View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2752_high_40 (Length: 233)
Name: NF2752_high_40
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2752_high_40 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 52584418 - 52584622
Alignment:
| Q |
13 |
gattattctcgtttgctgcaccaagtagatccatcaaatgtcttgtgtgactcatctcagaaccttgtgctagcccaatattgttagaaaatgttccaag |
112 |
Q |
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| T |
52584418 |
gattattctcgtttgctgcaccaagtagatccatcaaatgtcttgtgtgactcatctcagaaccttgtgctagcccaatattgttagaaaatgttccaag |
52584517 |
T |
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| Q |
113 |
tgattcatgatatgcattgttgtttctcaaagaagatgaaacataaccaccacctagtagttcttggttctcaaattgattttgatgggtcatggagttt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52584518 |
tgattcatgatatgcattgttgtttctcaaagaagatgaaacataaccaccacctagtagttcttggttctcaaattgattttgatgggtcatggagttt |
52584617 |
T |
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| Q |
213 |
gacat |
217 |
Q |
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||||| |
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| T |
52584618 |
gacat |
52584622 |
T |
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