View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_high_45 (Length: 250)
Name: NF2749_high_45
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_high_45 |
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Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 240
Target Start/End: Complemental strand, 1796878 - 1796648
Alignment:
| Q |
10 |
ttatagtagtaaaactgatgtaaaaagttggtcaattgtgtacagctagcagattttatagtgttactgtacgtactttttacattagggtttgtaaaat |
109 |
Q |
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| T |
1796878 |
ttatagtagtaaaactgatgtaaaaagttggtcaattgtgtaaagctagcagattttatagtgttactgtacgtactttttacattagggtttgtaaaat |
1796779 |
T |
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| Q |
110 |
caatgtaataacgggcttatacgctggatattaactggtgttacaactcaaaaatatattagattaggaatttgattataacatttttactttatggatc |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
1796778 |
caatgtaataacgggcttatacgctggatattaactggtgttacaactcaaaaatatattagattaggaatttgattataacatttttattttatggatc |
1796679 |
T |
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| Q |
210 |
ggatattatatttaaaattttcaaatctgtg |
240 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
1796678 |
ggatattatatttaaaattttcaaatctgtg |
1796648 |
T |
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