View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2752_high_2 (Length: 715)

Name: NF2752_high_2
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2752_high_2
NF2752_high_2
[»] chr8 (6 HSPs)
chr8 (20-683)||(34866547-34867210)
chr8 (421-683)||(34389503-34389765)
chr8 (469-625)||(10551685-10551841)
chr8 (488-613)||(9519017-9519142)
chr8 (470-575)||(37987529-37987634)
chr8 (604-657)||(31210604-31210656)
[»] chr7 (6 HSPs)
chr7 (426-673)||(38305574-38305821)
chr7 (467-673)||(3420159-3420365)
chr7 (492-657)||(47326387-47326551)
chr7 (451-592)||(38484915-38485055)
chr7 (493-626)||(37792712-37792845)
chr7 (536-592)||(12480298-12480355)
[»] chr4 (7 HSPs)
chr4 (426-682)||(30963777-30964033)
chr4 (451-667)||(35799957-35800173)
chr4 (494-608)||(16501154-16501268)
chr4 (491-612)||(31051212-31051333)
chr4 (536-590)||(46699512-46699566)
chr4 (549-587)||(4305075-4305113)
chr4 (522-624)||(38929125-38929227)
[»] chr1 (5 HSPs)
chr1 (426-658)||(41919796-41920028)
chr1 (438-683)||(24685000-24685243)
chr1 (451-630)||(4651145-4651322)
chr1 (523-613)||(31586261-31586351)
chr1 (493-596)||(17032835-17032939)
[»] chr6 (4 HSPs)
chr6 (416-683)||(16510779-16511045)
chr6 (511-630)||(12793536-12793655)
chr6 (564-630)||(9223377-9223443)
chr6 (376-411)||(16511068-16511103)
[»] chr3 (6 HSPs)
chr3 (438-683)||(19175830-19176073)
chr3 (451-657)||(20611145-20611349)
chr3 (491-631)||(1653458-1653598)
chr3 (515-683)||(17501727-17501891)
chr3 (549-629)||(30935940-30936017)
chr3 (562-630)||(25595151-25595219)
[»] chr2 (6 HSPs)
chr2 (428-654)||(39339351-39339574)
chr2 (513-652)||(31902906-31903044)
chr2 (517-630)||(2062247-2062360)
chr2 (523-630)||(22886030-22886137)
chr2 (491-630)||(27739128-27739268)
chr2 (527-592)||(29486398-29486463)
[»] chr5 (2 HSPs)
chr5 (491-590)||(27712379-27712478)
chr5 (470-575)||(697664-697769)


Alignment Details
Target: chr8 (Bit Score: 584; Significance: 0; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 584; E-Value: 0
Query Start/End: Original strand, 20 - 683
Target Start/End: Complemental strand, 34867210 - 34866547
Alignment:
Q  20 taattttcattttgaattttatgggttaagatatggcatgtttatccacttctgtgataatatttttgaagccgtgaggactctttgcttgtagtatttt 119  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34867210 taattttcattttgaattttatgggttaagatatggcatggttatccacttctgtgatgatatttttgaagccgtgaggactctttgcttgtagtatttt 34867111  T
Q  120 tattgtgagtcattatagtcatcactcttcaaaattgttgcttaagtggcattgtgcatgctaaccagctgccatggaaatgccttatgtgtttcaagaa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34867110 tattgtgagtcattatagtcatcactcttcaaaattgttgcttaagtggcattatgcatgctaaccggctgccatggaaatgccttatgtgtttcaagaa 34867011  T
Q  220 gcttctggaggtcaacgaaaaaacaaatctggtgtctagagttccttggaactagtttgtcagatttggtttgtcggataattgtggtggttcagctttt 319  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34867010 gcttctggaggtcaacgaaaaaacagatctggtgtctagagttccttggaactagttagtcagatttggtttgtcggataattgtggtggttcagctttt 34866911  T
Q  320 aatggattttaagagtggttcatgggttggattgcggtgctttggggtgagcttttgggtggtagtttaggttgtgtggtggtggtgatgtgagtaggtt 419  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34866910 aatggattttaagagtggttcatggattggattgcggtgctttggggtgagcttttgggtggtagtttaggttgtgtggtggtggtgatgtgagtaggtt 34866811  T
Q  420 gcgggtagtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgccttttt 519  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  34866810 gcgggtagtgttgttcaaatccgccatttttgctccaccattgattctcttttactacggcgacgaaaacattctccttgtcacaggcgaccgccttttt 34866711  T
Q  520 atgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctt 619  Q
    |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| | ||    
