |||||||||||||||||| |||||||||||| | ||||||||||  | ||| | |||||| ||||| |||| | |||||| |||||||| |||||    
T  2075609 tgaaattaaactcacacataactgtgaggtcccgggttcgaacccaaatcatgacgtccgcccttgcaatttgatatttggcagttgaggtagga 2075515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 417
Target Start/End: Original strand, 22910281 - 22910351
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||||||||||| | ||||||||||||| || |||||||||||| | |||||| |||||||||||| ||||    
T  22910281 tgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatt 22910351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 417
Target Start/End: Complemental strand, 22968241 - 22968171
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||||||||||| | ||||||||||||| || |||||||||||| | |||||| |||||||||||| ||||    
T  22968241 tgaaattaaacttagacacaactgtgagatcccaggttcgaacccgggtcacgacgtccgaccttgcaatt 22968171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 338 - 388
Target Start/End: Complemental strand, 50036005 - 50035955
Alignment:
Q  338 gtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    |||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  50036005 gtaattcaatgaaattaaacttacacacaactgtgaagtctcaggttcgaa 50035955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 51287730 - 51287676
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaatt-aaactcacacacaactgtgaggt 376  Q
    |||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  51287730 gtcttagatgaaatggtaattcactgaaattaaaactcacacacaactgtgaggt 51287676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 322 - 411
Target Start/End: Complemental strand, 16555436 - 16555347
Alignment:
Q  322 cgtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    ||||| ||||||| |||||||||| | |||||||| ||||||||||||||||||| |||| ||  ||  ||||| ||| |||||||||||    
T  16555436 cgtcttagatgaagtggtaattcattaaaattaaattcacacacaactgtgaggtttcagatttaaatatgagttacgacgtccgacctt 16555347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 373
Target Start/End: Complemental strand, 23532162 - 23532125
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtga 373  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23532162 tggtaattcactgaaattaaactcacacacaactgtga 23532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 31015110 - 31015057
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  31015110 gtcttagatgaagtggtaaagcactgaaattaaactcacacacaactgtgaggt 31015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 344 - 417
Target Start/End: Complemental strand, 37134155 - 37134082
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||||||||||||||||||||||||||||| || || |||||||||| |  ||| | | |||||||||||||||    
T  37134155 cactgaaattaaactcacacacaactgtgaagtttcgggttcgaacccggatcatgacatccgaccttgtaatt 37134082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 417
Target Start/End: Complemental strand, 37395739 - 37395658
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||||| |||||||||||| ||||||||||||||||||||| |||| || ||||  || ||| | |||||||||||| ||||    
T  37395739 tggtaagtcactgaaattatactcacacacaactgtgaggtttcagatttgaactcgaatcatgacgtccgaccttgcaatt 37395658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 39807959 - 39807918
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  39807959 tggtaatccactgaaattaaactcacacacaactgtgaggtc 39807918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 19814228 - 19814145
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgacctt 411  Q
    ||||||| |||||||  |||||||||||||||||||| || ||||||||| |||||| |||||   |||||| |||||| ||||    
T  19814228 agatgaagtggtaatcaactgaaattaaactcacacataattgtgaggtcccaggtttgaacccaggtcacgacgtccggcctt 19814145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 2864772 - 2864870
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggactt 444  Q
    ||||||||| ||||||||||||| ||||||   ||||||||||| | |||||| |||||  ||||| || || || ||||| |||||||||||||||||    
T  2864772 tgaaattaagctcacacacaactctgaggttctaggttcgaacccgggtcacgacgtcccgccttgcaatttaggcatttgccagttgagttaggactt 2864870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 323 - 412
Target Start/End: Original strand, 52768301 - 52768389
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttg 412  Q
    |||| |||||||| |||||| || |||||||||||||||||||||||||||| ||   ||||||||   || ||||| ||||||||||||    
T  52768301 gtcttagatgaat-ggtaatccattgaaattaaactcacacacaactgtgagatccttggttcgaattcgaatcacgacgtccgaccttg 52768389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 19673936 - 19673996
