View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2748_low_6 (Length: 704)

Name: NF2748_low_6
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2748_low_6
NF2748_low_6
[»] chr8 (35 HSPs)
chr8 (288-659)||(45452033-45452416)
chr8 (1-284)||(45452779-45453063)
chr8 (655-704)||(32931472-32931521)
chr8 (660-704)||(10989023-10989067)
chr8 (660-704)||(10989230-10989274)
chr8 (660-704)||(16454624-16454668)
chr8 (660-704)||(18905927-18905971)
chr8 (660-704)||(36997237-36997281)
chr8 (660-704)||(43599382-43599426)
chr8 (660-704)||(43984305-43984349)
chr8 (665-704)||(34248430-34248469)
chr8 (665-703)||(7729743-7729781)
chr8 (666-704)||(8559652-8559690)
chr8 (666-704)||(21653875-21653913)
chr8 (666-704)||(34248148-34248186)
chr8 (658-704)||(36993934-36993980)
chr8 (660-704)||(3183900-3183944)
chr8 (660-704)||(15010810-15010854)
chr8 (660-704)||(15011018-15011062)
chr8 (660-704)||(20760649-20760693)
chr8 (660-704)||(21653398-21653442)
chr8 (659-703)||(22451420-22451464)
chr8 (660-704)||(40902382-40902426)
chr8 (660-703)||(30176453-30176496)
chr8 (660-703)||(36039783-36039826)
chr8 (665-703)||(7729978-7730016)
chr8 (665-703)||(36037262-36037300)
chr8 (663-704)||(23027820-23027861)
chr8 (659-696)||(30066061-30066098)
chr8 (660-704)||(20298505-20298549)
chr8 (660-704)||(21085137-21085181)
chr8 (660-704)||(22277595-22277639)
chr8 (665-701)||(27402107-27402143)
chr8 (660-704)||(33435750-33435794)
chr8 (660-696)||(43599551-43599587)
[»] chr5 (42 HSPs)
chr5 (660-704)||(28156101-28156145)
chr5 (659-704)||(34457374-34457419)
chr5 (660-704)||(2908758-2908802)
chr5 (660-704)||(3762977-3763021)
chr5 (660-704)||(12965235-12965279)
chr5 (660-704)||(13413655-13413699)
chr5 (660-704)||(13843768-13843812)
chr5 (660-704)||(24994140-24994184)
chr5 (660-704)||(34457167-34457211)
chr5 (660-704)||(38131835-38131879)
chr5 (660-704)||(40169030-40169074)
chr5 (665-704)||(24918232-24918271)
chr5 (665-704)||(28358029-28358068)
chr5 (665-704)||(37995628-37995667)
chr5 (665-704)||(38663318-38663357)
chr5 (666-704)||(35526983-35527021)
chr5 (666-704)||(35527269-35527307)
chr5 (666-704)||(38376802-38376840)
chr5 (660-704)||(48300-48344)
chr5 (660-704)||(873685-873729)
chr5 (660-704)||(20720539-20720583)
chr5 (660-704)||(24125133-24125177)
chr5 (665-701)||(30758308-30758344)
chr5 (660-704)||(40168848-40168892)
chr5 (665-704)||(15286925-15286964)
chr5 (665-704)||(29432483-29432522)
chr5 (665-704)||(30588124-30588163)
chr5 (665-704)||(43490210-43490249)
chr5 (666-704)||(48099-48137)
chr5 (660-702)||(3015406-3015448)
chr5 (665-695)||(17150242-17150272)
chr5 (660-702)||(27760448-27760490)
chr5 (670-704)||(37656731-37656765)
chr5 (660-702)||(43490452-43490494)
chr5 (660-701)||(11632505-11632546)
chr5 (671-704)||(22196553-22196586)
chr5 (665-698)||(30770058-30770091)
chr5 (658-703)||(36878565-36878610)
chr5 (672-704)||(1892091-1892123)
chr5 (669-701)||(2716620-2716652)
chr5 (660-704)||(18914357-18914401)
chr5 (665-701)||(30769862-30769898)
[»] chr4 (55 HSPs)
chr4 (358-455)||(5579780-5579878)
chr4 (358-503)||(9088076-9088225)
chr4 (659-704)||(36558454-36558499)
chr4 (659-704)||(52214686-52214731)
chr4 (659-704)||(53740253-53740298)
chr4 (660-704)||(23018541-23018585)
chr4 (660-704)||(28395248-28395292)
chr4 (660-704)||(29669352-29669396)
chr4 (660-704)||(45427241-45427285)
chr4 (660-704)||(50858083-50858127)
chr4 (660-704)||(50858396-50858440)
chr4 (660-704)||(51470554-51470598)
chr4 (660-704)||(51470715-51470759)
chr4 (660-704)||(53739937-53739981)
chr4 (665-704)||(43972426-43972465)
chr4 (666-704)||(21498602-21498640)
chr4 (660-702)||(27048126-27048168)
chr4 (666-704)||(54210448-54210486)
chr4 (659-704)||(991275-991320)
chr4 (658-703)||(17222654-17222699)
chr4 (659-704)||(29734632-29734677)
chr4 (660-704)||(990618-990662)
chr4 (660-704)||(5488438-5488482)
chr4 (660-704)||(12016672-12016716)
chr4 (660-704)||(12016880-12016924)
chr4 (660-704)||(15665224-15665268)
chr4 (668-704)||(21497680-21497716)
chr4 (668-704)||(21498258-21498294)
chr4 (660-704)||(25753594-25753638)
chr4 (660-704)||(27048397-27048441)
chr4 (660-704)||(29113520-29113564)
chr4 (660-704)||(35399246-35399290)
chr4 (660-704)||(35399405-35399449)
chr4 (668-704)||(41176777-41176813)
chr4 (660-704)||(43943744-43943788)
chr4 (660-704)||(51469552-51469596)
chr4 (660-704)||(53738197-53738241)
chr4 (659-702)||(17076928-17076971)
chr4 (665-704)||(18435920-18435959)
chr4 (665-704)||(45426930-45426969)
chr4 (665-704)||(56509680-56509719)
chr4 (659-701)||(8559959-8560001)
chr4 (660-702)||(17077133-17077175)
chr4 (391-445)||(22606965-22607019)
chr4 (666-704)||(27634321-27634359)
chr4 (660-702)||(28245861-28245903)
chr4 (658-704)||(32987458-32987504)
chr4 (660-698)||(56511374-56511412)
chr4 (666-703)||(27634526-27634563)
chr4 (659-704)||(34205981-34206026)
chr4 (667-704)||(34206251-34206288)
chr4 (629-662)||(54230653-54230686)
chr4 (660-704)||(13254454-13254498)
chr4 (672-704)||(23311471-23311503)
chr4 (660-704)||(29669667-29669711)
[»] chr6 (33 HSPs)
chr6 (658-704)||(24055096-24055142)
chr6 (659-704)||(1744830-1744875)
chr6 (659-704)||(16876818-16876863)
chr6 (356-461)||(24619359-24619467)
chr6 (660-704)||(16876999-16877043)
chr6 (660-704)||(28149864-28149908)
chr6 (660-704)||(30539306-30539350)
chr6 (665-704)||(8144088-8144127)
chr6 (665-704)||(10733432-10733471)
chr6 (665-704)||(27914320-27914359)
chr6 (666-704)||(10418333-10418371)
chr6 (658-704)||(17096685-17096731)
chr6 (660-698)||(18494502-18494540)
chr6 (658-704)||(19712391-19712437)
chr6 (663-704)||(18494266-18494307)
chr6 (659-704)||(19054564-19054609)
chr6 (668-704)||(1469032-1469068)
chr6 (660-704)||(11313371-11313415)
chr6 (660-704)||(12134472-12134516)
chr6 (660-704)||(15101100-15101144)
chr6 (660-704)||(16590255-16590299)
chr6 (660-704)||(16605081-16605125)
chr6 (660-704)||(17147894-17147938)
chr6 (660-704)||(24558859-24558903)
chr6 (665-704)||(24558654-24558693)
chr6 (659-701)||(15102612-15102654)
chr6 (665-703)||(15293868-15293906)
chr6 (666-704)||(19712604-19712642)
chr6 (659-704)||(21067045-21067090)
chr6 (659-704)||(21088836-21088881)
chr6 (660-696)||(21089152-21089188)
chr6 (658-698)||(25999100-25999140)
chr6 (658-698)||(26098831-26098871)
[»] chr7 (31 HSPs)
chr7 (357-486)||(44397386-44397517)
chr7 (660-704)||(1663593-1663637)
chr7 (660-704)||(6783109-6783153)
chr7 (660-704)||(23396680-23396724)
chr7 (660-704)||(41670904-41670948)
chr7 (657-704)||(23396885-23396932)
chr7 (665-703)||(40703405-40703443)
chr7 (660-704)||(1661180-1661224)
chr7 (660-704)||(28910103-28910147)
chr7 (660-704)||(28910236-28910280)
chr7 (668-704)||(35866636-35866672)
chr7 (660-704)||(40121607-40121651)
chr7 (665-700)||(257261-257296)
chr7 (660-703)||(6813067-6813110)
chr7 (660-703)||(13310414-13310457)
chr7 (665-704)||(36092386-36092425)
chr7 (665-704)||(43288603-43288642)
chr7 (665-704)||(48116290-48116329)
chr7 (666-704)||(7135238-7135276)
chr7 (666-704)||(9378864-9378902)
chr7 (659-697)||(12518158-12518196)
chr7 (665-703)||(40703646-40703684)
chr7 (670-704)||(43384279-43384313)
chr7 (659-704)||(8585162-8585207)
chr7 (660-704)||(12524906-12524950)
chr7 (660-696)||(23821665-23821701)
chr7 (660-704)||(31374836-31374880)
chr7 (658-698)||(33855768-33855808)
chr7 (672-704)||(36238275-36238307)
chr7 (660-700)||(43167882-43167922)
chr7 (660-704)||(43288335-43288379)
[»] chr3 (61 HSPs)
chr3 (659-704)||(22407429-22407474)
chr3 (659-704)||(39956455-39956500)
chr3 (659-704)||(51338391-51338436)
chr3 (660-704)||(4255990-4256034)
chr3 (660-704)||(9264075-9264119)
chr3 (660-704)||(9264282-9264326)
chr3 (660-704)||(22407637-22407681)
chr3 (660-704)||(44573710-44573754)
chr3 (660-704)||(44574007-44574051)
chr3 (656-704)||(47833638-47833686)
chr3 (660-704)||(48685301-48685345)
chr3 (660-704)||(50692394-50692438)
chr3 (660-704)||(50692597-50692641)
chr3 (660-704)||(51642417-51642461)
chr3 (660-704)||(51642624-51642668)
chr3 (665-704)||(4191116-4191155)
chr3 (660-703)||(21832188-21832231)
chr3 (666-704)||(9264495-9264533)
chr3 (666-704)||(39078766-39078804)
chr3 (659-704)||(3985844-3985889)
chr3 (659-704)||(4029632-4029677)
chr3 (659-704)||(21750546-21750591)
chr3 (660-701)||(27177486-27177527)
chr3 (659-704)||(34715443-34715488)
chr3 (659-704)||(41380794-41380839)
chr3 (659-704)||(45443351-45443396)
chr3 (660-704)||(4255581-4255625)
chr3 (660-704)||(4255808-4255852)
chr3 (660-704)||(21833595-21833639)
chr3 (656-704)||(27219400-27219448)
chr3 (660-704)||(37223816-37223860)
chr3 (660-704)||(38300272-38300316)
chr3 (660-704)||(39956663-39956707)
chr3 (660-704)||(50057100-50057144)
chr3 (665-704)||(13769285-13769324)
chr3 (665-704)||(34710671-34710710)
chr3 (669-704)||(49477398-49477433)
chr3 (669-704)||(49477605-49477640)
chr3 (660-698)||(35011734-35011772)
chr3 (660-698)||(35011941-35011979)
chr3 (658-700)||(40230422-40230464)
chr3 (660-698)||(50203846-50203884)
chr3 (660-701)||(11414437-11414478)
chr3 (660-704)||(33909821-33909866)
chr3 (358-423)||(47895842-47895906)
chr3 (668-704)||(10453700-10453736)
chr3 (660-704)||(19820517-19820561)
chr3 (660-704)||(20737091-20737135)
chr3 (660-704)||(22339812-22339856)
chr3 (668-704)||(24539225-24539261)
chr3 (660-704)||(29369862-29369906)
chr3 (668-704)||(34356839-34356875)
chr3 (660-704)||(37058760-37058804)
chr3 (660-704)||(37223646-37223690)
chr3 (660-704)||(38300741-38300785)
chr3 (666-698)||(39078676-39078708)
chr3 (660-704)||(40230628-40230672)
chr3 (672-704)||(44573397-44573429)
chr3 (668-704)||(48407556-48407592)
chr3 (660-704)||(50338371-50338415)
chr3 (660-704)||(54591454-54591498)
[»] chr2 (40 HSPs)
chr2 (659-704)||(42768322-42768367)
chr2 (659-704)||(43195855-43195900)
chr2 (660-704)||(21214190-21214234)
chr2 (660-704)||(32667254-32667298)
chr2 (660-704)||(33985760-33985804)
chr2 (665-704)||(901994-902033)
chr2 (665-704)||(7877915-7877954)
chr2 (665-704)||(17727475-17727514)
chr2 (653-704)||(40010045-40010096)
chr2 (666-704)||(3976466-3976504)
chr2 (666-704)||(3976998-3977036)
chr2 (659-704)||(25441767-25441812)
chr2 (659-704)||(25621273-25621318)
chr2 (659-704)||(34775428-34775473)
chr2 (660-704)||(883921-883965)
chr2 (660-704)||(5424771-5424815)
chr2 (660-704)||(6183355-6183399)
chr2 (660-704)||(12431969-12432013)
chr2 (406-450)||(15372356-15372400)
chr2 (660-704)||(20998978-20999022)
chr2 (660-704)||(23054397-23054441)
chr2 (668-704)||(25286257-25286293)
chr2 (668-704)||(30160398-30160434)
chr2 (669-704)||(93136-93171)
chr2 (665-704)||(10429810-10429849)
chr2 (665-704)||(11969123-11969162)
chr2 (660-703)||(25082691-25082734)
chr2 (666-704)||(3435481-3435519)
chr2 (666-704)||(3976780-3976818)
chr2 (391-462)||(18906786-18906859)
chr2 (659-704)||(19860108-19860154)
chr2 (658-704)||(31761402-31761448)
chr2 (659-704)||(883589-883634)
chr2 (659-704)||(25441918-25441963)
chr2 (667-704)||(32667048-32667085)
chr2 (672-704)||(9889320-9889352)
chr2 (668-704)||(16007048-16007084)
chr2 (660-704)||(29923370-29923413)
chr2 (668-704)||(30156279-30156315)
chr2 (660-696)||(31761211-31761247)
[»] chr1 (49 HSPs)
chr1 (660-704)||(9380971-9381015)
chr1 (660-704)||(19481381-19481425)
chr1 (660-704)||(20735593-20735637)
chr1 (660-704)||(29273055-29273099)
chr1 (660-704)||(29273214-29273258)
chr1 (660-703)||(2997045-2997088)
chr1 (665-704)||(15392096-15392135)
chr1 (658-704)||(15392175-15392221)
chr1 (665-703)||(22892682-22892720)
chr1 (659-704)||(31305782-31305827)
chr1 (659-704)||(33879766-33879811)
chr1 (659-704)||(33964444-33964489)
chr1 (659-704)||(35926236-35926281)
chr1 (659-704)||(48558309-48558354)
chr1 (668-704)||(463080-463116)
chr1 (660-704)||(4022114-4022158)
chr1 (660-704)||(9381170-9381214)
chr1 (668-704)||(11149420-11149456)
chr1 (660-704)||(17419858-17419902)
chr1 (357-458)||(23615462-23615560)
chr1 (660-704)||(29272896-29272940)
