View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_high_46 (Length: 243)
Name: NF2749_high_46
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 8150878 - 8151100
Alignment:
| Q |
1 |
cctagtccctagcctaattccaaaagcagcgaatggaacggaggaagtaaacagtgcgacagcgtgcatagcagcaagggtttagggtttagagtttgaa |
100 |
Q |
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| T |
8150878 |
cctagtccctaacctaattccaaaagcagcgaatggaacggaggaagtaaacagtgcgacaacgtgcatagcagcaagggtttagggtttagagtttgaa |
8150977 |
T |
|
| Q |
101 |
catatttcccttactannnnnnnnnnnnnnnnnnnncgaacatatttctacagaagcaagaaaagaaccaaaagaacaagactgctaaagcagtgagtta |
200 |
Q |
| |
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|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
8150978 |
catatttcccttactattttttttggtttattttttcgaacatatttctacagaagcaagaaaaaaaccaaaagaacaagactgctaaagcagtgagtta |
8151077 |
T |
|
| Q |
201 |
gcaacatcgtctcaaaaggacag |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
8151078 |
gcaacatcgtctcaaaaggacag |
8151100 |
T |
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