View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2752_low_31 (Length: 298)

Name: NF2752_low_31
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2752_low_31
NF2752_low_31
[»] chr3 (60 HSPs)
chr3 (122-293)||(2773408-2773579)
chr3 (178-286)||(2751559-2751667)
chr3 (7-61)||(35747802-35747856)
chr3 (5-61)||(15543109-15543165)
chr3 (5-61)||(29434411-29434467)
chr3 (5-61)||(44664731-44664787)
chr3 (5-61)||(49002383-49002439)
chr3 (7-61)||(2862851-2862905)
chr3 (7-61)||(11221142-11221196)
chr3 (7-61)||(25061450-25061504)
chr3 (5-59)||(28843844-28843898)
chr3 (7-61)||(50710813-50710867)
chr3 (7-61)||(50711018-50711072)
chr3 (5-61)||(11989625-11989681)
chr3 (7-59)||(18678063-18678115)
chr3 (5-61)||(20209298-20209354)
chr3 (5-61)||(21017069-21017125)
chr3 (5-61)||(46292692-46292748)
chr3 (7-61)||(2773306-2773360)
chr3 (7-61)||(13997067-13997121)
chr3 (7-61)||(15020383-15020437)
chr3 (7-61)||(18168864-18168918)
chr3 (7-61)||(39778429-39778483)
chr3 (7-61)||(44920008-44920062)
chr3 (7-61)||(45214527-45214581)
chr3 (7-61)||(45539982-45540036)
chr3 (6-59)||(11439912-11439965)
chr3 (5-58)||(44036799-44036852)
chr3 (246-287)||(5415268-5415310)
chr3 (7-61)||(6954107-6954161)
chr3 (7-61)||(44976903-44976957)
chr3 (7-61)||(45171728-45171782)
chr3 (5-59)||(45567556-45567610)
chr3 (18-58)||(27812728-27812768)
chr3 (5-61)||(43378278-43378334)
chr3 (116-171)||(6954254-6954309)
chr3 (174-244)||(2821033-2821103)
chr3 (130-176)||(2862698-2862744)
chr3 (7-61)||(14201906-14201960)
chr3 (7-61)||(38675131-38675185)
chr3 (5-59)||(40612379-40612433)
chr3 (130-184)||(50711266-50711320)
chr3 (130-171)||(11220994-11221035)
chr3 (122-171)||(11989517-11989566)
chr3 (122-171)||(13997180-13997229)
chr3 (126-171)||(14626403-14626448)
chr3 (122-171)||(26845153-26845202)
chr3 (122-171)||(31574516-31574565)
chr3 (130-171)||(35415513-35415554)
chr3 (122-171)||(36546104-36546153)
chr3 (122-171)||(36562161-36562210)
chr3 (130-171)||(39778550-39778591)
chr3 (130-171)||(45567410-45567451)
chr3 (138-171)||(48738309-48738342)
chr3 (116-184)||(21017182-21017250)
chr3 (139-179)||(28844012-28844052)
chr3 (139-171)||(44919899-44919931)
chr3 (122-170)||(44920161-44920209)
chr3 (130-170)||(53712254-53712294)
chr3 (139-171)||(53712527-53712559)
[»] scaffold0005 (1 HSPs)
scaffold0005 (7-61)||(257842-257896)
[»] chr7 (52 HSPs)
chr7 (7-61)||(2699767-2699821)
chr7 (7-61)||(19104423-19104477)
chr7 (5-61)||(8805854-8805910)
chr7 (5-61)||(8949402-8949458)
chr7 (5-61)||(45055432-45055488)
chr7 (6-61)||(31813879-31813934)
chr7 (7-61)||(12423995-12424049)
chr7 (7-61)||(17173199-17173253)
chr7 (7-61)||(20121355-20121409)
chr7 (7-61)||(24331489-24331543)
chr7 (7-61)||(41857251-41857305)
chr7 (7-61)||(42391406-42391460)
chr7 (7-61)||(44457894-44457948)
chr7 (5-58)||(7149404-7149457)
chr7 (5-61)||(11338040-11338096)
chr7 (5-61)||(41922392-41922448)
chr7 (5-61)||(45867593-45867649)
chr7 (5-61)||(46738412-46738468)
chr7 (5-61)||(49114419-49114475)
chr7 (5-55)||(34287664-34287714)
chr7 (7-61)||(41749730-41749784)
chr7 (7-61)||(43575212-43575266)
chr7 (9-58)||(21455667-21455716)
chr7 (5-61)||(31115946-31116002)
chr7 (7-58)||(31283267-31283318)
chr7 (7-61)||(7173081-7173135)
chr7 (7-61)||(23036797-23036851)
chr7 (7-61)||(38495064-38495118)
chr7 (7-61)||(45062212-45062266)
chr7 (9-59)||(46426813-46426863)
chr7 (7-61)||(47221857-47221911)
chr7 (9-58)||(11682074-11682123)
chr7 (5-58)||(49023726-49023779)
chr7 (122-170)||(11338155-11338203)
chr7 (8-55)||(21627084-21627131)
chr7 (116-171)||(47221709-47221764)
chr7 (129-171)||(21733338-21733380)
chr7 (121-171)||(31115839-31115889)
chr7 (130-176)||(49023574-49023620)
chr7 (130-171)||(20121208-20121249)
chr7 (130-171)||(21555893-21555934)
chr7 (130-171)||(23036649-23036690)
chr7 (130-171)||(24331381-24331422)
chr7 (130-171)||(34287518-34287559)
chr7 (130-171)||(41857411-41857452)
chr7 (116-177)||(43575058-43575119)
chr7 (122-171)||(45055324-45055373)
chr7 (130-170)||(2699888-2699928)
chr7 (139-171)||(7149571-7149603)
chr7 (122-170)||(8522575-8522623)
chr7 (130-170)||(8805747-8805787)
chr7 (5-61)||(43268077-43268133)
[»] chr5 (47 HSPs)
chr5 (7-61)||(7610413-7610467)
chr5 (7-61)||(24858513-24858567)
chr5 (5-61)||(3279336-3279392)
chr5 (5-61)||(13697466-13697522)
chr5 (5-61)||(14871844-14871900)
chr5 (5-61)||(16736913-16736969)
chr5 (5-61)||(32772139-32772195)
chr5 (5-61)||(40952178-40952234)
chr5 (7-61)||(2467209-2467263)
