View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2749_low_45 (Length: 253)
Name: NF2749_low_45
Description: NF2749
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2749_low_45 |
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Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 2128301 - 2128533
Alignment:
| Q |
1 |
cttacattttgttgcactcataatattgttaatctggttctcattttgctaaaaatttgttaacttttgcactataatttcggacaatgtacatagcctt |
100 |
Q |
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| T |
2128301 |
cttacattttgttgcactcataatattgttaatctggttctcattctgctaaaaatttgttaacttttgcactataatttcggacaatgtacgtagcctt |
2128400 |
T |
|
| Q |
101 |
agattccttccaaagcaacaatctaatttgaaagtgtcggacactaaatgtaaacatctcttttaactaaaattaaaatcatgattcgttatgttgtgaa |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
2128401 |
agattctttccaaagcaacaatctaatttgaaagtgtcggacactaaatgtaaacatctcttttaatcaaaattaaaatcatgattcgttatgttgtgaa |
2128500 |
T |
|
| Q |
201 |
aatctagttcattctgctagacccaaccccgtt |
233 |
Q |
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||||||||||||| ||||||||||||||||||| |
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| T |
2128501 |
aatctagttcattatgctagacccaaccccgtt |
2128533 |
T |
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