chr1 (672-704)||(31789420-31789452)
chr1 (660-704)||(39649073-39649117)
chr1 (660-704)||(43423350-43423394)
chr1 (660-704)||(46098548-46098592)
chr1 (660-704)||(52846838-52846882)
chr1 (665-704)||(21538928-21538967)
chr1 (665-704)||(27957803-27957842)
chr1 (665-704)||(35024454-35024493)
chr1 (665-703)||(22892427-22892465)
chr1 (670-704)||(28509386-28509420)
chr1 (658-704)||(43361539-43361585)
chr1 (654-704)||(45264733-45264783)
chr1 (660-701)||(2997250-2997291)
chr1 (659-704)||(13959473-13959518)
chr1 (659-704)||(15013596-15013641)
chr1 (675-704)||(20208109-20208138)
chr1 (675-704)||(20208408-20208437)
chr1 (357-418)||(23646796-23646856)
chr1 (660-701)||(37600946-37600987)
chr1 (672-704)||(2104261-2104293)
chr1 (660-704)||(2697320-2697364)
chr1 (660-704)||(8520082-8520126)
chr1 (660-704)||(15391890-15391934)
chr1 (660-704)||(19937032-19937076)
chr1 (660-704)||(20735826-20735870)
chr1 (660-696)||(21638255-21638291)
chr1 (672-704)||(36332183-36332215)
chr1 (660-704)||(45403511-45403555)
[»] scaffold0989 (1 HSPs)
scaffold0989 (658-704)||(2934-2980)
[»] scaffold1138 (1 HSPs)
scaffold1138 (665-704)||(2073-2112)
[»] scaffold0419 (1 HSPs)
scaffold0419 (666-704)||(4234-4272)
[»] scaffold0060 (1 HSPs)
scaffold0060 (666-704)||(20611-20649)
[»] scaffold0029 (1 HSPs)
scaffold0029 (666-704)||(76923-76961)
[»] scaffold0434 (1 HSPs)
scaffold0434 (660-704)||(13377-13421)


Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-157; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-157
Query Start/End: Original strand, 288 - 659
Target Start/End: Complemental strand, 45452416 - 45452033
Alignment:
Q  288 ttttacatttaatcatgccacatgaaagggtgtatgatggagatatgcaaccacgagcaagtctt-----------acctcaaataaaagttatttggac 376  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||           ||||||||||||||||||||||||    
T  45452416 ttttacatttaatcatgccacatgaaagggtgtatcatggacatatgcaaccacgaacaagtcttctatacgcacaacctcaaataaaagttatttggac 45452317  T
Q  377 acaca-gctagattcataaaattgaaaagagaaatgatattaaatgatttcactaaaatatttcttttaaattttctcattcatgtaaacatgtttaaat 475  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  45452316 acacacgttagattcataaaattgaaaagagaaatgatattaaatgatttgactaaaatatttcttttaaattttcccattcatgtaaacatgtttaatt 45452217  T
Q  476 aattttgattttgggttgagcccaaccaaatattcatataccacctaatgatgttaaaatacacgataagattagatttcctcaaagaaattgtaataga 575  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45452216 aattttaagtttgggttgagcccaaccaaatattcatataccacctaaggatgttaaaatacacgataagattagatttcctcaaagatattgtaataga 45452117  T
Q  576 aattccatgtttgatcataccatcagtgacatggtagaatcttatatgctagtagcatttgaatgacatataattggtgacatt 659  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  45452116 aattccatgtttgattataccatcagtgacatggtagaatcttatatgctagtaatatttgaatgacatataattggtgacatt 45452033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 45453063 - 45452779
Alignment:
Q  1 tcaatctcaccgtcaatattgttgcatctcgctgcgatctcaagtcatgctacgaaggagagatattggtgaattggtgactcagtggagatggaagtga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45453063 tcaatctcaccgtcaatattgttgcatctcgctgcgatctcaagtcatgctacgaaggagagatattggtgaattggtgactcagtggagatggaagtga 45452964  T
Q  101 cctgatggttcgaagctttttatgggtatgaaatag-nnnnnnnnngtatgcaggaaagaggcgccacaattgctagaggggacaacagggttaaggtag 199  Q
    ||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45452963 cctgatggttcgaagctttttatgggtatgaaatagttttttttttgtatgcaggaaagaggcgccacaattgctagaggggacaacagggtgaaggtag 45452864  T
Q  200 atgggagagaggacatttttcatgagatagagattgtgtgcgggctaatggagaaagagctcactaggttaaagagataaatata 284  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45452863 atgggagagagaacatttttcatgagatagagattgtgtgcgggctaatggagaaagagctcactaggttaaagagataaatata 45452779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 655 - 704
Target Start/End: Complemental strand, 32931521 - 32931472
Alignment:
Q  655 acatttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  32931521 acatttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 32931472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 10989023 - 10989067
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  10989023 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 10989067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 10989230 - 10989274
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  10989230 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 10989274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 16454624 - 16454668
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  16454624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 16454668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 18905971 - 18905927
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18905971 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 18905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 36997281 - 36997237
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  36997281 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 36997237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 43599426 - 43599382
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  43599426 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 43599382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 43984305 - 43984349
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  43984305 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 43984349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 34248469 - 34248430
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  34248469 aaatttggggcctaactcatccttacaaaaccggcttgta 34248430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 7729781 - 7729743
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  7729781 aaatttggggcctaactcatccttacaaaaccggcttgt 7729743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 8559690 - 8559652
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  8559690 aatttggggcctaactcatccttacaaaaccggcttgta 8559652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 21653913 - 21653875
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21653913 aatttggggcctaactcatccttacaaaaccggcttgta 21653875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 34248186 - 34248148
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  34248186 aatttggggcctaactcatccttacaaaaccggcttgta 34248148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 36993934 - 36993980
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||||||    
T  36993934 tttgttgaaatttgaggcctaactcatccttacaaaaccggcttgta 36993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 3183900 - 3183944
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||    
T  3183900 tgttgaaatttggggcctaactcatcgttacaaaaccggcttgta 3183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 15010810 - 15010854
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||    
T  15010810 tgttgaaatttggggcctaactcatccttataaaaccggcttgta 15010854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 15011018 - 15011062
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  15011018 tgttgaaatttggggcttaactcatccttacaaaaccggcttgta 15011062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 20760649 - 20760693
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||    
T  20760649 tgttgaaatttggggcctaactcatccttacaaaaccggtttgta 20760693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 21653442 - 21653398
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||    
T  21653442 tgttgaaatttggagcctaactcatccttacaaaaccggcttgta 21653398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 659 - 703
Target Start/End: Complemental strand, 22451464 - 22451420
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||    
T  22451464 ttgttgaaatttggggcataactcatccttacaaaaccggcttgt 22451420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 40902382 - 40902426
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||    
T  40902382 tgttgaaatttggggcctaacttatccttacaaaaccggcttgta 40902426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 30176453 - 30176496
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||| ||||||||| |||||||||||||||||||||||    
T  30176453 tgttgaaattcggggcctaactcatccttacaaaaccggcttgt 30176496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 36039783 - 36039826
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| |||||||||| |||| |||||||||||||||||||||||    
T  36039783 tgttgaaatttggggtctaactcatccttacaaaaccggcttgt 36039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 7730016 - 7729978
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  7730016 aaatatggggcctaactcatccttacaaaaccggcttgt 7729978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 703
Target Start/End: Complemental strand, 36037300 - 36037262
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||||||||| |||| |||||||||||||||||||||||    
T  36037300 aaatttggggtctaactcatccttacaaaaccggcttgt 36037262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 663 - 704
Target Start/End: Original strand, 23027820 - 23027861
Alignment:
Q  663 ttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||||| |||| |||| ||||||||||||||    
T  23027820 ttaaatttggggcctaactcattcttaaaaaaccggcttgta 23027861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 696
Target Start/End: Complemental strand, 30066098 - 30066061
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  30066098 ttgttgaaatttggggcctaactcatccttacaaaacc 30066061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 20298505 - 20298549
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||||    
T  20298505 tgttgaaatttggggcctaactcatcattacaaaaccagcttgta 20298549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 21085137 - 21085181
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||| |||||||||| |||||||    
T  21085137 tgttgaaatttggggcctaactcatcattacaaaaccagcttgta 21085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 22277639 - 22277595
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||  ||| ||||||||||||||||||||||||    
T  22277639 tgttgaaatttggggattaactcatccttacaaaaccggcttgta 22277595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 665 - 701
Target Start/End: Original strand, 27402107 - 27402143
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  27402107 aaatttggggcctaattcatccttacaagacctgctt 27402143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 33435794 - 33435750
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||| ||||||    
T  33435794 tgttgaaatttggggtctaactcatccttacaaaaccgacttgta 33435750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 696
Target Start/End: Complemental strand, 43599587 - 43599551
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  43599587 tgttgaaatttggggcctaactcatccttacaaaacc 43599551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 28156145 - 28156101
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  28156145 tgttgaaatttggggcctaattcatccttacaaaaccggcttgta 28156101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 34457419 - 34457374
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34457419 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 34457374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 2908758 - 2908802
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  2908758 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 2908802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 3763021 - 3762977
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  3763021 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 3762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 12965235 - 12965279
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  12965235 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 12965279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 13413699 - 13413655