T  34866710 atgacctgggttgtggttccgcttcaaaccggcgtcgctgcccgtgttttgttgttggatttcgtcttcctctaaatttatgtttgtgttgttgcttgtt 34866611  T
Q  620 tcttggtgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34866610 tcttggtgaggatatttttgtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 34866547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 421 - 683
Target Start/End: Complemental strand, 34389765 - 34389503
Alignment:
Q  421 cgggtagtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgccttttta 520  Q
    |||| |||||| |||| ||| ||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||||| ||||| || | |    
T  34389765 cgggaagtgttattcagatctgccgtttttgctccaccattggttctcttttactacggcgacgaacacattctccttgtcacaggcagccgctttgtca 34389666  T
Q  521 tgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctcttt 620  Q
    |||||||||||||| |||||||||||| |||||||||| ||||||||||||||| | |||||||| |||||||||||||||| ||||||| ||| | |||    
T  34389665 tgatctgggttgtgcttccgcttcaaaccggcgtcgctgcccgtgttttgttgtggaatttcgtcctcctctagatttatgtttgtgttgttgcttgttt 34389566  T
Q  621 cttggtgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    |||||||||||| |||||| |||||||||||||| ||| ||||||||| ||| ||||||||||    
T  34389565 cttggtgaggatgttttggcggcgtagtgatgcaatgatggtggtggtaatgtgcggtggtga 34389503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 469 - 625
Target Start/End: Original strand, 10551685 - 10551841
Alignment:
Q  469 ttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttt 568  Q
    ||||||| ||||||| || |  ||||||||||||| | || | |||||||||||||| |||| ||| ||||||||||||||||||||||| |||||| ||    
T  10551685 ttttactccggtgacaaatgtcttctccttgtcaccgacgacagcctttttatgatcggggtcgtgtttccgcttcaaatcggcgtcgctgcccgtgctt 10551784  T
Q  569 tgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttgg 625  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||| || ||||||||    
T  10551785 tgttgttgggtttcgtcttcctctagatctatgtttgtgttgctgtctatttcttgg 10551841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 613
Target Start/End: Original strand, 9519017 - 9519142
Alignment:
Q  488 gcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtctt 587  Q
    ||||||||||||||| ||| |||  | || |||  || ||||||||| | |||||||||| | |||||||| |||||||||||||||||| |||||||||    
T  9519017 gcattctccttgtcaaaggtggcaacattgttactatttgggttgtgttcccgcttcaaaccagcgtcgctgcccgtgttttgttgttgggtttcgtctt 9519116  T
Q  588 cctctagatttatgtctgtgttgctg 613  Q
     |||||||||| ||| ||| ||||||    
T  9519117 tctctagatttgtgtttgtattgctg 9519142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 470 - 575
Target Start/End: Complemental strand, 37987634 - 37987529
Alignment:
Q  470 tttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgtttt 569  Q
    |||||| ||||| || |||| ||||||||||||| |||||  || | |||| ||||| ||||| | |||||||||| | |||||||||| |||||||| |    
T  37987634 tttacttcggtgccggaagccttctccttgtcaccggcgggtgcgtgtttacgatctaggttgagtttccgcttcagaccggcgtcgctgcccgtgttat 37987535  T
Q  570 gttgtt 575  Q
    ||||||    
T  37987534 gttgtt 37987529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 657
Target Start/End: Complemental strand, 31210656 - 31210604
Alignment:
Q  604 tgtgttgctgcctctttcttggtgaggatattttggtggcgtagtgatgcagtg 657  Q
    ||||||||||||| ||||||||||| |||  ||||| |||||||||||||||||    
T  31210656 tgtgttgctgcctgtttcttggtgacgat-gtttggcggcgtagtgatgcagtg 31210604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 3e-87; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 426 - 673
Target Start/End: Original strand, 38305574 - 38305821
Alignment:
Q  426 agtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatc 525  Q
    |||| |||||| |||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||| ||||||||| |||||||||||  |||||     