chr5 (7-61)||(7601743-7601797)
chr5 (7-61)||(39589726-39589780)
chr5 (5-58)||(2426342-2426395)
chr5 (5-61)||(1099040-1099096)
chr5 (5-61)||(13577411-13577467)
chr5 (5-61)||(18707380-18707436)
chr5 (5-61)||(33429643-33429699)
chr5 (6-61)||(2961043-2961098)
chr5 (6-61)||(2969511-2969566)
chr5 (7-61)||(1643689-1643743)
chr5 (7-61)||(12854725-12854779)
chr5 (7-61)||(13455786-13455840)
chr5 (5-61)||(33381539-33381595)
chr5 (7-61)||(19984370-19984424)
chr5 (7-61)||(22621197-22621251)
chr5 (5-55)||(37943641-37943691)
chr5 (7-61)||(42610891-42610945)
chr5 (130-171)||(2467061-2467102)
chr5 (130-171)||(13455945-13455986)
chr5 (130-171)||(24858405-24858446)
chr5 (5-61)||(2492812-2492867)
chr5 (5-61)||(3168203-3168259)
chr5 (5-61)||(3974361-3974417)
chr5 (139-171)||(8874346-8874378)
chr5 (9-61)||(19131022-19131074)
chr5 (131-171)||(19984534-19984574)
chr5 (116-171)||(12875925-12875980)
chr5 (130-184)||(12875653-12875707)
chr5 (130-176)||(31485954-31486000)
chr5 (11-61)||(31618321-31618371)
chr5 (7-61)||(37092329-37092383)
chr5 (122-171)||(3974215-3974264)
chr5 (130-171)||(7610533-7610574)
chr5 (7-48)||(8357188-8357229)
chr5 (130-183)||(12854564-12854617)
chr5 (130-171)||(30129746-30129787)
chr5 (116-176)||(3279445-3279505)
chr5 (123-171)||(15858255-15858303)
[»] chr4 (53 HSPs)
chr4 (7-61)||(52654082-52654136)
chr4 (7-59)||(5748025-5748077)
chr4 (5-61)||(26842910-26842966)
chr4 (5-61)||(41935603-41935659)
chr4 (5-61)||(46648217-46648273)
chr4 (7-61)||(7067392-7067446)
chr4 (7-61)||(16020067-16020121)
chr4 (7-61)||(18568175-18568229)
chr4 (7-61)||(22539837-22539891)
chr4 (7-61)||(32922177-32922231)
chr4 (5-59)||(35130908-35130962)
chr4 (5-59)||(45801366-45801420)
chr4 (7-61)||(46689307-46689361)
chr4 (7-61)||(52538029-52538083)
chr4 (5-58)||(32188062-32188115)
chr4 (5-61)||(25331965-25332021)
chr4 (5-61)||(26886758-26886814)
chr4 (7-59)||(41376696-41376748)
chr4 (5-61)||(44835121-44835177)
chr4 (7-61)||(17362448-17362502)
chr4 (7-61)||(45655843-45655897)
chr4 (122-170)||(9644755-9644803)
chr4 (5-61)||(39792065-39792121)
chr4 (7-61)||(24270512-24270566)
chr4 (7-61)||(38556052-38556106)
chr4 (5-58)||(18635988-18636041)
chr4 (5-61)||(10993735-10993791)
chr4 (122-170)||(39792182-39792230)
chr4 (130-170)||(41935496-41935536)
chr4 (5-61)||(44551025-44551081)
chr4 (116-171)||(16530320-16530375)
chr4 (116-171)||(45655949-45656004)
chr4 (4-55)||(46674707-46674758)
chr4 (5-47)||(9902801-9902843)
chr4 (7-61)||(15516416-15516469)
chr4 (7-61)||(32488734-32488788)
chr4 (129-171)||(45655695-45655737)
chr4 (116-170)||(53563380-53563434)
chr4 (122-171)||(10993627-10993676)
chr4 (138-171)||(21475533-21475566)
chr4 (130-171)||(37068687-37068728)
chr4 (5-58)||(37068762-37068814)
chr4 (130-171)||(41944168-41944209)
chr4 (138-171)||(44038152-44038185)
chr4 (130-171)||(46648294-46648335)
chr4 (129-162)||(50512499-50512532)
chr4 (131-171)||(9645043-9645083)
chr4 (9-61)||(16530428-16530480)
chr4 (5-61)||(23572749-23572805)
chr4 (129-169)||(23963118-23963158)
chr4 (139-171)||(26886890-26886922)
chr4 (5-61)||(30637056-30637112)
chr4 (7-59)||(49387333-49387385)
[»] chr2 (51 HSPs)
chr2 (7-61)||(1479177-1479231)
chr2 (7-61)||(42950669-42950723)
chr2 (5-61)||(1270257-1270313)
chr2 (5-61)||(9027135-9027191)
chr2 (5-61)||(11724727-11724783)
chr2 (5-61)||(17549217-17549273)
chr2 (5-61)||(23926539-23926595)
chr2 (5-61)||(26499521-26499577)
chr2 (5-61)||(29175072-29175128)
chr2 (5-61)||(30488190-30488246)
chr2 (7-61)||(341422-341476)
chr2 (7-61)||(44490454-44490508)
chr2 (5-61)||(1650651-1650707)
chr2 (5-61)||(9912060-9912116)
chr2 (5-61)||(10192233-10192289)
chr2 (7-59)||(11122794-11122846)
chr2 (9-61)||(16350702-16350754)
chr2 (9-61)||(22899129-22899181)
chr2 (5-61)||(29421841-29421897)
chr2 (5-61)||(31556895-31556951)
chr2 (9-61)||(35412029-35412081)
chr2 (5-61)||(42030687-42030743)
chr2 (6-61)||(3888981-3889036)
chr2 (7-58)||(33274547-33274598)
chr2 (4-58)||(15461402-15461456)
chr2 (7-61)||(22196073-22196127)
chr2 (5-61)||(20663819-20663875)
chr2 (7-58)||(13421187-13421238)
chr2 (7-61)||(10714158-10714212)
chr2 (7-61)||(11723816-11723870)
chr2 (138-171)||(22485996-22486029)
chr2 (122-171)||(33274660-33274709)
chr2 (123-171)||(1479280-1479328)
chr2 (130-170)||(22196194-22196234)
chr2 (21-61)||(22486160-22486200)
chr2 (9-61)||(28788977-28789029)
chr2 (139-170)||(14951704-14951735)
chr2 (140-171)||(20663759-20663790)
chr2 (116-175)||(22195922-22195981)