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||| ||||||| |||||||||||||||| |||| || ||||||||| | ||||||||||    
T  19673936 atgaagtggtaatccactgaaattaaactcgcacataattgtgaggtcccgggttcgaacc 19673996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 24417891 - 24417959
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtc 404  Q
    ||||||| |||| ||||||||||||  ||||||||||||||||| | |||||||| | |||||| ||||    
T  24417891 tggtaatccactaaaattaaactcatccacaactgtgaggtctcggattcgaacccgggtcacgacgtc 24417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 434
Target Start/End: Complemental strand, 32778238 - 32778141
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttga 434  Q
    ||||||| |||| ||| ||||||||||||  | |||||||||||  ||||||||| |  ||||| |||||||||||| || || ||||||||||||||||    
T  32778238 tggtaatccactaaaaataaactcacaca--attgtgaggtctcgtgttcgaacccggatcacgacgtccgaccttgcaattttggtatttgtcagttga 32778141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 52172003 - 52172043
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  52172003 tggtaatccactgaaattaaactcacacacaattgtgaggt 52172043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 390
Target Start/End: Complemental strand, 12767191 - 12767148
Alignment:
Q  347 tgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||||||||||||||||||||||||||||| || | ||||||||    
T  12767191 tgaaattaaactcacacacaactgtgaggtttcggattcgaacc 12767148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 33770696 - 33770629
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| |||||||  |||||  |||||||||||||||||||||||||| ||| ||| | ||||||||||    
T  33770696 gtcttagatgaagcggtaaaccactgaaattaaactcacacacaactatgaagtcccgggttcgaacc 33770629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 1126010 - 1125964
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    ||||||| |||||||| | |||||||||||||| |||||||||||||    
T  1126010 agatgaagtggtaatttattgaaattaaactcatacacaactgtgag 1125964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 378
Target Start/End: Original strand, 41001535 - 41001577
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtct 378  Q
    ||||||| ||||||||||||||||||||| || ||||||||||    
T  41001535 tggtaatgcactgaaattaaactcacacataattgtgaggtct 41001577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 11278106 - 11277988
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||    ||||||||||||||| | |||| ||||| | |||| |  ||||| ||||| || |||||     
T  11278106 gtcttagatgaagtggtaaaccactgaaattaaact----cacaactgtgaggtcccgggtttgaacccgggtcatgatgtccggccttgcaatttcggc 11278011  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  11278010 atttgccagttgagctaggactt 11277988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 37620739 - 37620678
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||||| ||||||| ||||||||||||||||||||| | ||||||  || | ||||||||||    
T  37620739 gatgaagtggtaatccactgaaattaaactcacacaaacctgtgatatcccgggttcgaacc 37620678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 373
Target Start/End: Original strand, 44369936 - 44369965
Alignment:
Q  344 cactgaaattaaactcacacacaactgtga 373  Q
    ||||||||||||||||||||||||||||||    
T  44369936 cactgaaattaaactcacacacaactgtga 44369965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 48822934 - 48822890
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgag 374  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||    
T  48822934 atgaagtggtaatctattgaaattaaactcacacacaactgtgag 48822890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 323 - 371
Target Start/End: Original strand, 50347329 - 50347377
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgt 371  Q
    |||| ||||||  ||||||| ||||||||||||||||||||||| ||||    
T  50347329 gtcttagatgaggtggtaatccactgaaattaaactcacacacatctgt 50347377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 3e-22; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 7824454 - 7824576
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  7824454 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 7824553  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  7824554 atttgccagttgagctaggactt 7824576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 29689482 - 29689604
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  29689482 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 29689581  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  29689582 atttgccagttgagctaggactt 29689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 444
