View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2752_low_30 (Length: 299)
Name: NF2752_low_30
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2752_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 37315608 - 37315361
Alignment:
| Q |
1 |
atctgattccattccaagaattggttgcaattatttatgacaacaatgataataaataaaaatggaagagtgtcactttatatttacatttaagattagg |
100 |
Q |
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| T |
37315608 |
atctgattccattccaagaattggttgcaattatttatgacaacaatgataataaataaaaatggaagagtgtcactttatatttacatttaaaattagg |
37315509 |
T |
|
| Q |
101 |
agtctaaaaactcgtataaagatgaaaattgattgattagaacaagatgaaattaggagtctcaaaagtcaaaagaccaagtccatgtgggagttctatg |
200 |
Q |
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| T |
37315508 |
agtctaaaaactcgtataaagatgaaaattgattgatcagaacaagatgaaattaggagtctcaaaagtcaaaagaccaagtccatgtgggagttctatg |
37315409 |
T |
|
| Q |
201 |
taacgtatacctccacgtatcgtattgaaagagtaatggagtattatg |
248 |
Q |
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||||||||||||||||||||||||| |||| ||||||||||||||||| |
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| T |
37315408 |
taacgtatacctccacgtatcgtatcgaaaaagtaatggagtattatg |
37315361 |
T |
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