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  13413699 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 13413655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 13843812 - 13843768
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  13843812 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 13843768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 24994184 - 24994140
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  24994184 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 24994140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 34457211 - 34457167
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  34457211 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 34457167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 38131879 - 38131835
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  38131879 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 38131835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 40169030 - 40169074
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  40169030 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 40169074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 24918271 - 24918232
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  24918271 aaatttggggcctaactcatccttacaaaaccggcttgta 24918232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 28358029 - 28358068
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  28358029 aaatttggggcctaactcatccttacaaaaccggcttgta 28358068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 37995628 - 37995667
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  37995628 aaatttggggcctaactcatccttacaaaaccggcttgta 37995667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 38663357 - 38663318
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  38663357 aaatttggggcctaactcatccttacaaaaccggcttgta 38663318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 35526983 - 35527021
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  35526983 aatttggggcctaactcatccttacaaaaccggcttgta 35527021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 35527269 - 35527307
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  35527269 aatttggggcctaactcatccttacaaaaccggcttgta 35527307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 38376840 - 38376802
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38376840 aatttggggcctaactcatccttacaaaaccggcttgta 38376802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 48300 - 48344
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  48300 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 48344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 873685 - 873729
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||    
T  873685 tgttgaaatttggggcctaactcatccttacaaaacctgcttgta 873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 20720539 - 20720583
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  20720539 tgttaaaatttggggtctaactcatccttacaaaaccggcttgta 20720583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 24125177 - 24125133
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  24125177 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 24125133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 665 - 701
Target Start/End: Original strand, 30758308 - 30758344
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggctt 701  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30758308 aaatttggggcctaactcatccttacaaaaccggctt 30758344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 40168848 - 40168892
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||    
T  40168848 tgttgaaatttggggcctaactcatccttacaaaaccagcttgta 40168892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 15286964 - 15286925
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  15286964 aaatttggggtctaattcatccttacaaaaccagcttgta 15286925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 29432522 - 29432483
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  29432522 aaatttgtggcctaactcatccttacaaaaccggcttgta 29432483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 30588163 - 30588124
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  30588163 aaatttggggcctaactcatccttacaaaacaggcttgta 30588124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 43490210 - 43490249
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  43490210 aaatttggggcctaactcatcctcacaaaaccggcttgta 43490249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 48099 - 48137
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  48099 aattgggggcctaactcatccttacaaaaccggcttgta 48137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 702
Target Start/End: Original strand, 3015406 - 3015448
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||    
T  3015406 tgttgaaatttggggcctaactcaaccttacaaaaccggcttg 3015448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 695
Target Start/End: Original strand, 17150242 - 17150272
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaac 695  Q
    |||||||||||||||||||||||||||||||    
T  17150242 aaatttggggcctaattcatccttacaaaac 17150272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 27760490 - 27760448
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| |||||||||| |||| ||||||||||||||||||||||    
T  27760490 tgttgaaatttggggtctaactcatccttacaaaaccggcttg 27760448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 670 - 704
Target Start/End: Original strand, 37656731 - 37656765
Alignment:
Q  670 tggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| ||||||||||||||||||||||||    
T  37656731 tggggcctaactcatccttacaaaaccggcttgta 37656765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 702
Target Start/End: Original strand, 43490452 - 43490494
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||    
T  43490452 tgttgaaattgggggcctaactcatccttacaaaaccggcttg 43490494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 11632546 - 11632505
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||| |||||||||||| || |||||||||||||||||||||    
T  11632546 tgttgaaatttggggcccaactcatccttacaaaaccggctt 11632505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 704
Target Start/End: Original strand, 22196553 - 22196586
Alignment:
Q  671 ggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||| ||||||||||||||||||||||||    
T  22196553 ggggcctaactcatccttacaaaaccggcttgta 22196586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 698
Target Start/End: Original strand, 30770058 - 30770091
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccgg 698  Q
    ||||||||||||||| ||||||||||||||||||    
T  30770058 aaatttggggcctaactcatccttacaaaaccgg 30770091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 703
Target Start/End: Complemental strand, 36878610 - 36878565
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||||| ||||||| || |||| |||||||||||||||||||||||    
T  36878610 tttgttgaaatttgaggtctaactcatccttacaaaaccggcttgt 36878565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Original strand, 1892091 - 1892123
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  1892091 gggcctaactcatccttacaaaaccggcttgta 1892123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 669 - 701
Target Start/End: Complemental strand, 2716652 - 2716620
Alignment:
Q  669 ttggggcctaattcatccttacaaaaccggctt 701  Q
    ||||||||||| |||||||||||||||||||||    
T  2716652 ttggggcctaactcatccttacaaaaccggctt 2716620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 18914357 - 18914401
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||| ||||||||||| |||||||    
T  18914357 tgttgaaatttggggcctaactcattcttacaaaaccagcttgta 18914401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 665 - 701
Target Start/End: Original strand, 30769862 - 30769898
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggctt 701  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  30769862 aaatttgaggcctaactcatccttacaaaaccggctt 30769898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 358 - 455
Target Start/End: Complemental strand, 5579878 - 5579780
Alignment:
Q  358 aaataaaagttatttggacacacagctagattcataaaattgaaaagagaaatgatattaaatgatttcactaaaatatt--tcttttaaattttctcat 455  Q
    |||||||| ||||| |||||||||  | ||||||||||||| |||||| ||||||||||||||||| | |||||| ||||  ||||||||||||| ||||    
T  5579878 aaataaaatttattgggacacacatat-gattcataaaatttaaaagaaaaatgatattaaatgatgtgactaaattatttctcttttaaattttatcat 5579780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 503
Target Start/End: Original strand, 9088076 - 9088225
Alignment:
Q  358 aaataaaagttatttggacacacagcta-gattcataaaa-ttgaaaagagaaatgatattaaatgatttcactaaaatatttct--tttaaattttctc 453  Q
    |||||||||||||||||| |||||   | |||| |||||| || ||||||||||||||||||| | || | |||||| |||||||  |||||||||| ||    
T  9088076 aaataaaagttatttggaaacacacacatgattgataaaaatttaaaagagaaatgatattaagtaatgtgactaaactatttctcttttaaattttatc 9088175  T
Q  454 attcatgtaaacatgtttaaataattttgattttgggttgagcccaacca 503  Q
    ||||| ||||   ||| |||||| ||||||||| |||||| ||| |||||    
T  9088176 attcaagtaagtgtgtctaaatacttttgatttggggttgtgccgaacca 9088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 36558454 - 36558499
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36558454 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 36558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 52214731 - 52214686
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  52214731 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 52214686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 53740298 - 53740253
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  53740298 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 53740253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 23018585 - 23018541
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  23018585 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 23018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 28395292 - 28395248
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  28395292 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 28395248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 29669352 - 29669396
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  29669352 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 29669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 45427241 - 45427285
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  45427241 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 45427285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 50858127 - 50858083
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  50858127 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 50858083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 50858440 - 50858396
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  50858440 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 50858396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 51470598 - 51470554
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  51470598 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51470554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 51470759 - 51470715
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  51470759 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51470715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 53739981 - 53739937
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  53739981 tgttgaaatttggggcctaaatcatccttacaaaaccggcttgta 53739937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 43972465 - 43972426