Target Start/End: Original strand, 55018040 - 55018156
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgt 427  Q
    |||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||| |||||| ||||| || || |  |||||     
T  55018040 gatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaattttgacatttgc 55018139  T
Q  428 cagttgagttaggactt 444  Q
    |||||||||||||||||    
T  55018140 cagttgagttaggactt 55018156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 328 - 434
Target Start/End: Original strand, 9349681 - 9349788
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |  ||||| |||||||||||| || ||||| |||||    
T  9349681 agatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcacgacgtccgaccttgcaatttcggcatttg 9349780  T
Q  427 tcagttga 434  Q
     |||||||    
T  9349781 ccagttga 9349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 4601553 - 4601431
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||  | |||||||||| | |||| | |||||| ||||| || |||||     
T  4601553 gtcttagatgaactggtaatccactgaaaataaactcacacacaactgtgaggttccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 4601454  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  4601453 atttgccagttgagctaggactt 4601431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 54151681 - 54151803
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||| |||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  54151681 gtcttagatgaagtggtaatccactgaaaataaactcatacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 54151780  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  54151781 atttgccagttgagctaggactt 54151803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 54158394 - 54158272
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |  ||| | |||||| ||||| || |||||     
T  54158394 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 54158295  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  54158294 atttgccagttgagctaggactt 54158272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 28844633 - 28844510
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaat-taaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| ||||||| ||||||||  ||||||||||||||||||||||||  |||||||||||| | |||||  |||||| ||||| || |||||    
T  28844633 gtcttagatgaagtggtaatccactgaaaaataaactcacacacaactgtgaggttccaggttcgaacccgggtcacaacgtccggccttgcaatttcgg 28844534  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     |||||||||||||| ||| ||||    
T  28844533 catttgtcagttgagctagaactt 28844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 42392805 - 42392927
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||| ||||||||| | ||||||| || |  ||| | |||||||||||| || |||||     
T  42392805 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtcccgggttcgagcccggatcatgacgtccgaccttgcaatttcggc 42392904  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  42392905 atttgccagttgagctaggactt 42392927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 43247650 - 43247772
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | ||||||||||   |||||  |||||| ||||| || || ||     
T  43247650 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccaggtcacaacgtccggccttgcaattttggc 43247749  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  43247750 atttgccagttgagctaggactt 43247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 51665925 - 51666047
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||| ||||| | ||||||||||   |||| | |||||| ||||| || |||||     
T  51665925 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtaaggtcccgggttcgaacccaggtcatgacgtccggccttgcaatttcggc 51666024  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  51666025 atttgccagttgagctaggactt 51666047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 390
Target Start/End: Complemental strand, 52500966 - 52500899
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| |||||||  ||||||| |||||||||||||||||||||||| |||||||||||||    
T  52500966 gtcttagatgaagtggtaatctactgaaaataaactcacacacaactgtgaggtttcaggttcgaacc 52500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 3112995 - 3113108
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||| || | |||||||||  | || ||| |||||| ||||| || |||||     
T  3112995 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgagatcccgggttcgaactcgggttacgacgtccggccttgcaatttcggc 3113094  T
Q  422 atttgtcagttgag 435  Q
    ||||| ||||||||    
T  3113095 atttgccagttgag 3113108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 36228994 - 36229107
