View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2752_high_10 (Length: 493)
Name: NF2752_high_10
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2752_high_10 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 446; Significance: 0; HSPs: 19)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 18 - 483
Target Start/End: Original strand, 6473471 - 6473936
Alignment:
| Q |
18 |
actagtgaagccgtgaatgcatactattcagcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattgg |
117 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6473471 |
actagtgaagccgtgaatgcatactattctgcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattgg |
6473570 |
T |
|
| Q |
118 |
aaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggtc |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
6473571 |
aaattcttgctgctaaaatgtggtggcatgtaaaagaaggagagaatctctatgaggaagattttacaaaagagaataggatgatgggagttctatggtc |
6473670 |
T |
|
| Q |
218 |
taacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagttttg |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6473671 |
taacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctgaagttttg |
6473770 |
T |
|
| Q |
318 |
ttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcat |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6473771 |
ttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaatagggaaggtgttgaagaaggatggaaaggttttgtctatgcat |
6473870 |
T |
|
| Q |
418 |
tgcaaggaatttatgataatgaaagtggattgaagaatataaaaagtttgaatagatttgatgatg |
483 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6473871 |
tgcaaggaatttatgataatgaaagtggattgaagaatataaaaagtttgaatagatttgatgatg |
6473936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 483
Target Start/End: Complemental strand, 6465083 - 6464618
Alignment:
| Q |
18 |
actagtgaagccgtgaatgcatactattcagcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattgg |
117 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||| | | ||| || || |||||||||||||||||||| |
|
|
| T |
6465083 |
actagtgaagctgtgaatgcatactattcagcagctttgatgggtttggcatatggcgacactcatctcgttgcagttggatcgacacttacatcattgg |
6464984 |
T |
|
| Q |
118 |
aaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggtc |
217 |
Q |
| |
|
|||||| ||| ||| ||||||||||||||||||||| ||||| ||| | || || || | |||| | ||||| |||| | || | || ||||| ||| | |
|
|
| T |
6464983 |
aaattcatgcagctcaaatgtggtggcatgtaaaaggtggagataatgtttacgacgaggtttttgcgaaagagaataaggtggttggtgttctttgggc |
6464884 |
T |
|
| Q |
218 |
taacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagttttg |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||| |||| |||||| || | || |
|
|
| T |
6464883 |
taacaagagagacagtggattatggtttgctcctcctgaatggaaagaatgtaggcttgggattcagctcttaccattgcttccaatttctgaattctta |
6464784 |
T |
|
| Q |
318 |
ttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcat |
417 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||||| ||||||||||| | |
|
|
| T |
6464783 |
ttttcaaatgttgattttgtgaaggaacttgtggagtggacattgcctgctttgaatagggaaggtgttggagaaggatggaaagggtttgtctatgcct |
6464684 |
T |
|
| Q |
418 |
tgcaaggaatttatgataatgaaagtggattgaagaatataaaaagtttgaatagatttgatgatg |
483 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||| |||| ||| |||||| | |||||||||| |
|
|
| T |
6464683 |
tggaaggagtttatgataatgaaagtggattgaagaagataagaagcttgaatggttttgatgatg |