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  43972465 aaatttggggcctaactcatccttacaaaaccggcttgta 43972426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 21498640 - 21498602
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21498640 aatttggggcctaactcatccttacaaaaccggcttgta 21498602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 702
Target Start/End: Original strand, 27048126 - 27048168
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| ||||||||||||||| ||||||||||||||||||||||    
T  27048126 tgttgaaatttggggcctaactcatccttacaaaaccggcttg 27048168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 54210486 - 54210448
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  54210486 aatttggggcctaactcatccttacaaaaccggcttgta 54210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 991320 - 991275
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  991320 ttgttgaaatttggggtctaactcatccttacaaaaccggcttgta 991275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 703
Target Start/End: Original strand, 17222654 - 17222699
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||    
T  17222654 tttgttgaaatttggggcctaacacatccttacaaaaccggcttgt 17222699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 29734677 - 29734632
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||    
T  29734677 ttgttgaaatttggggcccaactcatccttacaaaaccggcttgta 29734632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 990662 - 990618
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||    
T  990662 tgttgaaatttggggcctaactcatccttacaaaaccgacttgta 990618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 5488482 - 5488438
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  5488482 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgta 5488438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 12016672 - 12016716
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  12016672 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 12016716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 12016880 - 12016924
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  12016880 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 12016924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 15665268 - 15665224
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  15665268 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgta 15665224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 21497680 - 21497716
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21497680 tttggggcctaactcatccttacaaaaccggcttgta 21497716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 21498294 - 21498258
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  21498294 tttggggcctaactcatccttacaaaaccggcttgta 21498258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 25753594 - 25753638
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||    
T  25753594 tgttgaaatttgggacctaactcatccttacaaaaccggcttgta 25753638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 27048397 - 27048441
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||    
T  27048397 tgttgaaatttgggacctaactcatccttacaaaaccggcttgta 27048441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 29113564 - 29113520
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||    
T  29113564 tgttgaaatttggggcctaactcatccttacaaaaccagcttgta 29113520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 35399246 - 35399290
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||    
T  35399246 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgta 35399290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 35399405 - 35399449
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||||    
T  35399405 tgttgaaatttggggcctaactcaaccttacaaaaccggcttgta 35399449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 41176813 - 41176777
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  41176813 tttggggcctaactcatccttacaaaaccggcttgta 41176777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 43943788 - 43943744
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  43943788 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 43943744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 51469596 - 51469552
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  51469596 tgttgaaatttggggcctaactcatccttacacaaccggcttgta 51469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 53738197 - 53738241
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  53738197 tgttgaaatttggggcctaagtcatccttacaaaactggcttgta 53738241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 702
Target Start/End: Original strand, 17076928 - 17076971
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||    
T  17076928 ttgttgaaatttggggcctaactcaaccttacaaaaccggcttg 17076971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 18435920 - 18435959
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  18435920 aaatttggggcctaacacatccttacaaaaccggcttgta 18435959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 45426930 - 45426969
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||| ||||||    
T  45426930 aaatttggggcctaactcatccttacaaaaccgacttgta 45426969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 56509719 - 56509680
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  56509719 aaatttggggcctaactcatccgtacaaaaccggcttgta 56509680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 701
Target Start/End: Original strand, 8559959 - 8560001
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    ||||| |||||||||| |||| |||||||||||||||||||||    
T  8559959 ttgttgaaatttggggtctaactcatccttacaaaaccggctt 8560001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 702
Target Start/End: Original strand, 17077133 - 17077175
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| ||||||||||||||| ||| ||||||||||||||||||    
T  17077133 tgttgaaatttggggcctaactcaaccttacaaaaccggcttg 17077175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 22607019 - 22606965
Alignment:
Q  391 ataaaattgaaaagagaaatgatattaaatgatttcactaaaatatttcttttaa 445  Q
    |||||||| |||||||||||| |||||| |||| | |||||| ||||||||||||    
T  22607019 ataaaatttaaaagagaaatgttattaagtgatgtgactaaattatttcttttaa 22606965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 27634321 - 27634359
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  27634321 aatttggggcctaactcatccttacaaaatcggcttgta 27634359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 702
Target Start/End: Complemental strand, 28245903 - 28245861
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttg 702  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||    
T  28245903 tgttgaaattgggggcctaactcatccttacaaaaccggcttg 28245861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 32987458 - 32987504
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| |||||| |||||||| ||||||||||||||||| ||||||    
T  32987458 tttgttgaaatttagggcctaaatcatccttacaaaaccgacttgta 32987504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 56511412 - 56511374
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  56511412 tgttgaaatttggggcctaactcatccttacaaaaccgg 56511374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 703
Target Start/End: Original strand, 27634526 - 27634563
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  27634526 aatttggggcctaactcatcgttacaaaaccggcttgt 27634563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 34205981 - 34206026
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  34205981 ttgttgaaatttgggacctaactcatccttacaaaaccagcttgta 34206026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 704
Target Start/End: Original strand, 34206251 - 34206288
Alignment:
Q  667 atttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||| |||||||||| |||||||||||||    
T  34206251 atttggggcctaactcatccttacgaaaccggcttgta 34206288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 662
Target Start/End: Complemental strand, 54230686 - 54230653
Alignment:
Q  629 agcatttgaatgacatataattggtgacatttgt 662  Q
    |||||||| |||||||||||||||||||||||||    
T  54230686 agcatttggatgacatataattggtgacatttgt 54230653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 13254498 - 13254454
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||    
T  13254498 tgttgaaatttggggcctaactcatgcttacaaaaccgggttgta 13254454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Original strand, 23311471 - 23311503
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  23311471 gggcctaagtcatccttacaaaaccggcttgta 23311503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 29669667 - 29669711
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||  ||| ||||||||||||||||||||||||    
T  29669667 tgttgaaatttggggtttaactcatccttacaaaaccggcttgta 29669711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 24055096 - 24055142
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  24055096 tttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 24055142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 1744830 - 1744875
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  1744830 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 1744875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 16876818 - 16876863
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  16876818 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 16876863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 461
Target Start/End: Complemental strand, 24619467 - 24619359
Alignment:
Q  356 tcaaataaaagttatttggacacacagcta-gattcataaaattgaaaagagaaatgatattaaatgatttcactaaaatatt--tcttttaaattttct 452  Q
    |||||||||| |||||||| | ||||  || |||| |||||||| |||||| |||||||||||| |||| | |||||| ||||  ||||||||||||| |    
T  24619467 tcaaataaaatttatttgggcgcacacatatgattaataaaatttaaaagaaaaatgatattaagtgatgtaactaaattatttctcttttaaattttat 24619368  T
Q  453 cattcatgt 461  Q
    |||||||||    
T  24619367 cattcatgt 24619359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 16876999 - 16877043
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  16876999 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 16877043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 28149908 - 28149864
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  28149908 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 28149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 30539350 - 30539306
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  30539350 tgttgaaatttggggcctagttcatccttacaaaaccggcttgta 30539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 8144127 - 8144088
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  8144127 aaatttggggcctaactcatccttacaaaaccggcttgta 8144088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 10733432 - 10733471
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  10733432 aaatttggggcctaactcatccttacaaaaccggcttgta 10733471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 27914320 - 27914359
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  27914320 aaatttggggcctaactcatccttacaaaaccggcttgta 27914359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 10418333 - 10418371
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  10418333 aatttggggcctaactcatccttacaaaaccggcttgta 10418371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 17096685 - 17096731
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||    
T  17096685 tttgttgaaatttggggtctaactcatccttacaaaaccggcttgta 17096731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 18494540 - 18494502
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  18494540 tgttgaaatttggggcctaattcatccttacaaaaccgg 18494502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 19712391 - 19712437
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||||    
