View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2748_low_44 (Length: 389)

Name: NF2748_low_44
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2748_low_44
NF2748_low_44
[»] chr3 (52 HSPs)
chr3 (225-370)||(43808534-43808679)
chr3 (16-223)||(39655185-39655404)
chr3 (16-223)||(44252704-44252923)
chr3 (16-223)||(7469690-7469909)
chr3 (16-223)||(29284293-29284512)
chr3 (16-223)||(44953347-44953566)
chr3 (16-223)||(49580021-49580240)
chr3 (52-223)||(39728675-39728847)
chr3 (52-223)||(23546860-23547026)
chr3 (16-223)||(52572566-52572785)
chr3 (52-192)||(44639278-44639418)
chr3 (52-185)||(52198159-52198292)
chr3 (54-223)||(48390729-48390899)
chr3 (52-223)||(54317148-54317320)
chr3 (57-222)||(22535754-22535920)
chr3 (51-188)||(4557253-4557390)
chr3 (51-188)||(34119659-34119796)
chr3 (52-223)||(4015956-4016128)
chr3 (52-188)||(48305589-48305725)
chr3 (54-175)||(23580833-23580954)
chr3 (52-223)||(42758378-42758550)
chr3 (16-155)||(44172583-44172733)
chr3 (16-155)||(44179283-44179433)
chr3 (54-222)||(34025960-34026129)
chr3 (24-222)||(23153978-23154187)
chr3 (52-223)||(53631908-53632080)
chr3 (57-223)||(29842317-29842483)
chr3 (52-185)||(19111738-19111871)
chr3 (54-175)||(34154420-34154541)
chr3 (68-188)||(43582597-43582717)
chr3 (51-185)||(831012-831139)
chr3 (16-188)||(44106742-44106923)
chr3 (24-188)||(6738353-6738517)
chr3 (16-192)||(17146098-17146281)
chr3 (52-192)||(42243391-42243531)
chr3 (54-184)||(10043234-10043364)
chr3 (52-220)||(49025685-49025841)
chr3 (92-187)||(10371222-10371323)
chr3 (51-192)||(30904762-30904900)
chr3 (56-188)||(3385804-3385936)
chr3 (71-194)||(27252588-27252710)
chr3 (137-223)||(29858487-29858574)
chr3 (16-136)||(10823696-10823824)
chr3 (101-186)||(20087050-20087135)
chr3 (133-220)||(31126746-31126834)
chr3 (85-188)||(3414485-3414588)
chr3 (54-173)||(30616244-30616363)
chr3 (52-105)||(31126826-31126879)
chr3 (140-192)||(38347658-38347710)
chr3 (122-186)||(40890414-40890478)
chr3 (78-189)||(41936966-41937071)
chr3 (16-57)||(49025638-49025679)
[»] chr6 (44 HSPs)
chr6 (16-223)||(27534641-27534860)
chr6 (16-223)||(3483835-3484054)
chr6 (16-221)||(32853801-32854018)
chr6 (52-220)||(5863298-5863467)
chr6 (52-223)||(2367330-2367502)
chr6 (52-223)||(10187992-10188157)
chr6 (52-223)||(10142430-10142602)
chr6 (52-223)||(12141389-12141561)
chr6 (78-223)||(31496464-31496610)
chr6 (78-223)||(31501850-31501996)
chr6 (79-223)||(30986284-30986429)
chr6 (52-184)||(32053092-32053218)
chr6 (52-223)||(15498328-15498500)
chr6 (52-192)||(24225702-24225848)
chr6 (16-188)||(27738729-27738912)
chr6 (24-175)||(32532505-32532667)
chr6 (59-188)||(9442441-9442569)
chr6 (52-189)||(30816264-30816399)
chr6 (51-215)||(14254961-14255125)
chr6 (52-186)||(12678044-12678178)
chr6 (51-184)||(28079648-28079781)
chr6 (52-188)||(256440-256576)
chr6 (52-175)||(11762449-11762572)
chr6 (52-128)||(14410863-14410939)
chr6 (52-188)||(12309576-12309718)
chr6 (52-185)||(13769076-13769209)
chr6 (51-126)||(20349067-20349142)
chr6 (51-174)||(9458666-9458789)
chr6 (52-175)||(29341260-29341383)
chr6 (54-174)||(20610944-20611064)
chr6 (57-189)||(14506095-14506215)
chr6 (52-111)||(24602881-24602940)
chr6 (56-188)||(32959868-32959988)
chr6 (52-174)||(18908897-18909019)
chr6 (52-160)||(9458862-9458970)
chr6 (63-186)||(34178285-34178402)
chr6 (67-103)||(14034521-14034557)
chr6 (140-191)||(7393844-7393895)
chr6 (52-111)||(19367013-19367072)
chr6 (52-126)||(7393897-7393971)
chr6 (138-223)||(24602780-24602866)
chr6 (52-126)||(29199895-29199969)
chr6 (16-57)||(5863473-5863514)
chr6 (16-57)||(10142608-10142649)
[»] chr5 (54 HSPs)
chr5 (16-223)||(5908601-5908820)
chr5 (24-222)||(20973410-20973609)
chr5 (16-223)||(4920783-4921002)
chr5 (54-188)||(4583125-4583259)
chr5 (63-223)||(33727914-33728075)
chr5 (54-192)||(12866496-12866634)
chr5 (54-188)||(29245900-29246034)
chr5 (54-186)||(17853244-17853375)
chr5 (52-223)||(10127085-10127250)
chr5 (24-223)||(15890172-15890382)
chr5 (54-192)||(12834519-12834657)
chr5 (52-223)||(40517810-40517982)
chr5 (52-223)||(42987393-42987564)
chr5 (52-192)||(30996600-30996739)
chr5 (52-221)||(22694817-22694986)
chr5 (24-223)||(13401917-13402127)
chr5 (57-187)||(6369705-6369834)
chr5 (58-186)||(16311244-16311372)
chr5 (16-188)||(6092478-6092650)
chr5 (52-174)||(28568984-28569106)
chr5 (52-184)||(6155873-6156003)
chr5 (52-173)||(38972926-38973047)
chr5 (105-221)||(3564655-3564770)
chr5 (52-111)||(35194015-35194074)
chr5 (56-174)||(23044954-23045072)
chr5 (68-185)||(18207038-18207155)
chr5 (57-188)||(35311831-35311953)
chr5 (130-192)||(42717575-42717637)
chr5 (24-175)||(28045621-28045782)
chr5 (55-127)||(10822536-10822608)
chr5 (52-175)||(2412688-2412811)
chr5 (51-128)||(2985150-2985227)
chr5 (52-192)||(2681220-2681360)
chr5 (51-107)||(38006499-38006555)
chr5 (54-105)||(1218761-1218812)
chr5 (52-111)||(12447385-12447444)
chr5 (51-150)||(27900388-27900487)
chr5 (52-192)||(40187602-40187741)
chr5 (52-127)||(12712567-12712642)
chr5 (135-189)||(33420295-33420349)
chr5 (139-184)||(12457596-12457641)
chr5 (96-193)||(39422394-39422491)
chr5 (64-120)||(8453390-8453446)
chr5 (52-127)||(12773831-12773906)
chr5 (150-197)||(18451863-18451910)
chr5 (52-110)||(6810162-6810220)
chr5 (138-223)||(12447459-12447544)
chr5 (130-187)||(1218807-1218864)
chr5 (24-57)||(12866642-12866675)
chr5 (24-57)||(17853383-17853416)
chr5 (16-57)||(42987570-42987611)
chr5 (24-56)||(3564820-3564852)
chr5 (100-164)||(24207736-24207800)
chr5 (52-124)||(29664975-29665047)
[»] chr2 (46 HSPs)
chr2 (52-223)||(30846951-30847123)
chr2 (16-221)||(24414046-24414263)
chr2 (52-223)||(36128018-36128190)
chr2 (16-223)||(9632344-9632563)
chr2 (26-188)||(37106666-37106833)
chr2 (16-216)||(13830694-13830905)
chr2 (56-223)||(13705267-13705441)
chr2 (58-190)||(45115569-45115703)
chr2 (55-188)||(37472707-37472840)
chr2 (54-193)||(7314591-7314730)
chr2 (16-188)||(10208379-10208561)
chr2 (16-175)||(8915899-8916068)
chr2 (52-184)||(44746061-44746193)
chr2 (51-223)||(10920649-10920815)
chr2 (57-223)||(6027813-6027968)
chr2 (16-188)||(37999441-37999618)
chr2 (95-192)||(12341648-12341745)
chr2 (24-188)||(12193775-12193950)
chr2 (52-223)||(19104749-19104925)
chr2 (52-185)||(35248336-35248469)
chr2 (56-164)||(45256832-45256940)
chr2 (52-185)||(31942136-31942270)
chr2 (52-154)||(38342501-38342603)
chr2 (239-304)||(41579417-41579482)
chr2 (52-154)||(43371558-43371660)
chr2 (100-173)||(18106082-18106155)
chr2 (299-370)||(41579499-41579568)
chr2 (52-174)||(14331532-14331648)
chr2 (55-174)||(24051586-24051705)
chr2 (56-111)||(25210386-25210441)
chr2 (52-111)||(42798013-42798072)
chr2 (54-174)||(15546751-15546871)
chr2 (54-174)||(22900801-22900921)
chr2 (44-174)||(26755737-26755867)
chr2 (70-128)||(14540804-14540862)
chr2 (134-223)||(42797913-42798002)
chr2 (16-57)||(10920603-10920644)
chr2 (74-111)||(16226762-16226799)
chr2 (52-120)||(3547171-3547239)
chr2 (52-108)||(4961479-4961535)
chr2 (141-188)||(35965416-35965463)
chr2 (16-57)||(36128196-36128238)
chr2 (132-174)||(42102646-42102688)
chr2 (70-127)||(33175252-33175309)
chr2 (52-128)||(17845399-17845475)
chr2 (52-96)||(18485653-18485697)
[»] chr8 (48 HSPs)
chr8 (52-223)||(32303065-32303237)
chr8 (16-223)||(24927906-24928125)
chr8 (27-217)||(4230648-4230839)
chr8 (52-223)||(20399596-20399768)
chr8 (57-188)||(27932422-27932553)
chr8 (54-191)||(29108767-29108904)
chr8 (54-186)||(40248321-40248453)
chr8 (16-175)||(45236022-45236192)
chr8 (54-191)||(39445521-39445658)
chr8 (51-192)||(34777069-34777204)
chr8 (52-223)||(1012623-1012794)
chr8 (52-188)||(17469259-17469383)
chr8 (51-189)||(24568941-24569078)
chr8 (51-223)||(1063510-1063689)
chr8 (82-221)||(5858566-5858706)
chr8 (24-175)||(24869985-24870147)
chr8 (24-187)||(17220682-17220851)
chr8 (52-189)||(27777145-27777282)
chr8 (52-188)||(37960910-37961046)
chr8 (63-192)||(35215551-35215679)
chr8 (51-188)||(43113574-43113711)
chr8 (52-185)||(14687403-14687536)
chr8 (52-182)||(34139452-34139580)
chr8 (97-186)||(2075784-2075873)
chr8 (54-190)||(11254961-11255090)
chr8 (52-192)||(14155536-14155676)
chr8 (52-188)||(30481369-30481505)
chr8 (54-105)||(2075864-2075915)
chr8 (55-174)||(15068550-15068668)
chr8 (52-223)||(14186324-14186484)
chr8 (52-127)||(8545358-8545433)
chr8 (135-223)||(29416099-29416188)
chr8 (71-175)||(6388477-6388581)
chr8 (54-118)||(33631917-33631981)
chr8 (51-189)||(5700359-5700485)
chr8 (52-172)||(17084077-17084191)
chr8 (57-174)||(27056517-27056634)
chr8 (52-173)||(28345495-28345616)
chr8 (16-57)||(28977204-28977245)
chr8 (16-57)||(2075924-2075965)
chr8 (89-174)||(15173842-15173927)
chr8 (51-111)||(30904049-30904109)
chr8 (141-188)||(36131877-36131924)
chr8 (85-127)||(9642360-9642402)
chr8 (57-155)||(34021485-34021583)
chr8 (24-57)||(29108912-29108945)
chr8 (24-57)||(40248461-40248494)
chr8 (78-150)||(29089811-29089883)
[»] chr4 (76 HSPs)
chr4 (225-370)||(37148181-37148326)
chr4 (16-221)||(7608933-7609150)
chr4 (52-223)||(6382185-6382357)
chr4 (52-223)||(44317545-44317717)
chr4 (23-223)||(5902533-5902739)
chr4 (16-223)||(11122782-11123001)
chr4 (16-223)||(43893191-43893409)
chr4 (52-223)||(11028083-11028255)
chr4 (52-223)||(31918471-31918643)
chr4 (23-188)||(21423831-21424007)
chr4 (16-223)||(55826536-55826756)
chr4 (52-188)||(15987211-15987347)
chr4 (52-188)||(47550302-47550438)
chr4 (16-223)||(48459444-48459663)
chr4 (52-223)||(26564841-26565013)
chr4 (54-223)||(39046964-39047134)
chr4 (52-221)||(6481950-6482120)
chr4 (54-188)||(31752468-31752602)
chr4 (52-185)||(32585499-32585626)
chr4 (54-174)||(10302096-10302216)
chr4 (101-223)||(37349171-37349294)
chr4 (67-185)||(37107436-37107553)
chr4 (52-188)||(19883005-19883141)
chr4 (52-190)||(19534465-19534597)
chr4 (52-189)||(42299800-42299935)
chr4 (52-140)||(1724307-1724395)
chr4 (54-154)||(47239368-47239468)
chr4 (52-127)||(32596194-32596269)
chr4 (52-188)||(21956763-21956899)
chr4 (73-185)||(39086188-39086300)
chr4 (52-167)||(25941148-25941263)
chr4 (88-186)||(7985076-7985174)
chr4 (52-154)||(14605908-14606010)
chr4 (71-189)||(33615277-33615395)
chr4 (57-192)||(4741162-4741296)
chr4 (75-186)||(7334148-7334258)
chr4 (52-127)||(12825471-12825546)
chr4 (52-174)||(45065259-45065381)
chr4 (138-223)||(53906251-53906337)
chr4 (34-175)||(11696811-11696951)
chr4 (52-164)||(35304489-35304601)
chr4 (52-188)||(39375288-39375424)
chr4 (52-144)||(42907896-42907988)
chr4 (85-173)||(43309526-43309614)
chr4 (67-166)||(15733497-15733596)
chr4 (89-188)||(19548887-19548985)
chr4 (52-127)||(29527822-29527897)
chr4 (52-174)||(1866512-1866634)
chr4 (74-192)||(30672993-30673111)
chr4 (52-189)||(36919133-36919270)
chr4 (52-160)||(47103748-47103856)
chr4 (52-127)||(31782623-31782698)
chr4 (98-188)||(1724219-1724308)
chr4 (60-174)||(31415894-31416008)
chr4 (134-222)||(425855-425943)
chr4 (73-126)||(36306816-36306869)
chr4 (55-111)||(3737789-3737845)
chr4 (52-144)||(9929160-9929252)
chr4 (63-175)||(12075594-12075705)
chr4 (101-188)||(12505489-12505577)
chr4 (52-120)||(21544589-21544657)
chr4 (138-185)||(568489-568536)
chr4 (52-107)||(30266360-30266415)
chr4 (52-107)||(30285773-30285828)
chr4 (52-110)||(9230292-9230350)
chr4 (16-57)||(31918649-31918691)
chr4 (58-96)||(53906346-53906384)
chr4 (68-189)||(8843753-8843874)
chr4 (68-189)||(8856717-8856838)
chr4 (16-57)||(47550444-47550485)
chr4 (132-193)||(50375864-50375925)
chr4 (138-190)||(9280847-9280899)
chr4 (52-104)||(10574452-10574504)
chr4 (141-185)||(20819589-20819633)
chr4 (138-174)||(29527896-29527932)
chr4 (138-190)||(39188598-39188650)
[»] chr7 (69 HSPs)
chr7 (16-223)||(21702621-21702840)
chr7 (51-188)||(30650639-30650776)
chr7 (52-223)||(35074479-35074651)
chr7 (54-223)||(10072477-10072647)
chr7 (16-188)||(16866131-16866314)
chr7 (16-223)||(24753137-24753344)
chr7 (16-223)||(45885677-45885896)
chr7 (16-188)||(18125176-18125359)
chr7 (52-223)||(7780017-7780189)
chr7 (16-223)||(17851816-17852033)
chr7 (52-223)||(18825778-18825956)
chr7 (54-223)||(17885476-17885646)
chr7 (52-220)||(16079022-16079191)
chr7 (62-188)||(39455963-39456089)
chr7 (52-188)||(27850280-27850410)
chr7 (56-192)||(45380120-45380255)
chr7 (57-223)||(3226858-3227025)
chr7 (52-186)||(12980386-12980520)
chr7 (52-223)||(25905638-25905809)
chr7 (56-223)||(38152900-38153067)
chr7 (54-223)||(39317006-39317176)
chr7 (56-192)||(43507458-43507594)
chr7 (51-186)||(5377093-5377228)
chr7 (74-188)||(37182305-37182419)
chr7 (24-223)||(44734271-44734480)
chr7 (52-188)||(38139740-38139876)
chr7 (52-188)||(3157092-3157227)
chr7 (52-188)||(37579271-37579406)
chr7 (52-185)||(2630525-2630657)
chr7 (56-164)||(45708843-45708945)
chr7 (58-174)||(8906551-8906667)
chr7 (68-188)||(41741398-41741518)
chr7 (68-223)||(24425405-24425549)
chr7 (57-187)||(41103670-41103794)
chr7 (100-188)||(44658415-44658503)
chr7 (101-189)||(44985865-44985952)
chr7 (52-188)||(3920547-3920671)
chr7 (85-188)||(37218047-37218150)
chr7 (113-223)||(44785170-44785281)
chr7 (51-127)||(25979926-25980002)
chr7 (101-224)||(37195920-37196044)
chr7 (52-111)||(26622960-26623019)
chr7 (55-174)||(27063346-27063465)
chr7 (52-174)||(27063147-27063269)
chr7 (54-184)||(27896427-27896557)
chr7 (52-160)||(22973397-22973505)
chr7 (56-223)||(26004398-26004554)
chr7 (71-174)||(42908003-42908106)
chr7 (141-192)||(43550373-43550424)
chr7 (52-111)||(44794053-44794111)
chr7 (52-126)||(16811739-16811812)
chr7 (51-192)||(25782858-25782992)
chr7 (57-174)||(33841092-33841208)
chr7 (54-174)||(5565269-5565389)
chr7 (52-160)||(18683983-18684091)
chr7 (52-120)||(32546201-32546269)
chr7 (140-187)||(23457156-23457203)
chr7 (52-174)||(30839095-30839218)
chr7 (141-187)||(19439971-19440017)
chr7 (138-188)||(23533564-23533614)
chr7 (52-154)||(31426017-31426119)
chr7 (54-127)||(10995843-10995916)
chr7 (52-187)||(23475224-23475347)
chr7 (16-57)||(30650593-30650634)
chr7 (67-175)||(23329012-23329120)
chr7 (52-107)||(29157358-29157413)
chr7 (16-54)||(37196091-37196129)
chr7 (16-57)||(16811692-16811733)
chr7 (16-57)||(44794117-44794158)
[»] chr1 (54 HSPs)
chr1 (16-223)||(23490683-23490902)
chr1 (52-223)||(36187132-36187304)
chr1 (57-222)||(19572425-19572591)
chr1 (23-223)||(49250685-49250897)
chr1 (24-223)||(5181011-5181216)
chr1 (27-188)||(24710827-24710988)
chr1 (16-223)||(24236673-24236892)
chr1 (52-223)||(51421863-51422035)
chr1 (52-223)||(29936421-29936599)
chr1 (52-223)||(34611078-34611250)
chr1 (58-187)||(16408953-16409082)
chr1 (16-223)||(42439582-42439801)
chr1 (52-148)||(28297939-28298035)
chr1 (54-223)||(17134954-17135124)
chr1 (24-220)||(42707752-42707953)
chr1 (52-221)||(44615389-44615559)
chr1 (52-221)||(44793010-44793180)
chr1 (54-223)||(45866098-45866267)
chr1 (24-223)||(50426567-50426778)
chr1 (52-188)||(34673230-34673366)
chr1 (89-223)||(23968621-23968756)
chr1 (24-188)||(39616269-39616433)
chr1 (52-188)||(9982838-9982974)
chr1 (57-192)||(40087408-40087542)
chr1 (52-186)||(12495015-12495149)
chr1 (54-188)||(18354028-18354162)
chr1 (52-224)||(29871197-29871369)
chr1 (24-215)||(35936749-35936940)
chr1 (57-175)||(10778528-10778646)
chr1 (132-223)||(20774651-20774743)
chr1 (57-136)||(3627985-3628064)
chr1 (52-223)||(16433091-16433248)
chr1 (106-223)||(13390456-13390573)
chr1 (48-174)||(19003628-19003753)
chr1 (52-154)||(23058471-23058573)
chr1 (64-192)||(13798255-13798383)
chr1 (71-158)||(33293509-33293596)
chr1 (54-173)||(34085242-34085361)
chr1 (24-136)||(34060025-34060143)
chr1 (52-111)||(48125708-48125767)
chr1 (100-190)||(13020646-13020736)
chr1 (54-156)||(17091939-17092041)
chr1 (139-192)||(2514850-2514903)
chr1 (130-223)||(34059060-34059154)
chr1 (69-127)||(44632150-44632208)
chr1 (52-89)||(49741054-49741091)
chr1 (52-192)||(16237248-16237388)
chr1 (57-93)||(23966883-23966919)
chr1 (52-223)||(35069802-35069973)
chr1 (16-57)||(20774590-20774632)
chr1 (146-188)||(28298045-28298087)
chr1 (130-188)||(48576060-48576118)
chr1 (24-57)||(17092049-17092082)
chr1 (24-57)||(45866275-45866308)
[»] scaffold0036 (1 HSPs)
scaffold0036 (52-223)||(33397-33575)
[»] scaffold0022 (1 HSPs)
scaffold0022 (51-223)||(90600-90768)
[»] scaffold0027 (1 HSPs)
scaffold0027 (89-223)||(7738-7872)
[»] scaffold0795 (1 HSPs)
scaffold0795 (91-172)||(267-348)
[»] scaffold0519 (1 HSPs)
scaffold0519 (54-190)||(10303-10432)
[»] scaffold0014 (1 HSPs)
scaffold0014 (89-185)||(14135-14230)
[»] scaffold0005 (1 HSPs)
scaffold0005 (52-154)||(211368-211470)
[»] scaffold0059 (1 HSPs)
scaffold0059 (52-107)||(70099-70154)
[»] scaffold0013 (2 HSPs)
scaffold0013 (52-154)||(105451-105553)
scaffold0013 (52-154)||(128103-128205)
[»] scaffold0008 (2 HSPs)
scaffold0008 (52-174)||(67753-67875)
scaffold0008 (52-174)||(75596-75718)
[»] scaffold0294 (1 HSPs)
scaffold0294 (52-185)||(14779-14912)
[»] scaffold0184 (1 HSPs)
scaffold0184 (52-154)||(2973-3075)
[»] scaffold0157 (1 HSPs)
scaffold0157 (101-188)||(14900-14988)
[»] scaffold0189 (1 HSPs)
scaffold0189 (52-111)||(4262-4321)
[»] scaffold0135 (1 HSPs)
scaffold0135 (52-110)||(36158-36216)
[»] scaffold0182 (1 HSPs)
scaffold0182 (52-120)||(16971-17039)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-166)||(107361-107437)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 225 - 370
Target Start/End: Complemental strand, 43808679 - 43808534
Alignment:
Q  225 cttcatatggccttatgcgctaccgatttaatgcaatggtgctatcaagttaaacttttggtataacccatgcaaatatgtcagtttccaatgcaagtct 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43808679 cttcatatgcccttatgcgctaccgatttaatgcaatggtgctatcaagttaaacttttggtataacccatgcaaatatgtcagtttccaatgcaagtct 43808580  T
Q  325 ctctatacatccaaagttaaatatatacatttccatacatgctgca 370  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  43808579 ctctatacatccaaagttaaatatatacatttccatacatgctgca 43808534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 39655404 - 39655185
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39655404 ataacataacatatcaacataaagtagttttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacc 39655305  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||| | ||    
T  39655304 cgtgttttgagatcggggaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 39655205  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  39655204 atgggttttgttgccatgcc 39655185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 44252704 - 44252923
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||||||||||| |||||           |||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  44252704 ataacataacatatcaacataaagtagttttttatatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacc 44252803  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||||| | ||    
T  44252804 cgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatttggtttgattcggacgggtaaccacgggt 44252903  T
Q  204 atagattttgttgccatgcc 223  Q
    || |||||||||||||||||    
T  44252904 atggattttgttgccatgcc 44252923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 7469909 - 7469690
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||| |||||||||||| |||||||||||||           |||||||| ||||||||||||||||||||||||||||||||||||||    
T  7469909 ataacataacatatccacataaagtagtgttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 7469810  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||| | ||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||| | ||    
T  7469809 cgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 7469710  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  7469709 atgggttttgttgccatgcc 7469690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 29284293 - 29284512
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacat-----------ttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||||||||||||||           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  29284293 ataacataacatatcaacataaagtagttttttacatctgggacgggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacc 29284392  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||||||||||||  |||||  ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| | ||    
T  29284393 cgtgtttcgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 29284492  T
Q  204 atagattttgttgccatgcc 223  Q
    ||   |||||||||||||||    
T  29284493 atgagttttgttgccatgcc 29284512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 44953566 - 44953347
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           |||| ||| |||||| |||||||||||||||||||||||||||||||    
T  44953566 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacc 44953467  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||  ||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| |  |||||||| | ||    
T  44953466 cgtgttttgagatcggggaaaacccatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggt 44953367  T
Q  204 atagattttgttgccatgcc 223  Q
    ||  ||||||||||||||||    
T  44953366 atgaattttgttgccatgcc 44953347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 49580021 - 49580240
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||| |||||||| |||||||||||||||           |||||||| | ||||||||||||||||| ||||||||||||||||||    
T  49580021 ataacataacatatcaatataaagtaattttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacc 49580120  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    ||||||| |||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| ||| |||||| | ||    
T  49580121 cgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggt 49580220  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||| ||||||    
T  49580221 atgggttttgttgtcatgcc 49580240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 39728675 - 39728847
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||  |||||| ||||| |||||||||||||| ||    
T  39728675 tttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctatactcatacccaaacccagtc 39728774  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||| |||||||||| | |||||||||||| |||||||| | |||| | |||||||||||||||    
T  39728775 aaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatgcc 39728847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 23547026 - 23546860
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||||||||||||||| ||    
T  23547026 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaa------acccatacccaaacccagtc 23546933  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||| ||||| ||||||||||  |  |||||||| | |||| | |||||||||||||||    
T  23546932 aaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatgcc 23546860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 52572566 - 52572785
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||| ||||||||||| |||||||||||||||           ||||| || ||||||||| ||||||||||||||||||||||||||||    
T  52572566 ataacataacatattaacataaagtaattttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacc 52572665  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    ||||||| |||||||  ||||||| ||||||||||||||||||| |||||| |||||||||| ||||||||  ||||||||||| ||| |||||| | ||    
T  52572666 cgtgttttgagatcgaggaaaactcatacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggcggataaccacgggt 52572765  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  52572766 atgggttttgttgccatgcc 52572785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 44639278 - 44639418
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||  | ||||||  ||||||||||||||||||| ||    
T  44639278 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaacccagtc 44639377  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||| |||||||||| |||||||| ||||| ||||||||||    
T  44639378 aaaatggggaaaaccagtcaaattgggtttcgttcggacgg 44639418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 52198159 - 52198292
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||  |||||  ||||||||||||||||||| ||    
T  52198159 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaacccagtc 52198258  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    ||||| |  |||||||||||||||||||||||||    
T  52198259 aaaacagaaaaaacccgtcaaattaggtttggtt 52198292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 48390899 - 48390729
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||  || ||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||| ||||    
T  48390899 tgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 48390800  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||| |||||||||| | ||||||||| || |||||||  | |||| | |||||||||||||||    
T  48390799 aacggggaaaatccgtcaaattggatttggttcgaacgggtaaccgcgggtatgggttttgttgccatgcc 48390729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 54317148 - 54317320
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||||  |||||| || ||||| ||||||| | || ||||| |||||||| ||    
T  54317148 tttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaacccagtc 54317247  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| | |||||||||| | |||||||| |  ||| |||||||||||||||||    
T  54317248 aaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacggatatggattttgttgccatgcc 54317320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 22535920 - 22535754
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||| || || || ||||||| ||||||||||||||||||| |||||||    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 22535821  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgc 222  Q
    ||||||||||| |||||||  ||||||||||| ||| |||||  | |||| | ||||||||||||||    
T  22535820 ggggaaaacccatcaaattgagtttggttcgggcggataaccgcgggtatgggttttgttgccatgc 22535754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 4557390 - 4557253
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||| || | ||| ||||||  | ||||||||||||||||| |    
T  4557390 atttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccatacccaaacccagt 4557291  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||| ||||||||||||||| ||||| ||||||    
T  4557290 caaaacgggaaaaacccgtcaaattgggttttgttcgg 4557253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 34119659 - 34119796
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| |||||||||||||||||||| |||| ||||| |||||||||||||  | |||||  |||||| | || ||||||||||||||||    
T  34119659 atttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaat 34119758  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  34119759 caaaatggggaaaacccgtcaaattagatttggttcgg 34119796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 4016128 - 4015956
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||||||| ||||| || ||||| ||||||  | ||||||||||||||| | ||    
T  4016128 tttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagtc 4016029  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||||||||||||||  |||| |||| ||  |||||||| | |||| | |||||||||||||||    
T  4016028 aaaacgggaaaaacccgtcaaattgagtttcgttcgggtgggtaaccacgggtatgggttttgttgccatgcc 4015956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 48305725 - 48305589
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| |||| |||||||||||||||||||||| ||| ||| |||||||||||||| || || || ||||||| ||||||||| ||||||||| ||    
T  48305725 tttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccataaccaaacccagtc 48305626  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| ||||||||||||||| ||| ||||||||||||    
T  48305625 aaaatggggaaaacccgtcagattgggtttggttcgg 48305589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 23580833 - 23580954
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| || |||||||||||||||||||||||||||  ||||| ||||||| || || || ||||||| ||||||||||||||||||| ||||    
T  23580833 tgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaa 23580932  T
Q  154 aacggggaaaacccgtcaaatt 175  Q
    |||||| |||||||||||||||    
