View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_low_32 (Length: 367)
Name: NF2749_low_32
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_low_32 |
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Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 353
Target Start/End: Complemental strand, 46898120 - 46897768
Alignment:
| Q |
1 |
ttggagagtgatgaagttatcattacaaactattcctcatcaatgtttagatttgatgggcgatgagagacgttactattatcaaggccttacgaattag |
100 |
Q |
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| T |
46898120 |
ttggaaagtgatgaagttatcgttacaaactattcctcatcaatgtttagatttgatgggcgatgagagacgttactattgtcaaggccttacgaattag |
46898021 |
T |
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| Q |
101 |
ggaggatcaaaggttgtggtttagttccatatggtagatcatttgaggagcgggacttgagataatgacgaattataggccttgggtcagtccaaaatat |
200 |
Q |
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| T |
46898020 |
ggaggatcaaaggttgtggtttagttccatatggtagatcatttgagaagcggggcttgagataatgacgaattataggccttgggtcagtccaaaatat |
46897921 |
T |
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| Q |
201 |
cttacttttgaagaattgtagagacaaatatatcgaggtaacttcaannnnnnnaaagaaccaatcgcttctctaacatatattttttatttgcatggcc |
300 |
Q |
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| T |
46897920 |
cctacttttgaagaattgtagagacaaatatatcgaggtaacttcaatttttttaaagaactaatcgcttctctaacatatattttttatttgcatggcc |
46897821 |
T |
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| Q |
301 |
aaaattgatgagatagtgtgtagttgactgaattagaggaataaaataattga |
353 |
Q |
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| T |
46897820 |
aaaattgatgagatagtgtgtagttgactgaattagaggaataaaataattga |
46897768 |
T |
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