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| || ||||| ||||||||||||||||||||||||| | |||||||||| |  ||| | |||||| ||||| || |||||     
T  36228994 gtcttagatgaagtggtaatccattgaaaataaactcacacacaactgtgaggtcccgggttcgaacccggatcatgacgtccggccttgcaatttcggc 36229093  T
Q  422 atttgtcagttgag 435  Q
    ||||| ||||||||    
T  36229094 atttgccagttgag 36229107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 417
Target Start/End: Original strand, 475281 - 475374
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    |||| ||||||| ||||||||||||||| |||||||||||||||||||||||||  |  ||||||||| |  ||| | |||||||||||| ||||    
T  475281 gtcttagatgaagtggtaattcactgaa-ttaaactcacacacaactgtgaggttccgagttcgaacccggatcatgacgtccgaccttgcaatt 475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 373
Target Start/End: Complemental strand, 27230794 - 27230744
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtga 373  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||||||||||    
T  27230794 gtctgagatgaagtggtaattcactgaaattaaattcacacacaactgtga 27230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 32001431 - 32001493
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctg 392  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  32001431 atgaagtggtaaatcactgaaaataaactcacacacaactgtgagatctcgagttcgaacctg 32001493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 55320400 - 55320469
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctga 393  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||| ||||||| ||||||| |||||||    
T  55320400 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtc-caggttcaaacctga 55320469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 417
Target Start/End: Original strand, 38257308 - 38257397
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt 417  Q
    ||||||| ||||||| | |||||||||||||||||||||| ||||||||    ||||||||||   |||||| |||||||||||| ||||    
T  38257308 agatgaagtggtaatccgctgaaattaaactcacacacaattgtgaggttctgggttcgaacccaggtcacgacgtccgaccttgcaatt 38257397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 43775351 - 43775226
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| ||||||||||||||||| | ||||||||||| |  | | |||||||   ||||||  |||||||||||  || |||||     
T  43775351 gtcttagatgaagtggtaatccactgaaattaaactcaaatacaactgtgagattccggattcgaacgcaagtcacaacgtccgaccttacaatttcggc 43775252  T
Q  422 atttgtcagttgagttaggactttta 447  Q
    ||||| |||||||||||| |||||||    
T  43775251 atttgccagttgagttagaactttta 43775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 40756732 - 40756792
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    ||||||| ||||||   ||||||||||||||||||| ||||||||||||||| ||||||||    
T  40756732 agatgaagtggtaaactactgaaattaaactcacacgcaactgtgaggtctcgggttcgaa 40756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 29750748 - 29750627
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| ||||||| |||| ||||| ||||| |||||||||||  ||||||| | | |||||| |||||  ||||| || |||||     
T  29750748 gtcttagatgaagtggtaatccactgaatttaa-ctcacgcacaaatgtgaggtctctagttcgaatccgggtcacgacgtccagccttgcaatttcggc 29750650  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||||||| ||||    
T  29750649 atttgccagttgagttagtactt 29750627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 51054829 - 51054707
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt-cggt 421  Q
    |||| ||||||| ||||||| |||| |||||||||| ||| |||| | |||||| |   ||||||||| || |||   ||| ||||||||||||| ||      
T  51054829 gtcttagatgaagtggtaatccacttaaattaaacttacaaacaattatgaggttttgagttcgaacccgaatcataacgttcgaccttgtaatttcgac 51054730  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||||||||||||    
T  51054729 atttgtcagttgagttaggactt 51054707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 1778974 - 1778857
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt-cggtatttg 426  Q
    ||||||| ||||||| || ||||| |||| ||| |||||| ||||||||  | |||||||||| | |||||   ||||| ||||| |||| ||| |||||    
T  1778974 agatgaagtggtaatccattgaaaataaattcaaacacaattgtgaggttccgggttcgaacccgggtcacaatgtccggccttgcaatttcggcatttg 1778875  T
Q  427 tcagttgagttaggactt 444  Q
    ||||||||| ||||||||    
T  1778874 tcagttgagctaggactt 1778857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 444
Target Start/End: Original strand, 35461504 - 35461601
Alignment:
Q  348 gaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagttaggactt 444  Q
    |||| ||||||||||||||||||||||||  | |||||||||| |  ||||  |||||||||||| || ||||| ||||| |||||||| ||| ||||    