T  23580933 aacgggaaaaacccgtcaaatt 23580954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 42758378 - 42758550
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||  |||||||||||| ||||||||||||||||| |||||| || ||||| | ||||  | || |||||||||||||| |     
T  42758378 tttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaacccagtt 42758477  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||| |||||||||| ||||||| |||| | |||||||| | |||| | |||||||||||||||    
T  42758478 aaaacggggaaaatccgtcaaattgggtttggatcgggcgggtaaccacgggtatgggttttgttgccatgcc 42758550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 44172583 - 44172733
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  44172583 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacc 44172682  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    ||||||| |||||||| ||||||  |||||||||| |||||||| ||||||    
T  44172683 cgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaa 44172733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 44179283 - 44179433
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  44179283 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacc 44179382  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    ||||||| |||||||| ||||||  |||||||||| |||||||| ||||||    
T  44179383 cgtgttttgagatcggggaaaacccatacccatactcaaacccagtcaaaa 44179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 54 - 222
Target Start/End: Original strand, 34025960 - 34026129
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| ||| |||||||  |||||||||| |||||||||||||||||| |||||| || ||||| ||||||  ||||||||| ||||||||| ||||    
T  34025960 tgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaa 34026059  T
Q  154 aacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgc 222  Q
    |||||| |||| |||||||||| | |||||||| ||| |||||||  | |||| | ||||||||||||||    
T  34026060 aacgggaaaaaaccgtcaaattggttttggttcgggagggtaaccgcgggtatgggttttgttgccatgc 34026129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 23154187 - 23153978
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           |||||||| || |||||||||||||||| |||||||||| ||||||||||||||     
T  23154187 acatatcaacataaagtaattttttacatttgggataggtatgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtgttt- 23154089  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggtt-cggacggtaaccaggagtatagattt 211  Q
    || ||||| ||||||  |||||||||||||||| || | |||||||| ||||||||||||||| || |||||| |||  |||||||  |  ||| |||||    
T  23154088 gaaatcggggaaaacccatacccatacccaaactcagttaaaacgggaaaaacccgtcaaattggggttggttccggcgggtaaccgcggatatggattt 23153989  T
Q  212 tgttgccatgc 222  Q
    |||||||||||    
T  23153988 tgttgccatgc 23153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 53631908 - 53632080
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||  | ||  | ||||||| | ||||||||| | ||||| ||    
T  53631908 tttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccattc 53632007  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacg-gtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||| |||||||||||||||||| |||||||||| ||| ||||||| | ||||   |||| ||||||||||    
T  53632008 aaaacgaggaaaacccgtcaaattaagtttggttcgaacgagtaaccacgggtatgagttttattgccatgcc 53632080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 57 - 223
Target Start/End: Original strand, 29842317 - 29842483
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||  | ||||| ||||||  ||||| ||||||||||||||||  |||    
T  29842317 gtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatcgg-gaaaacccatacctatacccaaacccaatccgaac 29842415  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
      | ||||||||||||||||| |||||||| ||||| ||||   |||||| |||||||||| ||||||    
T  29842416 atgaaaaacccgtcaaattagatttggttcagacggataactgcgagtatggattttgttgtcatgcc 29842483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 19111738 - 19111871
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||| |||||||| |||||||||| ||||||||||||| || |||| ||||||||||| || |||||  |||||| | || |||||||||||||||||    
T  19111738 tttgggcatgggtttagggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatc 19111837  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||| ||| |||| |||||||||| | |||||||    
T  19111838 aaaaagggaaaaatccgtcaaattggatttggtt 19111871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 34154420 - 34154541
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||||||||||| |  |||||||||  ||||||| ||||| || ||||| ||||||  ||||||||| ||||||||| ||||    
T  34154420 tgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaacacatacccatatccaaacccagtcaa 34154519  T
Q  154 aacggggaaaacccgtcaaatt 175  Q
    ||||||||||| ||||||||||    
T  34154520 aacggggaaaatccgtcaaatt 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 43582597 - 43582717
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||| || ||||| ||||||| |||| ||||| |||||||| | ||||||| ||||||||    
T  43582597 gggtgggtacctacatacacgttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaaccc 43582696  T
Q  168 gtcaaattaggtttggttcgg 188  Q
     ||||||| | ||||||||||    
T  43582697 atcaaattggatttggttcgg 43582717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 51 - 185
Target Start/End: Original strand, 831012 - 831139
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    |||||||||||||||  ||||||||||| |||||| ||||| ||||| ||||||||||||| || | ||| ||||     |||||||||||||||||| |    
T  831012 atttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaacgg-gaaa-----tacccatacccaaacccagt 831104  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    ||||||||||||||||||||||||| |||||||||    
T  831105 caaaacggggaaaacccgtcaaatttggtttggtt 831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 44106923 - 44106742
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||| ||||||||||| |||||||||||||||           |||||||| ||||| | |||||||||| ||||||| |||||||||||    
T  44106923 ataacataacatattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacc 44106824  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||  |||| || ||||||  |||| |||||||||||||| ||||||||||||||| ||||||||||  |||| ||||||    
T  44106823 cgtgttttaagattggggaaaac-catactcatacccaaacccagtcaaaacggggaaaa-ccgtcaaattgagttttgttcgg 44106742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 6738517 - 6738353
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           ||||| |||||||||||||||||||||||||||||||||           ||||     
T  6738517 acatatcaacataaagtaattttttacatttgggacgggtatgagtatggatttggggtgggtacctatatacccgttacccgt-----------gtttt 6738429  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    || ||||| ||||||  ||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||||||    
T  6738428 gaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgg 6738353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 17146281 - 17146098
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||||||| ||||||| |||||||||| | ||||||||| |||||||    
T  17146281 ataacataacatatcaacataaagtaattttttacatttgggaagggtttgtgtatgggttcggggtggatacctatataactgttacccgttccatacc 17146182  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    | ||||| ||||| ||| |||||  |||||||||||||||     ||||||||||| |||||||||||||| | ||||||| ||||||    
T  17146181 catgttttgagattggaaaaaacccatacccatacccaaa---tgtcaaaacgggg-aaacccgtcaaattggatttggtttggacgg 17146098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 42243391 - 42243531
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||  |||||||||| ||  ||||| | |||||||| || ||||||||||| | || |||||  |||||  | || |||||||||||||| ||    
T  42243391 tttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaaacccagtc 42243490  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||| |||||||||||||||||||| |||||||||| |||||    
T  42243491 aaaccggggaaaacccgtcaaattgggtttggttcagacgg 42243531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 10043364 - 10043234
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||| | ||||  ||||||||||||||||||||| ||||| || | | | ||||||  | ||||||||||||||||| ||||    
T  10043364 tgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaacccatacccaaacccagtcaa 10043265  T
Q  154 aacggggaaaacccgtcaaattaggtttggt 184  Q
    |  || |||||||||||||||| || |||||    
T  10043264 agtggagaaaacccgtcaaattggggttggt 10043234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 220
Target Start/End: Original strand, 49025685 - 49025841
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||  || ||||||||||||| |||||||||||||||||||||||| |||||||| ||||            ||||||||||| ||    
T  49025685 tttgggtatgggttcgga-tgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaa------------acccaaacccagtc 49025771  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccat 220  Q
    ||||| || ||||||| ||||||| |||||||||| ||  |||||||| | |||| ||||||||||||||    
T  49025772 aaaacaggaaaaacccatcaaattgggtttggttcaggcgggtaaccacgggtatggattttgttgccat 49025841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 187
Target Start/End: Complemental strand, 10371323 - 10371222
Alignment:
Q  92 cccgtcccatacccgtgtttcgagatcggagaaaa------cttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||| ||||||||||||||| ||||| || |||||      || ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10371323 cccgccccatacccgtgttttgagattggggaaaatccatactcatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggtt 10371224  T
Q  186 cg 187  Q
    ||    
T  10371223 cg 10371222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 30904900 - 30904762
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||| || ||| || ||||   | || |||||||||| ||| |    
T  30904900 atttgggtatgggttcggggtgggtacctatatccccg-tacccgtcccgtacccgtgttttgaaatcagaaaaaagccaaactcatacccaaa-ccagt 30904803  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
     ||| ||||| |||||||||||||| | ||| ||||||||||    
T  30904802 aaaagcgggg-aaacccgtcaaattggatttagttcggacgg 30904762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 56 - 188
Target Start/End: Complemental strand, 3385936 - 3385804
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    ||||||| || | ||||| ||||||||| | ||||||| ||||| ||||||||||| || || ||  |||| | | | ||||||| ||||||| |||||     
T  3385936 ggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaacccagtcaaag 3385837  T
Q  156 cggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||| |||| ||||||||||||    
T  3385836 cggggaaaacccgtcgaattgggtttggttcgg 3385804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 194
Target Start/End: Original strand, 27252588 - 27252710
Alignment:
Q  71 tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtc 170  Q
    |||||||||||||  | |||| ||||||| ||||| ||||| || || |||||||||| | || |||||||||||||||||||| | |  ||||||||||    
T  27252588 tgggtacctatatcactgttatccgtcccgtacccatgttt-gaaattggagaaaactcaaactcatacccaaacccaatcaaatccgataaaacccgtc 27252686  T
Q  171 aaattaggtttggttcggacggta 194  Q
    ||||||| ||| |||||| |||||    
T  27252687 aaattagatttagttcgggcggta 27252710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 29858574 - 29858487
Alignment:
Q  137 tacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||| ||||||||||||||| |||| ||||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  29858574 tacccaaacccagtcaaaacggggaaaatccgttaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 29858487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 10823824 - 10823696
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----tatgggtttggggt---gggtacctatatacccgttacccgtcccatacccgt 107  Q
    |||||| ||||||||||||||||||| |||||||||||||||     | ||||| |||| |   |||||| ||||||||||||| |  || |||||||||    
T  10823824 ataacataacatatcaacataaagtaattttttacatttgggagaggtttgggtatgggttcgggggtacttatatacccgttatcaatctcatacccgt 10823725  T
Q  108 gtttcgagatcggagaaaacttataccca 136  Q
    |||| |||||||||||||||  |||||||    
T  10823724 gttttgagatcggagaaaacccataccca 10823696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 20087050 - 20087135
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    ||||||||||| || ||||| ||||||  ||||||||| ||||||||| ||||||||| ||||| |||||||||| | ||||||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattggatttggttc 20087135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 31126834 - 31126746
Alignment:
Q  133 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccat 220  Q
    |||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||  || |||||| | |||| | ||||||||||||    
T  31126834 cccatacccaaaccaaatcaaaacggggaaaacccatcaatttaagtttggttcgggtggttaaccacgtgtatgggttttgttgccat 31126746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 3414588 - 3414485
Alignment:
Q  85 cccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggt 184  Q
    ||||||||| ||||| ||| |||||||  | |||||  |||||| | ||||||| ||||||||||||||| |||||||||||  || |||| ||||||||    
T  3414588 cccgttacctgtcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacctatcgaattgggtttggt 3414489  T
Q  185 tcgg 188  Q
    ||||    
T  3414488 tcgg 3414485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 30616363 - 30616244
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||| ||  ||||  | |||||||||||||||| |||||||| || ||||| ||||||  | |||||||| ||||  || ||||    
T  30616363 tgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaacccatactcaaattcagtcaa 30616264  T
Q  154 aacggggaaaacccgtcaaa 173  Q
    |||||| ||||||| |||||    
T  30616263 aacgggaaaaacccctcaaa 30616244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 31126879 - 31126826
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccataccc 105  Q
    |||||||||| ||| ||||||| |||||||||||  ||||||||||||||||||    
T  31126879 tttgggtatgagttcggggtggatacctatatacatgttacccgtcccataccc 31126826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 38347658 - 38347710
Alignment:
Q  140 ccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||||    
T  38347658 ccaaagccaattaaaacggagaaaatccgtcaaattagggttggttcggacgg 38347710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 40890414 - 40890478
Alignment:
Q  122 gaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    ||||||| |||| |||| ||||||| | |||||||| | |||||||||| |||||||||||||||    
T  40890414 gaaaactcatactcatatccaaacctagtcaaaacgagaaaaacccgtccaattaggtttggttc 40890478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 41937071 - 41936966
Alignment:
Q  78 ctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattag 177  Q
    |||||||||||||| ||||| ||||| |||||||  | ||||| ||||||      |||||| ||||||||||||||||| |||||| || ||||||| |    
T  41937071 ctatatacccgttatccgtctcatactcgtgttttaaaatcggggaaaac------ccatactcaaacccaatcaaaacgaggaaaatccatcaaatttg 41936978  T
Q  178 gtttggttcgga 189  Q
     |||| ||||||    
T  41936977 atttgattcgga 41936966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 49025638 - 49025679
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||| |||||| |||||||||||||||    
T  49025638 ataacataacatatcaacacaaagtaattttttacatttggg 49025679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 3e-67; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 27534641 - 27534860
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||           ||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27534641 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacc 27534740  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| | ||    
T  27534741 cgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggacggttaaccacgggt 27534840  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  27534841 atgggttttgttgccatgcc 27534860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 3484054 - 3483835
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||| ||||||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||||| |||||||||    
T  3484054 ataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacc 3483955  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||| ||||    
T  3483954 cgtgtttcgagatcggggaaaacccatacacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccatgagt 3483855  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  3483854 atgggttttgttgccatgcc 3483835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 32853801 - 32854018
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32853801 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 32853900  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    ||||||| |||||||| ||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||| ||| |||||| | ||    
T  32853901 cgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcggtcggataaccacgggt 32854000  T
Q  204 atagattttgttgccatg 221  Q
    || | |||||||||||||    
T  32854001 atgggttttgttgccatg 32854018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 52 - 220
Target Start/End: Complemental strand, 5863467 - 5863298
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||| ||    
T  5863467 tttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtc 5863368  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccat 220  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| | |||| | ||||||||||||    
T  5863367 aaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgccat 5863298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 2367330 - 2367502
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||| | ||    
T  2367330 tttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacctagtc 2367429  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| ||||||| ||||||| |||||||||||||| |||||||| |  ||| | |||||||||||||||    
T  2367430 aaaacgggaaaaacccatcaaattgggtttggttcggacgggtaaccacggatatgggttttgttgccatgcc 2367502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 10188157 - 10187992
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||       ||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||    
T  10188157 tttgggtatgggttcggggtgggtacctatatacccgt-------cccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 10188065  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  10188064 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 10187992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 10142602 - 10142430
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||  ||||||||||||||||||| ||    
T  10142602 tttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccatacccatacccaaacccagtc 10142503  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    |||||| |||||||||| ||||||  ||||||||||  ||| ||||||  ||||| | |||||||||||||||    
T  10142502 aaaacgaggaaaacccgccaaattgagtttggttcgagcggataaccacaagtatgggttttgttgccatgcc 10142430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 12141389 - 12141561
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| || ||||||  |||||| |||||||||||| ||    
T  12141389 tttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccatacccgtacccaaacccagtc 12141488  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||||||||||   |||||||||| | ||||||||   |||| | |||||||||||||||    
T  12141489 aaaacggggaaaacccgtcaaattgaatttggttcgggcgggtaaccataggtatgggttttgttgccatgcc 12141561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 31496464 - 31496610
Alignment:
Q  78 ctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattag 177  Q
    ||||||||||||  |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||      
T  31496464 ctatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattga 31496563  T
Q  178 gtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||| |||||||| | |||| | |||||||||||||||    
T  31496564 gtttggtttggacgggtaaccacgggtatgggttttgttgccatgcc 31496610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 78 - 223
Target Start/End: Original strand, 31501850 - 31501996
Alignment:
Q  78 ctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattag 177  Q
    ||||||||||||  |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||      
T  31501850 ctatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattga 31501949  T
Q  178 gtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||| |||||||| | |||| | |||||||||||||||    
T  31501950 gtttggtttggacgggtaaccacgggtatgggttttgttgccatgcc 31501996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 223
Target Start/End: Original strand, 30986284 - 30986429
Alignment:
Q  79 tatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattagg 178  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||||||| || ||||||||||||||||||||||||||  |    
T  30986284 tatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgag 30986383  T
Q  179 tttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||| | |||||||| | |||| | |||||||||||||||    
T  30986384 tttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 30986429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 184
Target Start/End: Original strand, 32053092 - 32053218
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||| || ||||| ||||      ||||||||||||||||| ||    
T  32053092 tttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaa------acccatacccaaacccagtc 32053185  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggt 184  Q
    |||||||||||||||||||||||| ||||||||    
T  32053186 aaaacggggaaaacccgtcaaattgggtttggt 32053218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 15498328 - 15498500
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||| |||||| ||| ||||||||||||||||| ||||| ||| ||||||||||||| || ||||| ||||||  ||| ||||||||||||||| ||    
T  15498328 tttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccatatccatacccaaacccattc 15498427  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||||||| |||||||||| ||||| |||||| ||||| ||| |||||  |||||| ||||||||||| |||||    
T  15498428 aaaacggagaaaacccgttaaattgggtttgattcgggcggataaccgtgagtatggattttgttgcaatgcc 15498500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 24225702 - 24225848
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaa------acttatacccatacccaaac 145  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||      ||  ||||||| ||||||||    
T  24225702 tttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccatacccatacccaaacccaaac 24225801  T
Q  146 ccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||||||||||||||||||| ||||||||   ||||||||||||||    
T  24225802 ccaatcaaaacggggaaaacctgtcaaattgaatttggttcggacgg 24225848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 27738729 - 27738912
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| ||||||||||| |||||| | |||||||||||||||||    
T  27738729 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacc 27738828  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||| || ||||| ||||||  ||||||||||| ||||||| |||||||||| ||||||| |||||||   ||||||||||    
T  27738829 cgtgttttgaaatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccatcaaattgaatttggttcgg 27738912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 32532505 - 32532667
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           |||||||| ||||||||||||||||||||| |||||||||||||||||||||||     
T  32532505 acatatcaacataaagtaattttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgtttt 32532604  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
    || ||||| ||||||  |||| ||||| |||||||||| |||||||  |||||||||||||||    
T  32532605 gaaatcggggaaaacccatactcatactcaaacccaatgaaaacggaaaaaacccgtcaaatt 32532667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 188
Target Start/End: Original strand, 9442441 - 9442569
Alignment:
Q  59 atgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacgg 158  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||| || |||||  ||| |  ||||||||||||||| ||| |||||||||    
T  9442441 atgggttcggagtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaa-ccagtcaaaacgg 9442539  T
Q  159 ggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||||||||  |||||||||||    
T  9442540 ggaaaacccgtcaaattgagtttggttcgg 9442569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 30816264 - 30816399
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||| |||||||| ||||||||| ||||||||||| |||||| ||||||||||||||||  | |  || ||||||| | ||||||| ||||||||||||    
T  30816264 tttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt--aaaatggggaaaactcaaacccatatccaaacccaatc 30816361  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||||||||||||| || ||||||| |||||||||||||    
T  30816362 aaaacggggaaaatccatcaaattgggtttggttcgga 30816399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 14254961 - 14255125
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    |||||||||||||||   |||||||||||||||  ||||||| |||||||||||||||||| || ||| ||||||||| | ||||||||||||||||| |    
T  14254961 atttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtgttt-gaaatcagagaaaactcaaacccatacccaaacccagt 14255059  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagtatagattttgtt 215  Q
    ||||||| |||||| | |||||| | |||||| |||| |  |||||||| |||||| |||||||||    
T  14255060 caaaacgaggaaaatctgtcaaaatgggtttgattcgagtgggtaaccacgagtatggattttgtt 14255125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 12678178 - 12678044
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||| | || ||||| ||||||  | || |||||||||||||| ||    
T  12678178 tttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatacccaaacccagtc 12678079  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    ||||||| ||||||| ||| |  ||||||||||||    
T  12678078 aaaacggcgaaaacctgtcgagataggtttggttc 12678044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 184
Target Start/End: Complemental strand, 28079781 - 28079648
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||| || ||||| ||||||  | |||||||||||||| ||      
T  28079781 atttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagc 28079682  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggt 184  Q
    |||| |||| || |||||||||| | ||||||||    
T  28079681 caaagcgggaaatacccgtcaaaatgggtttggt 28079648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 256576 - 256440
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| | ||||| ||||| || ||||| ||||||| | || ||||||||||| ||| |    
T  256576 tttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaaacacaacc 256477  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||| ||||||||| || | |||||  |||||||||||    
T  256476 aaagcggggaaaatccattaaattgagtttggttcgg 256440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 11762449 - 11762572
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| |||||||  |||||||||||||||||||||||||||||| ||||| || |||||  ||||| || | ||||| ||||||||| |     
T  11762449 tttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatccatatccaaacccagta 11762548  T
Q  152 aaaacggggaaaacccgtcaaatt 175  Q
    |||| |||||||||||||||||||    
T  11762549 aaaatggggaaaacccgtcaaatt 11762572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 14410939 - 14410863
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaact 128  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||    
T  14410939 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaact 14410863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 12309576 - 12309718
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaa-- 149  Q
    ||||||||| |||| ||||||||||| |||||||| ||||||||| |||||||||||||| || ||| | ||| ||  ||||||||||||||||||||      
T  12309576 tttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaatacccatacccatacccaaacccaaac 12309675  T
Q  150 ----tcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
        |||||| ||||||||| ||||||||| ||| ||||||||    
T  12309676 ccagtcaaaatggggaaaactcgtcaaattgggtctggttcgg 12309718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 13769076 - 13769209