6464618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 48 - 444
Target Start/End: Complemental strand, 6526091 - 6525695
Alignment:
| Q |
48 |
gcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattggaaattcttgctgctaaaatgtggtggcatg |
147 |
Q |
| |
|
||||| ||||| || |||||||| |||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
6526091 |
gcagccttgatgggaatggcatacgacgatgcagaactcgcagcgactgcatcgacacttgcatcatttgaaattcttgctgctaaaatgtggtggcatg |
6525992 |
T |
|
| Q |
148 |
taaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggtctaacaagagagacagtggattatggtttgc |
247 |
Q |
| |
|
||||||| |||| |||| | |||||| ||| |||| ||| | |||| ||| || || || || ||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
6525991 |
taaaagaaggagggaatatgtatgagaaagtgtttagtaaaaacaataagataattggtgtactttggtcgaacaaaagagacagtggtttatggtttgg |
6525892 |
T |
|
| Q |
248 |
tccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagttttgttttcagatgttgattatgtgaaggaactt |
347 |
Q |
| |
|
||| |||| ||||||||||||||||||||| ||||||||| |||||||| |||| |||||| |||| ||||| || |||||| |||||||||| |||| |
|
|
| T |
6525891 |
tccagctgaatggaaagaatgtaggcttgggattcagctcttaccattgcttccaatttctgaagtcttgttctctgatgttatgtatgtgaagggactt |
6525792 |
T |
|
| Q |
348 |
gtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcattgcaaggaatttatgataatgaaagtg |
444 |
Q |
| |
|
|||||||||||||| | ||||||||||||||| ||||||||||| || ||||| || ||||| ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
6525791 |
gtggagtggacattacctgctttaaaaagggatggtgttgaagagggttggaaggggtttgtttatgccttgcaagggatttatgataatgaaagtg |
6525695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 133 - 483
Target Start/End: Original strand, 6462364 - 6462714
Alignment:
| Q |
133 |
aaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggtctaacaagagagacag |
232 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || || |||| ||||| ||||||||||| || ||||| |||||| |||||||||||||||||||||| || |
|
|
| T |
6462364 |
aaatgtggtggcatataaaagaaggagataaactatatgcagaagagtttacaaaagagaacaggatcatgggatttctatggtctaacaagagagaaag |
6462463 |
T |
|
| Q |
233 |
tggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagttttgttttcagatgttgat |
332 |
Q |
| |
|
|||| | ||||||||||| ||| || | ||||||||| ||||||||||||||| |||||||| ||||||||||| |||| ||||| || |||||||| |
|
|
| T |
6462464 |
tggactttggtttgctccacctgaatatagagaatgtagacttggaattcagctcttaccattggttcctatttctgaagtattgttctctgatgttgaa |
6462563 |
T |
|
| Q |
333 |
tatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcattgcaaggaatttatg |
432 |
Q |
| |
|
||||||||| ||||||| || |||||||||| |||||| ||||| || ||||||||||||||||||||||| ||||| ||||| || ||||||||||||| |
|
|
| T |
6462564 |
tatgtgaagcaacttgttgaatggacattgcctgctttgaaaagagatggtgttgaagaaggatggaaagggtttgtatatgctttacaaggaatttatg |
6462663 |
T |
|
| Q |
433 |
ataatgaaagtggattgaagaatataaaaagtttgaatagatttgatgatg |
483 |
Q |
| |
|
|||| |||| || |||||||||||||| || ||| || |||||||||||| |
|
|
| T |
6462664 |
ataaggaaactgcattgaagaatataagaaatttaaaaggatttgatgatg |
6462714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 133 - 483
Target Start/End: Complemental strand, 6496308 - 6495958
Alignment:
| Q |
133 |
aaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggtctaacaagagagacag |
232 |
Q |
| |
|
|||||||||||||| ||||||| |||| || || |||| ||||| |||||||||| ||| |||| |||||| |||||||||| ||||||||||| || |
|
|
| T |
6496308 |