T  35461504 gaaaataaactcacacacaactgtgaggttccgggttcgaacccggatcacaacgtccgaccttgcaatttcggcatttgccagttgagctagaactt 35461601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 388
Target Start/End: Original strand, 448888 - 448940
Alignment:
Q  336 tggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa 388  Q
    ||||||| |||| |||||||||||||| ||||||||||||||  |||||||||    
T  448888 tggtaatccactaaaattaaactcacaaacaactgtgaggtcctaggttcgaa 448940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 33334714 - 33334682
Alignment:
Q  345 actgaaattaaactcacacacaactgtgaggtc 377  Q
    |||||||||||||||||||||||||||||||||    
T  33334714 actgaaattaaactcacacacaactgtgaggtc 33334682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 50729652 - 50729530
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa-cctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| |||||||  | |||||||||||||||| | ||||| ||||||||| ||||||| || || ||||| |||| ||||||  || |||||    
T  50729652 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccaga-tcacgacgtctgaccttacaatttcgg 50729554  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     |||||||||||||| ||| ||||    
T  50729553 catttgtcagttgagctagaactt 50729530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 50783197 - 50783319
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaa-cctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| |||||||  | |||||||||||||||| | ||||| ||||||||| ||||||| || || ||||| |||| ||||||  || |||||    
T  50783197 gtcttagatgaagtggtaatctattgaaattaaactcacataaaactgcgaggtctcatgttcgaatccaga-tcacgacgtctgaccttacaatttcgg 50783295  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     |||||||||||||| ||| ||||    
T  50783296 catttgtcagttgagctagaactt 50783319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 7958692 - 7958630
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    ||||||| ||||||| |||| ||| |||||| ||||| |||||||||||| | ||||||||||    
T  7958692 agatgaagtggtaatccactaaaaataaacttacacataactgtgaggtcccgggttcgaacc 7958630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 8151471 - 8151409
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||||||  |||||| || |||||||||||| ||||| ||||||||| |||| ||||||||||    
T  8151471 agatgaaccggtaatccattgaaattaaactgacacataactgtgagatctcgggttcgaacc 8151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 10639606 - 10639728
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  10639606 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 10639705  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  10639706 atttgccagttgagctaggactt 10639728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 23839987 - 23839865
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||   |||||  |||||| ||||| || || ||     
T  23839987 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccaggttcgaacccaggtcacaacgtccggccttgcaattttggc 23839888  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||||||||||||    
T  23839887 atttgccagttgagttaggactt 23839865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 33083554 - 33083676
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||| | |||||| ||||| || |||||     
T  33083554 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccggccttgcaatttcggc 33083653  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  33083654 atttgccagttgagctaggactt 33083676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 444
Target Start/End: Original strand, 40786225 - 40786331
Alignment:
Q  339 taattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagtt 437  Q
    ||||||||| ||||||||||||||| |||||| ||||||| ||||||||||| | |||||| |||||| ||||| || ||||| ||||||||||||||||    
T  40786225 taattcactaaaattaaactcacactcaactgcgaggtcttaggttcgaaccagggtcacgacgtccggccttgcaatttcggcatttgtcagttgagtt 40786324  T
Q  438 aggactt 444  Q
    | |||||    
T  40786325 atgactt 40786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 11459843 - 11459721
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| || ||||| ||||| ||||||||||||||||||| | |||||||||| | |||| | |||||||||||| || |||||     
T  11459843 gtcttagatgaagtggtaatccattgaaaataaacacacacacaactgtgaggtcccgggttcgaacccgggtcatgacgtccgaccttgcaatttcggc 11459744  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  11459743 atttgccagttgagctaggactt 11459721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 26605752 - 26605630
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| |||| |||||||||||||||||||| | |||||||||| | |||||  |||||| ||||| || |||||     