T  19712391 tttgttgaaatttggggcctaactcatccttacaaaatcggcttgta 19712437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 663 - 704
Target Start/End: Original strand, 18494266 - 18494307
Alignment:
Q  663 ttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  18494266 ttaaaattgggggctaattcatccttacaaaaccggcttgta 18494307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 19054609 - 19054564
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||    
T  19054609 ttgttgaaatttggggactaactcatccttacaaaaccggcttgta 19054564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 1469068 - 1469032
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  1469068 tttggggcctaactcatccttacaaaaccggcttgta 1469032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 11313371 - 11313415
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  11313371 tgttgaaatttggggcctaactcatccttacaaaactggcttgta 11313415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 12134472 - 12134516
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||    
T  12134472 tgttgaaatttggggcctaactcatccttacaaaaccggtttgta 12134516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 15101100 - 15101144
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  15101100 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 15101144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 16590299 - 16590255
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  16590299 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 16590255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 16605081 - 16605125
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  16605081 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 16605125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 17147894 - 17147938
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  17147894 tgttgaaatttgtggcctaactcatccttacaaaaccggcttgta 17147938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 24558903 - 24558859
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||    
T  24558903 tgttgaaatttggggcctaactcatccttacaaaaccagcttgta 24558859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 24558693 - 24558654
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  24558693 aaatttggggcctaactcatcctcacaaaaccggcttgta 24558654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 701
Target Start/End: Original strand, 15102612 - 15102654
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    ||||| |||||||||| |||| |||||||||||||||||||||    
T  15102612 ttgttgaaatttggggtctaactcatccttacaaaaccggctt 15102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 15293868 - 15293906
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  15293868 aaatttggggtctaattcatccttataaaaccggcttgt 15293906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 19712604 - 19712642
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  19712604 aatttggggcctaactcatccttacaaaaccagcttgta 19712642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 21067045 - 21067090
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||||||||  |||| ||||||||||||||||||    
T  21067045 ttgttgaaatttggggcctaacacatctttacaaaaccggcttgta 21067090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 21088836 - 21088881
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||||||||  |||| ||||||||||||||||||    
T  21088836 ttgttgaaatttggggcctaacacatctttacaaaaccggcttgta 21088881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 696
Target Start/End: Original strand, 21089152 - 21089188
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  21089152 tgttgaaatttggggcctaactcatccttacaaaacc 21089188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 698
Target Start/End: Complemental strand, 25999140 - 25999100
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||||| ||||||||||||||| |||| |||||||||||||    
T  25999140 tttgttgaaatttggggcctaactcattcttacaaaaccgg 25999100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 698
Target Start/End: Complemental strand, 26098871 - 26098831
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||||| ||||||||||||||| |||| |||||||||||||    
T  26098871 tttgttgaaatttggggcctaactcattcttacaaaaccgg 26098831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 357 - 486
Target Start/End: Original strand, 44397386 - 44397517
Alignment:
Q  357 caaataaaagttatttgg-acacacagctagattcataaaattgaaaagagaaatgatattaaatgatttcactaaaatatt--tcttttaaattttctc 453  Q
    ||||||||| |||| ||| ||||||| | ||||| |||||||| ||||||||||| ||||||| |||| | |||||| ||||  ||||||||||||| ||    
T  44397386 caaataaaatttatgtggcacacaca-caagattgataaaatttaaaagagaaatcatattaagtgatgtgactaaattatttctcttttaaattttatc 44397484  T
Q  454 attcatgtaaacatgtttaaataattttgattt 486  Q
    ||||| || |  |||| |||||| |||||||||    
T  44397485 attcaagtgagtatgtctaaatacttttgattt 44397517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 1663593 - 1663637
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  1663593 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 1663637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 6783153 - 6783109
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  6783153 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 6783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 23396724 - 23396680
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  23396724 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 23396680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 41670948 - 41670904
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  41670948 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 41670904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 657 - 704
Target Start/End: Complemental strand, 23396932 - 23396885
Alignment:
Q  657 atttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  23396932 atttgttgaaatttggggtctaactcatccttacaaaaccggcttgta 23396885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 40703405 - 40703443
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40703405 aaatttggggcctaactcatccttacaaaaccggcttgt 40703443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 1661180 - 1661224
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||    
T  1661180 tgttgaaatttggggcctaactcattcttacaaaaccggcttgta 1661224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 28910147 - 28910103
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  28910147 tgttgaaatttgggggctaactcatccttacaaaaccggcttgta 28910103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 28910280 - 28910236
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  28910280 tgttgaaatttgggggctaactcatccttacaaaaccggcttgta 28910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 35866636 - 35866672
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35866636 tttggggcctaactcatccttacaaaaccggcttgta 35866672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 40121607 - 40121651
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  40121607 tgttgaaatttggggcgtaactcatccttacaaaaccggcttgta 40121651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 700
Target Start/End: Original strand, 257261 - 257296
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggct 700  Q
    ||||||||||||||| ||||||||||||||||||||    
T  257261 aaatttggggcctaactcatccttacaaaaccggct 257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 6813067 - 6813110
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||||||||||||| ||||||| |||||||||||||||    
T  6813067 tgttgaaatttggggcctaactcatcctcacaaaaccggcttgt 6813110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 13310414 - 13310457
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||    
T  13310414 tgttgaaatttggggcctaactcatccttacaaaaccggtttgt 13310457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 36092386 - 36092425
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||| ||||||||||||||||||||||||    
T  36092386 aaattcggggcctaactcatccttacaaaaccggcttgta 36092425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 43288642 - 43288603
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  43288642 aaatttggggcctaactaatccttacaaaaccggcttgta 43288603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 48116290 - 48116329
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  48116290 aaatttggagcctaactcatccttacaaaaccggcttgta 48116329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 7135238 - 7135276
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  7135238 aatttggggcctaactcatctttacaaaaccggcttgta 7135276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 9378902 - 9378864
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  9378902 aatttggggtctaactcatccttacaaaaccggcttgta 9378864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 697
Target Start/End: Original strand, 12518158 - 12518196
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccg 697  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  12518158 ttgttaaaatttggggcctaactcatccttacaaaaccg 12518196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 40703646 - 40703684
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  40703646 aaattaggggcctaactcatccttacaaaaccggcttgt 40703684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 670 - 704
Target Start/End: Original strand, 43384279 - 43384313
Alignment:
Q  670 tggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| ||||||||||||||||||||||||    
T  43384279 tggggcctaactcatccttacaaaaccggcttgta 43384313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 8585207 - 8585162
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||| |||| |||||||||||||||| |||||||    
T  8585207 ttgttgaaatttggggtctaactcatccttacaaaaccagcttgta 8585162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 12524950 - 12524906
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| |||| ||||||||||||||||| |||||    
T  12524950 tgttgaaatttggggcataatccatccttacaaaaccggtttgta 12524906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 696
Target Start/End: Original strand, 23821665 - 23821701
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  23821665 tgttgaaatttggggcctaactcatccttacaaaacc 23821701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 31374880 - 31374836
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| |||| |||| ||||||||||||||||||||||||    
T  31374880 tgttgaaattcggggtctaactcatccttacaaaaccggcttgta 31374836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 658 - 698
Target Start/End: Complemental strand, 33855808 - 33855768
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||||| ||||||||||||||| |||| |||||||||||||    
T  33855808 tttgttgaaatttggggcctaactcattcttacaaaaccgg 33855768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Complemental strand, 36238307 - 36238275
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  36238307 gggcctaactcatccttacaaaaccggcttgta 36238275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 700
Target Start/End: Original strand, 43167882 - 43167922
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggct 700  Q
    |||| ||||||||||| ||| ||||||||||||||||||||    
T  43167882 tgttgaaatttggggcttaactcatccttacaaaaccggct 43167922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 43288379 - 43288335
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||| |||||||||||||| |||||    
T  43288379 tgttcaaatttggggcctaactcacccttacaaaaccggattgta 43288335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 22407429 - 22407474
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  22407429 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 22407474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 39956455 - 39956500