T  38305574 agtgctgttcatatccgccgtttttgctccaccattggctctcttttactacggcgacgaacgcattctcgttgtcacagtcggccgcctttaaatgata 38305673  T
Q  526 tgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttgg 625  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | ||||||||    
T  38305674 tgggttgtggttccgcttcaaaccggcgttgctgcctgtgttttgttgttggatttcgtcttcctctagattgatgtttgtgttgttgcttgtttcttgg 38305773  T
Q  626 tgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgc 673  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38305774 tgaggatgttttggtggcgtagtgatgcagtgacggtggtggtgatgc 38305821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 467 - 673
Target Start/End: Complemental strand, 3420365 - 3420159
Alignment:
Q  467 tcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgt 566  Q
    ||||||||||||| |||||| ||||||||| ||| ||||| | ||||||||||||||||| ||||||||||||||||| || |||||||||| | |||||    
T  3420365 tcttttactacggcgacgaacgcattctccctgttacaggagaccgcctttttatgatctaggttgtggttccgcttcgaaccggcgtcgctgctcgtgt 3420266  T
Q  567 tttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgaggatattttggtggcgtagtgatgcagtgacggtggtg 666  Q
    ||||||||| | ||||||||||||||| |||||||  ||||||| ||| | ||||||||||||||| |||||| | ||||||||||||||||| ||||||    
T  3420265 tttgttgtttggtttcgtcttcctctaaatttatgcatgtgttgttgcttgtttcttggtgaggatgttttggcgacgtagtgatgcagtgacagtggtg 3420166  T
Q  667 gtgatgc 673  Q
    |||||||    
T  3420165 gtgatgc 3420159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 492 - 657
Target Start/End: Complemental strand, 47326551 - 47326387
Alignment:
Q  492 tctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctc 591  Q
    |||||||||||| ||||||||||||| |||||| | ||||||| || | ||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  47326551 tctccttgtcaccggcggccgcctttctatgatttcggttgtgttttcacttcaaatcggtgtcgctgcccgtgttttgttgttggatttcctcttcctc 47326452  T
Q  592 tagatttatgtctgtgttgctgcctctttcttggtgaggatattttggtggcgtagtgatgcagtg 657  Q
    |||||  || | ||||||||||| | |||||||||||||||  ||||| |||||||||||||||||    
T  47326451 tagatcaatatttgtgttgctgcttgtttcttggtgaggat-gtttggcggcgtagtgatgcagtg 47326387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 451 - 592
Target Start/End: Original strand, 38484915 - 38485055
Alignment:
Q  451 gctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcg 550  Q
    |||||||||||| |||| ||||||| ||| |||  | |  ||||||||||||| | ||||| |||||||| |||  |||||||| |||||||||||| ||    
T  38484915 gctccaccattgtttctattttactccggcgacagatgtcttctccttgtcactgacggccacctttttacgatg-gggttgtgtttccgcttcaaaccg 38485013  T
Q  551 gcgtcgcttcccgtgttttgttgttggatttcgtcttcctct 592  Q
    |||||||| ||| |||||||||||  | ||||||||||||||    
T  38485014 gcgtcgctgcccatgttttgttgtcaggtttcgtcttcctct 38485055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 493 - 626
Target Start/End: Original strand, 37792712 - 37792845
Alignment:
Q  493 ctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctct 592  Q
    ||||||||||| ||||   ||||||||| ||| ||||||||| |||||||||||| |||||||| |  |||||||||| |||||| |||| |||| ||||    
T  37792712 ctccttgtcaccggcgattgcctttttacgatatgggttgtgtttccgcttcaaaccggcgtcgttgtccgtgttttgctgttgggtttcatctttctct 37792811  T
Q  593 agatttatgtctgtgttgctgcctctttcttggt 626  Q
     |||   ||| |||||||||| || |||||||||    
T  37792812 tgatccgtgtttgtgttgctgtctgtttcttggt 37792845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 536 - 592
Target Start/End: Original strand, 12480298 - 12480355
Alignment:
Q  536 ttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttc-gtcttcctct 592  Q
    |||| ||||||| |||||||||| | |||||||||||||||| |||| ||||||||||    
