View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2748_low_103 (Length: 240)
Name: NF2748_low_103
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2748_low_103 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 46489803 - 46489587
Alignment:
| Q |
8 |
gttcaattagtatacattaatatttgttaaactattttaagaattgatatataacaaagttatgtgtatctcttttttatacacagtacgtaaaattaaa |
107 |
Q |
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| T |
46489803 |
gttcaattagtatacattaatatttgttatactattttaagaattgatatataacaaagttatgtgtatctcttttttatacacagtacgtaaaattaaa |
46489704 |
T |
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| Q |
108 |
tcctaaattcatttggtatgagtttaatccaaactttaggtgttgaacttgataaataaatggagactgatgtgttgccttgtcaaatttgtaaatgctt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46489703 |
tcctaaattcatttggtatgagtttaatccaaactttaggtgttgaacttgataaataaatggagactgatgtgttgccttgtcaaatttgtaaatgctt |
46489604 |
T |
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| Q |
208 |
atgaataacgaccatcc |
224 |
Q |
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||||||||||||||||| |
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| T |
46489603 |
atgaataacgaccatcc |
46489587 |
T |
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