T  26605752 gtcttagatgaagtggtaatccactgaaaataaattcacacacaactgtgaggtcccgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 26605653  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  26605652 atttgccagttgagctaggactt 26605630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 34460497 - 34460375
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||    |||||||||| | |||||  |||||| ||||| || |||||     
T  34460497 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttctgggttcgaacccgggtcacaacgtccggccttgcaatttcggc 34460398  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||||||||||| ||||||||    
T  34460397 atttgtcagttgagctaggactt 34460375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 37197610 - 37197723
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| | |||||| |||||  ||||| || |||||     
T  37197610 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcccgggttcgaacccgggtcacgacgtccagccttgcaatttcggc 37197709  T
Q  422 atttgtcagttgag 435  Q
    ||||| ||||||||    
T  37197710 atttgccagttgag 37197723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 11816550 - 11816673
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaa-ctcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| ||||||| ||||||||||||| |||||| |||||||||||||  | ||||||||||   |||||| |||||||||||| || |||||    
T  11816550 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgtgaggttccgggttcgaacccaggtcacgacgtccgaccttgcaatttcgg 11816649  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     ||||| |||||||| ||||||||    
T  11816650 catttgccagttgagctaggactt 11816673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 39831444 - 39831565
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||||||||||||||||||| ||||||||| | |||||||||| |  ||| | |||||| ||||| || ||||||    
T  39831444 gtcttagatgaagtggtaaaccactgaaattaaactcacacacaattgtgaggtc-ccggttcgaacccggatcatgacgtccggccttgcaatttcggt 39831542  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  39831543 atttgccagttgagctaggactt 39831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 340 - 444
Target Start/End: Complemental strand, 16654474 - 16654369
Alignment:
Q  340 aattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgtcagttgagtta 438  Q
    |||||||| ||| ||||||||||||||||||||||||  | |||||||||  |  |||||||||||| ||||| || ||||| |||| ||||||||||||    
T  16654474 aattcactaaaaataaactcacacacaactgtgaggttccgggttcgaactcggatcacggcgtccggccttgcaatttcggcatttatcagttgagtta 16654375  T
Q  439 ggactt 444  Q
    ||||||    
T  16654374 ggactt 16654369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 328 - 447
Target Start/End: Complemental strand, 15782712 - 15782593
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||  |||||||||||||||| ||||| ||||| ||||||| |||||||||| | |||| | |||||||||||  || ||||| |||||    
T  15782712 agatgaagtggtaaaccactgaaattaaactcccacac-actgtaaggtctcgggttcgaacccgggtcatgacgtccgaccttacaatttcggcatttg 15782614  T
Q  427 tcagttgagttaggactttta 447  Q
    ||| ||||| |||||||||||    
T  15782613 tcaattgagctaggactttta 15782593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 323 - 438
Target Start/End: Original strand, 43778468 - 43778584
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| || ||||| ||||||||||||||||||||| |||| |||||||||||   |||||| | | || | ||| || ||||||    
T  43778468 gtcttagatgaagtggtaatccaatgaaaataaactcacacacaactgtgaagtcttaggttcgaacccaggtcacgacattcggctttgcaatttcggt 43778567  T
Q  422 atttgtcagttgagtta 438  Q
    |||||||||||||||||    
T  43778568 atttgtcagttgagtta 43778584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 7275886 - 7276009
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| || | |||||||| | |||||||||||||||||| | |||||||||| | | |||| | |||||||||| || |||||     
T  7275886 gtcttagatgaagtggtaatccattaaaattaaatttacacacaactgtgaggtcccgggttcgaacccgggccacgacatccgaccttgcaatttcggc 7275985  T
Q  422 a-tttgtcagttgagttaggactt 444  Q
    | ||||||||||||||||||||||    
T  7275986 attttgtcagttgagttaggactt 7276009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 39535534 - 39535656
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| | || |||||||||||||| | |||||||||||| | |||||||||| | |||||| |||||| ||||| || ||||      
T  39535534 gtcttagatgaagtggtaatccgctcaaattaaactcacataaaactgtgaggtcccgggttcgaacccgggtcacgacgtccggccttgcaatttcgac 39535633  T
Q  422 atttgtcagttgagttaggactt 444  Q
    |||||  ||||||||||||||||    