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||| ||||||||  ||||||||||||||||  |||||||||||||||||||| ||||| ||  |||| ||||||  | ||||||||| ||||||| ||    
T  13769076 tttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcggggaaaaccgaaacccatacctaaacccagtc 13769175  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    ||| || | ||||||||| ||||| |||||||||    
T  13769176 aaagcgagtaaaacccgtgaaattgggtttggtt 13769209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 20349067 - 20349142
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaa 126  Q
    ||||||||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||| || ||||| |||||    
T  20349067 atttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaa 20349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 9458666 - 9458789
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||| ||| | ||||||||| ||||| ||||||| | ||||| ||||||| ||| || || || |||| || | || |||||||||||||| |    
T  9458666 atttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaaacccagt 9458765  T
Q  151 caaaacggggaaaacccgtcaaat 174  Q
    |||| ||||||||| |||||||||    
T  9458766 caaatcggggaaaatccgtcaaat 9458789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 175
Target Start/End: Original strand, 29341260 - 29341383
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||||||| |||||||||||||  |||||||||||| ||| ||| |||||  | |||||  |||||  | || |||| ||||||||||||    
T  29341260 tttgggtatgagtttgggatgggtacctatatctccgttacccgtctcatgcccatgtttgaaaatcgggaaaaacccaaactcatatccaaacccaatc 29341359  T
Q  152 aaaacggggaaaacccgtcaaatt 175  Q
    ||||||| |||||| | |||||||    
T  29341360 aaaacggagaaaactcatcaaatt 29341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 20611064 - 20610944
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||| | || ||||||| ||| ||||| ||||||||||||||| ||||||| ||| || ||||| |||| |  | ||||||||| ||||||| | ||    
T  20611064 tgggtatagtttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccatacctaaacccagttaa 20610965  T
Q  154 aacggggaaaacccgtcaaat 174  Q
    | |||| ||||||||||||||    
T  20610964 atcgggaaaaacccgtcaaat 20610944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 189
Target Start/End: Original strand, 14506095 - 14506215
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| |||||||||||||| ||||  ||||||||||||||||| |||||| || ||||| ||||            ||||||||||| ||||||     
T  14506095 gtatgggttcggggtgggtacctaaatacttgttacccgtcccatacctgtgttttgaaatcggggaaa------------acccaaacccagtcaaaat 14506182  T
Q  157 ggggaaaacccgtcaaattaggtttggttcgga 189  Q
    |||||||||||||||||||  |||| |||||||    
T  14506183 ggggaaaacccgtcaaattgagtttcgttcgga 14506215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 24602940 - 24602881
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||| ||||||| |||||    
T  24602940 tttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttt 24602881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 32959868 - 32959988
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| ||||||| ||||||||| |||||||||||| || ||||||||||| || ||  | ||||||            ||||||||||||||||    
T  32959868 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaac------------ccaaacccaatcaaaa 32959955  T
Q  156 cggggaaaacccgtcaaattaggtttggttcgg 188  Q
    || |||||| ||||||||||||||||| |||||    
T  32959956 cgaggaaaatccgtcaaattaggtttgattcgg 32959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 18908897 - 18909019
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||||||||||||||| ||||| |  ||||||||||||||| |||| ||| || ||||| ||||||  | || ||||| ||||| || ||    
T  18908897 tttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactcatactcaaactcagtc 18908996  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    | | |||| |||| |||||||||    
T  18908997 acatcgggaaaaatccgtcaaat 18909019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 9458862 - 9458970
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||  ||| ||||||||||| ||||| |||||||||| |||| ||||||| ||   | ||||| ||||||  | ||||||||||||||||| ||    
T  9458862 tttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaacccagacccatacccaaacccagtc 9458961  T
Q  152 aaaacgggg 160  Q
    ||| |||||    
T  9458962 aaatcgggg 9458970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 34178402 - 34178285
Alignment:
Q  63 gtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaa 162  Q
    ||||||||||||||||||||| |  |||||||||| | ||||||||||| || ||| | | ||||      ||||||||||||||  |||||||||||||    
T  34178402 gtttggggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaac------ccatacccaaaccctgtcaaaacggggaa 34178309  T
Q  163 aacccgtcaaattaggtttggttc 186  Q
     |||| ||||||| ||| ||||||    
T  34178308 cacccatcaaattgggtatggttc 34178285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 14034521 - 14034557
Alignment:
Q  67 ggggtgggtacctatatacccgttacccgtcccatac 103  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14034521 ggggtgggtacctatatacccgttacccgtctcatac 14034557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 7393895 - 7393844
Alignment:
Q  140 ccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacg 191  Q
    |||||||||||||||| |||||||| |||||||||| | |||| ||||||||    
T  7393895 ccaaacccaatcaaaatggggaaaatccgtcaaattggatttgattcggacg 7393844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 19367013 - 19367072
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||| |||||| | |||||| |  |||||||||| |||||||||||||    
T  19367013 tttgggtatgggtttgaggtgggcaactatattcatgttacccgtctcatacccgtgttt 19367072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 7393971 - 7393897
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaa 126  Q
    |||| ||||||||| ||||||| ||||||||||||| ||| ||||| | ||| ||||||| || ||||| |||||    
T  7393971 tttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaa 7393897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 24602866 - 24602780
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||| ||||||| ||||||| ||||||||||  |||| |||| ||  |||||||| | |||| |||||||||| ||||||    
T  24602866 acccaaacccagtcaaaacagggaaaaaccgtcaaattgagtttcgttcgggtgggtaaccacgtgtatggattttgttgtcatgcc 24602780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 29199969 - 29199895
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaa 126  Q
    |||||||||||||| ||||| | ||| ||||| || |||||||||||| ||||||| ||| || ||||| |||||    
T  29199969 tttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 5863514 - 5863473
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  5863514 ataacataacatatcaacataaaatatttttttacatttggg 5863473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 10142649 - 10142608
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  10142649 ataacataacatatcaacataaaataattttttacatttggg 10142608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 7e-65; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 5908820 - 5908601
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  5908820 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacc 5908721  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||||| | ||    
T  5908720 cgtgtttcgagatcggggaaaactcatacccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgggcggataaccacgggt 5908621  T
Q  204 atagattttgttgccatgcc 223  Q
    || |||||||||||||||||    
T  5908620 atggattttgttgccatgcc 5908601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 20973609 - 20973410
Alignment:
Q  24 acatatcaacataaagtagttttttacatttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggaga 123  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||  | ||||| ||    
T  20973609 acatatcaacataaagtaattttttacatttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcgggga 20973510  T
Q  124 aaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgc 222  Q
    ||||  ||||||||| ||||||||| |||||||||||||||||||||| | | |||||||||||| | |||||||  | |||| | ||||||||||||||    
T  20973509 aaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcagaatgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgc 20973410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 4920783 - 4921002
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4920783 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacc 4920882  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||  ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||| | |||||||| | ||    
T  4920883 cgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 4920982  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  4920983 atgggttttgttgccatgcc 4921002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 4583125 - 4583259
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||| ||||||  ||||||||| ||||||||||||||    
T  4583125 tgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaa 4583224  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||||||||||||| ||||||||||||    
T  4583225 aacggggaaaacccgtcaaattgggtttggttcgg 4583259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 223
Target Start/End: Complemental strand, 33728075 - 33727914
Alignment:
Q  63 gtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||   ||||||||| |||||||||||||||||||||||    
T  33728075 gtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaa 33727976  T
Q  163 aacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    || |||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  33727975 aatccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 33727914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 12866634 - 12866496
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| | |||||||||||||||||| |||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||| ||||    
T  12866634 tgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcatacccatacccaaacccagtcaa 12866535  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    || ||||||||||||||||||| | ||||||||||||||    
T  12866534 aatggggaaaacccgtcaaattggatttggttcggacgg 12866496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 29246034 - 29245900
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||| || ||||||||||||| ||||||||||||||||| | ||||    
T  29246034 tgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcatacccatacccaaacctagtcaa 29245935  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||||||||  |||||||||||    
T  29245934 aacggggaaaacccgtcaaattgagtttggttcgg 29245900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 17853375 - 17853244
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| || ||||||| ||||||| |||||||||||||||||||||||||| || ||||| ||||||  ||| ||||||||||||||||||||    
T  17853375 tgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtgttt-gaaatcggggaaaacccatatccatacccaaacccaatcaa 17853277  T
Q  154 aacggggaaaacccgtcaaattaggtttggttc 186  Q
    |||||||||||||||||||||||||||||||||    
T  17853276 aacggggaaaacccgtcaaattaggtttggttc 17853244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 10127085 - 10127250
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||       |||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||    
T  10127085 tttgggtatgggttcggggtgggtacctatatacc-------cgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 10127177  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| | |||||||||| ||| |||||| | |||| |||||||||| ||||||    
T  10127178 aaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatggattttgttgtcatgcc 10127250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 15890172 - 15890382
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tatgggtttggg-----gtgggtacctatatacccgttacccgtcccatacccgtgtttcg 113  Q
    |||||||||||||||||| |||||||||||||||     ||||||| ||||     |||||||||||||||||||||||||||||||||||||||||| |    
T  15890172 acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgggtgggtacctatatacccgttacccgtcccatacccgtgttttg 15890271  T
Q  114 agatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagatttt 212  Q
    | ||||||||||||  |||| |||| ||||||| | |||||||||| ||||||||||||||| | |||||||||| | |||||||  |||||| | ||||    
T  15890272 aaatcggagaaaacccatacacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggttcgggcgggtaaccgcgagtatgggtttt 15890371  T
Q  213 gttgccatgcc 223  Q
    |||| ||||||    
T  15890372 gttgtcatgcc 15890382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 12834657 - 12834519
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||| || ||||| || || |||||||||  ||||||||||||||||||| ||||    
T  12834657 tgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccatacccatacccaaacccagtcaa 12834558  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    || |||||||||||||||||||  |||||||||||||||    
T  12834557 aatggggaaaacccgtcaaattgagtttggttcggacgg 12834519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 40517810 - 40517982
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| | |||||| ||||||  ||||||||||||||||||| ||    
T  40517810 tttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaacccagtc 40517909  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||| ||||||||||   |||||||| ||  |||||||| | |||| | |||||||||||||||    
T  40517910 aaaacgggaaaaatccgtcaaattgaatttggttcaggcgggtaaccacgggtatgggttttgttgccatgcc 40517982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 42987564 - 42987393
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||||||||| |||||||| |||||   |||||| ||||||||| || ||    
T  42987564 tttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgagatcggggaaaatccatacccgtacccaaactcagtc 42987465  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||||||| ||||||   ||||||||||||||  |||| || ||| | |||||||||||||||    
T  42987464 aaaacgggaaaaacccgccaaattgaatttggttcggacggataccacgaatatgggttttgttgccatgcc 42987393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 30996600 - 30996739
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||| || ||| ||||||||||||||||||||||||||| ||||||||| |||||||  | ||||||||||||  |||| |||||||||||||| ||    
T  30996600 tttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaaacccatactcatacccaaacccagtc 30996699  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  30996700 aaaac-gggaaaatccgtcaaattgggtttggttcggacgg 30996739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 22694986 - 22694817
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||| |||||||||||  |||||||||||||| ||| |||||||| | ||||  ||||||||||||||||||| |     
T  22694986 tttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcgg-ggaaacccatacccatacccaaacccagtt 22694888  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatg 221  Q
    |||||||| |||  |||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||    
T  22694887 aaaacgggaaaattccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 22694817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 13402127 - 13401917
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tat-----gggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcg 113  Q
    |||||||||||||||||| |||||||||||||||     |||     ||||| || ||||||||||| ||||||||||||||| ||||||||||||||      
T  13402127 acatatcaacataaagtaattttttacatttgggacgggtatcggttgggttcggagtgggtacctaaatacccgttacccgttccatacccgtgtttga 13402028  T
Q  114 agatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagatttt 212  Q
    | |||||  |||||| ||||||||||||||||| | |||||||||  |||| |||||||||| |||||||||||| | |||||||  | |||| | ||||    
T  13402027 aaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggtttt 13401928  T
Q  213 gttgccatgcc 223  Q
    |||||||||||    
T  13401927 gttgccatgcc 13401917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 6369705 - 6369834
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||| ||||||| |||||||| |||||||| ||| ||| || ||| | ||||||| |||||||| ||||||| ||||||||||    
T  6369705 gtatgggttcggggtgggtacatatatacacgttaccc-tcccatactcgtattttgaaatcagggaaaactcatacccatgcccaaactcaatcaaaac 6369803  T
Q  157 ggggaaaacccgtcaaattaggtttggttcg 187  Q
    | | |||| ||||||||||||||||||||||    
T  6369804 gagaaaaaaccgtcaaattaggtttggttcg 6369834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 58 - 186
Target Start/End: Complemental strand, 16311372 - 16311244
Alignment:
Q  58 tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacg 157  Q
    |||||||| ||||||||||||||||| || |||| ||||| | ||| ||||||| || |||||| |||||| | || |||| ||||||||||||||| ||    
T  16311372 tatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcg 16311273  T
Q  158 gggaaaacccgtcaaattaggtttggttc 186  Q
    || |||| |||||||||||||||||||||    
T  16311272 ggaaaaaaccgtcaaattaggtttggttc 16311244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 6092650 - 6092478
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatt-----------tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||           |||||||||||| |||||||||||||||||||||||           ||||    
T  6092650 ataacataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgt-----------tacc 6092562  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||| ||||||||  |||||  |||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||    
T  6092561 cgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggttcgg 6092478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 28569106 - 28568984
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||  ||| || ||||| |||||   | || |||||||||||||| ||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| | |||||||||||||||||    
T  28569006 aaatcagggaaaacccgtcaaat 28568984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 6156003 - 6155873
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||||||  ||||| |||| |||||||||||| || ||||| ||||||  | || |||||||||||||| ||    
T  6156003 tttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacatacccaaacccagtc 6155906  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggt 184  Q
    ||||||  |||||||||| ||||| | ||||||    
T  6155905 aaaacgaagaaaacccgttaaatttgatttggt 6155873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 38972926 - 38973047
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||||||| ||||||||||||||||| |||||||||  |||||||||| ||||| || |||||  |||||  | || |||||| ||||||| ||    
T  38972926 tttgagtatgggttcggggtgggtacctatattcccgttacctatcccatacccatgttttgaaatcgggaaaaacccaaactcatacctaaacccagtc 38973025  T
Q  152 aaaacggggaaaacccgtcaaa 173  Q
    ||||||||||||||| ||||||    
T  38973026 aaaacggggaaaacctgtcaaa 38973047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 3564770 - 3564655
Alignment:
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacggtaaccaggagta 204  Q
    ||||||| || |||||||||||   ||||||||||||||||||| |||||||||| ||||||||||||||| | |||||||||| ||| ||||  |||||    
T  3564770 cgtgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaacggg-aaaacccgtcaaattggatttggttcgggcgggaaccgcgagta 3564672  T
Q  205 tagattttgttgccatg 221  Q
    | |||||||||| ||||    
T  3564671 tggattttgttgtcatg 3564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 35194074 - 35194015
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35194074 tttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 35194015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 174
Target Start/End: Complemental strand, 23045072 - 23044954
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| ||||||||||| |||||  ||||||||| |||| ||||||| ||| || ||||| |||||| || |||||||||||||| || |||||     
T  23045072 ggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaaacccatacccaaactcagtcaaat 23044973  T
Q  156 cggggaaaacccgtcaaat 174  Q
     ||| ||||||||||||||    
T  23044972 tgggaaaaacccgtcaaat 23044954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 18207038 - 18207155
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    ||||||||||||||||||| |||||| ||||||||| || |||| || ||||  ||||||  | || ||| |||||||||| |||||||||| ||||| |    
T  18207038 gggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcgaggaaaacccaaactcatgcccaaacccagtcaaaacgggaaaaacac 18207137  T
Q  168 gtcaaattaggtttggtt 185  Q
    |||||||| |||||||||    
T  18207138 gtcaaattgggtttggtt 18207155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 35311831 - 35311953
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| || ||||||||||||||| | |||||||||||||||||||||||| || |||||         ||| |||||||||||| || |||||||    
T  35311831 gtatgggttcggagtgggtacctatatatctgttacccgtcccatacccgtgttttgaaatcgg---------atatccatacccaaactcagtcaaaac 35311921  T
Q  157 ggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||  |||| |||||||||| ||||||||||||    
T  35311922 ggaaaaaatccgtcaaattgggtttggttcgg 35311953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 42717637 - 42717575
Alignment:
Q  130 atacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||    
T  42717637 atacccatacccaaatccagtcaaaacgggaaaaacccgtcaaattgggtttggttcggacgg 42717575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 28045621 - 28045782
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tatgggtttggg-----gtgggtacctatatacccgttacccgtcccatacccgtgtttcg 113  Q
    |||||||||||||||||| |||||||||||||||     ||||||| ||||     |||||||||||||||||||||||||||||||||  ||||||| |    
T  28045621 acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgggtgggtacctatatacccgttacccgtcccatattcgtgttttg 28045720  T
Q  114 agatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
    |  | ||  |||||  ||||||||||| |||| || |||||| ||| ||||  |||||||||    
T  28045721 aattagggaaaaacccatacccatacctaaacacagtcaaaatgggaaaaatacgtcaaatt 28045782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 10822608 - 10822536
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    ||||||||||| ||||||||||| ||||  |||||||||||||| |||||||||||| || ||||||||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaac 10822536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 2412811 - 2412688
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| ||||  || ||||||| |||||||||||||    |||||||||||||||| || || ||  |||| | | |||||||||||||| |||||    
T  2412811 tttgggtattggttcaggatgggtacatatatacccgttatttatcccatacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatc 2412712  T
Q  152 aaaacggggaaaacccgtcaaatt 175  Q
    |||| |||||||| ||||||||||    
T  2412711 aaaatggggaaaatccgtcaaatt 2412688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 2985150 - 2985227
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaact 128  Q
    |||||||||||| || ||| || ||||||||||||||||||||||||||| |||| ||| | || |||||||||||||    
T  2985150 atttgggtatggtttcgggatgagtacctatatacccgttacccgtcccaaacccatgtcttgaaatcggagaaaact 2985227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 2681220 - 2681360
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||| |||  |||| ||| |||||| |||| |||| || ||| || ||||| ||||||  | || ||| ||||||| || ||    
T  2681220 tttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactcagtc 2681319  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||| ||||||||||||||||||||  | |||||| ||||||    
T  2681320 aaatcggggaaaacccgtcaaattgaggttggtttggacgg 2681360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 38006555 - 38006499
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgt 107  Q
    ||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||||    
T  38006555 atttgggtatgggttcggggtgggtacctatatatctgttacgcgtcccatacccgt 38006499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 1218761 - 1218812
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccataccc 105  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  1218761 tgggtatgggttcggagtgggtacctatatacccgttacctgtcccataccc 1218812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 12447385 - 12447444
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    ||||||||| |||| ||||||||||||||||||||| ||||| |||||||||| ||||||    
T  12447385 tttgggtataggttcggggtgggtacctatatacccattacctgtcccatacctgtgttt 12447444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 27900487 - 27900388
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| | | ||||||||||||| | | ||||||||||||||||| ||||| || |||||  |||||| | ||| ||| |||||||||||    
T  27900487 atttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcgggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 40187741 - 40187602
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||||||| ||  |||||||||  |||||||||||| |  |||||||||| || || || ||||||  | || |||  ||||||||| ||    
T  40187741 tttgggtatgagtttggg-tgaatacctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagtc 40187643  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||| || ||||||||||||||| |  |||||||||||||||    
T  40187642 aaagcgaggaaaacccgtcaaaatgagtttggttcggacgg 40187602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 12712642 - 12712567
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||||||| | ||||||||| |||||  |||||| ||||||| ||||||| ||| || ||||||||||||    
T  12712642 tttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 33420349 - 33420295
Alignment:
Q  135 catacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||||| ||||||||||||||| ||| || |||||||||| |||||||||||||||    
T  33420349 catactcaaacccaatcaaaatgggaaatacccgtcaaaataggtttggttcgga 33420295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 12457596 - 12457641
Alignment:
Q  139 cccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggt 184  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||    
T  12457596 cccaaacccaatcaaagcggggaaaccccgtcaaattgggtttggt 12457641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 39422394 - 39422491
Alignment:
Q  96 tcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacggt 193  Q
    |||||||||||||||| || ||||   |||||  | || |||| ||||||||||||||| ||||||||||| ||||| || ||| |||||||| ||||    
T  39422394 tcccatacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggt 39422491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 8453446 - 8453390
Alignment:
Q  64 tttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    ||||||||| ||||||||||| | ||||||| |||||||||||||||| || |||||    
T  8453446 tttggggtgtgtacctatatatctgttacccatcccatacccgtgttttgaaatcgg 8453390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 12773906 - 12773831
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||| ||||||||| | ||||||||| |||||  |||||| ||||||| ||||||| ||| || ||||||||||||    
T  12773906 tttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12773831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 18451910 - 18451863
Alignment:
Q  150 tcaaaacggggaaaacccgtcaaattaggtttggttcggacggtaacc 197  Q
    ||||| |||||||||||||||||| | |||||||||||||||| ||||    
T  18451910 tcaaatcggggaaaacccgtcaaactgggtttggttcggacgggaacc 18451863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 6810162 - 6810220
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 110  Q
    |||||||||||||| |||||| |||| ||||| | |||||||||| || ||||||||||    
T  6810162 tttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgtt 6810220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 12447459 - 12447544
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||| |||||| ||||||| || |||||||| |||||||||| ||  |||||||| | |||| | |||||||||||||||    
T  12447459 acccaaacccagtcaaaatggggaaatcc-gtcaaattgggtttggttcgggtgggtaaccacgggtatgggttttgttgccatgcc 12447544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 1218807 - 1218864
Alignment:
Q  130 atacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg 187  Q
    ||||||||||||||||||| |||||| ||  ||||| ||||||||| | |||||||||    
T  1218807 atacccatacccaaacccagtcaaaatggaaaaaactcgtcaaattggatttggttcg 1218864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 12866675 - 12866642
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  12866675 acatatcaacataaagtaattttttacatttggg 12866642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 17853416 - 17853383
