View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2748_low_96 (Length: 247)

Name: NF2748_low_96
Description: NF2748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2748_low_96
NF2748_low_96
[»] chr1 (12 HSPs)
chr1 (1-246)||(45203639-45203884)
chr1 (20-141)||(27113976-27114097)
chr1 (42-139)||(33081872-33081969)
chr1 (22-141)||(27115843-27115962)
chr1 (32-100)||(35255798-35255866)
chr1 (86-141)||(40056690-40056745)
chr1 (22-138)||(23276128-23276244)
chr1 (80-139)||(40057732-40057791)
chr1 (91-141)||(47715138-47715188)
chr1 (21-138)||(27484996-27485113)
chr1 (22-75)||(44336249-44336302)
chr1 (22-138)||(11183123-11183239)
[»] chr2 (4 HSPs)
chr2 (22-141)||(36255733-36255852)
chr2 (29-142)||(36254950-36255063)
chr2 (107-141)||(20066819-20066853)
chr2 (21-141)||(19694172-19694292)
[»] chr6 (5 HSPs)
chr6 (22-141)||(8193229-8193348)
chr6 (80-143)||(8192283-8192346)
chr6 (22-141)||(32643541-32643660)
chr6 (103-142)||(34231722-34231761)
chr6 (84-140)||(33629460-33629516)
[»] chr8 (9 HSPs)
chr8 (23-141)||(5330435-5330553)
chr8 (82-141)||(5332670-5332729)
chr8 (22-141)||(28646267-28646386)
chr8 (22-141)||(28650851-28650970)
chr8 (85-142)||(28629217-28629274)
chr8 (85-141)||(22494814-22494870)
chr8 (89-143)||(5304231-5304285)
chr8 (92-138)||(31282263-31282309)
chr8 (103-141)||(35047093-35047131)
[»] scaffold0388 (2 HSPs)
scaffold0388 (22-142)||(13929-14049)
scaffold0388 (84-141)||(12942-12999)
[»] chr3 (10 HSPs)
chr3 (22-140)||(43263951-43264069)
chr3 (20-141)||(47443405-47443524)
chr3 (31-142)||(43268373-43268484)
chr3 (80-141)||(34209497-34209558)
chr3 (81-142)||(34208550-34208611)
chr3 (22-142)||(30256023-30256143)
chr3 (83-132)||(53273284-53273333)
chr3 (22-137)||(42756097-42756212)
chr3 (21-100)||(48888716-48888794)
chr3 (91-143)||(8397473-8397525)
[»] chr5 (7 HSPs)
chr5 (27-144)||(19228671-19228788)
chr5 (79-142)||(17046919-17046982)
chr5 (63-141)||(35926297-35926374)
chr5 (22-73)||(42539393-42539444)
chr5 (107-144)||(6628368-6628405)
chr5 (80-141)||(18848090-18848151)
chr5 (79-132)||(35776656-35776709)
[»] chr7 (6 HSPs)
chr7 (23-138)||(27453615-27453730)
chr7 (22-141)||(9494826-9494945)
chr7 (66-118)||(17741534-17741586)
chr7 (87-141)||(17747072-17747126)
chr7 (21-138)||(45361586-45361703)
chr7 (66-138)||(31873338-31873410)
[»] chr4 (2 HSPs)
chr4 (21-144)||(21472503-21472626)
chr4 (22-138)||(8109328-8109444)
[»] scaffold0181 (1 HSPs)
scaffold0181 (65-141)||(21025-21100)
[»] scaffold0192 (1 HSPs)
scaffold0192 (96-144)||(18992-19040)


Alignment Details
Target: chr1 (Bit Score: 166; Significance: 6e-89; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 45203639 - 45203884
Alignment:
Q  1 ttcaagtttaaagctccgcaattttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttact 100  Q
    |||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| | ||||||||||| || | ||||||||||||| |||||||    
T  45203639 ttcaagtttaaagctccgcagttttcctcggcagttaactgtagtcgtgtttgtaattgtttgacagttagctaccgcaggggcatttacgttttttact 45203738  T
Q  101 gatgtttttcagccttctcatatgtgtgaacaacaattttcattggaatagggactagtgctagtaatactctctttaacactttctaatactttatctc 200  Q
    | ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45203739 ggtgtttttcagctttctcatatatgtgaacaacaattttcattgaaatagggactagtgctagtaatactctctttaacactttctaatactttatctt 45203838  T
Q  201 ttgtaggataaaattcacctaggtctcaccatattgttcgagatcc 246  Q
    || ||||||||||||||| ||||||||||||| || | ||||||||    
T  45203839 ttataggataaaattcacgtaggtctcaccattttatacgagatcc 45203884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 27114097 - 27113976
Alignment:
Q  20 aattttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctc 119  Q
    |||||||| |||||||| | |  |||||||||| |||||  ||| |||||| ||||||| ||||||||||| |||||||||||||||| |||||||| ||    
T  27114097 aattttccacggcagtttactatagccgtgtttttaattcatcggcagttaactgccacaggggcatttacatcttttactgatgtttctcagccttttc 27113998  T
Q  120 atatgtgtgaacaacaattttc 141  Q
    |||||||| |||||||||||||    
T  27113997 atatgtgtcaacaacaattttc 27113976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 139
Target Start/End: Original strand, 33081872 - 33081969
Alignment:
Q  42 cagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattt 139  Q