T  12480298 ttccacttcaaaccggcgtcgctgctcgtgttttgttgttggttttcagtcttcctct 12480355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 1e-80; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 426 - 682
Target Start/End: Original strand, 30963777 - 30964033
Alignment:
Q  426 agtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatc 525  Q
    |||| |||||| ||||||||||||| ||||||||||| ||||||||||||||   |||||| ||||||||||||||||||||| ||  ||||||||||||    
T  30963777 agtgctgttcagatccgccgttttttctccaccattggttctcttttactacaacgacgaacgcattctccttgtcacaggcgaccatctttttatgatc 30963876  T
Q  526 tgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttgg 625  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| | ||||||||    
T  30963877 tgggttgtggttccacttcaaaccggcgtcgatgcccgtgttttgtggttggatttcgtcttcctctagatttatgtttgtgttgttgcttgtttcttgg 30963976  T
Q  626 tgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtg 682  Q
    ||||||| |||||| |||||||| |   |||||||||||||||||||||||||||||    
T  30963977 tgaggatgttttggaggcgtagttacatagtgacggtggtggtgatgcgcggtggtg 30964033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 451 - 667
Target Start/End: Original strand, 35799957 - 35800173
Alignment:
Q  451 gctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcg 550  Q
    |||||||||||| ||||||| |||| |||||||| | || |||||||||| || | || ||||||||||| | | |||||| || ||||| |||||||||    
T  35799957 gctccaccattggttctcttgtactccggtgacggacgccttctccttgttaccgacgaccgcctttttacgttatgggttatgtttccgtttcaaatcg 35800056  T
Q  551 gcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgaggatattttggtggcgtagtga 650  Q
    |||||| | ||||||||||| |  | | |||||| || || ||||| | | | ||||||||||||| |||||||||| || | |||||| |||||||| |    
T  35800057 gcgtcgttgcccgtgttttgctaataggtttcgtttttctttagatatgtatttgtgttgctgcctgtttcttggtggggctgttttggcggcgtagtaa 35800156  T
Q  651 tgcagtgacggtggtgg 667  Q
    || ||||  ||||||||    
T  35800157 tgtagtggtggtggtgg 35800173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 494 - 608
Target Start/End: Original strand, 16501154 - 16501268
Alignment:
Q  494 tccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctcta 593  Q
    |||||||||| |||||||| |||| || ||| ||||||||| |||| ||||||| |||||||||| ||| |||| ||||||||| ||| |||||||||||    
T  16501154 tccttgtcaccggcggccgtctttatacgatttgggttgtgattccacttcaaaccggcgtcgctgcccatgttgtgttgttggttttagtcttcctcta 16501253  T
Q  594 gatttatgtctgtgt 608  Q
     |||| ||| |||||    
T  16501254 aatttgtgtttgtgt 16501268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 491 - 612
Target Start/End: Complemental strand, 31051333 - 31051212
Alignment:
Q  491 ttctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcct 590  Q
    |||||||||| |  || ||||||||||||| ||| |||||||||  ||||||||| | |||||||||| |||||||||||||||||| || | |||||||    
T  31051333 ttctccttgttatcggtggccgcctttttacgatttgggttgtgtgtccgcttcagaccggcgtcgctgcccgtgttttgttgttgggttacatcttcct 31051234  T
Q  591 ctagatttatgtctgtgttgct 612  Q
     ||||||| |||  ||||||||    
T  31051233 ttagatttgtgttggtgttgct 31051212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 536 - 590
Target Start/End: Complemental strand, 46699566 - 46699512
Alignment:
Q  536 ttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcct 590  Q
    ||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||    
T  46699566 ttccgcttcaaatcggcgtcgctgcccgtgtattgttgttggaattcatcttcct 46699512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 587
Target Start/End: Original strand, 4305075 - 4305113
Alignment:
Q  549 cggcgtcgcttcccgtgttttgttgttggatttcgtctt 587  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4305075 cggcgtcgctgcccgtgttttgttgttggatttcgtctt 4305113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 624
Target Start/End: Original strand, 38929125 - 38929227