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  17853416 acatatcaacataaagtaattttttacatttggg 17853383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 42987611 - 42987570
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  42987611 ataacataacatatcaacataaaataattttttacatttggg 42987570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 3564852 - 3564820
Alignment:
Q  24 acatatcaacataaagtagttttttacatttgg 56  Q
    |||||||||||||||||| ||||||||||||||    
T  3564852 acatatcaacataaagtaattttttacatttgg 3564820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 164
Target Start/End: Original strand, 24207736 - 24207800
Alignment:
Q  100 atacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaa 164  Q
    ||||| |||||| || ||||| ||||||| | |||||||||||||| |||||||| |||| ||||    
T  24207736 atacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaagcgggaaaaa 24207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 29664975 - 29665047
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaa 124  Q
    |||||||||| ||| |  |||||||||||||| |||||||||| ||   ||||||||||| || |||||||||    
T  29664975 tttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatcggagaa 29665047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 7e-62; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 30846951 - 30847123
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| ||    
T  30846951 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtc 30847050  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  30847051 aaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 30847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 24414263 - 24414046
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||| |||||||||||||||||    
T  24414263 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacc 24414164  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||   ||    
T  24414163 cgtgttttgagatcggggaaaaccgatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacaggt 24414064  T
Q  204 atagattttgttgccatg 221  Q
    || | |||||||||||||    
T  24414063 atgggttttgttgccatg 24414046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 36128190 - 36128018
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||| |  ||||||||||||||||||| ||    
T  36128190 tttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacatacccatacccaaacccagtc 36128091  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacg-gtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| | |||| | |||||||||||||||    
T  36128090 aaaacggggaaaatccgtcaaattaggtttggttcggacgagtaaccacgggtatgggttttgttgccatgcc 36128018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 9632344 - 9632563
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||           |||||||||| ||||||| ||||||||||||| ||||||||||||||||    
T  9632344 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacc 9632443  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  |||||||||| |||||||| |||||||||| |||||||||||||||  ||||||||||| | |||||||| | ||    
T  9632444 cgtgtttcgagatcggggaaaacccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggt 9632543  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  9632544 atgggttttgttgccatgcc 9632563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 26 - 188
Target Start/End: Original strand, 37106666 - 37106833
Alignment:
Q  26 atatcaacataaagtagttttttacatttggg-----tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    |||||||||||||||| |||||||||||||||     |||||||| || |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  37106666 atatcaacataaagtaattttttacatttgggacgggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcgg 37106765  T
Q  121 agaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
     ||||||  |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||    
T  37106766 ggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 37106833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 13830694 - 13830905
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  13830694 ataacataacatatcaacataaagtaattttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgttacc-gtcccatacc 13830792  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||| |||||||  ||||||  ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | |||||||| | ||    
T  13830793 cgtgttttgagatcgaggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggt 13830892  T
Q  204 atagattttgttg 216  Q
    || | ||||||||    
T  13830893 atgggttttgttg 13830905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 13705441 - 13705267
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaa------ 149  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| || ||||| ||||||| ||||||||||||| ||||||          
T  13705441 ggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccatacccaaaccctg 13705342  T
Q  150 tcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||| | ||||   |||||||||||||||    
T  13705341 tcaaaacggggaaaacccgtcaaattgggtatggttcggacgggtaaccatgggtatgagttttgttgccatgcc 13705267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 45115569 - 45115703
Alignment:
Q  58 tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaact--tatacccatacccaaacccaatcaaaa 155  Q
    |||||||| ||| |||||||||||||||| |||||||||| ||||||||||||| || ||||  |||||||  |||||||||||||||||||| ||||||    
T  45115569 tatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcgaggaaaactcatatacccatacccaaacccagtcaaaa 45115668  T
Q  156 cggggaaaacccgtcaaattaggtttggttcggac 190  Q
    |||||||||||||||||||| | ||||||||||||    
T  45115669 cggggaaaacccgtcaaattggatttggttcggac 45115703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 55 - 188
Target Start/End: Complemental strand, 37472840 - 37472707
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaa 154  Q
    ||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||   |||| |||||||||||||| |||||    
T  37472840 gggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaa 37472741  T
Q  155 acggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||||||||||||  |||||||||||    
T  37472740 acggggaaaacccgtcaaattgagtttggttcgg 37472707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 54 - 193
Target Start/End: Complemental strand, 7314730 - 7314591
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||  | ||||| ||||||  ||||||||| ||||||||| ||||    
T  7314730 tgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccatacccatatccaaacccagtcaa 7314631  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacggt 193  Q
    ||||||||||| ||||||||||  ||||||||||| ||||    
T  7314630 aacggggaaaatccgtcaaattgagtttggttcgggcggt 7314591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 10208561 - 10208379
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||| ||||||||||| |||||||||||||||           |||||||| ||||| |||||||||||| || ||||||||||||||||    
T  10208561 ataacataacatattaacataaagtaattttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacc 10208462  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||  |||| || ||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||    
T  10208461 cgtgttttaagattggggaaaacccatacccatacccaaacccagtcaaaacggggaaaa-ccgtcaaattaactttggttcgg 10208379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 175
Target Start/End: Complemental strand, 8916068 - 8915899
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||| || |||||||||||||||           |||||||| |||||||||||||||||||| |||||||||||||||||    
T  8916068 ataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacc 8915969  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
    ||||||| |||||| ||||||||  ||||||||| |||||| || |||||||||| |||| ||||||||||    
T  8915968 cgtgttttgagatc-gagaaaacccatacccatatccaaactcagtcaaaacgggaaaaatccgtcaaatt 8915899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 184
Target Start/End: Complemental strand, 44746193 - 44746061
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||| |||||  |||||||| ||||||||| ||||||||||||||  ||||||| || ||||| ||||||  | | |||||||||||| |||||    
T  44746193 tttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactcaatc 44746094  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggt 184  Q
    |||||||||||||||||||||||| ||||||||    
T  44746093 aaaacggggaaaacccgtcaaattgggtttggt 44746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 10920649 - 10920815
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||| |||||||||| ||||       ||||||| ||||||| ||||||||| ||||   ||||||||||||||||||| |    
T  10920649 atttgggtatgggttcggggtggatacctatatatccgt-------cccatactcgtgttttgagatcggaaaaaatccatacccatacccaaacccagt 10920741  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||  ||||||| | |||||||||| | |||||||| | |||| | |||||||||||||||    
T  10920742 caaaacggggaaaacctatcaaattggatttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 10920815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 6027968 - 6027813
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||  | ||||| ||||||            |||||||||||||||||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaac------------ccaaacccaatcaaaac 6027881  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||||| |||||||||||| ||| |||||| |||||| | |||||||| ||||||    
T  6027880 ggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatgcc 6027813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 37999441 - 37999618
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||| ||| ||||||||||| ||||||||||||||||||| ||||||    
T  37999441 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacc 37999540  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||| |||||||| ||||      ||||||||||| ||||| |||||| |||| ||||||||||||||   ||||||||||    
T  37999541 cgtgttttgagatcggggaaa------acccatacccatacccagtcaaaatgggggaaacccgtcaaattgaatttggttcgg 37999618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 12341648 - 12341745
Alignment:
Q  95 gtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||||||||| |||||| || ||||| ||||||  |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  12341648 gtcccatacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacgg 12341745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 24 - 188
Target Start/End: Complemental strand, 12193950 - 12193775
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           ||||| || | |||||||| |||||||||| ||||||||||||||||||||||      
T  12193950 acatatcaacataaagtaattttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttct 12193851  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    || |||||  |||||  |||| |||||||||||||| ||||||  || ||||||||||||||| ||||||| ||||    
T  12193850 gaaatcgggaaaaacacatactcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggtttggctcgg 12193775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 19104925 - 19104749
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatac----ccgtgtttcgagatcggagaaaacttatacccatacccaaaccc 147  Q
    |||| |||||| || | ||||| |||||||||||||||||| | ||||||||    |||||||| || ||||| ||||||  | || |||||||||||||    
T  19104925 tttgagtatggattcgaggtggatacctatatacccgttacacatcccatacaggcccgtgtttggaaatcggggaaaacccaaactcatacccaaaccc 19104826  T
Q  148 aatcaaaacggggaaaacccgtcaaattaggtttggttcgga-cggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||  ||||||| ||||||| |||||| ||||||  ||||||||   |||||| |||||||||||||||    
T  19104825 aatcaaaacggaaaaaacccatcaaattgggtttgattcggattggtaaccacatgtataggttttgttgccatgcc 19104749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 35248469 - 35248336
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||| |  ||||  ||||||  | |||| ||||||||| |||||    
T  35248469 tttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactcaatc 35248370  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||  | ||||||||| ||||| | |||||||||    
T  35248369 aaagtgaggaaaacccatcaaaatgggtttggtt 35248336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 45256832 - 45256940
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| ||||||||||| ||||||||| ||| ||||| ||||||||||||| || ||||| ||||||| |||| |||| ||| ||||| ||||||    
T  45256832 ggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactcatactcatatccacacccagtcaaaa 45256931  T
Q  156 cggggaaaa 164  Q
    |||| ||||    
T  45256932 cgggaaaaa 45256940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 31942270 - 31942136
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtg-tttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||| ||| || ||||  || |||  | ||||||| ||||||||| |    
T  31942270 tttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaacccagt 31942171  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||| |||| ||||||| |||||||  ||||||||    
T  31942170 caaagcgggaaaaacccatcaaattgagtttggtt 31942136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 38342603 - 38342501
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||| || |||| |||  | ||||| ||||||| | ||||||| ||||||||||||    
T  38342603 tttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaacccatatccaaacccaatc 38342504  T
Q  152 aaa 154  Q
    |||    
T  38342503 aaa 38342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 41579417 - 41579482
Alignment:
Q  239 atgcgctaccgatttaatgcaatggtgctatcaagttaaacttttggtataacccatgcaaatatg 304  Q
    ||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  41579417 atgcgctactgatttaatgcaatgatgccatcaagttaaacctttggtataacccatgcaaatatg 41579482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 43371558 - 43371660
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||||||||||||||| ||||| ||||||||||||||| ||||||| |||  | ||||| ||||||| | ||| |||||||||| || ||    
T  43371558 tttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaaactcagtc 43371657  T
Q  152 aaa 154  Q
    |||    
T  43371658 aaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 18106155 - 18106082
Alignment:
Q  100 atacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaa 173  Q
    |||||||||||| |||||||| ||||||  ||||||||| ||||||||| ||||||||||||||| ||||||||    
T  18106155 atacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaaa 18106082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 299 - 370
Target Start/End: Original strand, 41579499 - 41579568
Alignment:
Q  299 aatatgtcagtttccaatgcaagtctctctatacatccaaagttaaatatatacatttccatacatgctgca 370  Q
    |||||||| |||||||||||||| |||||||  |||||| |||||||||||||| |||||||||||||||||    
T  41579499 aatatgtcggtttccaatgcaaggctctcta--catccagagttaaatatatacgtttccatacatgctgca 41579568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 14331532 - 14331648
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| || |||||||| ||||| |||||||||||||||||||| || |||  | || || ||||      ||||||||||||||| | ||    
T  14331532 tttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaa------acccatacccaaacctagtc 14331625  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| |||||||||||||||||||    
T  14331626 aaaccggggaaaacccgtcaaat 14331648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 24051705 - 24051586
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaa 154  Q
    ||||||||||| ||||| ||||| ||||| || |||||||||||||||| ||| |||  | |||||||||| |  | ||||||||||||||||||| |||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaaacccaattaaa 24051606  T
Q  155 acggggaaaacccgtcaaat 174  Q
     ||| ||||| || ||||||    
T  24051605 tcggagaaaatccatcaaat 24051586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 25210386 - 25210441
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||||||||||||    
T  25210386 ggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttt 25210441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 42798072 - 42798013
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  42798072 tttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgttt 42798013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 15546751 - 15546871
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||  |||||||||  ||||  |  |||||||||||||||||||||||| || ||||| ||||||  | |||||| |||| | ||| ||||    
T  15546751 tgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatgcccagatccagtcaa 15546850  T
Q  154 aacggggaaaacccgtcaaat 174  Q
    | |||||||||| ||||||||    
T  15546851 agcggggaaaactcgtcaaat 15546871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 22900801 - 22900921
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| ||| ||||||||||  ||||  |||||||| |||||||||||||||||| || |||||  |||||  | ||||||||||| ||| | ||||    
T  22900801 tgggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaagtcaa 22900900  T
Q  154 aacggggaaaacccgtcaaat 174  Q
    |  | ||||||||||||||||    
T  22900901 agtgaggaaaacccgtcaaat 22900921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 26755737 - 26755867
Alignment:
Q  44 tttttacatttgggtatgggtttgggg-tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccataccca 142  Q
    |||||||||| ||||| |||||||||  ||||||| ||||| |||||||  ||||| |||||| | |||  | |||| |||||||  | || ||||||||    
T  26755737 tttttacattcgggta-gggtttgggtatgggtacatatatccccgttaatcgtccgatacccatattttaaaatcgaagaaaacccaaactcataccca 26755835  T
Q  143 aacccaatcaaaacggggaaaacccgtcaaat 174  Q
    |||||| ||||| |||| ||||||||||||||    
T  26755836 aacccagtcaaatcgggaaaaacccgtcaaat 26755867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 14540804 - 14540862
Alignment:
Q  70 gtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaact 128  Q
    |||||| ||||||||||||||||| ||| ||||||||||||| || ||||| |||||||    
T  14540804 gtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaact 14540862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 42798002 - 42797913
Alignment:
Q  134 ccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||| |||||||| ||||||| |  ||||||||||||||||| |||||||||| | |||||||| | |||| | |||||||||||||||    
T  42798002 ccatactcaaacccagtcaaaacaga-aaaacccgtcaaattagatttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 42797913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 10920603 - 10920644
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  10920603 ataacataacatatcaacataaagtaattttttacatttggg 10920644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 16226799 - 16226762
Alignment:
Q  74 gtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||||||||||||||||||| |||||    
T  16226799 gtacctatatacccgttacccgtcccatacccttgttt 16226762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 3547171 - 3547239
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    ||||| |||||||| ||||||||||| |||||  |||||||||||||| ||||||| ||| || |||||    
T  3547171 tttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 4961535 - 4961479
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtg 108  Q
    |||||||||||||| | |||| |||||||||| || ||||| |||||||||||||||    
T  4961535 tttgggtatgggttcgaggtgtgtacctatatccctgttacacgtcccatacccgtg 4961479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 35965416 - 35965463
Alignment:
Q  141 caaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||||| ||| ||||||| |||||| ||||||||||||||    
T  35965416 caaacccaatcaaagcggagaaaaccagtcaaaataggtttggttcgg 35965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36128238 - 36128196
Alignment:
Q  16 ataacagaacatatcaacataaagtagtt-ttttacatttggg 57  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  36128238 ataacataacatatcaacataaagtagtttttttacatttggg 36128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 42102688 - 42102646
Alignment:
Q  132 acccatacccaaacccaatcaaaacggggaaaacccgtcaaat 174  Q
    ||||||||||||||||||||||| ||||||||| || ||||||    
T  42102688 acccatacccaaacccaatcaaatcggggaaaatccatcaaat 42102646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 127
Target Start/End: Original strand, 33175252 - 33175309
Alignment:
Q  70 gtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||||||||| || |||||| ||| |||||||||||  | ||||||||||||    
T  33175252 gtgggtacctatatacacgctacccgacccgtacccgtgttttaaaatcggagaaaac 33175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 17845475 - 17845399
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaact 128  Q
    ||||||||||||||  |||||||||| |||||  || ||||| ||| ||||| ||||||| || |||| ||||||||    
T  17845475 tttgggtatgggttaagggtgggtacttatatgtccattaccggtctcatactcgtgttttgaaatcgaagaaaact 17845399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 18485653 - 18485697
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgt 96  Q
    ||||||||||||||  |||||||||| ||||| ||||||||||||    
T  18485653 tttgggtatgggttcagggtgggtacatatatccccgttacccgt 18485697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 32303065 - 32303237
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| ||    
T  32303065 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtc 32303164  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| |||||| ||||| | |||||||| | |||| | |||||||||||||||    
T  32303165 aaaacggggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgggtatgggttttgttgccatgcc 32303237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 24927906 - 24928125
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||| ||||||||||||||||||||||||           |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  24927906 ataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacc 24928005  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||| | ||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | |||||||  | ||    
T  24928006 cgtgtttcgagatcagggaaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggt 24928105  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  24928106 atgggttttgttgccatgcc 24928125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 27 - 217
Target Start/End: Complemental strand, 4230839 - 4230648
Alignment:
Q  27 tatcaacataaagtagttttttacatttgggtatgggtttgggg-tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaa 125  Q
    ||||||||||||||| ||||||||||||||| | |||||||||  |||||||||||||||||||||| ||||||||||| |||||| |||||||| ||||    
T  4230839 tatcaacataaagtaattttttacatttggg-acgggtttgggtatgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaa 4230741  T
Q  126 acttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgc 217  Q
    ||  ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||| | ||||||||   |||| |||||||||||    
T  4230740 acccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacatgtatggattttgttgc 4230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 20399596 - 20399768
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||  | ||||||||||||||||| ||    
T  20399596 tttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaacccatacccaaacccagtc 20399695  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||| ||||||||| ||||||||||| |  |||||||| | |||| | |||||||||||||||    
T  20399696 aaaacggggaaaactcgtcaaattgggtttggttcgagcgggtaaccacgggtattggttttgttgccatgcc 20399768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 27932422 - 27932553
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||| || ||||| ||||||  ||||||||||||||||||| |||||||    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  157 ggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||||| ||||||||||||    
T  27932522 ggggaaaacccgtcaaattgggtttggttcgg 27932553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 29108904 - 29108767
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||  | |||||  |||||  ||||||||||||||||||| ||||    
T  29108904 tgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccatacccatacccaaacccagtcaa 29108805  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacg 191  Q
    |||||||||||||||||||||| |||||||||||||||    
T  29108804 aacggggaaaacccgtcaaattgggtttggttcggacg 29108767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 40248453 - 40248321
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||| || ||||| |||||| |||||||||||||||||||| ||||    
T  40248453 tgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacatatacccatacccaaacccagtcaa 40248354  T
Q  154 aacggggaaaacccgtcaaattaggtttggttc 186  Q
    |||||| ||||||||||||||| ||||||||||    
T  40248353 aacgggaaaaacccgtcaaattgggtttggttc 40248321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 45236022 - 45236192
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||| || |||||||||||||||           |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  45236022 ataacataacatatcaacataaattaattttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacc 45236121  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
    ||||||| || ||| | ||||||| |||||||||| ||||| || ||||||||||||||||||||||||||    
T  45236122 cgtgttttgaaatcagggaaaactcatacccatactcaaactcagtcaaaacggggaaaacccgtcaaatt 45236192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 39445658 - 39445521
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| ||| |||||||||||||||| |||||||||| ||||||||||||||||| || |||||  |||||  ||||||||||||||||| | ||||    
T  39445658 tgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacctagtcaa 39445559  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacg 191  Q
    ||||||||||| ||||||||||  ||||||||||||||    
T  39445558 aacggggaaaatccgtcaaattgagtttggttcggacg 39445521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 34777069 - 34777204
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||||||||||| |||||||| |||||     ||||||||||||||||| |    
T  34777069 atttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgg-gaaaa-----acccatacccaaacccagt 34777162  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||    
T  34777163 caaaacgggaaaaacccgttaaattgggtttggttcggacgg 34777204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 1012623 - 1012794
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||  | ||||| ||||||  | || ||||||||||| |||||    
T  1012623 tttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgttt-taaatcggggaaaacccaaactcatacccaaactcaatc 1012721  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||| ||||||||||||||||| |||||| ||| ||  |||||||| | |||| |||||| ||||||||||    
T  1012722 aaaacgaggaaaacccgtcaaattgggtttgattcgggtgggtaaccacgggtatggattttattgccatgcc 1012794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 17469259 - 17469383
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||            ||||||||||| ||    
T  17469259 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaa------------acccaaacccagtc 17469346  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  17469347 aaaacggggaaaatccgtcaaattgggtttggttcgg 17469383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 24568941 - 24569078
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||| ||||||||| ||||||| |||||||||||||| |||| ||||||||||| ||||  || |||||  ||||   ||||||||||| |||||||||    
T  24568941 atttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccatacctaaacccaat 24569040  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  24569041 caaa-cggggaaaacccgtcaaattaggtttggttcgga 24569078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 1063510 - 1063689
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccat------acccaaa 144  Q
    ||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||| || |||||  |||||  ||||||||      ||||| |    
T  1063510 atttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccacacccaca 1063609  T
Q  145 cccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||| |||||||||||||||||||||||||  |||||||||||| | |||||||| | ||||   |||||||||||||||    
T  1063610 cccagtcaaaacggggaaaacccgtcaaatcgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcc 1063689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 5858706 - 5858566