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  39956455 ttgttgaaatttggggcctaattcatccttacaaaactggcttgta 39956500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 51338391 - 51338436
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  51338391 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51338436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 4256034 - 4255990
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  4256034 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 4255990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 9264075 - 9264119
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  9264075 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 9264119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 9264282 - 9264326
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  9264282 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 9264326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 22407637 - 22407681
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  22407637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 22407681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 44573754 - 44573710
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  44573754 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 44573710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 44574051 - 44574007
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  44574051 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 44574007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 656 - 704
Target Start/End: Original strand, 47833638 - 47833686
Alignment:
Q  656 catttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  47833638 catttgttgaaatttggggcctaaatcatccttacaaaaccagcttgta 47833686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 48685301 - 48685345
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  48685301 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 48685345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 50692438 - 50692394
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  50692438 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 50692394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 50692641 - 50692597
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  50692641 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 50692597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 51642417 - 51642461
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  51642417 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51642461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 51642624 - 51642668
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  51642624 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 51642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 4191116 - 4191155
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4191116 aaatttggggcctaactcatccttacaaaaccggcttgta 4191155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 21832188 - 21832231
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  21832188 tgttgaaatttggggcctaactcatccttacaaaaccggcttgt 21832231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 9264495 - 9264533
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  9264495 aatttggggcctaactcatccttacaaaaccggcttgta 9264533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 39078766 - 39078804
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  39078766 aatttggggcctaactcatccttacaaaaccggcttgta 39078804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 3985889 - 3985844
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| || |||||||||||| ||||||||||||||||||||||||    
T  3985889 ttgttgaagtttggggcctaactcatccttacaaaaccggcttgta 3985844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 4029632 - 4029677
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||    
T  4029632 ttgttgaaatttggggcctaactcatccttacaaaaccggtttgta 4029677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 21750591 - 21750546
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  21750591 ttgttgaaatttggggcctaactcatccttacaaaactggcttgta 21750546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 27177527 - 27177486
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  27177527 tgttgaaatttggggcctaaatcatccttacaaaaccggctt 27177486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 34715443 - 34715488
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  34715443 ttgttgaaatttggggcataactcatccttacaaaaccggcttgta 34715488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 41380839 - 41380794
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||    
T  41380839 ttgttgaaatttggggcctaactcaaccttacaaaaccggcttgta 41380794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 45443396 - 45443351
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  45443396 ttgttgaaatttggggcctaactcatccttaaaaaaccggcttgta 45443351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 4255625 - 4255581
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||    
T  4255625 tgttgaaatttggggcctaactcatccttgcaaaaccggcttgta 4255581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 4255852 - 4255808
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||    
T  4255852 tgttgaaatttgggtcctaactcatccttacaaaaccggcttgta 4255808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 21833639 - 21833595
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||    
T  21833639 tgttgaaatttggggcctaactcatccttacgaaaccggcttgta 21833595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 656 - 704
Target Start/End: Complemental strand, 27219448 - 27219400
Alignment:
Q  656 catttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  27219448 catttgttgaaatttggggcataagttatccttacaaaaccggcttgta 27219400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 37223860 - 37223816
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||||||||||| | |||||||||||||||||||    
T  37223860 tgttgaaatttggggcctaattctttcttacaaaaccggcttgta 37223816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 38300272 - 38300316
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||||    
T  38300272 tgttgaaatttgggacctaactcatccttacaaaaccggcttgta 38300316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 39956663 - 39956707
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||    
T  39956663 tgttgaaatttggagcctaactcatccttacaaaaccggcttgta 39956707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 50057144 - 50057100
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  50057144 tgttgaaatttggggcctaactcatccttacaaaactggcttgta 50057100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 13769285 - 13769324
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  13769285 aaatttggggcctaactcatccttacaaaaccagcttgta 13769324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 34710671 - 34710710
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  34710671 aaatttggggtctaactcatccttacaaaaccggcttgta 34710710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Complemental strand, 49477433 - 49477398
Alignment:
Q  669 ttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||| ||||||||||||||||||||||||    
T  49477433 ttggggcctaactcatccttacaaaaccggcttgta 49477398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Complemental strand, 49477640 - 49477605
Alignment:
Q  669 ttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||| ||||||||||||||||||||||||    
T  49477640 ttggggcctaactcatccttacaaaaccggcttgta 49477605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 35011772 - 35011734
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  35011772 tgttgaaatttggggcctaactcatccttacaaaaccgg 35011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 698
Target Start/End: Complemental strand, 35011979 - 35011941
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  35011979 tgttgaaatttggggcctaactcatccttacaaaaccgg 35011941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 700
Target Start/End: Original strand, 40230422 - 40230464
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggct 700  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  40230422 tttgttgaaatttggggcctaactcaaccttacaaaaccggct 40230464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 660 - 698
Target Start/End: Original strand, 50203846 - 50203884
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccgg 698  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  50203846 tgttgaaatttggggcctaactcatccttacaaaaccgg 50203884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 11414478 - 11414437
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||| ||||||| ||||||| |||||||||||||||||||||    
T  11414478 tgttgaaatttgaggcctaactcatccttacaaaaccggctt 11414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 33909821 - 33909866
Alignment:
Q  660 tgtttaaatttggg-gcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  33909821 tgttgaaatttgggagcctaactcatccttacaaaaccggcttgta 33909866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 358 - 423
Target Start/End: Original strand, 47895842 - 47895906
Alignment:
Q  358 aaataaaagttatttggacacacagctagattcataaaattgaaaagagaaatgatattaaatgat 423  Q
    |||||||| ||||||| |||||||  | |||| |||||||| ||||||||||||||||||| ||||    
T  47895842 aaataaaatttatttgaacacacacat-gattgataaaatttaaaagagaaatgatattaagtgat 47895906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 10453700 - 10453736
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  10453700 tttggagcctaactcatccttacaaaaccggcttgta 10453736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 19820517 - 19820561
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||    
T  19820517 tgttgaaatttgaggcctaactcatccttacaaaaccggtttgta 19820561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 20737135 - 20737091
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||| ||||| |||||||||||||    
T  20737135 tgttgaaatttggggcctaaatcatgcttactaaaccggcttgta 20737091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 22339856 - 22339812
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  22339856 tgttgaaattgggggcctaactcatccttacaaaaccgacttgta 22339812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 24539261 - 24539225
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| |||||||||||||| |||||||||    
T  24539261 tttggggcctaactcatccttacaaaatcggcttgta 24539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 29369906 - 29369862
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| |||||||||| |||||||||||||    
T  29369906 tgttgaaattcggggcctaactcatccttactaaaccggcttgta 29369862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 34356839 - 34356875
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  34356839 tttggggcataactcatccttacaaaaccggcttgta 34356875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 37058760 - 37058804
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||| |||||||| |||||||||||||||||| |||||    
T  37058760 tgttgaaattttgggcctaactcatccttacaaaaccggtttgta 37058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 37223690 - 37223646
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||| |||||| || |||||||||||||||||||||    
T  37223690 tgttgaaatttggagcctaactcttccttacaaaaccggcttgta 37223646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 38300741 - 38300785
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| |||||| |||||||||||||||||    
T  38300741 tgttgaaatttgaggcctaactcatccgtacaaaaccggcttgta 38300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 666 - 698
Target Start/End: Original strand, 39078676 - 39078708
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccgg 698  Q
    |||||||||||||| ||||||||||||||||||    