Alignment:
Q  522 gatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttc 621  Q
    ||||| ||||||| |||||||||| | ||||||| || |||||||||||||||| | | || ||||||| | ||||||  | || |||| ||||| ||||    
T  38929125 gatctaggttgtgtttccgcttcagaccggcgtcactgcccgtgttttgttgttagttatcatcttccttttgatttagctttgggttgttgcctgtttc 38929224  T
Q  622 ttg 624  Q
    |||    
T  38929225 ttg 38929227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 2e-78; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 426 - 658
Target Start/End: Original strand, 41919796 - 41920028
Alignment:
Q  426 agtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatc 525  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||  ||||||||||||||||||| |||||| ||| ||||||    
T  41919796 agtgttgttcagatccgccgtttttgctccaccattggttctcttttactacggcaacgaacacattctccttgtcacaggctgccgccatttaatgatc 41919895  T
Q  526 tgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttgg 625  Q
    |||||||||||||||||||||| | |||||| | ||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||| | ||||||||    
T  41919896 tgggttgtggttccgcttcaaaccagcgtcgttgcccgtgttttgttgtgggatttcatcttcctctagatttatgtttgtgttgttgcttgtttcttgg 41919995  T
Q  626 tgaggatattttggtggcgtagtgatgcagtga 658  Q
    ||||||| |||||| ||||||||||||||||||    
T  41919996 tgaggatgttttggcggcgtagtgatgcagtga 41920028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 438 - 683
Target Start/End: Complemental strand, 24685243 - 24685000
Alignment:
Q  438 atccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggtt 537  Q
    ||||||| ||||||||||||||||| |||| ||||||||||| ||||||  |||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  24685243 atccgccatttttgctccaccattggttct-ttttactacggcgacgaacacattctccttgtcacaggcggccagctttttatgatatgggttgtggtt 24685145  T
Q  538 ccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgaggatatttt 637  Q
    | |||||||| |||||||||| ||||||||||||||||| |||| ||||  || ||||||||||| ||||||| ||| | |||||||||||||||  |||    
T  24685144 ctgcttcaaaccggcgtcgctgcccgtgttttgttgttgaattttgtctctctttagatttatgtttgtgttgttgcttgtttcttggtgaggat-gttt 24685046  T
Q  638 ggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    || |||||||||||||||||||  ||||||||||||||||||||||    
T  24685045 ggcggcgtagtgatgcagtgacaatggtggtgatgcgcggtggtga 24685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 451 - 630
Target Start/End: Original strand, 4651145 - 4651322
Alignment:
Q  451 gctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcg 550  Q
    ||||||||||||||||||||||||| ||| |||  | |  |||||||| |||| | |||| |||||||||  ||| | |||||  |||||||||||| ||    
T  4651145 gctccaccattgattctcttttactccggcgacagatgtcttctccttatcactgacggctgcctttttacaatcggagttgt--ttccgcttcaaaccg 4651242  T
Q  551 gcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgagg 630  Q
    | |||||| |  ||||||||||||| | |||||||||||||  ||| ||||| |||||||||| || |||||||||||||    
T  4651243 gtgtcgctgcttgtgttttgttgttaggtttcgtcttcctcatgatctatgtttgtgttgctgtctgtttcttggtgagg 4651322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 523 - 613
Target Start/End: Complemental strand, 31586351 - 31586261
Alignment:
Q  523 atctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctg 613  Q
    |||||||| ||| | |||||||| | |||||||||| |||||||||||||||||| ||||||||| |||| ||||| |||| |||||||||    
T  31586351 atctgggtcgtgttcccgcttcagaccggcgtcgctgcccgtgttttgttgttgggtttcgtctttctctggatttgtgtcagtgttgctg 31586261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 493 - 596
Target Start/End: Original strand, 17032835 - 17032939
Alignment:
Q  493 ctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgtttt-gttgttggatttcgtcttcctc 591  Q
