View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2748_low_79 (Length: 269)
Name: NF2748_low_79
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2748_low_79 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 22 - 253
Target Start/End: Original strand, 5862164 - 5862392
Alignment:
| Q |
22 |
actcgtgaaggcagagttcgtatatttcatagtttaatatatttgtacttatgtagtccttgtcttacacttattgaaccctacagcatatatatctctc |
121 |
Q |
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||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5862164 |
actcgtgaaggcagagttcatatatttcagagtttaatatatttgtacttatgtagtccttgtcttacacttattgaaccctacagcatatatatctctc |
5862263 |
T |
|
| Q |
122 |
tgccttgtataaacacatatagtctcatgcaaaaagctttaagaaatatttaatattctcgaaataaattcatcgacct---caccactaggtagactca |
218 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
5862264 |
tgccttgtatatacacatatagtctcatgcaaaaagctttaagaaatatttaatattctcgaaataaattcatcgacctcaccaccactaggtagactca |
5862363 |
T |
|
| Q |
219 |
atgcatgaagatgaagctacctcaacattcttctt |
253 |
Q |
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|||| ||||||||||||||||||||||||| |
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| T |
5862364 |
atgc------atgaagctacctcaacattcttctt |
5862392 |
T |
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