View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2750_high_21 (Length: 205)
Name: NF2750_high_21
Description: NF2750
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2750_high_21 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 21 - 190
Target Start/End: Original strand, 43831010 - 43831179
Alignment:
| Q |
21 |
acaacttacaagtgtttgtgtttcaccaacaatgacacttttaacatatacacttctgtaaagttattgcacagtaatggnnnnnnnnataacagaaatg |
120 |
Q |
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| T |
43831010 |
acaacttacaagtgtttgtgtttcaccaacaatgacacttttaacatatacacttctgtaaagttattgcacagtaatggttttttttataacagaaatg |
43831109 |
T |
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| Q |
121 |
aaggtttaagataagaaccaagaaaattaatgcctcttttatatcctgcttaaacatattacattctctg |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43831110 |
aaggtttaagataagaaccaagaaaattaatgcctcttttatatcctgcttaaacatattacattctctg |
43831179 |
T |
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