chr2 (129-171)||(29379782-29379824)
chr2 (7-61)||(40657450-40657504)
chr2 (130-171)||(3321998-3322039)
chr2 (28-61)||(3322164-3322197)
chr2 (130-179)||(9912184-9912233)
chr2 (122-171)||(10192086-10192135)
chr2 (130-171)||(29154334-29154375)
chr2 (130-171)||(29174924-29174965)
chr2 (130-171)||(33274397-33274438)
chr2 (130-170)||(17549071-17549111)
chr2 (130-170)||(28788870-28788910)
chr2 (139-171)||(38574898-38574930)
[»] scaffold0119 (1 HSPs)
scaffold0119 (5-61)||(41389-41445)
[»] chr8 (33 HSPs)
chr8 (5-61)||(33279084-33279140)
chr8 (5-61)||(42684898-42684954)
chr8 (7-61)||(17494833-17494887)
chr8 (7-61)||(34198945-34198999)
chr8 (7-61)||(39198727-39198781)
chr8 (7-61)||(148403-148457)
chr8 (5-58)||(41617188-41617241)
chr8 (5-61)||(29596550-29596606)
chr8 (7-61)||(8156858-8156912)
chr8 (5-59)||(18805893-18805947)
chr8 (7-61)||(40277332-40277386)
chr8 (5-46)||(29726652-29726693)
chr8 (122-171)||(33278937-33278986)
chr8 (5-61)||(36556683-36556739)
chr8 (5-48)||(26187276-26187319)
chr8 (129-171)||(26938454-26938496)
chr8 (7-61)||(27712914-27712968)
chr8 (7-61)||(28828326-28828380)
chr8 (7-61)||(30253736-30253790)
chr8 (122-171)||(148295-148344)
chr8 (28-61)||(12649590-12649623)
chr8 (130-183)||(18805736-18805789)
chr8 (130-171)||(30463916-30463957)
chr8 (130-171)||(36556806-36556847)
chr8 (130-170)||(148536-148576)
chr8 (138-170)||(7672643-7672675)
chr8 (139-171)||(10925105-10925137)
chr8 (9-61)||(30464066-30464118)
chr8 (139-171)||(33526942-33526974)
chr8 (130-170)||(34632496-34632536)
chr8 (139-171)||(41617050-41617082)
chr8 (122-170)||(42685051-42685099)
chr8 (5-61)||(43497317-43497373)
[»] chr6 (34 HSPs)
chr6 (5-61)||(685063-685119)
chr6 (5-61)||(22568911-22568967)
chr6 (7-61)||(2316639-2316693)
chr6 (5-59)||(9899343-9899397)
chr6 (7-61)||(20027923-20027977)
chr6 (5-61)||(9220251-9220307)
chr6 (5-61)||(9546521-9546577)
chr6 (5-61)||(13853252-13853308)
chr6 (5-61)||(17853753-17853809)
chr6 (6-61)||(24325102-24325157)
chr6 (7-61)||(3105714-3105768)
chr6 (7-61)||(8129683-8129737)
chr6 (7-61)||(8487972-8488026)
chr6 (7-61)||(13178333-13178387)
chr6 (5-58)||(25121610-25121663)
chr6 (9-61)||(3012023-3012075)
chr6 (5-61)||(21926174-21926230)
chr6 (116-179)||(13853136-13853199)
chr6 (5-59)||(1925264-1925318)
chr6 (7-61)||(2882993-2883047)
chr6 (7-55)||(28852338-28852386)
chr6 (122-170)||(32557400-32557448)
chr6 (139-170)||(3105607-3105638)
chr6 (7-61)||(2863690-2863744)
chr6 (7-60)||(12240630-12240684)
chr6 (130-168)||(28852459-28852497)
chr6 (130-171)||(12240482-12240523)
chr6 (130-171)||(13178494-13178535)
chr6 (122-171)||(24335535-24335584)
chr6 (122-171)||(25121528-25121577)
chr6 (130-171)||(28852190-28852231)
chr6 (130-170)||(685224-685264)
chr6 (130-170)||(22569034-22569074)
chr6 (5-61)||(25026085-25026141)
[»] chr1 (52 HSPs)
chr1 (5-61)||(10296702-10296758)
chr1 (5-61)||(17504153-17504209)
chr1 (7-61)||(9877553-9877607)
chr1 (7-61)||(27547092-27547146)
chr1 (7-61)||(40770290-40770344)
chr1 (7-61)||(44344134-44344188)
chr1 (5-58)||(4695084-4695137)
chr1 (5-61)||(12650032-12650088)
chr1 (5-61)||(45286380-45286436)
chr1 (9-61)||(46283554-46283606)
chr1 (7-61)||(730909-730963)
chr1 (7-61)||(8853205-8853259)
chr1 (7-61)||(26095639-26095693)
chr1 (7-61)||(40934568-40934622)
chr1 (5-59)||(48524603-48524657)
chr1 (5-58)||(39672949-39673002)
chr1 (5-61)||(1501629-1501685)
chr1 (5-61)||(24234647-24234703)
chr1 (5-61)||(33471559-33471615)
chr1 (6-58)||(48970849-48970901)
chr1 (5-61)||(49021814-49021870)
chr1 (116-179)||(17191192-17191255)
chr1 (7-61)||(3459745-3459799)
chr1 (7-61)||(5586637-5586691)
chr1 (7-61)||(5618181-5618235)
chr1 (7-61)||(32694458-32694512)
chr1 (5-59)||(43726317-43726371)
chr1 (130-171)||(9877406-9877447)
chr1 (122-171)||(45286234-45286283)
chr1 (5-61)||(8828689-8828745)
chr1 (130-170)||(40770143-40770183)
chr1 (7-58)||(45569154-45569205)
chr1 (116-171)||(50312008-50312063)
chr1 (116-182)||(5586744-5586810)
chr1 (7-61)||(6488982-6489036)
chr1 (7-61)||(8641055-8641109)
chr1 (7-61)||(25012798-25012852)
chr1 (7-61)||(35521331-35521384)
chr1 (122-184)||(44344012-44344074)
chr1 (7-53)||(50312155-50312201)
chr1 (126-171)||(730801-730846)
chr1 (122-171)||(9877666-9877715)
chr1 (130-171)||(17504314-17504355)
chr1 (130-171)||(29716425-29716466)
chr1 (130-171)||(32694579-32694620)
chr1 (130-171)||(35521478-35521519)
chr1 (130-171)||(40934418-40934459)
chr1 (130-170)||(16515905-16515945)
