View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2748_high_75 (Length: 270)
Name: NF2748_high_75
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2748_high_75 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 12 - 253
Target Start/End: Complemental strand, 36040850 - 36040611
Alignment:
| Q |
12 |
tgaaatgaaatgaggttatgaaaagtttacaaatatttattgaaaatgattcattagacaagaagaccaaattagagaaatgcatactcgtatttctgcc |
111 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36040850 |
tgaaataaaatgaggttatgaaaagtttacaaatatttattgaaaatgattcattagacaagaagaccaaattagagaaatgcatactcgtatttctgcc |
36040751 |
T |
|
| Q |
112 |
caacctaccaatagataacctaaagaaagcaataagggcgcactacacccagcaacaagtacctcactgaagtagggatggaaatgtgataagttactat |
211 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36040750 |
caacctaccaatagataacctaaagaaagcaataagg--gcactacacccagcaacaagtacctcactgaagtagggatggaaatgtgataagttactat |
36040653 |
T |
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| Q |
212 |
aggacatgtcttatatccatattttgaaaaaatgtcgaaatt |
253 |
Q |
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||||||||||||||| |||||||||||||||||||||||||| |
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| T |
36040652 |
aggacatgtcttatacccatattttgaaaaaatgtcgaaatt |
36040611 |
T |
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