T  39078676 aatttggggcctaactcatccttacaaaaccgg 39078708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 40230628 - 40230672
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| ||| ||| ||||||||||||||||||||    
T  40230628 tgttgaaatttggggcttaactcaaccttacaaaaccggcttgta 40230672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Complemental strand, 44573429 - 44573397
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  44573429 gggcctaactcatccttacaaaaccggcttgta 44573397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 48407592 - 48407556
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  48407592 tttggggcataactcatccttacaaaaccggcttgta 48407556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 50338371 - 50338415
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||| ||||||||||||||||||||    
T  50338371 tgttgaaatttggggtctaactcaaccttacaaaaccggcttgta 50338415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 54591454 - 54591498
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| |||| |||||||||||||||||||    
T  54591454 tgttgaaatttggggtctaactcatgcttacaaaaccggcttgta 54591498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000004; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 42768322 - 42768367
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  42768322 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 42768367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 43195900 - 43195855
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43195900 ttgttgaaatttggggcctaactcatccttacaaaaccggcttgta 43195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 21214190 - 21214234
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  21214190 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 21214234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 32667298 - 32667254
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  32667298 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 32667254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 33985760 - 33985804
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  33985760 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 33985804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 902033 - 901994
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  902033 aaatttggggcctaactcatccttacaaaaccggcttgta 901994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 7877954 - 7877915
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  7877954 aaatttgggacctaattcatccttacaaaaccggcttgta 7877915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 17727514 - 17727475
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  17727514 aaatttggggcctaactcatccttacaaaaccggcttgta 17727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 653 - 704
Target Start/End: Complemental strand, 40010096 - 40010045
Alignment:
Q  653 tgacatttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||| |||||||||||||||  |||||||||||||||||||||||    
T  40010096 tgacttttgttgaaatttggggcctaacacatccttacaaaaccggcttgta 40010045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 3976466 - 3976504
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  3976466 aatttggggcctaactcatccttacaaaaccggcttgta 3976504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 3976998 - 3977036
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  3976998 aatttggggcctaactcatccttacaaaaccggcttgta 3977036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 25441812 - 25441767
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  25441812 ttgttgaaatttgggtcctaactcatccttacaaaaccggcttgta 25441767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 25621273 - 25621318
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  25621273 ttgttgaaattgggggcctaactcatccttacaaaaccggcttgta 25621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 34775473 - 34775428
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  34775473 ttgttgaaattgggggcctaactcatccttacaaaaccggcttgta 34775428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 883965 - 883921
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  883965 tgttaaaattgggggcctaactcatccttacaaaaccggcttgta 883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 5424771 - 5424815
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  5424771 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 5424815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 6183355 - 6183399
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  6183355 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 6183399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 12432013 - 12431969
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  12432013 tgttgaaatttggggcctagctcatccttacaaaaccggcttgta 12431969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 15372400 - 15372356
Alignment:
Q  406 gaaatgatattaaatgatttcactaaaatatttcttttaaatttt 450  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||    
T  15372400 gaaacgatattaaatgatttgactaaattatttcttttaaatttt 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 20998978 - 20999022
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  20998978 tgttgaaattgggggcctaactcatccttacaaaaccggcttgta 20999022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 23054441 - 23054397
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||    
T  23054441 tgttgaaatttggggcctaactcatccttacaaaaccgtcttgta 23054397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 25286257 - 25286293
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  25286257 tttggggcctaactcatccttacaaaaccggcttgta 25286293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 30160434 - 30160398
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  30160434 tttggggcctaactcatccttacaaaaccggcttgta 30160398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 669 - 704
Target Start/End: Original strand, 93136 - 93171
Alignment:
Q  669 ttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||| ||||||||||||||||||||||||    
T  93136 ttggggcctaactcatccttacaaaaccggcttgta 93171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 10429849 - 10429810
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  10429849 aaatttggggtctaactcatccttacaaaaccggcttgta 10429810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 11969162 - 11969123
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  11969162 aaattttgggcctaactcatccttacaaaaccggcttgta 11969123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 703
Target Start/End: Complemental strand, 25082734 - 25082691
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||    
T  25082734 tgttgaaatttggggcctaattcatccttagaaaaacggcttgt 25082691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 3435481 - 3435519
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  3435481 aatttggggcctaactcatccttacaaaaccggtttgta 3435519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 3976780 - 3976818
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  3976780 aatttggggcctaactcatccttacaaaactggcttgta 3976818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 391 - 462
Target Start/End: Complemental strand, 18906859 - 18906786
Alignment:
Q  391 ataaaattgaaaagagaaatgatattaaatgatttcactaaaatatt--tcttttaaattttctcattcatgta 462  Q
    |||||||| ||||||||| |||||||||||||| |   |||| ||||  ||||||||||||| |||||||||||    
T  18906859 ataaaatttaaaagagaattgatattaaatgatgtagttaaattatttatcttttaaattttgtcattcatgta 18906786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 19860154 - 19860108
Alignment:
Q  659 ttgtttaaatttgggg-cctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  19860154 ttgttgaaatttgggggcctaaatcatccttacaaaaccggcttgta 19860108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 704
Target Start/End: Complemental strand, 31761448 - 31761402
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||||||| ||| |||||||||||||| |||||||||    
T  31761448 tttgttgaaatttggggcttaactcatccttacaaaatcggcttgta 31761402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 883589 - 883634
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  883589 ttgttaaaattgggggcataactcatccttacaaaaccggcttgta 883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 25441963 - 25441918
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||| ||||| || |||||||||||||||||||||    
T  25441963 ttgttgaaatttgggtcctaactcgtccttacaaaaccggcttgta 25441918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 667 - 704
Target Start/End: Complemental strand, 32667085 - 32667048
Alignment:
Q  667 atttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  32667085 atttggggcctaactcatcattacaaaaccggcttgta 32667048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Original strand, 9889320 - 9889352
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  9889320 gggcctaactcatccttacaaaaccggcttgta 9889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 16007084 - 16007048
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  16007084 tttggggtctaactcatccttacaaaaccggcttgta 16007048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 29923413 - 29923370
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||    
T  29923413 tgttgaaatttggggcctaactcatccttac-aaaccggcttgta 29923370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 668 - 704
Target Start/End: Complemental strand, 30156315 - 30156279
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| | ||||||||||||||||||||||    
T  30156315 tttggggcctaacttatccttacaaaaccggcttgta 30156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 696
Target Start/End: Complemental strand, 31761247 - 31761211
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  31761247 tgttgaaatttggggcctaactcatccttacaaaacc 31761211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 9381015 - 9380971
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  9381015 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 9380971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 19481381 - 19481425
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  19481381 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 19481425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 20735637 - 20735593
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  20735637 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 20735593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 29273055 - 29273099
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  29273055 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 29273099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 29273214 - 29273258
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  29273214 tgttgaaatttggggcctaactcatccttacaaaaccggcttgta 29273258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 660 - 703
Target Start/End: Original strand, 2997045 - 2997088
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  2997045 tgttgaaatttggggcctaactcatccttacaaaaccggcttgt 2997088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 665 - 704
Target Start/End: Complemental strand, 15392135 - 15392096
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  15392135 aaatttggggcctaactcatccttacaaaaccggcttgta 15392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 704
Target Start/End: Complemental strand, 15392221 - 15392175
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||||||||||| |||||||||||||| |||||||||    
T  15392221 tttgttgaaatttggggcctaactcatccttacaaaatcggcttgta 15392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 22892682 - 22892720
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  22892682 aaatttggggcctaactcatccttacaaaaccggcttgt 22892720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 31305827 - 31305782
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||    