chr1 (139-171)||(27065147-27065179)
chr1 (122-170)||(40770403-40770451)
chr1 (122-170)||(40934681-40934729)
chr1 (130-170)||(48970968-48971008)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-61)||(258905-258959)
[»] scaffold0200 (1 HSPs)
scaffold0200 (5-61)||(4472-4528)
[»] scaffold0029 (1 HSPs)
scaffold0029 (7-61)||(73523-73577)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-58)||(108004-108057)
[»] scaffold0003 (2 HSPs)
scaffold0003 (20-61)||(323576-323617)
scaffold0003 (130-176)||(323419-323465)
[»] scaffold0592 (1 HSPs)
scaffold0592 (5-61)||(8536-8592)
[»] scaffold0077 (1 HSPs)
scaffold0077 (5-61)||(10029-10085)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 122 - 293
Target Start/End: Original strand, 2773408 - 2773579
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaattggcaaatgtatgagatacctgagtcgattgtttcttg 221  Q
    |||||||||||||||  |||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2773408 gaccaagttgttacctgaaattaagttaataaactaaaagtgtaattttgccttaattaaattggcaaatgtatgagatacctgagtcgattgtttcttg 2773507  T
Q  222 tgccaacgtggacagcaatttggatcctccatttacagctcaaagataacgtattttgttcttcatctcact 293  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2773508 tgccaatgtggacagcaatttggatcctccatttacagctcaaagataacgtattttgttcttcatttcact 2773579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 2751559 - 2751667
Alignment:
Q  178 ttaaattggcaaatgtatgagatacctgagtcgattgtttcttgtgccaacgtggacagcaatttggatcctccatttacagctcaaagataacgtattt 277  Q
    |||| ||| ||| |||||| ||||||||| || |||||||||||||  || |||||||| ||||  ||| ||||||||||||||||||||| ||||| ||    
T  2751559 ttaacttgacaactgtatgtgatacctgactcaattgtttcttgtgtgaaggtggacagaaattcagattctccatttacagctcaaagatgacgtaatt 2751658  T
Q  278 tgttcttca 286  Q
    |||||||||    
T  2751659 tgttcttca 2751667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35747856 - 35747802
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  35747856 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 35747802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 15543165 - 15543109
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  15543165 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 15543109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 29434467 - 29434411
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  29434467 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 29434411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 44664787 - 44664731
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  44664787 aatcttcaaatcaatgatcctcgtctatgtttgcataagaatattagatttgaagct 44664731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 49002383 - 49002439
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  49002383 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 49002439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 2862851 - 2862905
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  2862851 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 2862905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 11221142 - 11221196
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  11221142 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 11221196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 25061450 - 25061504
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  25061450 tcttcaaatctatgatcctcctctatgtttgcataagaatattagatttgaagct 25061504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 28843898 - 28843844
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  28843898 aatcttcaaatctatgatcctcatctatgtttgcataagaatattagatttgaag 28843844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 50710867 - 50710813
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  50710867 tcttcaaatctatgatccttgtctatgtttgcataagaatataagatttgaagct 50710813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 50711018 - 50711072
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  50711018 tcttcaaatctatgatcatcgtctatgtttgcataagaatataagatttgaagct 50711072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 11989681 - 11989625
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||    
T  11989681 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattatatttgaagct 11989625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 18678063 - 18678115
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  18678063 tcttcaaatctatgatcctcgtctatgtttgcataaaaatataagatttgaag 18678115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 20209298 - 20209354