    ||||||||||| ||||||| | ||||| ||||| |||||||| ||| |||||| | ||| ||| || || ||||||| ||||||||||||||||||||||    
T  17032835 ctccttgtcaccggcggccacatttttttgatcagggttgtgattctgcttcacaccggggtcactacctgtgtttttgttgttggatttcgtcttcctc 17032934  T
Q  592 tagat 596  Q
    |||||    
T  17032935 tagat 17032939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 2e-75; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 416 - 683
Target Start/End: Complemental strand, 16511045 - 16510779
Alignment:
Q  416 ggttgcgggtagtgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcct 515  Q
    |||| |||| |||| |||||| | ||||||||||||||||||||||| |||||||||||||||| || |||  |||||||||||||||| ||| | ||||    
T  16511045 ggttccgggaagtgctgttcagaaccgccgtttttgctccaccattgtttctcttttactacggagatgaacacattctccttgtcacaagcgactgcct 16510946  T
Q  516 ttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcc 615  Q
    ||||||||| ||||||||||||| |||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||     
T  16510945 ttttatgatatgggttgtggttctgcttcaaaccggcatcgctgcccgtgttttgttgttggatgtcgtcttcctctagatttatgtttgtgttgttgct 16510846  T
Q  616 tctttcttggtgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    | |||||||||||||||   |||| |||||||||||| ||||| ||||||||| ||||||||||||||    
T  16510845 tgtttcttggtgaggat-ggttggcggcgtagtgatgtagtgatggtggtggttatgcgcggtggtga 16510779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 511 - 630
Target Start/End: Original strand, 12793536 - 12793655
Alignment:
Q  511 cgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttg 610  Q
    |||||||||| ||| ||||||||| || |||||||||  ||||||| | ||||||||||| || |||||||||||||||||| ||| ||  | |||||||    
T  12793536 cgcctttttacgatatgggttgtgttttcgcttcaaactggcgtcgttgcccgtgttttggtgatggatttcgtcttcctctggatctaaatttgtgttg 12793635  T
Q  611 ctgcctctttcttggtgagg 630  Q
    ||| || |||||||||||||    
T  12793636 ctgtctgtttcttggtgagg 12793655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 630
Target Start/End: Original strand, 9223377 - 9223443
Alignment:
Q  564 tgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgagg 630  Q
    |||||||||||||||||||||||||||||  |||| ||| ||||||||  ||| |||||||||||||    
T  9223377 tgttttgttgttggatttcgtcttcctctgaatttgtgtttgtgttgcctcctgtttcttggtgagg 9223443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 411
Target Start/End: Complemental strand, 16511103 - 16511068
Alignment:
Q  376 gggtggtagtttaggttgtgtggtggtggtgatgtg 411  Q
    |||||| |||||||||||||||||||||||||||||    
T  16511103 gggtggcagtttaggttgtgtggtggtggtgatgtg 16511068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 4e-74; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 438 - 683
Target Start/End: Original strand, 19175830 - 19176073
Alignment:
Q  438 atccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggtt 537  Q
    ||||||||||||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19175830 atccgccgtttttgctccaccattggttct-ttttactacggcgacgaatgcattctccttgtcacaggcggctgcctttttatgatatgggttgtggtt 19175928  T
Q  538 ccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgaggatatttt 637  Q
    || ||||||| |||| ||||| |||||||||||||||||||||| |||| ||| ||||||||||| |||| || ||| | |||||||||||||||  |||    
T  19175929 cctcttcaaaccggcatcgctgcccgtgttttgttgttggattttgtctccctttagatttatgtttgtgctgttgcttgtttcttggtgaggat-gttt 19176027  T
Q  638 ggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    || |||||| ||||| |||||| |||||||||||||||||||||||    
T  19176028 ggcggcgtaatgatgtagtgacagtggtggtgatgcgcggtggtga 19176073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 451 - 657
Target Start/End: Original strand, 20611145 - 20611349
Alignment:
Q  451 gctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcg 550  Q