    ||||| ||||| ||||| ||||||||||| || || |||||||||||||||||||||||| | |||||| |||||||||||| |||  ||||||||||    
T  33081872 cagccatgtttttaattcctcgacagttaactaccgcgggggcatttacgtcttttactggtatttttcggccttctcatatttgtatacaacaattt 33081969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 27115843 - 27115962
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||| ||||||||||| ||||||||  |||  |||| |||| || ||| ||||| |  ||  ||||||||||||||||| ||||| |||||||||||||    
T  27115843 ttttcttcggcagttaactgcagccggtttttaaattcctcggcaattaactgccgcatggatatttacgtcttttactggtgtttctcagccttctcat 27115942  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  27115943 atgtgtcaacaacaattttc 27115962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 35255866 - 35255798
Alignment:
Q  32 cagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttact 100  Q
    ||||||||||||||||  | | ||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  35255866 cagttaattgcagccgattctttaattcctcgacagttaactgccaagggggcatttacgtattttact 35255798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 40056745 - 40056690
Alignment:
Q  86 tttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    ||||| |||||||||||||||| ||||| ||||||||||||| |||| ||||||||    
T  40056745 tttacatcttttactgatgtttctcagctttctcatatgtgtcaacatcaattttc 40056690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 138
Target Start/End: Original strand, 23276128 - 23276244
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| || |||||  ||| ||||| |||  |||||| |||||  |||||||   |||| |||||||  ||||| |||||||| |||     
T  23276128 ttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaa 23276227  T
Q  122 atgtgtgaacaacaatt 138  Q
    ||| |||||||||||||    
T  23276228 atgcgtgaacaacaatt 23276244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 40057732 - 40057791
Alignment:
Q  80 ggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattt 139  Q
    |||||||||| |||||||| |||| ||| |||  |||||||||||||| |||||||||||    
T  40057732 ggggcatttatgtcttttattgatatttctcattcttctcatatgtgtcaacaacaattt 40057791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Original strand, 47715138 - 47715188
Alignment:
Q  91 gtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||| |||||| |||||||||| ||| ||||||||||||||| ||||    
T  47715138 gtcttttaatgatgtgtttcagccttatcacatgtgtgaacaacaaatttc 47715188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 27485113 - 27484996
Alignment:
Q  21 attttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctca 120  Q
    ||||| |||||||||||| ||||||||  ||| ||||| || | |||||| |||||  |||||||   |||| |||||||  ||||| |||||||| |||    
T  27485113 atttttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatca 27485014  T
Q  121 tatgtgtgaacaacaatt 138  Q
     ||||| ||||| |||||    
T  27485013 aatgtgggaacagcaatt 27484996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 44336302 - 44336249
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgc 75  Q
    ||||||||||||||||| ||||||||  ||| ||||| ||||||||||| ||||    
T  44336302 ttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 11183239 - 11183123
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||  ||| ||||| |||  |||||| ||| || ||| |||   |||| |||||||  | ||| |||||||| |||     
T  11183239 ttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttactcgtatttctcagccttatcaa 11183140  T
Q  122 atgtgtgaacaacaatt 138  Q
    |||||| ||||||||||    
T  11183139 atgtgtcaacaacaatt 11183123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 36255733 - 36255852
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| |||| |||||||| ||||| ||||||||||| ||||| | |||| ||||||||||||||||| ||||| |||||||||||||    
T  36255733 ttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccgcaggggaatttacgtcttttactggtgtttctcagccttctcat 36255832  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  36255833 atgtgtcaacaacaattttc 36255852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 36255063 - 36254950
Alignment:
Q  29 cggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtg 128  Q
    |||||||||| ||||||||  |||  |||| |||| || ||| || || | |||||||||||||||||||||| ||||| |||||||||||||||||||     
T  36255063 cggcagttaactgcagccgatttttaaattcctcggcaattaacttccgcaggggcatttacgtcttttactggtgtttctcagccttctcatatgtgtc 36254964  T