T  31305827 ttgttgaaatttggagcctaactcatccttacaaaaccggcttgta 31305782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 33879766 - 33879811
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  33879766 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgta 33879811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 33964489 - 33964444
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  33964489 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgta 33964444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 35926236 - 35926281
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  35926236 ttgttgaaatttggggcctaactcatccttacaaaaccagcttgta 35926281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 659 - 704
Target Start/End: Original strand, 48558309 - 48558354
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  48558309 ttgttgaaatttggggcttaactcatccttacaaaaccggcttgta 48558354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 463080 - 463116
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  463080 tttggggcctaactcatccttacaaaaccggcttgta 463116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 4022114 - 4022158
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  4022114 tgttgaaatttggggcctaactcatccttacaaaactggcttgta 4022158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 9381214 - 9381170
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||    
T  9381214 tgttgaaatttggggcctaactcatccttacaaagccggcttgta 9381170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 704
Target Start/End: Original strand, 11149420 - 11149456
Alignment:
Q  668 tttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||| ||||||||||||||||||||||||    
T  11149420 tttggggcctaactcatccttacaaaaccggcttgta 11149456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 17419902 - 17419858
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  17419902 tgttgaaatttggggtctaactcatccttacaaaaccggcttgta 17419858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 458
Target Start/End: Complemental strand, 23615560 - 23615462
Alignment:
Q  357 caaataaaagttatttggacacacagctagattcataaaattgaaaagagaaatgatattaaatgatttcactaaaata-tttcttttaaattttctcat 455  Q
    ||||||||| |||||||||||||||    |||| |||||||| |||||| |||||||||||| |||  | |||||| || ||||||||||||||| ||||    
T  23615560 caaataaaatttatttggacacacat---gattgataaaatttaaaagataaatgatattaagtga-gtgactaaattattttcttttaaattttatcat 23615465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 29272896 - 29272940
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||    
T  29272896 tgttgaaatttgaggcctaactcatccttacaaaaccggcttgta 29272940  T

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Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 672 - 704
Target Start/End: Complemental strand, 31789452 - 31789420
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||||||||||||||||||||||    
T  31789452 gggcctaattcatccttacaaaaccggcttgta 31789420  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 39649073 - 39649117
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  39649073 tgttgaaatttggggcataactcatccttacaaaaccggcttgta 39649117  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 43423394 - 43423350
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||||    
T  43423394 tgttaaaatttggggcctaactcatccttacaaaactggcttgta 43423350  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 46098592 - 46098548
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||||| |||||||| |||||||||||||||    
T  46098592 tgttaaaatttggggcctaactcatccttgcaaaaccggcttgta 46098548  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 52846838 - 52846882
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||| ||| ||||||||||||||||||||||||    
T  52846838 tgttgaaatttggggcttaactcatccttacaaaaccggcttgta 52846882  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 21538928 - 21538967
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  21538928 aaatttggggcctaaatcatccttacaaaaccggtttgta 21538967  T

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Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 27957803 - 27957842
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  27957803 aaatttggggtctaactcatccttacaaaaccggcttgta 27957842  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 35024454 - 35024493
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  35024454 aaatttggggcctaacccatccttacaaaaccggcttgta 35024493  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 665 - 703
Target Start/End: Original strand, 22892427 - 22892465
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgt 703  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  22892427 aaatttggggcctaactcatccttacaaaaccggattgt 22892465  T

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Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 670 - 704
Target Start/End: Original strand, 28509386 - 28509420
Alignment:
Q  670 tggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||| ||||||||||||||||||||||||    
T  28509386 tggggcctaactcatccttacaaaaccggcttgta 28509420  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 43361539 - 43361585
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||| |||| |||| ||||||||||||||||||||||||    
T  43361539 tttgttgaaattgggggtctaactcatccttacaaaaccggcttgta 43361585  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 654 - 704
Target Start/End: Complemental strand, 45264783 - 45264733
Alignment:
Q  654 gacatttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||||  ||| ||||||||||||||||||||||||    
T  45264783 gacagttgttgaaatttggggattaactcatccttacaaaaccggcttgta 45264733  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Original strand, 2997250 - 2997291
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||| ||||||||||||||| ||||| |||||||||||||||    
T  2997250 tgttgaaatttggggcctaactcatctttacaaaaccggctt 2997291  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 13959518 - 13959473
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||||||| |||||| |||||||    
T  13959518 ttgttgaaatttggggcctaactcatccttaaaaaaccagcttgta 13959473  T

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Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 659 - 704
Target Start/End: Complemental strand, 15013641 - 15013596
Alignment:
Q  659 ttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||| ||||||||||||||| ||||  ||||||||||||||||||    
T  15013641 ttgttgaaatttggggcctaactcatttttacaaaaccggcttgta 15013596  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 704
Target Start/End: Original strand, 20208109 - 20208138
Alignment:
Q  675 cctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||||||||||||||||||    
T  20208109 cctaattcatccttacaaaaccggcttgta 20208138  T

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Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 704
Target Start/End: Original strand, 20208408 - 20208437
Alignment:
Q  675 cctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||||||||||||||||||    
T  20208408 cctaattcatccttacaaaaccggcttgta 20208437  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 418
Target Start/End: Complemental strand, 23646856 - 23646796
Alignment:
Q  357 caaataaaagttatttggacacacagctagattcataaaattgaaaagagaaatgatattaa 418  Q
    ||||||||| |||||||||||||||  | |||| |||||||| |||||| ||||||||||||    
T  23646856 caaataaaatttatttggacacacacat-gattgataaaatttaaaagataaatgatattaa 23646796  T

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Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 701
Target Start/End: Complemental strand, 37600987 - 37600946
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggctt 701  Q
    |||| ||||||||||| ||| |||||||||||||||||||||    
T  37600987 tgttgaaatttggggcttaactcatccttacaaaaccggctt 37600946  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Original strand, 2104261 - 2104293
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  2104261 gggcctaactcatccttacaaaaccggcttgta 2104293  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 2697320 - 2697364
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| || |||||||||||||||||||||    
T  2697320 tgttgaaatttggggtctaactcgtccttacaaaaccggcttgta 2697364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 8520082 - 8520126
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| |||||||||| |||| ||||| ||||||||||||||||||    
T  8520082 tgttgaaatttggggtctaactcatctttacaaaaccggcttgta 8520126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 15391934 - 15391890
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||||||||| | ||||||||||||||| ||||||||    
T  15391934 tgttgaaatttggggccttactcatccttacaaaactggcttgta 15391890  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Original strand, 19937032 - 19937076
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| || |||||| ||||||||||||||||||||||||    
T  19937032 tgttgaaattcggtgcctaactcatccttacaaaaccggcttgta 19937076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 20735870 - 20735826
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  20735870 tgttgaaatttgaggcttaactcatccttacaaaaccggcttgta 20735826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 696
Target Start/End: Original strand, 21638255 - 21638291
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaacc 696  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  21638255 tgttgaaatttggggcctaactcatccttacaaaacc 21638291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 672 - 704
Target Start/End: Complemental strand, 36332215 - 36332183
Alignment:
Q  672 gggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||| ||||||||||||||||||||||||    
T  36332215 gggcctaactcatccttacaaaaccggcttgta 36332183  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 45403555 - 45403511
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||||| ||||||| |||||||||||||||| |||||||    
T  45403555 tgttgaaatttgaggcctaactcatccttacaaaaccagcttgta 45403511  T

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Target: scaffold0989 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 704
Target Start/End: Original strand, 2934 - 2980
Alignment:
Q  658 tttgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||| ||||||||||||||| |||||||||||||||| |||||||    
T  2934 tttgttgaaatttggggcctaactcatccttacaaaaccagcttgta 2980  T

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Target: scaffold1138 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 665 - 704
Target Start/End: Original strand, 2073 - 2112
Alignment:
Q  665 aaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  2073 aaatttggggcctaactcatccttacaaaactggcttgta 2112  T

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Target: scaffold0419 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Original strand, 4234 - 4272
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4234 aatttggggtctaactcatccttacaaaaccggcttgta 4272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 20649 - 20611
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  20649 aatttggggcctaactcatccttacaaaaccagcttgta 20611  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 666 - 704
Target Start/End: Complemental strand, 76961 - 76923
Alignment:
Q  666 aatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  76961 aatttggggcctaactcatctttacaaaaccggcttgta 76923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 660 - 704
Target Start/End: Complemental strand, 13421 - 13377
Alignment:
Q  660 tgtttaaatttggggcctaattcatccttacaaaaccggcttgta 704  Q
    |||| ||||| ||||||||| ||||||| ||||||||||||||||    
T  13421 tgttgaaattcggggcctaactcatcctcacaaaaccggcttgta 13377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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