    |||||||||||| |||||||||||| ||  |||||| || | ||||||||||  ||||||||||||| |||||| | ||||||| || | ||||||| ||    
T  20611145 gctccaccattggttctcttttactccgccgacgaacgcct-ctccttgtcatcggcggccgcctttctatgattttggttgtgctttcacttcaaaccg 20611243  T
Q  551 gcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgaggatattttggtggcgtagtga 650  Q
     ||||||| | ||||||||||||||||||||| ||||| ||||||| ||| | ||||||| ||||| |||||||||||||||  ||||| ||| ||||||    
T  20611244 acgtcgctgctcgtgttttgttgttggatttcctcttcatctagatctatatttgtgttgatgcctgtttcttggtgaggat-gtttggcggcatagtga 20611342  T
Q  651 tgcagtg 657  Q
    |||||||    
T  20611343 tgcagtg 20611349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 491 - 631
Target Start/End: Complemental strand, 1653598 - 1653458
Alignment:
Q  491 ttctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcct 590  Q
    ||||||||||||| ||||||  |||| ||| ||||||||||||  || ||||||||| |||||||| | |||||||||||||||||||||||||||||||    
T  1653598 ttctccttgtcactggcggcaaccttgttacgatctgggttgtcttttcgcttcaaaccggcgtcgatgcccgtgttttgttgttggatttcgtcttcct 1653499  T
Q  591 ctagatttatgtctgtgttgctgcctctttcttggtgagga 631  Q
    | | |||||||| ||||||||||||| |||||| |||||||    
T  1653498 ccatatttatgtttgtgttgctgcctgtttcttcgtgagga 1653458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 515 - 683
Target Start/End: Complemental strand, 17501891 - 17501727
Alignment:
Q  515 tttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgc 614  Q
    |||||| ||||| ||||||| ||||||||||||  | ||||  |  ||||||||||||||| |||||||||||||||||||| ||| | ||||||||| |    
T  17501891 tttttacgatctaggttgtgtttccgcttcaaactgacgtcattgtccgtgttttgttgttagatttcgtcttcctctagatctatatttgtgttgcttc 17501792  T
Q  615 ctctttcttggtgaggatattttggtggcgtagtgatgcagtgacggtggtggtgatgcgcggtggtga 683  Q
    || ||| |||||||||||  |||||  |||||||||| ||||   ||||||||||||||| ||||||||    
T  17501791 ctattttttggtgaggat-gtttggcagcgtagtgatacagt---ggtggtggtgatgcgtggtggtga 17501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 30936017 - 30935940
Alignment:
Q  549 cggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgag 629  Q
    ||||||||||  ||||||||||||||||| |||||   |||||||||||||||| | ||||| || || ||||||||||||    
T  30936017 cggcgtcgctgtccgtgttttgttgttgggtttcg---tcctctagatttatgtttttgttgttgtctgtttcttggtgag 30935940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 630
Target Start/End: Complemental strand, 25595219 - 25595151
Alignment:
Q  562 cgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtgagg 630  Q
    ||||||||||||||   ||||||| |||||||||||| | | ||||||||||| | |||||||||||||    
T  25595219 cgtgttttgttgttatgtttcgtcatcctctagatttgtttttgtgttgctgcttgtttcttggtgagg 25595151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 1e-43; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 428 - 654
Target Start/End: Complemental strand, 39339574 - 39339351
Alignment:
Q  428 tgttgttcaaatccgccgtttttgctccaccattgattctcttttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctg 527  Q
    ||||||||| ||||||||||   |||||||||||| |||||||||||| ||  |||||| || | ||||||||||| ||||||||||||| |||||| |     
T  39339574 tgttgttcagatccgccgttac-gctccaccattggttctcttttactccgccgacgaacgcct-ctccttgtcaccggcggccgcctttctatgatttt 39339477  T
Q  528 ggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttcttggtg 627  Q
    ||||||| || | ||||||| || ||||||| | ||||||||||||||||||||| ||||||||||||| ||| | |||||||||| || ||||||||||    
T  39339476 ggttgtgttttcacttcaaaccgacgtcgctgctcgtgttttgttgttggatttcctcttcctctagatctatatttgtgttgctgtctgtttcttggtg 39339377  T
Q  628 aggatattttggtggcgtagtgatgca 654  Q
    |||||  ||||| ||||||||||||||    
T  39339376 aggat-gtttggcggcgtagtgatgca 39339351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 513 - 652