Q  129 aacaacaattttca 142  Q
    |||| |||||||||    
T  36254963 aacatcaattttca 36254950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Complemental strand, 20066853 - 20066819
Alignment:
Q  107 tttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||||||| ||||||||||||||||||||||    
T  20066853 tttcagccttcttatatgtgtgaacaacaattttc 20066819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 19694292 - 19694172
Alignment:
Q  21 attttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctca 120  Q
    ||||||||||| |||||| ||||||||  |||||  || ||||||||||| || |   ||||| ||||  || |||||||| ||||| |||||| | | |    
T  19694292 attttcctcggtagttaactgcagccggttttgttttttctcgacagttaactacagagggggtattttggtattttactggtgtttctcagccctataa 19694193  T
Q  121 tatgtgtgaacaacaattttc 141  Q
     ||||||||||| ||||||||    
T  19694192 catgtgtgaacagcaattttc 19694172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 8193229 - 8193348
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||||||| ||||| |||| |||||| ||||  | |||||||||||||||||||||| ||||| ||| |||||||||    
T  8193229 ttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgctgcaggggcatttacgtcttttactggtgtttctcaaccttctcat 8193328  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  8193329 atgtgtcaacaacaattttc 8193348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 8192346 - 8192283
Alignment:
Q  80 ggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttcat 143  Q
    ||||||||||| |||||||||| ||||| | ||| ||||||||||||| |||||||||||||||    
T  8192346 ggggcatttacttcttttactggtgtttctaagctttctcatatgtgtcaacaacaattttcat 8192283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 32643541 - 32643660
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||| ||||||| ||||||||  ||| ||||| || | |||||| |||||  || ||||||||||| |||||||  ||   |||| |||| | |     
T  32643541 ttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgtgggcttcaaccttatgaa 32643640  T
Q  122 atgtgtgaacaacaattttc 141  Q
    ||||||||||||||||||||    
T  32643641 atgtgtgaacaacaattttc 32643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 34231722 - 34231761
Alignment:
Q  103 tgtttttcagccttctcatatgtgtgaacaacaattttca 142  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  34231722 tgtttttcagccttataatatgtgtgaacaacaattttca 34231761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 33629460 - 33629516
Alignment:
Q  84 catttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaatttt 140  Q
    |||||||||||||| ||||||| |||||||||| | | | ||| |||||||||||||    
T  33629460 catttacgtctttttctgatgtgtttcagccttgttaaaagtgcgaacaacaatttt 33629516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 5330553 - 5330435
Alignment:
Q  23 tttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcata 122  Q
    |||||||| ||||||| | ||||||||||| ||||| ||||| ||||| ||||| | || ||||||||||||||||||||| ||| ||||||||||||||    
T  5330553 tttcctcgacagttaactacagccgtgtttttaattcctcgatagttaactgccgcaggagcatttacgtcttttactgatatttctcagccttctcata 5330454  T
Q  123 tgtgtgaacaacaattttc 141  Q
    ||||| |||||||||||||    
T  5330453 tgtgtcaacaacaattttc 5330435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 141
Target Start/End: Original strand, 5332670 - 5332729
Alignment:
Q  82 ggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    ||||||||| | |||||||| ||||| ||||||||||||||||||| |||||||||||||    
T  5332670 ggcatttacattttttactggtgtttctcagccttctcatatgtgtcaacaacaattttc 5332729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 28646267 - 28646386
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||  |||  |||| |||| || ||| ||||  | ||| |||||||||||||||||  ||||| ||| ||| |||      
T  28646267 ttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgctgcagggacatttacgtcttttacttgtgtttctcaacctcctcta 28646366  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  28646367 atgtgttaacaacaattttc 28646386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 28650851 - 28650970
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||  |||  |||| |||| || ||| ||||  | ||| |||||||||||||||||  ||||| ||| ||| |||      