Alignment:
Q  82 atacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggttt 181  Q
    ||||||||||||||||||||||||||||||  | |||||  |||||  | |||||||||||||||||||||||||||||||||||||||||||| | |||    
T  5858706 atacccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggattt 5858607  T
Q  182 ggttc-ggacggtaaccaggagtatagattttgttgccatg 221  Q
    ||||| ||  ||||||||   |||| |||||||||||||||    
T  5858606 ggttcgggtaggtaaccacaggtatggattttgttgccatg 5858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 24 - 175
Target Start/End: Complemental strand, 24870147 - 24869985
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           |||||| | ||||||||||||||||||||||||||||||| |||||||||||||     
T  24870147 acatatcaacataaagtaattttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgtttt 24870048  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
     | ||||| ||||||| ||| |||||||||||  || |||||||||| |||||||||||||||    
T  24870047 aaaatcggggaaaactcatagccatacccaaattcagtcaaaacgggaaaaacccgtcaaatt 24869985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 187
Target Start/End: Original strand, 17220682 - 17220851
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tatgggttt-ggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagat 117  Q
    |||||||||||||||||| | |||||||||||||     |||||| || |||||||||||||||||| || | | || |||||||||||||||| || ||    
T  17220682 acatatcaacataaagtaatcttttacatttgggacgggtatggggttcggggtgggtacctatataaccatcatccatcccatacccgtgttttgaaat 17220781  T
Q  118 cggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg 187  Q
    ||| |||||   |||||||||||||||| || |||||| ||||||||||||||||||| | |||||||||    
T  17220782 cggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggttcg 17220851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 27777282 - 27777145
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||| |||  | |||||| ||||| |||| |||||| || |||||  |||||| | || |||||||||||||| ||    
T  27777282 tttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagtc 27777183  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  27777182 aaaacggagaaaacccgtcaaattaagtttggttcgga 27777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 37961046 - 37960910
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| |||||| ||||||||||||| |||||| |||||||||||||||||  | ||||| ||||||  | || |||||||||||| | ||    
T  37961046 tttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaacctagtc 37960947  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||| ||||||| |||||||||||| |||||||    
T  37960946 aaaacgggaaaaacccatcaaattaggttcggttcgg 37960910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 192
Target Start/End: Original strand, 35215551 - 35215679
Alignment:
Q  63 gtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaa 162  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||| ||||||  | |  |||||||||||||  |||||||||| ||    
T  35215551 gtttggggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatcgg-gaaaacccaaaatcatacccaaacccggtcaaaacgggaaa 35215649  T
Q  163 aacccgtcaaattaggtttggttcggacgg 192  Q
    |||| |||||||| ||||||| ||||||||    
T  35215650 aaccggtcaaattgggtttgggtcggacgg 35215679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 43113711 - 43113574
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||| ||||||||| || |||||  |||||  |  | ||||| |||||||| |    
T  43113711 atttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcatacgcaaacccagt 43113612  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| | |||||||||||| ||||| ||||||||||||    
T  43113611 caaagcagggaaaacccgttaaattgggtttggttcgg 43113574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 14687403 - 14687536
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||| ||| ||||| || ||| | ||||||||||| |||||| || ||||| ||||||  | | ||||||||||||||||||    
T  14687403 tttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaatc 14687502  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||  |||||||||||| |||||| |||| ||||    
T  14687503 aaagtggggaaaacccgccaaattgggttaggtt 14687536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 34139452 - 34139580
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||| || |||||||||||||||||||| |||||  |||| ||| ||||||||  | ||||| ||||||  | || |||||||||||||| ||    
T  34139452 tttgggtatgg-ttcggggtgggtacctatatacctgttacatgtcctatatccgtgtttttaaatcggggaaaaccaa-acacatacccaaacccagtc 34139549  T
Q  152 aaaacggggaaaacccgtcaaattaggtttg 182  Q
    |||||| ||||||||||||||||| ||||||    
T  34139550 aaaacgaggaaaacccgtcaaattgggtttg 34139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 2075873 - 2075784
Alignment:
Q  97 cccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    ||||||||| ||||| ||||||||  |||||  ||||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||    
T  2075873 cccatacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttc 2075784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 11255090 - 11254961
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| |  ||||||||||||||||| |||| ||||||||||||||||||| || | ||| ||||      ||||||||||||||| | ||||    
T  11255090 tgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagcgg-gaaa------acccatacccaaacctagtcaa 11254998  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    |||||  ||||||||||||||| | ||||||||||||    
T  11254997 aacggaaaaaacccgtcaaattggatttggttcggac 11254961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 192
Target Start/End: Original strand, 14155536 - 14155676
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||  |||||||||| ||  ||||| | |||||||| ||  |||||||||||| || |||||  |||||  | || |||||||||||||| ||    
T  14155536 tttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtc 14155635  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    | | |||||||||||||||||||| |||||||||| |||||    
T  14155636 ataccggggaaaacccgtcaaattgggtttggttcagacgg 14155676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 30481505 - 30481369
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||| | | |||| |||| ||||| ||| ||| || ||| |  |||||  | || ||||| |||||||||||    
T  30481505 tttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaactcatactcaaacccaatc 30481406  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||| ||||||| || |||| |||||||||||||||    
T  30481405 aaaacagggaaaatccatcaatttaggtttggttcgg 30481369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 105
Target Start/End: Original strand, 2075864 - 2075915
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccataccc 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2075864 tgggtatgggttcggggtgggtacctatatacccgttacccgtcccataccc 2075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 15068668 - 15068550
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaa 154  Q
    ||||||||||| ||||||| ||| ||||| ||||||||| ||||| ||||||| ||| || ||||| ||||||    ||||||||||| ||||| |||||    
T  15068668 gggtatgggttcggggtggatacatatat-cccgttacctgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccagacccagtcaaa 15068570  T
Q  155 acggggaaaacccgtcaaat 174  Q
     |||||||||||||||||||    
T  15068569 tcggggaaaacccgtcaaat 15068550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 14186324 - 14186484
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||| |||||||||||||||| || ||| |||||||           || |||||||||||    
T  14186324 tttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatc-gagaaaa-----------actcaaacccaatc 14186411  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacg-gtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||| ||||||||||||||| ||||||| || | ||| ||||||| ||||||   |||||||| ||||||    
T  14186412 aaaacggagaaaacccgtcaaatcaggtttgattagaacgagtaaccacgagtatgagttttgttgtcatgcc 14186484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 8545433 - 8545358
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||| ||||||||| |||||||||| |||||| |||||||| ||| |||||||||||||| || ||||||||||||    
T  8545433 tttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaac 8545358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 29416188 - 29416099
Alignment:
Q  135 catacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||| || |||||||||||||||||||||||||| | |||||||| ||  |||| || |||||||  ||||||||||||||||    
T  29416188 catacccaaactcagtcaaaacggggaaaacccgtcaaattggatttggttcgggtgggtacccgggagtatgaattttgttgccatgcc 29416099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 6388581 - 6388477
Alignment:
Q  71 tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtc 170  Q
    ||||||||||||| |||||||||||||   |||||||||||  | ||||| ||| ||  | |||||||||||||| || ||||||||| |||| ||||||    
T  6388581 tgggtacctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtc 6388482  T
Q  171 aaatt 175  Q
    |||||    
T  6388481 aaatt 6388477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 33631981 - 33631917
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatc 118  Q
    |||||||||||||||||||||||| ||||| ||| |||| |||||||||||| ||||| ||||||    
T  33631981 tgggtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgttttgagatc 33631917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 5700359 - 5700485
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| | |||||||| |||||| ||||||||| ||| |||||| |||||| || |||||  ||||||||            |||||| |    
T  5700359 atttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaactta------------aacccagt 5700446  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||||||||  ||||||||||||| |||||||||||||||    
T  5700447 caaaacggaaaaaacccgtcaaaataggtttggttcgga 5700485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 172
Target Start/End: Complemental strand, 17084191 - 17084077
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||| |||| ||| |||||||||| |||||| ||||||||||||| | |||||||||||  | ||||||||||      ||||| | | ||||||| ||    
T  17084191 tttggatatgagttcggggtgggtatctatatccccgttacccgtctcgtacccgtgttttaaaatcggagaaa------acccaaatcaaaacccagtc 17084098  T
Q  152 aaaacggggaaaacccgtcaa 172  Q
    ||| |||||||||||||||||    
T  17084097 aaagcggggaaaacccgtcaa 17084077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 27056634 - 27056517
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||  ||||  |||||||||||||||||||| ||  || || |||||  |||||  | ||||||| |||||||||  |||| |    
T  27056634 gtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagc 27056535  T
Q  157 ggggaaaacccgtcaaat 174  Q
    | ||||||||||||||||    
T  27056534 gaggaaaacccgtcaaat 27056517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 173
Target Start/End: Original strand, 28345495 - 28345616
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||| ||||||| | |||||||| |||  ||||||||||| |  |||||  ||||   | ||| ||||| ||||||| ||    
T  28345495 tttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagtc 28345594  T
Q  152 aaaacggggaaaacccgtcaaa 173  Q
    ||| |||| |||||||||||||    
T  28345595 aaagcgggaaaaacccgtcaaa 28345616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 28977245 - 28977204
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  28977245 ataacataacatatcaacataaagtagttttttacatttggg 28977204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2075965 - 2075924
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  2075965 ataacataacatatcaacataaagtaattttttacatttggg 2075924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 15173927 - 15173842
Alignment:
Q  89 ttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaat 174  Q
    ||||||||||| ||||||| ||| || |||||  |||||| | || |||||||||||||| ||||| | | |||||||||||||||    
T  15173927 ttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccagtcaaatcagagaaaacccgtcaaat 15173842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 30904049 - 30904109
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||| |||||||||||| |||||  || ||||||||| | |||||||||||    
T  30904049 atttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttt 30904109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 36131924 - 36131877
Alignment:
Q  141 caaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||||  |||| || ||||||||||||||||||||    
T  36131924 caaacccaatcaaaacggaaaaaatccatcaaattaggtttggttcgg 36131877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 9642402 - 9642360
Alignment:
Q  85 cccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    ||||||||||||||||||||||||||| || ||||| ||||||    
T  9642402 cccgttacccgtcccatacccgtgttttgaaatcggggaaaac 9642360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 34021485 - 34021583
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||| ||||||||||| |||||||||| || ||||| ||| ||||| |||| |||  | ||||  ||||||||| || ||||| |||||||||| ||||    
T  34021485 gtattggtttggggtgtgtacctatattcctgttactcgttccatatccgtattttaaaatcgtggaaaacttaaactcatactcaaacccaataaaaa 34021583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 29108945 - 29108912
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  29108945 acatatcaacataaagtaattttttacatttggg 29108912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 40248494 - 40248461
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  40248494 acatatcaacataaagtaattttttacatttggg 40248461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 29089811 - 29089883
Alignment:
Q  78 ctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    |||||||||| ||| ||||| ||||||||||| | || |||| |||| || || || ||||||||||||||||    
T  29089811 ctatatacccattatccgtctcatacccgtgtcttgaaatcgaagaatacctaaactcatacccaaacccaat 29089883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 225 - 370
Target Start/End: Complemental strand, 37148326 - 37148181
Alignment:
Q  225 cttcatatggccttatgcgctaccgatttaatgcaatggtgctatcaagttaaacttttggtataacccatgcaaatatgtcagtttccaatgcaagtct 324  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  37148326 cttcatatacccttatgcgctactgatttaatgcaatggtgctatcaagttaaacctttggtataactcatgcaaatatgtcagtttccaatgcaagtct 37148227  T
Q  325 ctctatacatccaaagttaaatatatacatttccatacatgctgca 370  Q
    ||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  37148226 ctcaatacatccatagtgaaatatatacatttccatacatgctgca 37148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 221
Target Start/End: Original strand, 7608933 - 7609150
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||| ||||||||||||||||||           |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7608933 ataacataacatatcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 7609032  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  ||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||| ||  |||||||| ||||    
T  7609033 cgtgtttcgagatcggggaaaacccatacccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagttcgggtgggtaaccacgagt 7609132  T
Q  204 atagattttgttgccatg 221  Q
    || | |||||||||||||    
T  7609133 atgggttttgttgccatg 7609150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 6382357 - 6382185
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||    
T  6382357 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccatacccatacccaaacccagtc 6382258  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||| |||||||||||||||||||| |||||| ||||| | |||||||| | |||| | |||| ||||||||||    
T  6382257 aaagcggggaaaacccgtcaaattgggtttgattcgggcgggtaaccacgggtatgggttttattgccatgcc 6382185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 44317545 - 44317717
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||| ||    
T  44317545 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaacccagtc 44317644  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacg-gtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||| |||||||||| |||||| ||||| || ||||||| | |||| | |||||||||| ||||    
T  44317645 aaaacggggaaaatccgtcaaattgggtttgattcgggcgagtaaccacgggtatgggttttgttgccttgcc 44317717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 5902739 - 5902533
Alignment:
Q  23 aacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||||||||||||||||||||||           |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5902739 aacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttt 5902640  T
Q  112 cgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagatt 210  Q
    ||||||||| ||||      ||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| | |||||||| | |||||| ||    
T  5902639 cgagatcggggaaa------acccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggtt 5902546  T
Q  211 ttgttgccatgcc 223  Q
    |||||||||||||    
T  5902545 ttgttgccatgcc 5902533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 11123001 - 11122782
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           |||||||| ||||||||||||||||||||||||||||||||||||||    
T  11123001 ataacaaaacatatcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 11122902  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||||||||||  |||||||||||||||| || |||||||||  |||| ||||||||||  ||||||||||| | |||||||| | ||    
T  11122901 cgtgtttcgagatcggagaaaacccatacccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacgggt 11122802  T
Q  204 atagattttgttgccatgcc 223  Q
    ||   |||||||||||||||    
T  11122801 atgagttttgttgccatgcc 11122782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 43893191 - 43893409
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           ||||  || ||||||| ||||||||||||||||||||||||||||||    
T  43893191 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacc 43893290  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| | ||||  ||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| | |||||||| | ||    
T  43893291 cgtgtttcgagatcgg-ggaaacccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgggcgggtaaccacgggt 43893389  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  43893390 atgggttttgttgccatgcc 43893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 11028083 - 11028255
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||| ||| ||    
T  11028083 tttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaatccagtc 11028182  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||| |||||||||||||||| |||||||||| ||  |||||||| | |||| | |||||||||||||||    
T  11028183 aaaacggagaaaacccgtcaaattgggtttggttcgggtgggtaaccacgtgtatgggttttgttgccatgcc 11028255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 31918643 - 31918471
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||  |||| |||||||||||||| ||    
T  31918643 tttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccatactcatacccaaacccagtc 31918544  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| |||||||||||| | |||||||| |  ||| | |||||||||||||||    
T  31918543 aaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacggatatgggttttgttgccatgcc 31918471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 23 - 188
Target Start/End: Original strand, 21423831 - 21424007
Alignment:
Q  23 aacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21423831 aacatatcaacataaagtagttttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgttt 21423930  T
Q  112 cgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||| || ||||||  ||||||||||||||||||| |||||||||| |||| |||||||||| | ||||||||||    
T  21423931 cgagattggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgg 21424007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 55826756 - 55826536
Alignment:
Q  16 ataacagaacatatcaacataaagtagtttttt-acatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatac 103  Q
    |||||| |||||||||||||||||||||||||| |||||||||           |||||||| |||||||||||||||||||||||||||||||||||||    
T  55826756 ataacataacatatcaacataaagtagtttttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatac 55826657  T
Q  104 ccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggag 202  Q
    | ||||||||||||||| ||||||  |||| |||| ||||||||| ||||||| ||||||| |||||||||| | |||||||||||| |||||||| | |    
T  55826656 ctgtgtttcgagatcggggaaaacccatactcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggttcggacgggtaaccacggg 55826557  T
Q  203 tatagattttgttgccatgcc 223  Q
    ||| | |||||||||||||||    
T  55826556 tatgggttttgttgccatgcc 55826536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 15987347 - 15987211
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||  | ||| | ||||||| ||||||||||||||||||||||    
T  15987347 tttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaacccaatc 15987248  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| || |||||||||||||||| ||||||||||||    
T  15987247 aaaatggagaaaacccgtcaaattgggtttggttcgg 15987211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 47550438 - 47550302
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||| ||    
T  47550438 tttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcatacctatacccaaacccagtc 47550339  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| |||||||| ||| ||||||  |||||||||||    
T  47550338 aaaatggggaaaatccgccaaattgagtttggttcgg 47550302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 48459444 - 48459663
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||||||| |||||||||||||||||||| ||||||||| |||||||    
T  48459444 ataacataacatatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacc 48459543  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    | ||||| || ||||| ||||||  ||| |||||| |||| |||||||||| ||| ||||||| ||||||| |||||| ||||||| |||||||  |  |    
T  48459544 catgttttgaaatcggggaaaacccatatccatactcaaatccaatcaaaatgggaaaaacccatcaaatttggtttgattcggacgggtaaccgcggat 48459643  T
Q  204 atagattttgttgccatgcc 223  Q
    || |||||||||||||||||    
T  48459644 atggattttgttgccatgcc 48459663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 26564841 - 26565013
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| || ||||| |||| || | || |||||||||||||| ||    
T  26564841 tttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaacccagtc 26564940  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||  ||||| |||||||||| | |||||||| ||  |||||||| | |||| | |||||||||||||||    
T  26564941 aaaacgaagaaaatccgtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttgccatgcc 26565013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 39046964 - 39047134
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| || || || ||||||  |||||||||| ||||  || ||||    
T  39046964 tgggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccatacccatactcaaattcagtcaa 39047063  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||| |||||||| ||||||| |||||| ||||||| |||||||  |  ||||| |||||||||||||||    
T  39047064 aacggagaaaacccatcaaattgggtttgattcggacgggtaaccgtggatataggttttgttgccatgcc 39047134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 6482120 - 6481950
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||||||  | || || ||||||  | ||||||||||||||||||||    
T  6482120 tttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaacccaatc 6482021  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatg 221  Q
    ||||| | ||||| ||||||||||  ||||| |||||  || |||||| | |||||| |||||||||||||    
T  6482020 aaaacagagaaaatccgtcaaattgagtttgattcgggtggataaccacgggtataggttttgttgccatg 6481950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 54 - 188
Target Start/End: Original strand, 31752468 - 31752602
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| || ||||| ||||||  ||||||||| ||||||||||||||    
T  31752468 tgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccatacccatatccaaacccaatcaa 31752567  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||  ||||||||||||||| | |||| |||||    
T  31752568 aacggtaaaaacccgtcaaattggatttgattcgg 31752602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 32585499 - 32585626
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |      |||||||||||||| ||    
T  32585499 tttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaatt------catacccaaacccagtc 32585592  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||| |||||||||| |||||||| |||||||||    
T  32585593 aaaaaggggaaaaccggtcaaattgggtttggtt 32585626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 10302096 - 10302216
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||| |||||||||  || || ||||| |||||| || ||||||||||||||||||||||    
T  10302096 tgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaacccatacccaaacccaatcaa 10302195  T
Q  154 aacggggaaaacccgtcaaat 174  Q
    |||||||||||||| ||||||    
T  10302196 aacggggaaaacccatcaaat 10302216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 101 - 223
Target Start/End: Original strand, 37349171 - 37349294
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccag 199  Q
    ||||||||||| || ||||| ||||||| | || |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| | ||||||||     
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccac 37349270  T
Q  200 gagtatagattttgttgccatgcc 223  Q
    | |||| | |||||||||||||||    
T  37349271 gggtatgggttttgttgccatgcc 37349294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 67 - 185
Target Start/End: Original strand, 37107436 - 37107553
Alignment:
Q  67 ggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacc 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || || || ||||||  | || ||||| |||||||| |||||| ||| ||||||    
T  37107436 ggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaattgg-gaaaacccaaactcatacacaaacccagtcaaaatgggaaaaacc 37107534  T
Q  167 cgtcaaattaggtttggtt 185  Q
    ||||||||||  |||||||    
T  37107535 cgtcaaattaaatttggtt 37107553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 19883141 - 19883005
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| |||| |||| ||||||| ||||||||| |||||||||| |||| || ||||||||  | ||||| ||||||  | || ||||| |||||||||||    
T  19883141 tttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactcatactcaaacccaatc 19883042  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||| |||| ||||||||||||||| ||||||||||||    
T  19883041 aaagcgggaaaaacccgtcaaattgggtttggttcgg 19883005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 19534465 - 19534597
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| | |||||||||||||||||| ||||||||||||||||||   |||  | |||||||||||||      ||||||||||||||||     
T  19534465 tttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagattttaaaatcggagaaaact------catacccaaacccaatg 19534558  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    ||||||| |||||||||||||||| | ||||||| ||||    
T  19534559 aaaacggagaaaacccgtcaaattggatttggtttggac 19534597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 42299800 - 42299935
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| |||||||||  ||||||||||||||||||||||||||||| ||||| |||||||| || ||||| |||||   ||||||||||| |||| || ||    
T  42299800 tttgagtatgggttcagggtgggtacctatatacccgttacccgt-ccata-ccgtgttttgaaatcggggaaaatccatacccatacctaaactcagtc 42299897  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||| |||  |||||||||||||||  ||||||||||||    
T  42299898 aaaccggaaaaaacccgtcaaattgagtttggttcgga 42299935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 1724395 - 1724307
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacc 140  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| || ||||| ||||||  | |||||||||    
T  1724395 tttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacc 1724307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 154
Target Start/End: Complemental strand, 47239468 - 47239368
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||  | |||||| ||||   ||||||||| ||||| ||||||||    
T  47239468 tgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatcggaaaaaatccatacccatatccaaatccaatcaa 47239369  T