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||    
T  20209298 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattttaagct 20209354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 21017069 - 21017125
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||    
T  21017069 aatcttcaaatctatgatcctcgtctatgtttgcataagagtattagatttgaagct 21017125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 46292748 - 46292692
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  46292748 aatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagct 46292692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 2773306 - 2773360
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||    
T  2773306 tcttcaaatttatgattctcgtctatgtttgcataagaatataagatttgaagct 2773360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 13997067 - 13997121
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| || |||||| ||||||||||||||||||||| ||||||||||||    
T  13997067 tcttcaaatctataatcctcgtctatgtttgcataagaatattagatttgaagct 13997121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 15020437 - 15020383
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  15020437 tcttcaaatctatgatcctcgtctatgtttgcataataatattagatttgaagct 15020383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 18168918 - 18168864
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  |||||| || ||||||||||||||||||||||||||||||||||    
T  18168918 tcttcaaatatatgatcttcgtctatgtttgcataagaatataagatttgaagct 18168864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 39778429 - 39778483
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||| ||||||||||||||||| ||||||||||||    
T  39778429 tcttcaaatctatgatcctcgtctttgtttgcataagaatattagatttgaagct 39778483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44920062 - 44920008
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||    
T  44920062 tcttcaaatctatgatccttgtctatgtttgcataagaatattagatttgaagct 44920008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45214527 - 45214581
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  45214527 tcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagct 45214581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45539982 - 45540036
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  45539982 tcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagct 45540036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 11439965 - 11439912
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    ||||||||||| |||||| || ||||||||||||||||||||| ||||||||||    
T  11439965 atcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaag 11439912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 44036852 - 44036799
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||    
T  44036852 aatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaa 44036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 287
Target Start/End: Original strand, 5415268 - 5415310
Alignment:
Q  246 tcctccat-ttacagctcaaagataacgtattttgttcttcat 287  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  5415268 tcctccatgttacagctcaaagataacgtattttgttcttcat 5415310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6954161 - 6954107
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||| |||||||||| ||||||||||||    
T  6954161 tcttcaaatctatgatccttgtctatgtttgtataagaatattagatttgaagct 6954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 44976903 - 44976957
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| |||||||||| |||||||||| ||||||||||||    
T  44976903 tcttcaaatttatgatcctcgtctatgtttgaataagaatattagatttgaagct 44976957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45171728 - 45171782
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| | ||||||| ||||| ||||||||||||||| ||||||||||||    
T  45171728 tcttcaaatctacgatcctcgtctatttttgcataagaatattagatttgaagct 45171782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 45567556 - 45567610
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||||    
T  45567556 aatcttcaaatctatgattctcgtctatgtttgcataaaaatattagatttgaag 45567610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 27812728 - 27812768
Alignment:
Q  18 atgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  27812728 atgatcctcgtctatgtttgcataagaatattagatttgaa 27812768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43378278 - 43378334
