View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2748_high_6 (Length: 650)
Name: NF2748_high_6
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2748_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 606; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 606; E-Value: 0
Query Start/End: Original strand, 17 - 638
Target Start/End: Complemental strand, 7864225 - 7863604
Alignment:
| Q |
17 |
acctaccagtgctcttgatgccgagtcagaagctgcagttcaaagggccattgacaagatttcagcaggaagaacaaccattgtcattgctcacaggata |
116 |
Q |
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| T |
7864225 |
acctaccagtgctcttgatgccgagtcagaagctgcagttcaaagggccattgacaagatttcagcaggaagaacaaccattgtcattgctcacaggata |
7864126 |
T |
|
| Q |
117 |
gcaacagtgaagaatgctgattccatagtagttcttgaacatggttctgtcaccgagattggcgaccatcgccagcttatgtcgaaagccggaacctact |
216 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7864125 |
gcaacagtgaagaatgctgattccattgtagttcttgaacatggttctgtcaccgagattggcgaccatcgccagcttatgtcgaaagctggaacctact |
7864026 |
T |
|
| Q |
217 |
tcaaccttgtcaaacttgcaactgaatccatttcaaaacctcttcctacagaaaataacatgcaaaaaaccaaagatttatcatccatcaataataaata |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
7864025 |
tcaaccttgtcaaacttgcaactgaatccatttcaaaacctcttcctacagaaaataacatgcaaataaccaaagatttatcatccatcaataataaata |
7863926 |
T |
|
| Q |
317 |
tgctcctgatatagcaaagtcaagttatctagtcgatatctcgcgctctaaattggaagattcaatgcaggatgagaatcaagaagatattgaagataaa |
416 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7863925 |
tgctcctgatatagcaaagtcaagttatctagtcgatatctcgcgctctaaattggaagattcaatgcaggatgagaatcaagaagatattgaagataaa |
7863826 |
T |
|
| Q |
417 |
aaatataaaaagtcaagaaattacaaactttctgaggtatggaaattgcaaaagccagagtttatgatgctaatttcaggcctagttatgggaatgtttg |
516 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7863825 |
aaatataaaaagtcaagaaattacaaactttctgaggtatggaaattgcaaaagccggagtttatgatgctaatttcaggcctagttatgggaatgtttg |
7863726 |
T |
|
| Q |
517 |
ccggcgcttgtctttccctttttccattggttttaggcatatcccttggagtatattttagcgacgacacttcaaaaatgaaaagagatgtagggtacct |
616 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7863725 |
ccggcgcttgtctttccctttttccattggttttaggcatatcccttggagtatattttagcgacgacacttcaaaaatgaaaagagatgtagggtacct |
7863626 |
T |
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| Q |
617 |
ttgtttagtacttgtcggcctt |
638 |
Q |
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|||||||||||||||||||||| |
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| T |
7863625 |
ttgtttagtacttgtcggcctt |
7863604 |
T |
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