aaatgtggtggcatataaaagaaggaggaaaactatatgccgaagaatttacaaaagcgaatcggatcatgggatttctatggtccaacaagagagaaag |
6496209 |
T |
|
| Q |
233 |
tggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagttttgttttcagatgttgat |
332 |
Q |
| |
|
|||| | ||||||||||| | | || |||||||||||| ||||| |||||||| |||||||| ||||||||||| |||| ||||| || ||||| || |
|
|
| T |
6496208 |
tggactttggtttgctccaccggaatataaagaatgtagggttggagttcagctcttaccattgcttcctatttctgaagtattgttctctgatgtcgaa |
6496109 |
T |
|
| Q |
333 |
tatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcattgcaaggaatttatg |
432 |
Q |
| |
|
||||||||| ||||||| || ||| |||||| |||||| ||||| || ||||||||||||||||||||||| ||||| ||||| || ||||||||||||| |
|
|
| T |
6496108 |
tatgtgaagcaacttgttgaatgggcattgcctgctttgaaaagagatggtgttgaagaaggatggaaagggtttgtatatgccttacaaggaatttatg |
6496009 |
T |
|
| Q |
433 |
ataatgaaagtggattgaagaatataaaaagtttgaatagatttgatgatg |
483 |
Q |
| |
|
|||| |||| || |||||||||||||| || ||| || |||||||||||| |
|
|
| T |
6496008 |
ataaggaaaatgcattgaagaatataagaaatttaaaaggatttgatgatg |
6495958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 102 - 480
Target Start/End: Complemental strand, 6505146 - 6504765
Alignment:
| Q |
102 |
acacttacatcattggaaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatga |
201 |
Q |
| |
|
||||| ||||||||||||||||||| | ||||||||||||||||| || || | ||| | ||||| ||||| ||||||||||| ||||| || |
|
|
| T |
6505146 |
acactaacatcattggaaattcttggaaccaaaatgtggtggcatgttaagaagaatgggaaattgtatgaagaagagtttacaaaagagaatagaatag |
6505047 |
T |
|
| Q |
202 |
tgggagttctatggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcc |
301 |
Q |
| |
|
|||||||| | ||| ||| || ||||| |||||| | ||||||||||| ||| ||||| |||| |||| ||||||||||| |||||||| ||| |
|
|
| T |
6505046 |
tgggagttttgtggaataataaaagagatagtggactttggtttgctccacctgaatggagagaagctaggacaggaattcagcttataccattggctcc |
6504947 |
T |
|
| Q |
302 |
tatttctcaagttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaa---ggtgttgaagaaggatgg |
398 |
Q |
| |
|
||||||| ||| ||||||||| |||||||||||||| || || ||||| ||||||||||||| |||||| || |||||| ||||||| |||||||||| |
|
|
| T |
6504946 |
tatttctgaagatttgttttctgatgttgattatgttaaagatcttgttgagtggacattgcctgctttgaatagggaaggtggtgttggagaaggatgg |
6504847 |
T |
|
| Q |
399 |
aaaggttttgtctatgcattgcaaggaatttatgataatgaaagtggattgaagaatataaaaagtttgaatagatttgatg |
480 |
Q |
| |
|
|| || || | ||| ||||| |||||||||||||||||||||||| ||||||||| |||| ||| |||||| | ||||||| |
|
|
| T |
6504846 |
aagggattcttatattcattggaaggaatttatgataatgaaagtgcattgaagaagataagaagcttgaatggttttgatg |
6504765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 102 - 383
Target Start/End: Complemental strand, 6527859 - 6527578
Alignment:
| Q |
102 |
acacttacatcattggaaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatga |
201 |
Q |
| |
|
|||||| |||||||||||||| ||| | ||||||||||||||||| ||| ||| | || |||||||| ||||||||||||| || |||||||| | |
|
|
| T |
6527859 |
acacttgcatcattggaaatttgtgcagagaaaatgtggtggcatgttaaaaaggacggtaagctctatgaaaaagattttacaaaggagaataggatca |
6527760 |
T |
|
| Q |
202 |
tgggagttctatggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcc |
301 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| | |||||||||||||| ||||| |||| |||||||| |||| | |||| ||| || |
|
|
| T |
6527759 |
tgggagttttatggtctaacaagagagacagtggattgtcgtttgctccggctgaatggagagaagcaaggcttggtgttcaagttttacccttgtcgcc |
6527660 |
T |
|
| Q |