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||| ||||| | ||||||||||    
T  43378278 aatcttcaaatatatgatcctcgtctatgtttgcataacaatattatatttgaagct 43378334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 6954254 - 6954309
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| ||||||| |||||| | |||||||||||||| |||||||| ||||||||||    
T  6954254 ataaatgaccaaattgttatctaaaattaagttaagggactaaaagtgtaattttg 6954309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 2821033 - 2821103
Alignment:
Q  174 ttaattaaattggcaaatgtatgagatacctgagtcgattgtttcttgtgccaacgtggacagcaatttgg 244  Q
    |||||||| ||| ||| | ||||||||| |||| | |||||||||||||| ||| | ||||||||||||||    
T  2821033 ttaattaagttgacaattctatgagataactgacttgattgtttcttgtgtcaatgcggacagcaatttgg 2821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 2862744 - 2862698
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgactta 176  Q
    ||||||| |||||||||||||| |||||||| |||||||||| ||||    
T  2862744 tgttacctaaaattaagttaagggactaaaagtgtaattttgcctta 2862698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 14201960 - 14201906
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||| ||||| ||||| ||||||||||||    
T  14201960 tcttcaaatctatgatcatcgtctatgtttacataaaaatattagatttgaagct 14201906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 38675131 - 38675185
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||| ||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  38675131 tctttaaatctatgatcctcgtttatgtttgtataagaatattagatttgaagct 38675185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 40612433 - 40612379
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| |||||| || ||||||||||||||| ||| | ||||||||||    
T  40612433 aatcttcaaatctatgatcatcgtctatgtttgcataataattttagatttgaag 40612379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 50711266 - 50711320
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaatt 184  Q
    |||||||  ||||||||||||| |||||||| |||||||||| || |||||||||    
T  50711266 tgttacctgaaattaagttaagggactaaaagtgtaattttgcctaaattaaatt 50711320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 11221035 - 11220994
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  11221035 tgttacctaaaattaagttaagggactaaaagtgtaattttg 11220994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 11989566 - 11989517
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| || ||||| |||||||||||||| |||||||| ||||||||||    
T  11989566 gaccaaattattacctaaaattaagttaagggactaaaagtgtaattttg 11989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 13997180 - 13997229
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||| ||| |||||||||||||||||||    
T  13997180 gaccaaattgttacctgaaattaagtcaagggactaaaaatgtaattttg 13997229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 14626403 - 14626448
Alignment:
Q  126 aagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||| ||||| || |||||||||||||| ||||||||||    
T  14626403 aagttgttacctaaaataaaattaagagactaaaagtgtaattttg 14626448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 26845153 - 26845202
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| |||||||| ||||||||||| || |||||||| ||||||||||    
T  26845153 gaccaaattgttacctaaaattaagttgagggactaaaattgtaattttg 26845202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 31574516 - 31574565
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  31574516 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 31574565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 35415513 - 35415554
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  35415513 tgttacctgaaattaagttaagggactaaaaatgtaattttg 35415554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 36546153 - 36546104
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||  |||||||||||||||||||    
T  36546153 gaccaaattgttacctgaaattaagttaaaggactaaaaatgtaattttg 36546104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 36562161 - 36562210
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||  |||||||||||||||||||    
T  36562161 gaccaaattgttacctgaaattaagttaaaggactaaaaatgtaattttg 36562210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 39778550 - 39778591
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  39778550 tgttacctaaaattaagttaagggactaaaagtgtaattttg 39778591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 45567451 - 45567410