Q  154 a 154  Q
    |    
T  47239368 a 47239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 32596269 - 32596194
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||| ||||||    
T  32596269 tttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 32596194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 21956899 - 21956763
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||| |||||||| |||||||| | | || |||||||||||  | |||||| |||||  | || |||||||||| |||||     
T  21956899 tttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccgtgttttaaaatcggaaaaaacccaaactcatacccaaatccaatt 21956800  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| ||| |||||| |||||||| | ||||||||||    
T  21956799 aaaatgggaaaaacctgtcaaatttgatttggttcgg 21956763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 39086188 - 39086300
Alignment:
Q  73 ggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaa 172  Q
    ||||||||||| |||||||||||| ||  |||| ||||  || ||||||||||||| | || |||| ||||||||||||||||||| ||||| |||||||    
T  39086188 ggtacctatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaatcaaaacggagaaaatccgtcaa 39086287  T
Q  173 attaggtttggtt 185  Q
    |||  ||||||||    
T  39086288 attgagtttggtt 39086300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 25941148 - 25941263
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||| | ||||||||| ||||| ||||||||||| || |||||  |||||  | || ||| |||||||| ||||    
T  25941148 tttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaatc 25941247  T
Q  152 aaaacggggaaaaccc 167  Q
    |||  |||||||||||    
T  25941248 aaagtggggaaaaccc 25941263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 7985174 - 7985076
Alignment:
Q  88 gttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    |||| ||||||||||||| ||||| || |||||||||||   | ||  |||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  7985174 gttatccgtcccatacccatgttttgaaatcggagaaaatccaaacttatacccaaacccaatcaaaaccaggaaaacccgtcaaattgggtttggttc 7985076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 14606010 - 14605908
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| || |||||||||| | ||||||| ||| || ||||||||||||  | |||||||||||||| || ||    
T  14606010 tttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtc 14605911  T
Q  152 aaa 154  Q
    |||    
T  14605910 aaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 33615395 - 33615277
Alignment:
Q  71 tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtc 170  Q
    ||||||||||||| |||||||||||||||||||| || ||   | ||||  ||||||||| |||||||||||||||||||| || | || |||| | |||    
T  33615395 tgggtacctatatccccgttacccgtcccatacctgttttattaaatcgaggaaaacttaaacccatacccaaacccaatctaagcaggtaaaatctgtc 33615296  T
Q  171 aaattaggtttggttcgga 189  Q
    ||||  |||||||||||||    
T  33615295 aaatcgggtttggttcgga 33615277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 4741296 - 4741162
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||| ||||| || |||| ||||||||||||| |||||  | ||||  ||||||| | || |||| |||||| || || ||||    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtc-aaac 4741198  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||||||||  ||||| ||| |||||||||||||||    
T  4741197 ggggaaaacttgtcaatttatgtttggttcggacgg 4741162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 75 - 186
Target Start/End: Complemental strand, 7334258 - 7334148
Alignment:
Q  75 tacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaat 174  Q
    ||||||||| ||| ||| ||||||| |||| |||||| || ||||| |||||   | | ||||||||||||||| ||||| |||| ||||||||||||||    
T  7334258 tacctatatccccattatccgtcccgtacc-gtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaat 7334160  T
Q  175 taggtttggttc 186  Q
    ||||||||||||    
T  7334159 taggtttggttc 7334148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 12825546 - 12825471
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    ||||||||| ||||  |||||||||| |||||| |||||||||||||||||||||||||| || ||||| ||||||    
T  12825546 tttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaac 12825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 45065259 - 45065381
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| ||| ||||||| ||||| || ||||| |||||| ||||||| ||| || ||||  |||||| || ||| ||||||||||||| ||    
T  45065259 tttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaacccagtc 45065358  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    |||  ||||||||| ||||||||    
T  45065359 aaattggggaaaactcgtcaaat 45065381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 138 - 223
Target Start/End: Complemental strand, 53906337 - 53906251
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||||| ||| |||||  | |||| | |||||||||||||||    
T  53906337 acccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggttcgggcggataaccgtgggtatgggttttgttgccatgcc 53906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 11696811 - 11696951
Alignment:
Q  34 ataaagtagttttttacatttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatac 133  Q
    |||||||| |||||||| ||| || ||| |||||||||||||| ||||||    ||||||  || |||||| |||||| || |||||||||||| || ||    
T  11696811 ataaagtaattttttacttttagg-atgagtttggggtgggtatctatatcattgttacctatctcataccggtgttttgaaatcggagaaaacctaaac 11696909  T
Q  134 ccatacccaaacccaatcaaaacggggaaaacccgtcaaatt 175  Q
    ||||||||||||||| |||| |||  |||||||  |||||||    
T  11696910 ccatacccaaacccagtcaacacgaagaaaacctatcaaatt 11696951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 164
Target Start/End: Complemental strand, 35304601 - 35304489
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||| |||   |||||  | ||  ||||||||  | ||||||| ||||| ||||||    
T  35304601 tttgggtatgagtttggggtaggtacctatatccccgttacccgtcccgtacttatgttttaaaattagagaaaacccaaacccatatccaaatccaatc 35304502  T
Q  152 aaaacggggaaaa 164  Q
    ||||||| |||||    
T  35304501 aaaacggagaaaa 35304489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 39375288 - 39375424
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||| | ||||||||| || ||||||||||||||||||||| |||||||| ||| || ||||| |||||   | || |||| |||||| || ||    
T  39375288 tttgagtatgtgattggggtggatatctatatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtc 39375387  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||  || |||||||||||||||   ||||||||||    
T  39375388 aaaataggaaaaacccgtcaaattgaatttggttcgg 39375424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 42907896 - 42907988
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaa 144  Q
    |||||||||||| | ||||||||||||||||| ||| |||| |||||| || |||||||| ||  |||||||||||| |||  ||||||||||    
T  42907896 tttgggtatgggctcggggtgggtacctatatccccattactcgtcccgtatccgtgttttgaattcggagaaaactcataatcatacccaaa 42907988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 85 - 173
Target Start/End: Original strand, 43309526 - 43309614
Alignment:
Q  85 cccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaa 173  Q
    ||||||||||||||||||||||||||| || |||||  |||||  | || ||||| |||||||| ||||| ||| ||||||||||||||    
T  43309526 cccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgtcaaa 43309614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 15733596 - 15733497
Alignment:
Q  67 ggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacc 166  Q
    ||||||||||| |||||  |||||||||||| | ||||||| ||| || ||||  ||||||| ||| ||||||||||||| ||| ||| |||||||||||    
T  15733596 ggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactcatatccatacccaaacctaataaaatcggggaaaacc 15733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 19548985 - 19548887
Alignment:
Q  89 ttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||| |||| |||||| || ||||| ||||||   || ||||||||||||||| |||||  |||||||| |||||||||| ||||||||||||    
T  19548985 ttacccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaagaggggaaaa-ccgtcaaattgggtttggttcgg 19548887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 29527822 - 29527897
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||| | ||||||| ||| || ||||| ||||||    
T  29527822 tttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaac 29527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 1866634 - 1866512
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||| ||| ||||| | | ||||||||| | ||||||| ||| || |||||  |||||  |||| |||||||| ||| | ||    
T  1866634 tttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacccagacctagtc 1866535  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| ||||||||| |||||||||    
T  1866534 aaatcggggaaaatccgtcaaat 1866512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 74 - 192
Target Start/End: Original strand, 30672993 - 30673111
Alignment:
Q  74 gtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaa 173  Q
    |||| ||||| ||| ||| ||||||| ||||||| |||  | |||||||||||   | || |||||||||||||||||||| | ||||||||||||||||    
T  30672993 gtacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaaactcatacccaaacccaatcaaatcagggaaaacccgtcaaa 30673092  T
Q  174 ttaggtttggttcggacgg 192  Q
    ||  | |||||| ||||||    
T  30673093 ttgtggttggtttggacgg 30673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 36919133 - 36919270
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||||||  || ||| ||||||||| | |||||| ||||| |||| | |||||  |  |||| ||||||| | || |||||||||||||| |     
T  36919133 tttgggtatgggttaaggatggatacctatatccacgttactcgtcctatacacatgttttaaagtcggggaaaactcaaactcatacccaaacccagtt 36919232  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||| || | |||||||||||||||  ||||||||||||    
T  36919233 aaagcgagaaaaacccgtcaaattgagtttggttcgga 36919270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 47103748 - 47103856
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| | ||||||||| ||| ||||||| ||| || || || ||||||  | ||||||||  ||||||| ||    
T  47103748 tttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatacaaaaacccagtc 47103847  T
Q  152 aaaacgggg 160  Q
    ||| |||||    
T  47103848 aaatcgggg 47103856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 31782623 - 31782698
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||| ||||||||||||||| ||||| ||||||||| || || ||||||| ||| || ||||| ||||||    
T  31782623 tttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaac 31782698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Complemental strand, 1724308 - 1724219
Alignment:
Q  98 ccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||| ||||| || |||||  |||||  | ||||||||||||||||| ||||| |||||||||| |||||||||  |||||||||||    
T  1724308 ccatacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaa-cggggaaaacacgtcaaattgagtttggttcgg 1724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 31416008 - 31415894
Alignment:
Q  60 tgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggg 159  Q
    |||||| ||||||||||| ||||| || |||| || |||| ||||||| ||| || |||||||||||   | ||  ||||| ||||||| ||||| ||||    
T  31416008 tgggttcggggtgggtacatatatccctgttatccatcccgtacccgtattttgaaatcggagaaaatccaaacttatacctaaacccagtcaaatcggg 31415909  T
Q  160 gaaaacccgtcaaat 174  Q
    |||||||||| ||||    
T  31415908 gaaaacccgttaaat 31415894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 222
Target Start/End: Original strand, 425855 - 425943
Alignment:
Q  134 ccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgc 222  Q
    ||||| ||||||||| |||||||||| |||||||  ||||||||||| ||||||||||| |||||| ||||||   |||||||| |||||    
T  425855 ccatatccaaacccagtcaaaacgggaaaaacccc-caaattaggttaggttcggacggataaccacgagtatgagttttgttgtcatgc 425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 126
Target Start/End: Original strand, 36306816 - 36306869
Alignment:
Q  73 ggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaa 126  Q
    ||||||||||| ||||||| ||||| ||||||||||||| || |||||||||||    
T  36306816 ggtacctatatccccgttaaccgtctcatacccgtgttttgaaatcggagaaaa 36306869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 3737789 - 3737845
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    ||||||||||| ||| ||||||| ||||  | |||||||||||||||||||||||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttt 3737845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 9929252 - 9929160
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaa 144  Q
    |||||||| | ||| ||||||||||||||||| |  ||||||||| | |||||||| ||| || ||| |  |||||| |||||||||||||||    
T  9929252 tttgggtaagagttcggggtgggtacctatatccatgttacccgtactatacccgtattttgaaatcaggaaaaactcatacccatacccaaa 9929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 12075705 - 12075594
Alignment:
Q  63 gtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaa 162  Q
    ||||||||||||||| ||| | ||  ||||| ||| | ||||||||||| || || ||| |||||| | || ||||||||||||| |||||| | || ||    
T  12075705 gtttggggtgggtacatatctccctattacctgtcacgtacccgtgttttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagc-ggaaa 12075607  T
Q  163 aacccgtcaaatt 175  Q
    |||||||||||||    
T  12075606 aacccgtcaaatt 12075594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 12505577 - 12505489
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccataccc-aaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||| || ||||| ||||||  | || ||||||| ||||||||||||| ||| ||||||||||||| |||  ||||||||||    
T  12505577 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaatttaaatttggttcgg 12505489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 21544589 - 21544657
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    |||||||||||||| ||||||||||| ||||| ||| ||||| ||||| ||||||| ||| || |||||    
T  21544589 tttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgg 21544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 568489 - 568536
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    ||||||||| | ||||| ||||||||||||||||||||||| ||||||    
T  568489 acccaaacctagtcaaatcggggaaaacccgtcaaattagggttggtt 568536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 30266415 - 30266360
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgt 107  Q
    |||||||||||||| ||||||| ||| ||||| ||||||||||||||  |||||||    
T  30266415 tttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgt 30266360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 30285773 - 30285828
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgt 107  Q
    |||||||||||||| ||||||| ||| ||||| ||||||||||||||  |||||||    
T  30285773 tttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgt 30285828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 9230292 - 9230350
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 110  Q
    ||||| |||| ||||||| ||| ||||||||||| ||||| |||||| |||||||||||    
T  9230292 tttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgtt 9230350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 31918691 - 31918649
Alignment:
Q  16 ataacagaacatatcaacataaagtagtt-ttttacatttggg 57  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  31918691 ataacataacatatcaacataaagtagtttttttacatttggg 31918649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 53906384 - 53906346
Alignment:
Q  58 tatgggtttggggtgggtacctatatacccgttacccgt 96  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  53906384 tatgggttcggggtgggtacctatatacctgttacccgt 53906346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 8843874 - 8843753
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    ||||||||| |||||| |||| ||||||||||  ||| ||||||  | |||||  |||| | | || |||| ||||||||| ||||| |  |||||||||    
T  8843874 gggtgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaaccc 8843775  T
Q  168 gtcaaattaggtttggttcgga 189  Q
    ||||||||   |||||||||||    
T  8843774 gtcaaatttaatttggttcgga 8843753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 8856838 - 8856717
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    ||||||||| |||||| |||| ||||||||||  ||| ||||||  | |||||  |||| | | || |||| ||||||||| ||||| |  |||||||||    
T  8856838 gggtgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaacacatatccaaacccagtcaaagcacggaaaaccc 8856739  T
Q  168 gtcaaattaggtttggttcgga 189  Q
    ||||||||   |||||||||||    
T  8856738 gtcaaatttaatttggttcgga 8856717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 47550485 - 47550444
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  47550485 ataacataacatatcaacataaaataattttttacatttggg 47550444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 50375925 - 50375864
Alignment:
Q  132 acccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacggt 193  Q
    |||||| |||||||||||||||| |||| |||| ||||| ||||  ||||||||||| ||||    
T  50375925 acccatgcccaaacccaatcaaagcgggaaaaatccgtcgaattgagtttggttcgggcggt 50375864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 9280899 - 9280847
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    ||||| ||||||| ||| || ||||||||| ||||||| ||||||||||||||    
T  9280899 acccacacccaattaaagcgaggaaaacccatcaaattgggtttggttcggac 9280847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 10574504 - 10574452
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||||||| ||| |||| |||||| ||||| ||||||||||||||| ||||    
T  10574504 tttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacc 10574452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 20819633 - 20819589
Alignment:
Q  141 caaacccaatcaaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||||||||||||||||| |||||||||| |||| ||| ||||||    
T  20819633 caaacccaatcaaaacggagaaaacccgttaaatcagggttggtt 20819589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 29527896 - 29527932
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaat 174  Q
    |||||||||| |||||| |||||||||||||||||||    
T  29527896 acccaaaccctatcaaagcggggaaaacccgtcaaat 29527932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 39188598 - 39188650
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    ||||||||||||||||||| |  ||||||| ||||||| ||||| ||||||||    
T  39188598 acccaaacccaatcaaaacagaaaaaacccatcaaattgggtttagttcggac 39188650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 21702621 - 21702840
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           |||||||| ||||||||||||||||||||||||||||||||||||||    
T  21702621 ataacataacatatcaacataaagtagttttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 21702720  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  |||| |||||||||||||| |||||||||| |||| |||||||||| |||||||||||| | |||||||| |  |    
T  21702721 cgtgtttcgagatcggggaaaacccatactcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgggcgggtaaccacggat 21702820  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  21702821 atgggttttgttgccatgcc 21702840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 30650639 - 30650776
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||||||||| ||||||| |    
T  30650639 atttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcatacccatacctaaacccagt 30650738  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  30650739 caaaacggggaaaacccgtcaaattgggtttggttcgg 30650776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 35074479 - 35074651
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||  ||||||||||||||||||| ||    
T  35074479 tttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccatacccatacccaaacccagtc 35074578  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||||| |||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  35074579 aaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgcc 35074651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 10072477 - 10072647
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||  ||||||||||||||||||| ||||    
T  10072477 tgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaa 10072576  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||| |||||||||||| | |||||||  | |||| | |||||||||||||||    
T  10072577 aacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcc 10072647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 16866131 - 16866314
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||           |||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16866131 ataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacc 16866230  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||| |||||||| ||||||  ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  16866231 cgtgttttgagatcggggaaaacccatacccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgg 16866314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 24753137 - 24753344
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttgggtatgggtttgggg-tgggtacctatatacccgttacccgtcccatacccgtgtttcga 114  Q
    |||||| |||||||||||||||| || ||||||||||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  24753137 ataacataacatatcaacataaaataattttttacatttggg-acgggtttgggtatgggtacctatatacccgttacccgtcccatacccgtgttttga 24753235  T
Q  115 gatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttg 213  Q
    |||||| ||||||  ||||||||| ||||||||| ||||||||| ||||| ||||||||||   |||||||||||| |||||||| | |||| | |||||    
T  24753236 gatcgg-gaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattgaatttggttcggacgggtaaccacgggtatgggttttg 24753334  T
Q  214 ttgccatgcc 223  Q
    ||||||||||    
T  24753335 ttgccatgcc 24753344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 45885896 - 45885677
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||||||| |||||||||||||||||||  |||||||||||||||||    
T  45885896 ataacataacatatcaacataaagtaattttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacc 45885797  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||| |  |||||||| | ||    
T  45885796 cgtgttttgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcgagcgggtaaccacgggt 45885697  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  45885696 atgggttttgttgccatgcc 45885677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 18125359 - 18125176
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||||           |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  18125359 ataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacc 18125260  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||  |||||  |||| ||||| |||||||| |||||||||||||||||||||||||| | ||||||||||    
T  18125259 cgtgtttcgagatcgggaaaaacccatactcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgg 18125176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 7780017 - 7780189
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||    
T  7780017 tttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 7780116  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga-cggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||| ||||||||||  ||||||||||||  |||||||| | |||| | |||||||||||||||    
T  7780117 aaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatgcc 7780189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 17851816 - 17852033
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttg-----------ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||||||||||||||||||||           |||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  17851816 ataacataacatatcaacataaagtagttttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacc 17851915  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||   ||||||| ||||||  ||||||||||||||||||| ||||||||| ||||| || ||||||| |||||||||||| | ||||||||  |||    
T  17851916 cgtgtt--aagatcggggaaaacccatacccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagt 17852013  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  17852014 atgggttttgttgccatgcc 17852033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 18825956 - 18825778
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttataccca------tacccaaac 145  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||  | |||||       ||||||||    
T  18825956 tttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaac 18825857  T
Q  146 ccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||| |||||| | |||| | |||||||||||||||    
T  18825856 ccagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggttaaccatgggtatgggttttgttgccatgcc 18825778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 17885476 - 17885646
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||| |||||  | ||||| ||||||  |||||||||  |||||||| ||||    
T  17885476 tgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaacccatacccatattcaaacccagtcaa 17885575  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||| |||||||||||| | |||||||| | |||| | |||||||||||||||    
T  17885576 aacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgccatgcc 17885646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 52 - 220
Target Start/End: Original strand, 16079022 - 16079191
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||  |||||||||| || ||    
T  16079022 tttgggtataggtttggggtgggcacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccaaacttatacccaaactcagtc 16079121  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccat 220  Q
    ||||| |  ||||| |||||||||||||||| ||||| | |||||||| |||||| | ||||||||||||    
T  16079122 aaaaccgaaaaaactcgtcaaattaggtttgcttcgggcgggtaaccacgagtatgggttttgttgccat 16079191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 39456089 - 39455963
Alignment:
Q  62 ggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacgggga 161  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||  ||| ||||||||||||||| ||||||||||||    
T  39456089 ggttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatatccatacccaaacccagtcaaaacgggga 39455990  T
Q  162 aaacccgtcaaattaggtttggttcgg 188  Q
    |||| ||||||||| ||||||||||||    
T  39455989 aaactcgtcaaattgggtttggttcgg 39455963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 27850410 - 27850280
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| || ||||| ||||      ||||||||||||||||||||    
T  27850410 tttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaa------acccatacccaaacccaatc 27850317  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  27850316 aaaacggggaaaaaccgtcaaattgggtttggttcgg 27850280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 45380120 - 45380255
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||  |||||  ||||||||| ||||||||| ||||||    
T  45380120 ggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccatacccatatccaaacccagtcaaaa 45380219  T
Q  156 cggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    | ||||||| |||||||||| ||||||||||||||||    
T  45380220 cagggaaaa-ccgtcaaattgggtttggttcggacgg 45380255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 57 - 223
Target Start/End: Complemental strand, 3227025 - 3226858
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||||||||| || ||||| ||||||  |||||||||| ||||| || | |||||    
T  3227025 gtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatactcaaactcagttaaaac 3226926  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    | |||||| |||||||||| |||||||||||||| |||||||    |||| |||||||||||||||||    
T  3226925 gaggaaaatccgtcaaattgggtttggttcggacgggtaaccgcatgtatggattttgttgccatgcc 3226858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 12980386 - 12980520
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||| || ||||| ||||||  | ||||||||||||||||| ||    
T  12980386 tttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaacccagtc 12980485  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    |||| ||||||||||||| |||||  |||||||||    
T  12980486 aaaatggggaaaacccgttaaattgagtttggttc 12980520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 25905638 - 25905809