T  28650851 ttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgctgcagggacatttacgtcttttacttgtgtttctcaacctcctcta 28650950  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  28650951 atgtgttaacaacaattttc 28650970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 28629274 - 28629217
Alignment:
Q  85 atttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttca 142  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||  |||||||| ||||    
T  28629274 atttacgtcttttactggtgtttctcaaccttctcatatgtgtcgacaacaatattca 28629217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 22494870 - 22494814
Alignment:
Q  85 atttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||| |||||||| ||||||||||||||||  || |||| |||||||||||||    
T  22494870 atttacgtattttactggtgtttttcagccttctgttaagtgtcaacaacaattttc 22494814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 5304231 - 5304285
Alignment:
Q  89 acgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttcat 143  Q
    |||| |||||||  |||||||||||||| ||| ||||||||||||||||| ||||    
T  5304231 acgtattttactcgtgtttttcagccttatcaaatgtgtgaacaacaattctcat 5304285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 31282263 - 31282309
Alignment:
Q  92 tcttttactgatgtttttcagccttctcatatgtgtgaacaacaatt 138  Q
    |||||||||||||||||||||| || | | |||||||||||||||||    
T  31282263 tcttttactgatgtttttcagctttatgacatgtgtgaacaacaatt 31282309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 141
Target Start/End: Complemental strand, 35047131 - 35047093
Alignment:
Q  103 tgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  35047131 tgtttctcagccttctcatatgtgtcaacaacaattttc 35047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 13929 - 14049
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    |||| |||||||||||| ||||||||||||| ||||| |||| |||||  ||||| | ||  ||||||| |||||||||| ||||| |||| ||||||||    
T  13929 tttttctcggcagttaactgcagccgtgtttttaatttctcggcagttcactgccgcaggaacatttacatcttttactggtgtttctcagtcttctcat 14028  T
Q  122 atgtgtgaacaacaattttca 142  Q
    || ||| ||||||||||||||    
T  14029 atatgtcaacaacaattttca 14049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 12999 - 12942
Alignment:
Q  84 catttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |||||    
T  12999 catttacgtcttttaccgatatttttcagccttctcatttgtgtcaacaacatttttc 12942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 140
Target Start/End: Complemental strand, 43264069 - 43263951
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    |||||||| |||  ||| ||||||||||||| |||||  ||| |||||| || ||  ||||||||||| ||||||||||| |||||||||||||||||||    
T  43264069 ttttcctcagcaaataactgcagccgtgtttttaattcatcggcagttaactaccgtgggggcatttatgtcttttactggtgtttttcagccttctcat 43263970  T
Q  122 atgtgtgaacaacaatttt 140  Q
    |||||   |||||||||||    
T  43263969 atgtgcttacaacaatttt 43263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 47443524 - 47443405
Alignment:
Q  20 aattttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctc 119  Q
    |||||||||||  |||||| |||| |||||||| ||||| |||| |||||| ||||| ||| ||||||||| ||||||||   || ||||||| ||||||    
T  47443524 aattttcctcgagagttaactgcatccgtgtttttaattcctcggcagttaactgccgcggaggcatttacatcttttacaagtg-ttttcag-cttctc 47443427  T
Q  120 atatgtgtgaacaacaattttc 141  Q
    ||||||||||||||||||||||    
T  47443426 atatgtgtgaacaacaattttc 47443405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 43268373 - 43268484
Alignment:
Q  31 gcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaa 130  Q
    |||||||| |||||||||| || ||||| ||||||||||| |||||  || ||||||||| |||||||||| ||||||||||  || | ||||||||  |    
T  43268373 gcagttaactgcagccgtgattttaattcctcgacagttaactgccgtggaggcatttacatcttttactggtgtttttcagttttataatatgtgtata 43268472  T
Q  131 caacaattttca 142  Q
    ||||||||||||    
T  43268473 caacaattttca 43268484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 34209497 - 34209558
Alignment:
Q  80 ggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||| |||| ||||||||    
T  34209497 ggggcatttacgtcttttactggtgtttctaagccttctcatatgtgtcaacatcaattttc 34209558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 34208611 - 34208550
Alignment:
Q  81 gggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttca 142  Q