T  39535634 atttgctagttgagttaggactt 39535656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 45125165 - 45125287
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||  |  |||||||||  ||||||  |||||| ||||  || |||||     
T  45125165 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggttccgagttcgaacccaagtcacaacgtccggccttacaatttcggc 45125264  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  45125265 atttgccagttgagctaggactt 45125287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 11708801 - 11708684
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||| |||||||| ||||| |||||||||||||||||||   |||||||||| | |||||  |||||| ||||  || ||||| |||||    
T  11708801 agatgaagtggtaatccactgaaaataaacccacacacaactgtgaggtcctgggttcgaacccgggtcacaacgtccggccttacaatttcggcatttg 11708702  T
Q  427 tcagttgagttaggactt 444  Q
     |||||||| ||||||||    
T  11708701 ccagttgagctaggactt 11708684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 38440197 - 38440310
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||| |||||||||||||||| | ||  ||||||||||||||| | | | |||||| |||||| ||||| || |||||     
T  38440197 gtcttagatgaagtggtaatccactaaaattaaactcacacatagctaggaggtctcaggttcggatccgggtcacgacgtccggccttgcaatttcggc 38440296  T
Q  422 atttgtcagttgag 435  Q
    ||||||||||||||    
T  38440297 atttgtcagttgag 38440310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 29659218 - 29659285
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||   ||||||||||    
T  29659218 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggtcatgggttcgaacc 29659285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 19048882 - 19048760
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||| ||||||||||||||| ||||||||| | |||||||||| |  ||| | |||||| ||||  || |||||     
T  19048882 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 19048783  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  19048782 atttgccagttgagctaggactt 19048760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 19537435 - 19537313
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||| ||||||||||||||||||  | |||||||||| |  ||||  |||||| ||||| || |||||     
T  19537435 gtcttagatgaagtggtaatccactgaaaataaacacacacacaactgtgaggttccgggttcgaacccggatcacaacgtccggccttgcaatttcggc 19537336  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||  ||||||||    
T  19537335 atttgccagttgaactaggactt 19537313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 4851442 - 4851381
Alignment:
Q  329 gatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||||| | |||| |||||    
T  4851442 gatgaagtggtaatccactaaaattaaactcacacacaactgtgaggtcccgggtttgaacc 4851381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 27137918 - 27138039
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaattcggta 422  Q
    |||| ||||||| ||||||| ||||||||||||||||||| | |||||| ||||| | ||||||||||   ||||||  || || ||||  | ||| | |    
T  27137918 gtcttagatgaagtggtaatccactgaaattaaactcacataaaactgtaaggtcccgggttcgaacccaggtcacgatgttcggccttcaatttcagca 27138017  T
Q  423 tttgtcagttgagttaggactt 444  Q
    ||||||||||||| ||||||||    
T  27138018 tttgtcagttgagctaggactt 27138039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 323 - 376
Target Start/End: Complemental strand, 42578296 - 42578243
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggt 376  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  42578296 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactgtgaggt 42578243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 444
Target Start/End: Complemental strand, 43684192 - 43684075
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttg 426  Q
    ||||||| ||||||| || ||||| |||||||||||| || |||| |||| | ||||||||||   |||| || ||||| ||||| || ||||| |||||    
T  43684192 agatgaagtggtaatccagtgaaaataaactcacacataattgtggggtcccgggttcgaacccatgtcatggtgtccggccttgcaatttcggcatttg 43684093  T
Q  427 tcagttgagttaggactt 444  Q
    ||||||||| ||||||||    
T  43684092 tcagttgagataggactt 43684075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 19816348 - 19816226
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaatt-cggt 421  Q
    |||| ||||||| | |||||  ||||||| |||||||| ||||||||| |||||  | ||||| |||| | |||||  |||||| ||||| |||| ||||    
T  19816348 gtcttagatgaagttgtaatctactgaaaataaactcatacacaactgcgaggttccgggttcaaacccgggtcacaacgtccggccttgcaatttcggt 19816249  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  19816248 atttgccagttgagctaggactt 19816226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 377