302 |
tatttctcaagttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggt |
383 |
Q |
| |
|
||||||| ||||||||||||| |||| | |||||||||||||| || || |||||||| | ||| ||||||||||||||| |
|
|
| T |
6527659 |
tatttctgaagttttgttttctgatgcaaagtatgtgaaggaactagttgaatggacattacctgccttaaaaagggaaggt |
6527578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 289 - 480
Target Start/End: Original strand, 6516812 - 6517003
Alignment:
| Q |
289 |
taccattgattcctatttctcaagttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttga |
388 |
Q |
| |
|
|||||||| ||| |||||| ||||||| ||||| ||||||||||||||||| |||||||| |||||| |||||| | |||| |||| | ||||| ||| |
|
|
| T |
6516812 |
taccattgtgtccaatttctgaagttttattttctgatgttgattatgtgaaagaacttgttgagtgggcattgcctcctttcaaaacgttaggtgctga |
6516911 |
T |
|
| Q |
389 |
agaaggatggaaaggttttgtctatgcattgcaaggaatttatgataatgaaagtggattgaagaatataaaaagtttgaatagatttgatg |
480 |
Q |
| |
|
| | |||||| || ||| ||||||||| |||||||||||||||||||||||| ||||||||| |||| ||| |||||| | ||||||| |
|
|
| T |
6516912 |
aaacagatggacgggatttcggtatgcattggaaggaatttatgataatgaaagtgcattgaagaagataagaagcttgaatggttttgatg |
6517003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 207 - 387
Target Start/End: Original strand, 1842372 - 1842552
Alignment:
| Q |
207 |
gttctatggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctattt |
306 |
Q |
| |
|
||||| ||||||||||| ||||||| ||| ||||||||| ||| |||| |||||||||||| |||| || ||||||||| ||||| | | ||||||| |
|
|
| T |
1842372 |
gttctgtggtctaacaaaagagaca-tggtctatggtttggtcctgctgagtggaaagaatgttggctcggcattcagctcttaccactactccctattt |
1842470 |
T |
|
| Q |
307 |
ctcaagttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattg-cttgctttaaaaagggaaggtgttg |
387 |
Q |
| |
|
|| || |||||| || |||||| | |||||||||| ||||||||||||||||||| ||| ||||| ||||||| ||||||| |
|
|
| T |
1842471 |
ctgaaattttgtcctctgatgttaagtatgtgaagggacttgtggagtggacattgcctttctttagaaagggatggtgttg |
1842552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 1842199 - 1842322
Alignment:
| Q |
17 |
cactagtgaagccgtgaatgcatactattcagcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattg |
116 |
Q |
| |
|
|||||| |||| |||||||||||||||||| ||||| ||||| |||| ||| | |||| ||||| |||| | |||||| ||||||||||||||| |
|
|
| T |
1842199 |
cactagcgaagtcgtgaatgcatactattctgcagccttgattcgtataatataagaagatgttgaacttgcagccattgcatcaacacttacatcattg |
1842298 |
T |
|
| Q |
117 |
gaaattcttgctgctaaaatgtgg |
140 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
1842299 |
gaaattcttgctgcaaaaatgtgg |
1842322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 207 - 313
Target Start/End: Original strand, 1832347 - 1832453
Alignment:
| Q |
207 |
gttctatggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctattt |
306 |
Q |
| |
|
||||| |||||| |||| ||||||||||| ||||||||| ||| |||| |||||||||||| |||| || ||||||||| ||||||| ||||||| | |
|
|
| T |
1832347 |
gttctttggtcttacaaaagagacagtggtctatggtttggtcctgctgagtggaaagaatgtcggctcggcattcagctcttaccatttcttcctatct |
1832446 |
T |
|
| Q |
307 |
ctcaagt |
313 |
Q |
| |
|
|| |||| |
|
|
| T |
1832447 |
cttaagt |
1832453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 148
Target Start/End: Original strand, 1828395 - 1828448
Alignment:
| Q |
95 |
tgcatcgacacttacatcattggaaattcttgctgctaaaatgtggtggcatgt |
148 |
Q |
| |
|
|||||| |||||| | ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1828395 |