    |||||||||| |||||||||  | ||| ||||||||||||||||||| ||||||||||||||    
T  34208611 gggcatttacatcttttactagtatttctcagccttctcatatgtgtcaacaacaattttca 34208550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 30256023 - 30256143
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||  ||| ||||| |||| |||||| || ||| ||||||||||| || |||||||  |||   ||||| || | |     
T  30256023 ttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtgtgcctcagctttatgaa 30256122  T
Q  122 atgtgtgaacaacaattttca 142  Q
    |||||| ||||||||||||||    
T  30256123 atgtgtcaacaacaattttca 30256143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 53273284 - 53273333
Alignment:
Q  83 gcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaaca 132  Q
    |||||| ||||||||||||||||||||||  |||||||||||||| ||||    
T  53273284 gcatttccgtcttttactgatgtttttcaatcttctcatatgtgtcaaca 53273333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 42756212 - 42756097
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| |||| |||  ||| ||||| ||||||||||| ||||   |||||||   |||| ||||||| |||||| | | |||| |||     
T  42756212 ttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttactcatgtttctgaaccttatcaa 42756113  T
Q  122 atgtgtgaacaacaat 137  Q
    |||||| |||||||||    
T  42756112 atgtgtcaacaacaat 42756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 48888794 - 48888716
Alignment:
Q  21 attttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttact 100  Q
    |||||||||||||||||| ||||||||  ||| ||||| |||| ||| || |||||  |||||||||||||| |||||||    
T  48888794 attttcctcggcagttaactgcagccggatttttaattcctcggcag-taactgccgagggggcatttacgtattttact 48888716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 8397525 - 8397473
Alignment:
Q  91 gtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttcat 143  Q
    ||||||||||| ||||||||||| || | | | ||||||||||||||||||||    
T  8397525 gtcttttactggtgtttttcagctttttaagaagtgtgaacaacaattttcat 8397473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 144
Target Start/End: Original strand, 19228671 - 19228788
Alignment:
Q  27 ctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtg 126  Q
    |||||||||||| |||| |||  ||| |||||  ||| |||||| |||||  |||||||||||||| |||||||  ||| | |||||||| ||| |||||    
T  19228671 ctcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtg 19228770  T
Q  127 tgaacaacaattttcatt 144  Q
    | ||||||||||||||||    
T  19228771 tcaacaacaattttcatt 19228788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 17046982 - 17046919
Alignment:
Q  79 gggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttca 142  Q
    ||||||||||  ||||||||  | ||||||||||| || |||||||||||||||||||||||||    
T  17046982 gggggcatttcagtcttttataggtgtttttcagctttttcatatgtgtgaacaacaattttca 17046919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 35926374 - 35926297
Alignment:
Q  63 gacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||| |||||  |||||| ||| ||||||||||  ||||||||||||||| ||| |||||||||||||| |||||    
T  35926374 gacagttaactgccgagggggctttt-cgtcttttacatatgtttttcagccttatcaaatgtgtgaacaacagttttc 35926297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 42539393 - 42539444
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagct 73  Q
    ||||||||||||||||| ||||||||  ||| ||||| ||||||||||||||    
T  42539393 ttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagct 42539444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 6628368 - 6628405
Alignment:
Q  107 tttcagccttctcatatgtgtgaacaacaattttcatt 144  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6628368 tttcagcctttgcatatgtgtgaacaacaattttcatt 6628405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 141
Target Start/End: Original strand, 18848090 - 18848151
Alignment:
Q  80 ggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    ||||||||| ||||||||||   |||||||||||| | |||||||||| ||||| |||||||    
T  18848090 ggggcattttcgtcttttacatgtgtttttcagccctatcatatgtgtcaacaataattttc 18848151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 35776709 - 35776656
Alignment:
Q  79 gggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaaca 132  Q
    |||||||||| ||||||||||  ||||||||||||| | |||||||||| ||||    