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  45567451 tgttacctaaaattaagttaagggactaaaagtgtaattttg 45567410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 48738309 - 48738342
Alignment:
Q  138 aaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||| |||||||||||||||||||    
T  48738309 aaaattaagttaagggactaaaaatgtaattttg 48738342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 21017182 - 21017250
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaatt 184  Q
    |||| |||||||  |||||||  |||||||||||||  ||||||| |||||||||| || |||||||||    
T  21017182 ataaatgaccaaactgttacctgaaattaagttaaggaactaaaagtgtaattttgcctaaattaaatt 21017250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 28844012 - 28844052
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttgacttaatt 179  Q
    ||||||||||||| |||||||| |||||||||| |||||||    
T  28844012 aaattaagttaagggactaaaagtgtaattttgccttaatt 28844052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 44919931 - 44919899
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  44919931 aaattaagttaagggactaaaaatgtaattttg 44919899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 44920161 - 44920209
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||| ||  ||||||||||||| ||||||||||||||||||    
T  44920161 gaccaaattgttgcctgaaattaagttaagggactaaaaatgtaatttt 44920209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 53712294 - 53712254
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  53712294 tgttacctaaaattaagttaagggactaaaactgtaatttt 53712254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 53712527 - 53712559
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  53712527 aaattaagttaagtgactaaaaatgtaattttg 53712559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 257842 - 257896
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  257842 tcttcaaatcaatgatcctcgtctatgtttgcataagaatataagatttgaagct 257896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 7e-18; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 2699767 - 2699821
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  2699767 tcttcaaatctatgatcctcttctatgtttgcataagaatattagatttgaagct 2699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 19104423 - 19104477
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  19104423 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 19104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8805910 - 8805854
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  8805910 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 8805854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8949458 - 8949402
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  8949458 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 8949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 45055488 - 45055432
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  45055488 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 45055432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 31813879 - 31813934
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  31813879 atcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 31813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 12423995 - 12424049
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  12423995 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 12424049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 17173253 - 17173199
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  17173253 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 17173199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20121355 - 20121409
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  20121355 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 20121409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 24331543 - 24331489
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  24331543 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 24331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 41857305 - 41857251
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  41857305 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 41857251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42391460 - 42391406
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  42391460 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 42391406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44457948 - 44457894