tgcatcaacacttgcgtcattggaagttcttgctgctaaaatgtggtggcatgt |
1828448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 1822453 - 1822497
Alignment:
| Q |
95 |
tgcatcgacacttacatcattggaaattcttgctgctaaaatgtg |
139 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1822453 |
tgcatcaacacttacatcattggaaattctttctgctaaaatgtg |
1822497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 436
Target Start/End: Complemental strand, 6456928 - 6456705
Alignment:
| Q |
213 |
tggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaag |
312 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||| || ||| ||||| ||| |||||||| || ||||| | |||| ||| | ||||| | | | |
|
|
| T |
6456928 |
tggtctaataagagagatagtggactatggtttgcgcctgctcaatggagagagtgtaggctaggtattcaagttttacctttgttgcctatcaccgagg |
6456829 |
T |
|
| Q |
313 |
ttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaaggtgttgaagaaggatggaaaggttttgtcta |
412 |
Q |
| |
|
|||||||| ||||||| |||||| ||||| |||||||| |||||||| | | ||| || ||| ||||||||| ||||| |||||||||||| | || |
|
|
| T |
6456828 |
cattgttttcggatgttggttatgtaaaggagcttgtggaatggacattacctaatttgaataggaaaggtgttggtgaagggtggaaaggttttatata |
6456729 |
T |
|
| Q |
413 |
tgcattgcaaggaatttatgataa |
436 |
Q |
| |
|
||| || |||| | ||||||||| |
|
|
| T |
6456728 |
tgctatggaaggtacttatgataa |
6456705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 229
Target Start/End: Original strand, 6516612 - 6516746
Alignment:
| Q |
95 |
tgcatcgacacttacatcattggaaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaat |
194 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| | ||||||||||||||||| ||| || | ||| | ||||| ||||| ||||||||||| ||| |
|
|
| T |
6516612 |
tgcatcaacactaacatcattggaaattcttggaaccaaaatgtggtggcatgttaaaaagaatgggaaattgtatgatgaagagtttacaaaagagaat |
6516711 |
T |
|
| Q |
195 |
aggatgatgggagttctatggtctaacaagagaga |
229 |
Q |
| |
|
||||| ||||| || | ||||||| |||||||| |
|
|
| T |
6516712 |
aggatagtgggaattttgaggtctaataagagaga |
6516746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 436
Target Start/End: Original strand, 6521255 - 6521419
Alignment:
| Q |
272 |
gcttggaattcagctcctaccattgattcctatttctcaagttttgttttcagatgttgattatgtgaaggaacttgtggagtggacattgcttgcttta |
371 |
Q |
| |
|
|||||| |||||| | |||||||| |||||||||| || | |||||||| |||||||| | ||||||||| ||||||| ||| |||| || ||| |
|
|
| T |
6521255 |
gcttggcattcaggttttaccattgcttcctatttcagaaatgttgttttctgatgttgaatttgtgaaggatgttgtggaatgggtgttgcctgatttg |
6521354 |
T |
|
| Q |
372 |
aaaagggaaggtgttgaagaaggatggaaaggttttgtctatgcattgcaaggaatttatgataa |
436 |
Q |
| |
|
|||| || ||||||| ||||||||||| || ||||| ||||| || | |||||||||||||| |
|
|
| T |
6521355 |
gaaagtgatggtgttggtgaaggatggaagggatttgtgtatgctttaaagggaatttatgataa |
6521419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 1846173 - 1846220
Alignment:
| Q |
333 |
tatgtgaaggaacttgtggagtggacattgcttgctttaaaaagggaa |
380 |
Q |
| |
|
|||||||||| ||||||||||| |||||| |||||||| ||||||||| |
|
|
| T |
1846173 |
tatgtgaagggacttgtggagtcgacattacttgctttgaaaagggaa |
1846220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 275
Target Start/End: Original strand, 1836144 - 1836206
Alignment:
| Q |
213 |
tggtctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggctt |
275 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||| |||| |||||||||||| ||||| |
|
|
| T |
1836144 |