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| ||||||| ||||||| |||||||||||||||||||||| |||||| ||||| || ||||||  ||||||||||||||||||| ||    
T  25905638 tttgggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagtc 25905736  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||| |||||||||| |||||||| ||||| ||||| |  |||||||| | |||| | |||||||||||||||    
T  25905737 aaaaaggggaaaacctgtcaaattgggtttagttcgagcgggtaaccacgggtatgggttttgttgccatgcc 25905809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 56 - 223
Target Start/End: Original strand, 38152900 - 38153067
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| |||||||||||||||||| |||||| |||| |||||||| ||||| || ||||| ||||||  ||||||||||||||||||| ||||||    
T  38152900 ggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaa 38152999  T
Q  156 cggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    | ||||||| ||||||||||  ||||||||||| | |||||||  | |||||| |||||||||||||||    
T  38153000 c-gggaaaatccgtcaaattgagtttggttcgggcgggtaaccgtgggtatagtttttgttgccatgcc 38153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 39317006 - 39317176
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| |||  || ||| ||| |||||||||| |||||||||||||||||||||| || ||||  ||||||| |||| |||| ||||||||| ||||    
T  39317006 tgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcatactcatatccaaacccagtcaa 39317105  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||||||||  ||||||||||| ||| |||||  ||||||  ||||||||||||||||    
T  39317106 aacggggaaaacccgtcaaattgagtttggttcgggcggataaccgcgagtatgaattttgttgccatgcc 39317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 43507458 - 43507594
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||||||| ||||| || ||||| ||||||  ||||  ||||||||||||| ||||||    
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaa 43507557  T
Q  156 cggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||||||||||| ||||||| |||||||||| |||||    
T  43507558 cggggaaaacccatcaaattgggtttggttcagacgg 43507594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 5377093 - 5377228
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| || ||||| ||||||  | || ||||| ||| ||||||    
T  5377093 atttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaat 5377192  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    ||||||||| |||| |||| ||||||| ||||||||    
T  5377193 caaaacgggaaaaatccgttaaattagatttggttc 5377228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 37182305 - 37182419
Alignment:
Q  74 gtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaa 173  Q
    ||||||||||||||| |||||||||||||||||||||| ||  |||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||    
T  37182305 gtacctatatacccgctacccgtcccatacccgtgttttgaattcggagaaaacccatactcatacccaaacccagtcaaaacggggaaaacccgtcaaa 37182404  T
Q  174 ttaggtttggttcgg 188  Q
    ||  ||||| |||||    
T  37182405 ttgagtttgattcgg 37182419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 44734480 - 44734271
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttc 112  Q
    |||||||||||||||||| |||||||||||||||           |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||     
T  44734480 acatatcaacataaagtaattttttacatttgggacggatatgtgtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgtttt 44734381  T
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattt 211  Q
    || ||||   |||||  |||| ||| |||||||||| ||||||  |||||||||||||||||| |||||||||||| | |||||||  ||||||   |||    
T  44734380 gaaatcgagaaaaacacatacacattcccaaacccagtcaaaa--gggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttt 44734283  T
Q  212 tgttgccatgcc 223  Q
    ||||||||||||    
T  44734282 tgttgccatgcc 44734271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 38139876 - 38139740
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||| |||||||| ||||||||||| ||||||| | ||||||||||||||| ||||||| || || || ||||||  ||||||||| ||||||||| ||    
T  38139876 tttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccatacccatatccaaacccagtc 38139777  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||| || ||||||| ||||||||||||    
T  38139776 aaaacggggaaaatccatcaaattgggtttggttcgg 38139740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 3157092 - 3157227
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| |||| || |||||||||||||| ||||||| ||||||||||||| | ||| || ||||| |||||| || ||||||||||||||| | ||    
T  3157092 tttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaagtc 3157191  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||| ||||||||| ||| |||||||||||||||||||    
T  3157192 aaagcggggaaaa-ccgacaaattaggtttggttcgg 3157227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 37579271 - 37579406
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgt-cccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||||||| |||| |||||||||||||||||||||||||||| | |||||  ||||||||||| |||||  ||||   | ||||||||||||||| | |    
T  37579271 tttgggtataggttcggggtgggtacctatatacccgttacccttacccat--ccgtgtttcgaaatcgggaaaaatccaaacccatacccaaacctagt 37579368  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  37579369 caaaacggggaaaacccgtctaattgggtttggttcgg 37579406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 185
Target Start/End: Complemental strand, 2630657 - 2630525
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||  | ||||| ||||||  | ||||||||||||||||| |     
T  2630657 tttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgttt-taaatcggggaaaacccaaacccatacccaaacccagta 2630559  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||| ||| ||||| ||||||||| |||||||||    
T  2630558 aaaatgggtaaaacacgtcaaattgggtttggtt 2630525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 45708945 - 45708843
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||      ||||||||| ||||||| ||||||    
T  45708945 ggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcggagaaa------acccataccaaaacccagtcaaaa 45708852  T
Q  156 cggggaaaa 164  Q
    || ||||||    
T  45708851 cgaggaaaa 45708843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 174
Target Start/End: Complemental strand, 8906667 - 8906551
Alignment:
Q  58 tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacg 157  Q
    |||||||| ||||||||||| ||||  |||||||  |||| ||||| ||||||| || ||||||||||||| | ||||||||||||| ||||||||| ||    
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcg 8906568  T
Q  158 gggaaaacccgtcaaat 174  Q
    | |||||||||||||||    
T  8906567 gagaaaacccgtcaaat 8906551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 41741518 - 41741398
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||| || ||||| ||||||  |||| |||||||||| ||| | |||| ||||||||| |    
T  41741518 gggtgggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaactc 41741419  T
Q  168 gtcaaattaggtttggttcgg 188  Q
     ||||||| ||||||||||||    
T  41741418 atcaaattgggtttggttcgg 41741398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 24425405 - 24425549
Alignment:
Q  68 gggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaaccc 167  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |            |||||||||||||||||| ||||| ||    
T  24425405 gggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaatt------------caaacccaatcaaaacggagaaaatcc 24425492  T
Q  168 gtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||| |||||||||||| | |||||||| | ||||   |||||||||||||||    
T  24425493 gtcaaattgggtttggttcgggctggtaaccacgtgtatgagttttgttgccatgcc 24425549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 41103670 - 41103794
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||      ||||||||||| ||||| |||||||    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaa------acccatacccacacccagtcaaaac 41103763  T
Q  157 ggggaaaacccgtcaaattaggtttggttcg 187  Q
    ||| |||| |||||||||  | |||||||||    
T  41103764 gggaaaaatccgtcaaatcggatttggttcg 41103794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 44658503 - 44658415
Alignment:
Q  100 atacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||||||| || |||||  |||||| ||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||    
T  44658503 atacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggttcgg 44658415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 44985952 - 44985865
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgga 189  Q
    ||||||||||| || ||||||||||||  ||| ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||    
T  44985952 tacccgtgttt-gaaatcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcgga 44985865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 188
Target Start/End: Original strand, 3920547 - 3920671
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||||||||| |||||| || ||||| ||||            ||||||||||| ||    
T  3920547 tttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaa------------acccaaacccagtc 3920634  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||||| ||||||| ||||||| ||||||||||||    
T  3920635 aaaacgggaaaaacccatcaaattgggtttggttcgg 3920671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 37218047 - 37218150
Alignment:
Q  85 cccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggt 184  Q
    ||||||||||||||| |||| |||||| || || ||| |||||| | || |||||||||||||| |||||||||||||||||| |||||||  |||||||    
T  37218047 cccgttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaaaacggggaaaacccatcaaattgagtttggt 37218146  T
Q  185 tcgg 188  Q
    ||||    
T  37218147 tcgg 37218150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 44785281 - 44785170
Alignment:
Q  113 gagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattt 211  Q
    |||||||||||||||  ||||||||||||||||  | |||||||||||||||| ||||||||| |||||| ||||| | ||||||||   ||||  ||||    
T  44785281 gagatcggagaaaacccatacccatacccaaacttagtcaaaacggggaaaactcgtcaaattgggtttgattcgggcgggtaaccacatgtatgaattt 44785182  T
Q  212 tgttgccatgcc 223  Q
    ||||||||||||    
T  44785181 tgttgccatgcc 44785170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 25980002 - 25979926
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||| |||||| |||||| || ||||| ||||||    
T  25980002 atttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaaac 25979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 224
Target Start/End: Complemental strand, 37196044 - 37195920
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccag 199  Q
    |||| |||||| || ||||| |||||   ||||||||||||||||| ||||||||| ||||||| ||||||||||  |||||||| || ||| ||||||     
T  37196044 tacctgtgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaaattgagtttggtttgggcggataaccac 37195945  T
Q  200 gagtatagattttgttgccatgcca 224  Q
    | |||| |||||||||| |||||||    
T  37195944 gggtatggattttgttgtcatgcca 37195920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 26622960 - 26623019
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||| ||||||||||| ||||||||| |||||| ||||||||||||||||    
T  26622960 tttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttt 26623019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 27063346 - 27063465
Alignment:
Q  55 gggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaa 154  Q
    ||||||| ||| ||||||||||| ||||| ||||||||||||||| ||||||| ||   | ||||| ||||||  | ||||||||||||||||| |||||    
T  27063346 gggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccgagacccatacccaaacccagtcaaa 27063445  T
Q  155 acggggaaaacccgtcaaat 174  Q
      ||| |||| |||||||||    
T  27063446 ttgggaaaaatccgtcaaat 27063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 27063147 - 27063269
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| |||||| |||| ||||| ||||||| ||||||  ||||||| ||| || ||||  ||||||| | || |||||||||||||| ||    
T  27063147 tttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaaacccagtc 27063246  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| | ||||||| |||||||||    
T  27063247 aaatcagggaaaatccgtcaaat 27063269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 27896557 - 27896427
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| ||| ||||| ||| | ||||  ||||||||||||||||||||| ||||| || ||  | ||||||  | ||||||||||||||||||||||    
T  27896557 tgggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaaacccatacccaaacccaatcaa 27896458  T
Q  154 aacggggaaaacccgtcaaattaggtttggt 184  Q
    | || | ||||||| ||||||| || |||||    
T  27896457 agcgagaaaaacccatcaaattggggttggt 27896427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 22973397 - 22973505
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| | |||||||||  |||| ||| ||||||||||| ||||||| ||| || ||||  ||||||  | ||||||||||||||||| ||    
T  22973397 tttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaacccagtc 22973496  T
Q  152 aaaacgggg 160  Q
    ||| |||||    
T  22973497 aaatcgggg 22973505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 26004554 - 26004398
Alignment:
Q  56 ggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaa 155  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||||  |||| || ||||  ||||            ||||||||||| ||||||    
T  26004554 ggtatgggttcggggtgggtatctatatacctgttacccgtcccatacccaagttttgaaatcgaggaaa------------acccaaacccagtcaaaa 26004467  T
Q  156 cggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||| ||||||| |||||||  ||||||||||| | |||||||| | ||||   |||||||||||||||    
T  26004466 cgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatgcc 26004398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 42908106 - 42908003
Alignment:
Q  71 tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtc 170  Q
    ||||||| ||||| ||| ||||||||||| ||||||| ||| || ||||| ||||||  | || ||||||||||||||||||||  ||| |||| |||||    
T  42908106 tgggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaattgggaaaaaaccgtc 42908007  T
Q  171 aaat 174  Q
    ||||    
T  42908006 aaat 42908003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 43550424 - 43550373
Alignment:
Q  141 caaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  43550424 caaacccaatcaaaatggggaaaacccgtcaaattaggtttgattcagacgg 43550373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 44794111 - 44794053
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||| |||||||||||||    
T  44794111 tttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgttt 44794053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 16811739 - 16811812
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaa 126  Q
    |||||||||||||| ||| |||||| |||||||||| ||| ||||| ||||||||||||| |||||||| |||||    
T  16811739 tttgggtatgggttcggg-tgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaa 16811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 192
Target Start/End: Complemental strand, 25782992 - 25782858
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    |||| |||||| ||| ||||||||||||||||||||| ||| ||||| |||||||||||||    ||||||||||      ||||| | | |||||||||    
T  25782992 attttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataatcggagaaa------accca-aactaaacccaat 25782900  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||||||| ||||| ||| |||||  ||||||||||| ||||    
T  25782899 caaaacggagaaaatccgacaaatcgggtttggttcgcacgg 25782858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 33841092 - 33841208
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| |||||| |||| ||||  |  |||||||||||||||||||||||| || ||||| ||||||| | |  ||||| |||| ||| ||||| |    
T  33841092 gtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattcatactcaaa-ccagtcaaagc 33841190  T
Q  157 ggggaaaacccgtcaaat 174  Q
    ||| ||||||||||||||    
T  33841191 gggaaaaacccgtcaaat 33841208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 5565389 - 5565269
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||||| ||||  |||||||||| ||||||| ||||  || || ||| | ||||||  | ||| ||| ||||| ||| ||||    
T  5565389 tgggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaaacctataaccaaatccagtcaa 5565290  T
Q  154 aacggggaaaacccgtcaaat 174  Q
    | ||||||||| |||||||||    
T  5565289 agcggggaaaatccgtcaaat 5565269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 18683983 - 18684091
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| | ||||| ||| ||||| || |||||||||||| ||||||| ||| || ||||| ||||||    ||||||||||||||| | ||    
T  18683983 tttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaaacctagtc 18684082  T
Q  152 aaaacgggg 160  Q
    ||| |||||    
T  18684083 aaatcgggg 18684091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 32546201 - 32546269
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||| || ||||||| ||| || |||||    
T  32546201 tttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgg 32546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 23457156 - 23457203
Alignment:
Q  140 ccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg 187  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcg 23457203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 174
Target Start/End: Complemental strand, 30839218 - 30839095
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||| ||| ||| ||||| | ||| ||||| | |||||| |||||||||||||| ||| || ||| | ||||||| | || |||||||||||||| ||    
T  30839218 tttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccagtc 30839119  T
Q  152 aaaacgg-ggaaaacccgtcaaat 174  Q
    ||| |||  |||||||||||||||    
T  30839118 aaatcggaagaaaacccgtcaaat 30839095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 19440017 - 19439971
Alignment:
Q  141 caaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcg 187  Q
    |||||||| ||||| |||||||||||||||||||| |||||||||||    
T  19440017 caaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcg 19439971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 23533614 - 23533564
Alignment:
Q  138 acccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||| ||||| |||| ||||||||||||||| ||||||||||||    
T  23533614 acccaaacccagtcaaatcgggaaaaacccgtcaaattgggtttggttcgg 23533564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 31426017 - 31426119
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| ||| ||||||| ||| ||||| ||||||||||||| ||||||||| |||  | ||||| ||||||  | ||| ||||| ||||||| ||    
T  31426017 tttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaaccaataccaaaacccagtc 31426116  T
Q  152 aaa 154  Q
    |||    
T  31426117 aaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 10995916 - 10995843
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    |||||||||||| ||||||||||  ||||  || |||||||||||||||||||||| | || ||||| ||||||    
T  10995916 tgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaac 10995843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 187
Target Start/End: Complemental strand, 23475347 - 23475224
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |  |||||||| ||||| ||| |||||| ||||| |||||||||| || ||||| |||||           ||||||||||| ||    
T  23475347 tttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcgg-gaaaa-----------acccaaacccagtc 23475260  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcg 187  Q
    ||| ||||||||||||||||||||  ||||||||||    
T  23475259 aaagcggggaaaacccgtcaaattgagtttggttcg 23475224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 30650593 - 30650634
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  30650593 ataacataacatatcaacataaagtaattttttacatttggg 30650634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 23329012 - 23329120
Alignment:
Q  67 ggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacc 166  Q
    |||||| ||||||||||||||| ||||||||||||||   |||||  | ||| |  |||||||| || ||||||||| ||||   ||||| || ||||||    
T  23329012 ggggtgagtacctatatacccgctacccgtcccatacagatgttttaaaatcaggaaaaacttaaactcatacccaatcccagctaaaacaggaaaaacc 23329111  T
Q  167 cgtcaaatt 175  Q
    |||||||||    
T  23329112 cgtcaaatt 23329120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 29157358 - 29157413
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgt 107  Q
    |||||||| |||||| |||||| ||| ||||| ||||||||||||| |||||||||    
T  29157358 tttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgt 29157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 37196129 - 37196091
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacattt 54  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  37196129 ataacataacatatcaacataaagtaattttttacattt 37196091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 16811692 - 16811733
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| || |||||||||||||||| |||||||||||||||    
T  16811692 ataacataatatatcaacataaagtaattttttacatttggg 16811733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 44794158 - 44794117
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg 57  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  44794158 ataacataacatatcaacataaaataattttttacatttggg 44794117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 6e-53; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 23490902 - 23490683
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||| ||||||| ||||||||||||||||||           |||||||| ||||||||||||||||||||||||||||||||||||||    
T  23490902 ataacataacatatccacataaattagttttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacc 23490803  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    |||||||||||||||| ||||||  ||||||||||||||||||| ||||||| || ||||||||||||||| | |||||||||| | |||||| | ||||    
T  23490802 cgtgtttcgagatcggggaaaacccatacccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggttcgggcgggtaactatgagt 23490703  T
Q  204 atagattttgttgccatgcc 223  Q
    || | |||||||||||||||    
T  23490702 atgggttttgttgccatgcc 23490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 36187304 - 36187132
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||| ||    
T  36187304 tttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaacccagtc 36187205  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||| ||||||  ||||||||||| | |||||| | | |||| | |||||||||||||||    
T  36187204 aaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttgccatgcc 36187132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 57 - 222
Target Start/End: Complemental strand, 19572591 - 19572425
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||||  |||||  ||||||||||||||||||| ||||||     
T  19572591 gtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccatacccatacccaaacccagtcaaaat 19572492  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgc 222  Q
    |||||||||||||||||||||||||||||||| | ||||||||  ||||| | ||||||||||||||    
T  19572491 ggggaaaacccgtcaaattaggtttggttcgggcgggtaaccacaagtatgggttttgttgccatgc 19572425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 223
Target Start/End: Complemental strand, 49250897 - 49250685
Alignment:
Q  23 aacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||||||||||||||||||||||||           |||||||| | ||||| ||||||||||||| |||||||||||||||||||||||    
T  49250897 aacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttt 49250798  T
Q  112 cgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagatt 210  Q
     |||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||   |||||||||| ||| |||||| | ||||  |||    
T  49250797 tgagatcggggaaaactcatacccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgggcggataaccacgggtatgaatt 49250698  T
Q  211 ttgttgccatgcc 223  Q
    |||||| ||||||    
T  49250697 ttgttgtcatgcc 49250685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 24 - 223
Target Start/End: Original strand, 5181011 - 5181216
Alignment:
Q  24 acatatcaacataaagtagttttttacatttgg-----gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatc 118  Q
    ||||||||||||||| || ||||||||||||||     ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||    
T  5181011 acatatcaacataaaataattttttacatttggaacgggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatc 5181110  T
Q  119 ggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgc 217  Q
    || ||||||  ||||||||||| ||||||| |||||| |||||||||||||||||||   |||||||||| | |||||||  | |||| | |||||||||    
T  5181111 ggggaaaacccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggttcgggcgggtaaccgcgggtatgggttttgttgc 5181210  T
Q  218 catgcc 223  Q
    ||||||    
T  5181211 catgcc 5181216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 27 - 188
Target Start/End: Original strand, 24710827 - 24710988
Alignment:
Q  27 tatcaacataaagtagttttttacatttgggtatgggtttgggg-tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaa 125  Q
    ||||||||||||||| ||||||||||||||| | ||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  24710827 tatcaacataaagtaattttttacatttggg-acgggtttgagtatgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaa 24710925  T
Q  126 acttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||  |||| |||| ||||||||| ||||||||||||||||||||||||||   ||||||||||    
T  24710926 acccatactcatatccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgg 24710988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 24236892 - 24236673
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| |||||||||||||||| || |||||||||||||||           |||||||| |||||||||||||||||||||||| ||||| |||||||    
T  24236892 ataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacc 24236793  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagt 203  Q
    ||||||| |||||||| ||||||  ||||||||||| ||||||| |||||||||| |||||||||||||||  ||||||||||| | |||||||| | ||    
T  24236792 cgtgttttgagatcggggaaaacccatacccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggt 24236693  T
Q  204 atagattttgttgccatgcc 223  Q
    ||   |||||||||||||||    
T  24236692 atgagttttgttgccatgcc 24236673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 51421863 - 51422035
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||||||||||||||||| ||||||||  |||||  ||||||||||||||||||| ||    
T  51421863 tttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaacccagtc 51421962  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||| ||||||||||| ||||||| |||||||||||| | |||||||| |  ||| |||||| ||||||||||    
T  51421963 aaaatggggaaaacccatcaaattgggtttggttcgggcgggtaaccacggatatggattttattgccatgcc 51422035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 29936421 - 29936599
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaa-- 149  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||  |||||||||| || ||||||      
T  29936421 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccatacccatactcatacccaaac 29936520  T
Q  150 ----tcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
        |||||||||||||||||||||||||| |||||||||||| | |||||||| | |||| | |||||||| ||||||    
T  29936521 ttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatgcc 29936599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 34611078 - 34611250
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||| |||||||||||| ||||||  ||||||||||||||||| ||||||||  |||||  |||||||||||||||  |||||    
T  34611078 tttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatacccatacccaaattcaatc 34611177  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||||||||||||||||||||||| | |||||||| ||  |||||||| | |||| |||||||||| ||||||    
T  34611178 aaaacggggaaaacccgtcaaattggatttggttcaggcgggtaaccacgggtatggattttgttgtcatgcc 34611250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 187
Target Start/End: Original strand, 16408953 - 16409082
Alignment:
Q  58 tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacg 157  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||| || || || ||||||  ||||||||||||||||||| ||||||||    
T  16408953 tatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaacccagtcaaaacg 16409052  T
Q  158 gggaaaacccgtcaaattaggtttggttcg 187  Q