T  35776709 gggggcattttcgtcttttacatatgtttttcagccctatcatatgtgtaaaca 35776656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 27453615 - 27453730
Alignment:
Q  23 tttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcata 122  Q
    |||||||||||||||| ||||||||  ||| ||||| |||| |||||| |||||  |||||||    ||| ||||||| |||||| | |||||| ||| |    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgtttctaagccttatcaaa 27453714  T
Q  123 tgtgtgaacaacaatt 138  Q
    ||||||||||||||||    
T  27453715 tgtgtgaacaacaatt 27453730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 9494826 - 9494945
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| ||||||||  ||| ||||| |||| |||||| |||||  |||||||| ||| | |||||||  |||   |||||||| | |     
T  9494826 ttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgtgcctcagccttatgaa 9494925  T
Q  122 atgtgtgaacaacaattttc 141  Q
    |||||| |||||||||||||    
T  9494926 atgtgtcaacaacaattttc 9494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 17741534 - 17741586
Alignment:
Q  66 agttagctgccacgggggcatttacgtcttttactgatgtttttcagccttct 118  Q
    ||||| ||||| | ||||||||| ||||||||||||||||||||| |||||||    
T  17741534 agttaactgccgctggggcatttccgtcttttactgatgtttttcggccttct 17741586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 141
Target Start/End: Complemental strand, 17747126 - 17747072
Alignment:
Q  87 ttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||||||||||   ||| |||||||||||| || |||||||||||||||||||    
T  17747126 ttacgtcttttacatgtgtgtttcagccttcttatgtgtgtgaacaacaattttc 17747072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 45361703 - 45361586
Alignment:
Q  21 attttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctca 120  Q
    ||||| |||||||||||| ||||||||  ||| ||||| |||| |||||| |||||  ||| |||   || | ||||||| |||||| | |||||| |||    
T  45361703 atttttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagccttatca 45361604  T
Q  121 tatgtgtgaacaacaatt 138  Q
     ||||| |||||||||||    
T  45361603 aatgtgggaacaacaatt 45361586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 31873410 - 31873338
Alignment:
Q  66 agttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaatt 138  Q
    ||||| ||||| | || |||||| | ||||||||   |||||||||||||| |||||||||| ||||||||||    
T  31873410 agttaactgccgcaggagcattttcatcttttacatgtgtttttcagccttatcatatgtgtcaacaacaatt 31873338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 21472503 - 21472626
Alignment:
Q  21 attttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctca 120  Q
    |||||||||||||||||| ||||||||  |||  |||| |||| |||||| |||||  || ||||   |||| |||||||  ||||| |||||||| | |    
T  21472503 attttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatga 21472602  T
Q  121 tatgtgtgaacaacaattttcatt 144  Q
     |||||| ||||||||||||||||    
T  21472603 aatgtgtcaacaacaattttcatt 21472626  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 138
Target Start/End: Complemental strand, 8109444 - 8109328
Alignment:
Q  22 ttttcctcggcagttaattgcagccgtgtttgtaattgctcgacagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcat 121  Q
    ||||||||||||||||| || |||||  | | ||||| ||||||||||| || ||| ||||| |    ||| |||||||  ||||| |||||||| |||     
T  8109444 ttttcctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtattttactcgtgtttctcagccttatcaa 8109345  T
Q  122 atgtgtgaacaacaatt 138  Q
    ||||| |||||||||||    
T  8109344 atgtgggaacaacaatt 8109328  T

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Target: scaffold0181 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 141
Target Start/End: Complemental strand, 21100 - 21025
Alignment:
Q  65 cagttagctgccacgggggcatttacgtcttttactgatgtttttcagccttctcatatgtgtgaacaacaattttc 141  Q
    |||||| ||||| | ||||||||| |||| |||||   |||||||||||||||||| |||||| |||||||||||||    
T  21100 cagttaactgccgccggggcattt-cgtcatttacatgtgtttttcagccttctcaaatgtgtcaacaacaattttc 21025  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 18992 - 19040
Alignment:
Q  96 ttactgatgtttttcagccttctcatatgtgtgaacaacaattttcatt 144  Q
    |||||| ||||| ||||||||  ||||||||| ||||||||||||||||    
T  18992 ttactggtgtttctcagcctttgcatatgtgtcaacaacaattttcatt 19040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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