View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2750_high_17 (Length: 239)
Name: NF2750_high_17
Description: NF2750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2750_high_17 |
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Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 32591817 - 32592037
Alignment:
| Q |
1 |
cacaatgacagagtcactaagtaatttgaagataagtagttagagaagagatgaggaatttaaccaaacgagttgagcatttagagagagnnnnnnnnnn |
100 |
Q |
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| T |
32591817 |
cacaatgacagagccactaagtaatttgaagataagtagttagagaagagatgaggaatttaaccaaacgagttgagcatttagagagagtttttatttt |
32591916 |
T |
|
| Q |
101 |
nnnnnnnatagtttgaaaactaaattgatgaattttcttgatttaacgattactaactgtcatcttaacaagatagttagccaaggaggaatgatttagg |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |
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| T |
32591917 |
attttttatagtttgaaaactaaattgatgtattttcttgatttaaagattactaactgccatcttaacaagatagttagacaaggaggaatgatttagg |
32592016 |
T |
|
| Q |
201 |
gactaaattgacagcgtgatg |
221 |
Q |
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||||||||||||||||||||| |
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| T |
32592017 |
gactaaattgacagcgtgatg |
32592037 |
T |
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