View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_high_48 (Length: 230)
Name: NF2749_high_48
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 22 - 212
Target Start/End: Original strand, 1412867 - 1413056
Alignment:
| Q |
22 |
agatgttgcagtaccaaagcaactaactttcacatcaacgagtttaaggatcttgaaagtttcacatccgatttaaacctcacatacatggatgaaacta |
121 |
Q |
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| T |
1412867 |
agatgttacagtaccaaagcaactaactttcacatcaacgagtttaaggatcttgaaagttccacatccgatttaaacctcacatacatggatgaaacta |
1412966 |
T |
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| Q |
122 |
tgaagtagtaaggggaagtggagaatcaagagttgccaatgccattgaaatatgacaataggaagacatttattttttgtaaagaaatgta |
212 |
Q |
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| T |
1412967 |
tgaagtagtaaggggaagtggagaatcaagagttgccaatgcca-tgaaatatgacaataggaagacacttattttttgtaaagaaatgta |
1413056 |
T |
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