    |||||||||||||||||| |||||| ||||    
T  16409053 gggaaaacccgtcaaattgggtttgattcg 16409082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 42439801 - 42439582
Alignment:
Q  16 ataacagaacatatcaacataaagtagttttttacatttggg-----------tatgggtttggggtgggtacctatatacccgttacccgtcccatacc 104  Q
    |||||| ||||||||||||||||||| |||||||||||||||           |||||||| |||||||||||||||||||||||||| |||||||||||    
T  42439801 ataacataacatatcaacataaagtaattttttacatttgggatgagtttggatatgggttcggggtgggtacctatatacccgttactcgtcccatacc 42439702  T
Q  105 cgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagt 203  Q
    | ||||| ||||||||| |||| | |||||||||||||||| || |||||| ||  ||||   ||||||||  ||||||||||| ||| |||||| || |    
T  42439701 catgttttgagatcggaaaaaattcatacccatacccaaactcagtcaaaatggaaaaaatttgtcaaattgagtttggttcgggcggataaccacgaat 42439602  T
Q  204 atagattttgttgccatgcc 223  Q
    || |||||||||||||||||    
T  42439601 atggattttgttgccatgcc 42439582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 28297939 - 28298035
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaaccca 148  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||    
T  28297939 tttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcatacccatacccataccca 28298035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 54 - 223
Target Start/End: Original strand, 17134954 - 17135124
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||  ||||||| ||||||||||| ||||    
T  17134954 tgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaa 17135053  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||| | ||||| |||||||||| |||||||||||| | |||||||  | |||| | |||||||||||||||    
T  17135054 aacagagaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatgcc 17135124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 42707953 - 42707752
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatc 118  Q
    ||||||||||||||| || |||||||||||||||     |||||||| ||| || |||| ||||| ||||||||||||||||||||||||||| || |||    
T  42707953 acatatcaacataaaataattttttacatttgggacgggtatgggttcggg-tgagtacttatattcccgttacccgtcccatacccgtgttttgaaatc 42707855  T
Q  119 ggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgc 217  Q
    |||||||||| |||| |||||||||||||| |||||| ||| |||| |||||||||||  ||| ||| |||||| |||||| || ||| | |||||||||    
T  42707854 ggagaaaactcatactcatacccaaacccagtcaaaatgggaaaaatccgtcaaattaaatttagtttggacggataaccacgattatgggttttgttgc 42707755  T
Q  218 cat 220  Q
    |||    
T  42707754 cat 42707752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 44615559 - 44615389
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  | ||| | ||||||  | || |||||||||||||| ||    
T  44615559 tttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtc 44615460  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggt-tcggacggtaaccaggagtatagattttgttgccatg 221  Q
    |||||||| |||||||||||||||  ||||||| | ||  |||||||| | |||| | |||||||||||||    
T  44615459 aaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatg 44615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 44793010 - 44793180
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||  | ||| | ||||||  | || |||||||||||||| ||    
T  44793010 tttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaacccagtc 44793109  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggt-tcggacggtaaccaggagtatagattttgttgccatg 221  Q
    |||||||| |||||||||||||||  ||||||| | ||  |||||||| | |||| | |||||||||||||    
T  44793110 aaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatg 44793180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 54 - 223
Target Start/End: Complemental strand, 45866267 - 45866098
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||| ||||||||||||||||||||||| | ||||| ||| ||||||||||||| || ||||| ||||||  ||||||||||||||||| | ||||    
T  45866267 tgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccatacccatacccaaacctagtcaa 45866168  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    || || ||||||||||||| |||||||||| |||| | |||||||  |||||| | |||||||||||||||    
T  45866167 aa-ggagaaaacccgtcaatttaggtttggctcgggcgggtaaccgcgagtatgggttttgttgccatgcc 45866098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 24 - 223
Target Start/End: Complemental strand, 50426778 - 50426567
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg-----tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatc 118  Q
    ||||||||||||||||||  ||||||||||||||     |||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| || |||    
T  50426778 acatatcaacataaagtaaatttttacatttgggacgggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatc 50426679  T
Q  119 ggagaaaacttatacccatacccaaacccaa------tcaaaacggggaaaacccgtcaaattaggtttggttcg-gacggtaaccaggagtatagattt 211  Q
     | |||| |  ||||||| ||||||||||||      ||||||||| ||||||| || ||||| ||||||||||| | ||||||||  | |||| |||||    
T  50426678 agggaaagcccatacccaaacccaaacccaaacccagtcaaaacggagaaaacctgttaaattgggtttggttcgagccggtaaccgcgggtatggattt 50426579  T
Q  212 tgttgccatgcc 223  Q
    ||||||||||||    
T  50426578 tgttgccatgcc 50426567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 34673366 - 34673230
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| || || ||  |||||  | ||||||||||||||||| |     
T  34673366 tttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccagtt 34673267  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||| |||||||| |||| ||||| ||||||||||||    
T  34673266 aaaatggggaaaatccgttaaattgggtttggttcgg 34673230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 23968621 - 23968756
Alignment:
Q  89 ttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||||||||| || | ||| ||||||  |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgg 23968720  T
Q  189 ac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
     | |||||||  | |||| | |||||||||||||||    
T  23968721 gcgggtaaccgcgggtatgggttttgttgccatgcc 23968756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 188
Target Start/End: Original strand, 39616269 - 39616433
Alignment:
Q  24 acatatcaacataaagtagttttttacatttgggtatgggtttgggg-tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggag 122  Q
    ||||||||||||||| || ||||||||||||||| | |||| ||||  ||||| |||||||||  ||||||||||| |||||||||||| || || || |    
T  39616269 acatatcaacataaaataattttttacatttggg-acgggtatgggtatgggtgcctatatacttgttacccgtcctatacccgtgttttgaaatagggg 39616367  T
Q  123 aaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||  |||| ||||||||||| || |||||||||||||||| |||||||||  |||||||||||    
T  39616368 aaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaaattgagtttggttcgg 39616433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 9982974 - 9982838
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||||| |||||||| |||||| ||||||||| || || || ||||| | | || |||||||||||||| ||    
T  9982974 tttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaaactcatacccaaacccagtc 9982875  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||| ||||| || ||||||| | ||||||||||    
T  9982874 aaaacggagaaaatccatcaaattggatttggttcgg 9982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 57 - 192
Target Start/End: Complemental strand, 40087542 - 40087408
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||| ||| ||||||||||||||||| |||||||| | ||||||||| |||||| || ||||| ||||||| |||||||||||||||| || |||||||    
T  40087542 gtatgagttcggggtgggtacctatattcccgttactcatcccatacctgtgttttga-atcggggaaaactcatacccatacccaaactcagtcaaaac 40087444  T
Q  157 ggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||||||| ||||||||||   |||||||| |||||    
T  40087443 ggggaaaatccgtcaaattgaatttggttcagacgg 40087408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 12495015 - 12495149
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||| || |||||  |||||  | ||||||||| ||||||| ||    
T  12495015 tttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaacccagtc 12495114  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttc 186  Q
    |||  |||||||| |||||||||| | ||||||||    
T  12495115 aaagtggggaaaatccgtcaaattggatttggttc 12495149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 54 - 188
Target Start/End: Complemental strand, 18354162 - 18354028
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    ||||||| |||| |||||||| || ||||||||||||||||||||||||||| ||||| || ||||| ||||||  |||||||||  |||| ||| ||||    
T  18354162 tgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatacccatattcaaatccagtcaa 18354063  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    |||||| |||||||||||||||   ||||||||||    
T  18354062 aacgggaaaaacccgtcaaattgaatttggttcgg 18354028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 29871369 - 29871197
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| |||  ||||||||||||||||||| |||||| ||||||||||| ||||| || ||||||||||||  | || |||||||||||  | ||    
T  29871369 tttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaacccaaactcatacccaaacttagtc 29871270  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcca 224  Q
    |||||| |||||||||||||||||  |||||| ||||| || |||||| ||||||   |||||||| |||||||    
T  29871269 aaaacgaggaaaacccgtcaaattgagtttgg-tcggatggataaccacgagtatgagttttgttgtcatgcca 29871197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 35936940 - 35936749
Alignment:
Q  24 acatatcaacataaagtagttttttacatttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggaga 123  Q
    |||||||||||||||||| |||| ||||||   | | ||||||||||||||||||||||||||||||| ||||||||||| |||| || || ||||| ||    
T  35936940 acatatcaacataaagtaattttctacattcatg-acgggtttggggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcgggga 35936842  T
Q  124 aaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgtt 215  Q
    ||||  | || |||||||||||| | |||||| | | ||||||||||| |||   |||||||||||| |||||| | | |||| |||||||||    
T  35936841 aaacccaaactcatacccaaaccaagtcaaaatgagaaaaacccgtcagattgaatttggttcggacaggtaactacgggtatggattttgtt 35936749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 10778646 - 10778528
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaac 156  Q
    ||||||||| ||||||| || |||||  ||||||||||||||||||||||||||| || |||||  |||||||| || |||||||||||||| ||||| |    
T  10778646 gtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaactcatacccaaacccagtcaaagc 10778547  T
Q  157 ggggaaaacccgtcaaatt 175  Q
    ||  |||||||||||||||    
T  10778546 ggaaaaaacccgtcaaatt 10778528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 20774651 - 20774743
Alignment:
Q  132 acccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| | |||||||| |||||| | |||||||||||||||    
T  20774651 acccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatgcc 20774743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 136
Target Start/End: Complemental strand, 3628064 - 3627985
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttataccca 136  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || ||||| |||||| ||||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacctataccca 3627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 16433248 - 16433091
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||   ||||||||||| |||||||||||||||||||||||||| || |||||||||||||            |||||||||||    
T  16433248 tttgggtatgggttcgggg---gtacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaact------------caaacccaatc 16433164  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcgga-cggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||| |||||||| ||||||||||  ||||||||||||  |||||||| |  ||||| |||| ||||||||||    
T  16433163 aaaatggggaaaatccgtcaaattgagtttggttcggatgggtaaccacggatataggttttattgccatgcc 16433091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 13390456 - 13390573
Alignment:
Q  106 gtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagta 204  Q
    |||||| || ||||| ||||| | ||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||| | |||||||  | |||    
T  13390456 gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaacgggg-aaacccgtcaaattgggtttggttcgggcgggtaaccgtgggta 13390554  T
Q  205 tagattttgttgccatgcc 223  Q
    | | |||||||||||||||    
T  13390555 tgggttttgttgccatgcc 13390573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 19003753 - 19003628
Alignment:
Q  48 tacatttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaaccc 147  Q
    |||||| ||||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||| ||| |  ||||| ||||||    |||||||||||||||     
T  19003753 tacattcgggta-gggtttggggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacct 19003655  T
Q  148 aatcaaaacggggaaaacccgtcaaat 174  Q
    | ||||| |||||||||||||||||||    
T  19003654 agtcaaatcggggaaaacccgtcaaat 19003628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 23058471 - 23058573
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| | ||| ||  ||| || ||||||||||||| | |||||||| |||||||| ||    
T  23058471 tttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaacccagtc 23058570  T
Q  152 aaa 154  Q
    |||    
T  23058571 aaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 13798255 - 13798383
Alignment:
Q  64 tttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaa 163  Q
    |||||||||| ||  ||||| | |||||||| || ||||||||||||| || |||||  |||||  | || |||||||||||||| ||| | ||||||||    
T  13798255 tttggggtggataaatatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccagtcataccggggaaa 13798354  T
Q  164 acccgtcaaattaggtttggttcggacgg 192  Q
    |||||| ||||| |||||||||| |||||    
T  13798355 acccgttaaattgggtttggttcagacgg 13798383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 33293596 - 33293509
Alignment:
Q  71 tgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacgg 158  Q
    ||||| ||||||| ||| ||||||||||||||||||||||| || |||||  |||||  | || ||||||||||||||||||||||||    
T  33293596 tgggttcctatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaaacgg 33293509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 34085242 - 34085361
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| ||||||||||| ||||  |||||||||| |||||||| ||||||| || |||||  |||||  | || |||| || |||||| ||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  154 aacggggaaaacccgtcaaa 173  Q
    | ||| ||||||||||||||    
T  34085342 agcggagaaaacccgtcaaa 34085361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 34060143 - 34060025
Alignment:
Q  24 acatatcaacataaagtagtttttt-acatttggg-----tatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagat 117  Q
    |||||||||||||||||| |||||| ||| |||||     |||||||| || ||||||||||||||||| |||| ||||| ||||||||||||| || ||    
T  34060143 acatatcaacataaagtaatttttttacaattgggacgggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaat 34060044  T
Q  118 cggagaaaacttataccca 136  Q
    ||  ||||||| |||||||    
T  34060043 cgaggaaaactcataccca 34060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 48125767 - 48125708
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    |||||||||||||| ||||||| ||||||||| | ||||||||||||| |||||||||||    
T  48125767 tttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttt 48125708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 13020646 - 13020736
Alignment:
Q  100 atacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    |||| ||||||| || ||||| ||||||  ||||||||| ||||||||| |||| |||| |||||||||||| |||  |||||||||||||    
T  13020646 atactcgtgttttgaaatcggggaaaacccatacccataaccaaacccagtcaagacggagaaaacccgtcagattgagtttggttcggac 13020736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 17092041 - 17091939
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||| ||||||| |||||| || |||||||||||||||| ||||||||||| |||||   | ||||| ||||||| |||| |||| |||||| || ||||    
T  17092041 tgggcatgggttcggggtgagtgcctatatacccgttacgcgtcccatacctgtgttataaaatcggggaaaactcatactcatatccaaactcagtcaa 17091942  T
Q  154 aac 156  Q
    |||    
T  17091941 aac 17091939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 2514850 - 2514903
Alignment:
Q  139 cccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||| ||||||    
T  2514850 cccaaacccaatcaaaacggggaaaacccatcaagttgggtttggtttggacgg 2514903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 34059154 - 34059060
Alignment:
Q  130 atacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcggacgg-taaccaggagtatagattttgttgccatgcc 223  Q
    ||||||||||||||| | | |||||||||| | |||||||||||||   |||||||||||||| |||||  | |||| | |||||||||||||||    
T  34059154 atacccatacccaaatctagtcaaaacgggaataacccgtcaaattgaatttggttcggacggataaccgtgggtatgggttttgttgccatgcc 34059060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 44632208 - 44632150
Alignment:
Q  69 ggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaac 127  Q
    ||||| |||| ||| ||| |||||||||||||||||||||||| || ||||||||||||    
T  44632208 ggtggatacccatacacctgttacccgtcccatacccgtgttttgaaatcggagaaaac 44632150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 49741091 - 49741054
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgt 89  Q
    |||||||||||||| |||||||||||||||||||||||    
T  49741091 tttgggtatgggttcggggtgggtacctatatacccgt 49741054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 16237388 - 16237248
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| |||||  |||| ||||| | ||||||||||||| ||||||| ||| || ||||| ||||||  | |  |||| |||||| || ||    
T  16237388 tttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaattcatatccaaactcagtc 16237289  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacgg 192  Q
    |||  || |||| ||| |||||| ||| |||||| ||||||    
T  16237288 aaattggagaaagcccatcaaatcagggttggtttggacgg 16237248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 23966883 - 23966919
Alignment:
Q  57 gtatgggtttggggtgggtacctatatacccgttacc 93  Q
    ||||||||| |||||||||||||||||||||||||||    
T  23966883 gtatgggttcggggtgggtacctatatacccgttacc 23966919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 223
Target Start/End: Complemental strand, 35069973 - 35069802
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||||||| ||||||||||| ||||| || ||||||||||   ||||||| ||  || ||||| ||||||| | || |||||||||| ||| ||    
T  35069973 tttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactcatacccaaatccagtc 35069874  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggttcggacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |||  || ||||  |||||||||  || |||||| || ||||| ||| |   || ||||||||| |||||||    
T  35069873 aaattggagaaactccgtcaaatcggggttggtttgggcggtatccatggacatggattttgttaccatgcc 35069802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 20774590 - 20774632
Alignment:
Q  16 ataacagaacatatcaacataaagtag-ttttttacatttggg 57  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  20774590 ataacataacatatcaacataaagtagtttttttacatttggg 20774632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 188
Target Start/End: Original strand, 28298045 - 28298087
Alignment:
Q  146 ccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||| |||||||||||||||||| | ||||||||||    
T  28298045 ccaatcaaaacagggaaaacccgtcaaattggatttggttcgg 28298087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 48576118 - 48576060
Alignment:
Q  130 atacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||||||||| | |||||| ||||||||||| |||| || | ||||||||||    
T  48576118 atacccatacccaaacctagtcaaaatggggaaaacccatcaatttggatttggttcgg 48576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 17092082 - 17092049
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  17092082 acatatcaacataaagtaattttttacatttggg 17092049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 45866308 - 45866275
Alignment:
Q  24 acatatcaacataaagtagttttttacatttggg 57  Q
    |||||||||||||||||| |||||||||||||||    
T  45866308 acatatcaacataaagtaattttttacatttggg 45866275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 52 - 223
Target Start/End: Original strand, 33397 - 33575
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaaccca--- 148  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| || ||||| ||||||  | |||||||||||||||||       
T  33397 tttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaaac 33496  T
Q  149 ---atcaaaacggggaaaacccgtcaaattaggtttggttc-ggacggtaaccaggagtatagattttgttgccatgcc 223  Q
       ||||||||||| |||||||||||||||  |||| |||| ||  |||||||| |  ||||| |||||||||||||||    
T  33497 ccgatcaaaacgggtaaaacccgtcaaattgagtttagttcaggtgggtaaccacggatataggttttgttgccatgcc 33575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 223
Target Start/End: Original strand, 90600 - 90768
Alignment:
Q  51 atttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaat 150  Q
    ||||| ||||||||| |||| ||||||| |||||||||||| ||||| ||||||||||||| || ||||| ||||      ||||||||||||||||| |    
T  90600 atttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaa------acccatacccaaacccagt 90693  T
Q  151 caaaacggggaaaacccgtcaaattaggtttggttcggac-ggtaaccaggagtat-agattttgttgccatgcc 223  Q
    |||||||||||||| ||||||||||  |||| |||||| | |||||||| | |||| || |||| ||||||||||    
T  90694 caaaacggggaaaatccgtcaaattgagtttagttcgggcgggtaaccacgggtatgagttttttttgccatgcc 90768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 89 - 223
Target Start/End: Original strand, 7738 - 7872
Alignment:
Q  89 ttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttc-g 187  Q
    ||||||||| ||||||||||||| || || ||||||||  || || ||||||||||| ||||||||||||||||||||||||||||||  ||| |||| |    
T  7738 ttacccgtctcatacccgtgttttgaaattggagaaaatcta-acacatacccaaactcaatcaaaacggggaaaacccgtcaaattaaatttagttcgg 7836  T
Q  188 gacggtaaccaggagtatagattttgttgccatgcc 223  Q
    |  |||||||| | |||| |||||||||| ||||||    
T  7837 gtgggtaaccacgggtatggattttgttggcatgcc 7872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 267 - 348
Alignment:
Q  91 acccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaa 172  Q
    ||||||||||||||||||||| ||||| |  ||||||| |||||||||||||||| || ||||||||| |||||||||||||    
T  267 acccgtcccatacccgtgttttgagattgaggaaaactgatacccatacccaaactcagtcaaaacggagaaaacccgtcaa 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 10303 - 10432
Alignment:
Q  54 tgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaa 153  Q
    |||||||||||| |  ||||||||||||||||| |||| ||||||||||||||||||| || | ||| ||||      ||||||||||||||| | ||||    
T  10303 tgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagcgg-gaaa------acccatacccaaacctagtcaa 10395  T
Q  154 aacggggaaaacccgtcaaattaggtttggttcggac 190  Q
    |||||  ||||||||||||||| | ||||||||||||    
T  10396 aacggaaaaaacccgtcaaattggatttggttcggac 10432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 14230 - 14135
Alignment:
Q  89 ttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    |||||||| ||||||||||||||  | ||||| ||||||| | || ||||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  14230 ttacccgttccatacccgtgttttaa-atcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtt 14135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 211368 - 211470
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| || |||||||||| | ||||||| ||| || ||||||||||||  | |||||||||||||| || ||    
T  211368 tttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagtc 211467  T
Q  152 aaa 154  Q
    |||    
T  211468 aaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 70099 - 70154
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgt 107  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||| |||||||    
T  70099 tttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgt 70154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 105553 - 105451
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| || |||||||||||| ||||||| ||  || |||||| ||||   |  ||||||| |||||||||||    
T  105553 tttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgtattaagaaatcggaaaaaatccaatcccatactcaaacccaatc 105454  T
Q  152 aaa 154  Q
    |||    
T  105453 aaa 105451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 154
Target Start/End: Complemental strand, 128205 - 128103
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||||||| ||||||||||| ||||| ||| ||||||||||| ||||||| ||  || || ||| |||||  | || ||||| |||||||||||    
T  128205 tttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatactcaaacccaatc 128106  T
Q  152 aaa 154  Q
    |||    
T  128105 aaa 128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 67753 - 67875
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| || | ||||||||||| ||||| ||||||| ||||||| || |||| |||  | ||||| |||||   | |||||||| |||||||| ||    
T  67753 tttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtc 67852  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| ||||||||||| |||||||    
T  67853 aaatcggggaaaacctgtcaaat 67875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 75596 - 75718
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    ||||||||| || | ||||||||||| ||||| ||||||| ||||||| || |||| |||  | ||||| |||||   | |||||||| |||||||| ||    
T  75596 tttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaacccagtc 75695  T
Q  152 aaaacggggaaaacccgtcaaat 174  Q
    ||| ||||||||||| |||||||    
T  75696 aaatcggggaaaacctgtcaaat 75718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 185
Target Start/End: Original strand, 14779 - 14912
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||||||||| |||   ||||||||||||||||||| ||| ||||||||| |  |||||| || ||||||||||||  | || |||||||||| ||| |     
T  14779 tttgggtatgtgttcaaggtgggtacctatatacccattatccgtcccatgcatgtgttttgaaatcggagaaaacccaaactcatacccaaatccagtg 14878  T
Q  152 aaaacggggaaaacccgtcaaattaggtttggtt 185  Q
    ||||| |  ||| ||||||||||||  |||||||    
T  14879 aaaactgaaaaaccccgtcaaattaaatttggtt 14912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 2973 - 3075
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatc 151  Q
    |||| ||||||||| ||||||||||| ||||| || |||| ||||||  ||||||| ||| || ||||| ||||||  | || |||||||||||||| ||    
T  2973 tttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccagtc 3072  T
Q  152 aaa 154  Q
    |||    
T  3073 aaa 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 14900 - 14988
Alignment:
Q  101 tacccgtgtttcgagatcggagaaaacttatacccataccc-aaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcgg 188  Q
    ||||||||||| || ||||| ||||||  | || ||||||| ||||||||||||| ||| ||||||||||||| |||  ||||||||||    
T  14900 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaatttaaatttggttcgg 14988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 4262 - 4321
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttt 111  Q
    ||||||||||||||||  ||||||||  |||||| ||||||| ||| |||||||||||||    
T  4262 tttgggtatgggtttgaagtgggtacaaatatactcgttaccagtctcatacccgtgttt 4321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 36158 - 36216
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtt 110  Q
    ||||| |||| ||||||| ||| ||||||||||| ||||| |||||| |||||||||||    
T  36158 tttggttatgagtttgggatggatacctatatactcgttatccgtcctatacccgtgtt 36216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 16971 - 17039
Alignment:
Q  52 tttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgg 120  Q
    ||||| |||| ||| ||||||||||| ||||| ||||| ||||||||||||| ||| ||| || |||||    
T  16971 tttggatatgagttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcgg 17039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 107437 - 107361
Alignment:
Q  90 tacccgtcccatacccgtgtttcgagatcggagaaaacttatacccatacccaaacccaatcaaaacggggaaaacc 166  Q
    ||||||||||||||| |||||| || ||||   |||||| | ||| ||||| |||||||||||||  ||||||||||    
T  107437 tacccgtcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtggggaaaacc 107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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