View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_low_44 (Length: 255)
Name: NF2749_low_44
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_low_44 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 45 - 255
Target Start/End: Original strand, 53308484 - 53308694
Alignment:
| Q |
45 |
atattttataagggaaaaattagtagtaatagttataggatttgtgtatactattaaatatgatcttgaaaaagtaaaactaagccacgagagtggggtg |
144 |
Q |
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| T |
53308484 |
atattttataagggaaaaattagtagtaatagttataggatttgagtatactattaaatatgatcttgaaaaagtaaaactaagccacgagagtggggtg |
53308583 |
T |
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| Q |
145 |
gattctagacatctatctgaccactcccgacatttgtgcttactacatgtacattttcatttctcaacatcaatcaaatatatatatgtatcatcaaata |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53308584 |
gattctagacatctatctgaccactcccgacatttgtgcttactacatgtacattttcatttctcaacatcaatcaaatatatatatgtatcatcaaata |
53308683 |
T |
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| Q |
245 |
tagtgccccag |
255 |
Q |
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| T |
53308684 |
tagtgccccag |
53308694 |
T |
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