View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2748_low_51 (Length: 350)
Name: NF2748_low_51
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2748_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 9437130 - 9436802
Alignment:
| Q |
1 |
ctgcaagattaacatcttacatataattaggtgtgacgtccgttaatcttgatgtacttttatagaaaatagtttaatatttttgcaaagatttacagag |
100 |
Q |
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| T |
9437130 |
ctgcaagattaacatcttacatataattaggtgtgacgtccgttaattttgatgtactttaatagaaaatagtttaatatttttgcaaagatttacagag |
9437031 |
T |
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| Q |
101 |
gttatatgttataaactttcgattgaacggtgtaacacaaatgttgaaacgaaatatatgaataaagtttaatccactaagatattagaagagtgatagg |
200 |
Q |
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| T |
9437030 |
gttatatgttataaactttcgattgaacggtgtaacacaaatgttgaaacgaaatatatgaataaagtttaatccactaagatattagaagagtgatagg |
9436931 |
T |
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| Q |
201 |
tttacaagtgttgaattgcttctcaagatttgcaattaataagaataaagttaaattgataacatttgagagaataaacttcaagaagaacatgactata |
300 |
Q |
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| T |
9436930 |
tttacaagtgttgaattgcttctcaagatttgcaattaataagaataaagttaaattgataacatttgagagaataaatttcaagaagaacatgactata |
9436831 |
T |
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| Q |
301 |
agagaattcaaatataaactctaattgta |
329 |
Q |
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| T |
9436830 |
agagaattccaatataaactctaattgta |
9436802 |
T |
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