View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2751_low_5 (Length: 510)
Name: NF2751_low_5
Description: NF2751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2751_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 405; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 9 - 495
Target Start/End: Original strand, 32343421 - 32343901
Alignment:
| Q |
9 |
cataggtaatagttaacattatgatgatcattgaactttgtaaaatatgtataggttagaaaaaagcttacaagaatatgagatacaagagaggtttgac |
108 |
Q |
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| T |
32343421 |
cataggtaatagttaacattatgatgatcattgaactttgtaaaatatgtataggttagaaaaaagcttacaagaatatgagatacaagagaggtttgac |
32343520 |
T |
|
| Q |
109 |
ctagtggcctgagacaagcatccaataattgtgtgactatagtaatgatagatatctgcagaaagagaagagaagtgggggaagtaagtgggttgcctaa |
208 |
Q |
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| T |
32343521 |
ctagtggcctgagacaagcatccaataattgtgtgactatagtaatgatagatatctgcagaaagagaagagaagtgggggaagtaagtgggttgcctaa |
32343620 |
T |
|
| Q |
209 |
gttccacacattcttgtgaataataacatggggattttggcatagtactgtagcatttacaattccaacttgcannnnnnnattgtatgannnnnnnnnn |
308 |
Q |
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| T |
32343621 |
gttccacacattcttgtgaataataacatgaggattttggcatagtactgtagcatttacaattccaacttgcatttttttattgtatga------atat |
32343714 |
T |
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| Q |
309 |
nnnnnngagtgaaggttgtaaaaatgaaacttatttcttctctttattgttcatagtatttttcccttaggagaagagaatgaaaaaagaggaaagagga |
408 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32343715 |
atatatgagtgaaggttgtaaaaatgaaacttatttcttctctttattgttcatagtatttttcccttaggagaagagaatgaaaaaagaggaaagagga |
32343814 |
T |
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| Q |
409 |
agaatgacagtgctctaaaataaaactacaaatctagattaaggtataagaggttaaccttatgttttggatataacataacatatt |
495 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32343815 |
agaatgacagtgctctaaaatagaactacaaatctagattaaggtataagaggttaaccttatgttttggatataacataacatatt |
32343901 |
T |
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