tggtctaacaaaagagacagtggtctatggtttggtccagctgagtggaaagaatgtcggctt |
1836206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 1847024 - 1847082
Alignment:
| Q |
238 |
tatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattg |
296 |
Q |
| |
|
||||||||| ||||||| |||||||||||| |||| |||||||||||| |||||||| |
|
|
| T |
1847024 |
tatggtttggtccggctcagtggaaagaatgtcggctcggaattcagctcttaccattg |
1847082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 321
Target Start/End: Complemental strand, 46383171 - 46382867
Alignment:
| Q |
18 |
actagtgaagccgtgaatgcatactattcagcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatca-ttg |
116 |
Q |
| |
|
||||||||| | |||||||||||||||| ||||| |||||| |||| |||||| |||||||||||||| ||| | ||| |||||||||||| || ||| |
|
|
| T |
46383171 |
actagtgaaactttgaatgcatactattctgcagctttgatcagtattgcatatgacgatgcagaactcgtagcaactgcttcgacacttacaccatttg |
46383072 |
T |
|
| Q |
117 |
gaaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatgatgggagttctatggt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| || |||| | ||||| ||| || | |||| |||| | | || || | || |||| |
|
|
| T |
46383071 |
gaaattcttgctgctaaaatgtggtggcatgtgaaaggaaaagtgaatatgtatgataaagtgttcagtgaagagaataaggtaattggtatactttggt |
46382972 |
T |
|
| Q |
217 |
ctaacaagagagacagtggattatggtttgctccggctgcatggaaagaatgtaggcttggaattcagctcctaccattgattcctatttctcaagtttt |
316 |
Q |
| |
|
||||||| ||||||||||| ||||||||| ||| ||| ||||| ||| |||| ||||| ||||||||| |||||||| ||||||||||| |||| || |
|
|
| T |
46382971 |
ctaacaaaagagacagtggtctatggtttggtccagctaagtggaaggaacgtagccttgggattcagctcttaccattgtttcctatttctgaagtctt |
46382872 |
T |
|
| Q |
317 |
gtttt |
321 |
Q |
| |
|
||||| |
|
|
| T |
46382871 |
gtttt |
46382867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 46383749 - 46383634
Alignment:
| Q |
31 |
tgaatgcatactattcagcagcgttgatcggtatggcatataacgatgcagaactcacagcgaatgcatcgacacttacatcattggaaattcttgctgc |
130 |
Q |
| |
|
||||||||||| |||| ||||| |||||| ||||| |||| || ||||||||||| |||| |||||||||||||||| ||||| || ||| ||| |
|
|
| T |
46383749 |
tgaatgcatacaattctgcagccttgatcaatatgggatatgacaatgcagaactcgtggcgactgcatcgacacttacacagttggatatcctttctg- |
46383651 |
T |
|
| Q |
131 |
taaaatgtggtggcatgt |
148 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
46383650 |
-aaaatgtggtggcatgt |
46383634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 3754632 - 3754692
Alignment:
| Q |
394 |
gatggaaaggttttgtctatgcattgcaaggaatttatgataatgaaagtggattgaagaa |
454 |
Q |
| |
|
|||||||||| ||| ||||| | |||||||||||||||||||| |||| || ||||||||| |
|
|
| T |
3754632 |
gatggaaagggtttatctattctttgcaaggaatttatgataaagaaaatgcattgaagaa |
3754692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 35244508 - 35244641
Alignment:
| Q |
102 |
acacttacatcattggaaattcttgctgctaaaatgtggtggcatgtaaaagagggagagaatctctatgaggaagattttacaaaagaaaataggatga |
201 |
Q |
| |
|
|||||| |||||||||||||| |||||||||| ||||||||||||| ||| || | | ||| | ||||| |||||||||||||||| |||||||| | |
|
|
| T |
35244508 |
acacttgcatcattggaaatttgtgctgctaaattgtggtggcatgttaaaaagagtggaaatatgtatgaaaaagattttacaaaagagaataggatca |
35244607 |
T |
|
| Q |
202 |
tgggagttctatggtctaacaagagagacagtgg |
235 |
Q |
| |
|
|||||||| | |||||||| ||||| || ||||| |
|
|
| T |
35244608 |
tgggagttttgtggtctaataagagggatagtgg |
35244641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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