Target Start/End: Complemental strand, 33001830 - 33001776
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtc 377  Q
    |||| ||||||| ||||||| ||||||||||||||||||| | ||||||||||||    
T  33001830 gtcttagatgaaatggtaatccactgaaattaaactcacatataactgtgaggtc 33001776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 4800999 - 4800938
Alignment:
Q  328 agatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaac 389  Q
    ||||||| ||||||||||||| ||||||||||||||| ||| | |||||  | |||||||||    
T  4800999 agatgaagtggtaattcactggaattaaactcacacataaccgcgaggttccgggttcgaac 4800938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 387
Target Start/End: Complemental strand, 21312331 - 21312269
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcga 387  Q
    |||| ||||||| |||||||||||| ||| ||||||||  ||||| ||||||||| |||||||||    
T  21312331 gtcttagatgaagtggtaattcactaaaaataaactca--cacaattgtgaggtcccaggttcga 21312269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 344 - 376
Target Start/End: Complemental strand, 12366835 - 12366803
Alignment:
Q  344 cactgaaattaaactcacacacaactgtgaggt 376  Q
    |||||| ||||||||||||||||||||||||||    
T  12366835 cactgatattaaactcacacacaactgtgaggt 12366803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 444
Target Start/End: Original strand, 34239827 - 34239942
Alignment:
Q  330 atgaattggtaattcactgaaattaaactcacacacaactgtgagg-tctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggtatttgt 427  Q
    ||||| |||||||| | |||||||||||||| |||||||||| ||| ||| | ||||||||  |||||||| |||| ||||||  || ||||| |||||     
T  34239827 atgaagtggtaatttattgaaattaaactcatacacaactgtaaggttctga-gttcgaactcgagtcacgacgtctgaccttacaatttcggcatttgc 34239925  T
Q  428 cagttgagttaggactt 444  Q
     ||| ||||||||||||    
T  34239926 tagtagagttaggactt 34239942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 323 - 444
Target Start/End: Original strand, 9973 - 10095
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||| ||||||||||||||||| ||||||| | |||||||||| | || ||| |||||| ||||| || |||||     
T  9973 gtcttagatgaagtggtaatccactgaaaataaactcacacacaactatgaggtcccgggttcgaacccgggttacgacgtccggccttgcaatttcggc 10072  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  10073 atttgccagttgagctaggactt 10095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 435
Target Start/End: Complemental strand, 22291 - 22178
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||| | || ||||||| | |||||| |||||| ||||  || |||||     
T  22291 gtcttagatgaagtggtaatccactgaaattaaactcacacgcaactgtgaggtcccgggctcgaacccgggtcacgacgtccggccttacaatttcggc 22192  T
Q  422 atttgtcagttgag 435  Q
    ||||||||||||||    
T  22191 atttgtcagttgag 22178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 390
Target Start/End: Original strand, 8943 - 9010
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacc 390  Q
    |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||    
T  8943 gtcttagatgaagtggtaaatcactgaaattaaactcacacacaactgtgaggtcctaggttcgaacc 9010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 114380 - 114258
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaattaaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcggt 421  Q
    |||| ||||||| ||||||  |||||||| ||||||||||||||| ||||||||| | |||||||||| |  ||| | |||||| ||||  || |||||     
T  114380 gtcttagatgaagtggtaaaccactgaaactaaactcacacacaattgtgaggtcccgggttcgaacccggatcatgacgtccggccttacaatttcggc 114281  T
Q  422 atttgtcagttgagttaggactt 444  Q
    ||||| |||||||| ||||||||    
T  114280 atttgccagttgagctaggactt 114258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 34947 - 34824
Alignment:
Q  323 gtctaagatgaattggtaattcactgaaatt-aaactcacacacaactgtgaggtctcaggttcgaacctgagtcacggcgtccgaccttgtaa-ttcgg 420  Q
    |||| ||||||| ||||||| |||||||||| ||||||||| ||||||| ||||||   | ||||||||   |||||| |||||| ||||| || |||||    
T  34947 gtcttagatgaagtggtaatccactgaaattaaaactcacatacaactgcgaggtcctggattcgaacccatgtcacgacgtccggccttgcaatttcgg 34848  T
Q  421 tatttgtcagttgagttaggactt 444  Q
     ||||| |||||||| ||||||||    
T  34847 catttgccagttgagctaggactt 34824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 390
Target Start/End: Complemental strand, 14785 - 14728
Alignment:
Q  335 ttggtaattcactgaaattaaactc--acacacaactgtgaggtctcaggttcgaacc 390  Q
    |||||||||||||||||||||||||  |||||||| ||||||||  | ||||||||||    
T  14785 ttggtaattcactgaaattaaactcagacacacaattgtgaggttccgggttcgaacc 14728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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