Target Start/End: Complemental strand, 31903044 - 31902906
Alignment:
Q  513 cctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgct 612  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  31903044 cctttttatgatctaggttgtgtttccgcttcaaaccggcgtcgctgcccgtgttttgttgttgggtttcgtcttcctctagatctatgttagtgttgct 31902945  T
Q  613 gcctctttcttggtgaggatattttggtggcgtagtgatg 652  Q
    |  | ||||||| ||||| || ||||| ||||||||||||    
T  31902944 gtttgtttcttgctgaggcta-tttggcggcgtagtgatg 31902906  T

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Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 517 - 630
Target Start/End: Original strand, 2062247 - 2062360
Alignment:
Q  517 tttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcct 616  Q
    |||| ||||||||||||| |||||||||| | |||||||||| |||||||||||||||||| || | |||| |||| ||| | ||| ||||| ||| ||     
T  2062247 tttacgatctgggttgtgtttccgcttcagaccggcgtcgctgcccgtgttttgttgttgggttgcatctttctcttgatctgtgtttgtgtagcttcca 2062346  T
Q  617 ctttcttggtgagg 630  Q
     |||||||||||||    
T  2062347 gtttcttggtgagg 2062360  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 630
Target Start/End: Complemental strand, 22886137 - 22886030
Alignment:
Q  523 atctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctctagatttatgtctgtgttgctgcctctttct 622  Q
    ||||||||| || |||||||||| |  |||||||||  ||||||||||||||||| |||| ||||||||| ||| | |  |||||||||||| | |||||    
T  22886137 atctgggttttgtttccgcttcagactggcgtcgctatccgtgttttgttgttgggtttcatcttcctcttgatatgtaactgtgttgctgcttgtttct 22886038  T
Q  623 tggtgagg 630  Q
    ||||||||    
T  22886037 tggtgagg 22886030  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 630
Target Start/End: Original strand, 27739128 - 27739268
Alignment:
Q  491 ttctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcct 590  Q
    |||| ||||||||  | |||| |||||||  |||||| |||||| ||||||||||   || ||||||| || ||||||||||||| | |||| |||||||    
T  27739128 ttcttcttgtcactagtggccaccttttttcgatctgcgttgtgtttccgcttcagggcgacgtcgctgcctgtgttttgttgtttggtttcatcttcct 27739227  T
Q  591 ctagatttatg-tctgtgttgctgcctctttcttggtgagg 630  Q
    || ||||| || | ||||| ||||| | ||||||| |||||    
T  27739228 cttgatttgtgatttgtgtggctgcttgtttcttgatgagg 27739268  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 592
Target Start/End: Original strand, 29486398 - 29486463
Alignment:
Q  527 gggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcctct 592  Q
    |||||||| |||||||||| | |||||||||| |||  ||||||||||| | |||||||| |||||    
T  29486398 gggttgtgtttccgcttcagaccggcgtcgctgcccaagttttgttgtttggtttcgtctccctct 29486463  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 590
Target Start/End: Original strand, 27712379 - 27712478
Alignment:
Q  491 ttctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgttttgttgttggatttcgtcttcct 590  Q
    ||||||||||||| || ||  |||| |||| ||||| | ||||| |||  ||||| | |||||||| | |||||||||||||||||| |||| |||||||    
T  27712379 ttctccttgtcaccggtggttgcctgtttacgatctagattgtgtttctacttcagaccggcgtcgttgcccgtgttttgttgttgggtttcatcttcct 27712478  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 575
Target Start/End: Original strand, 697664 - 697769
Alignment:
Q  470 tttactacggtgacgaaagcattctccttgtcacaggcggccgcctttttatgatctgggttgtggttccgcttcaaatcggcgtcgcttcccgtgtttt 569  Q
    |||||| ||||| || |||| ||||||||||||| |||    |||| |||| ||||| ||||| | |||||||||| | |||||||||| |||||||  |    
T  697664 tttacttcggtgccggaagccttctccttgtcactggcatgtgcctgtttacgatctaggttgagtttccgcttcagaccggcgtcgctgcccgtgtgct 697763  T
Q  570 gttgtt 575  Q
    ||||||    
T  697764 gttgtt 697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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