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  44457948 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 44457894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 7149457 - 7149404
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  7149457 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 7149404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 11338040 - 11338096
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  11338040 aatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 11338096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41922448 - 41922392
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||  ||||||||||||||||||||| ||||||||||||    
T  41922448 aatcttcaaatctatgatcctagtctatgtttgcataagaatattagatttgaagct 41922392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 45867593 - 45867649
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||    
T  45867593 aatcttcaaatctatgatcctcgtctatgtttgtataagaatattagatttgaagct 45867649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 46738412 - 46738468
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  46738412 aatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 46738468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 49114419 - 49114475
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||    
T  49114419 aatcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagct 49114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 34287664 - 34287714
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagattt 55  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  34287664 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagattt 34287714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 41749730 - 41749784
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||    
T  41749730 tcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagct 41749784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 43575212 - 43575266
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||    
T  43575212 tcttcaaatctatgatcctcgtctatgtttgcataagaatattatatttgaagct 43575266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 21455716 - 21455667
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  21455716 ttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 21455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 31115946 - 31116002
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| || |||||| ||||||||||||||||||||| | ||||||||||    
T  31115946 aatcttcaaatctatcatcctcgtctatgtttgcataagaatattatatttgaagct 31116002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 31283318 - 31283267
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||| ||| ||||| ||||||||||||||||||||| |||||||||    
T  31283318 tcttcaaatctatgttcctcgtctatgtttgcataagaatattagatttgaa 31283267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7173081 - 7173135
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||| | ||||||||||    
T  7173081 tcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagct 7173135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 23036797 - 23036851
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | ||||||||||||||||||| |||||| |||||    
T  23036797 tcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttaaagct 23036851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 38495064 - 38495118
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  38495064 tcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagct 38495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45062212 - 45062266
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  45062212 tcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagct 45062266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 46426813 - 46426863
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||| | ||||||||| ||||||||||||||||||||| ||||||||||    
T  46426813 ttcaaaactatgatcctcatctatgtttgcataagaatattagatttgaag 46426863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 47221857 - 47221911
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || |||||||||| |||||||||| ||||||||||||    
T  47221857 tcttcaaatctatgatcttcatctatgtttgtataagaatattagatttgaagct 47221911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 11682074 - 11682123
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||| || |||||| ||||||||||||||||||||| |||||||||    
T  11682074 ttcaaatctataatcctcatctatgtttgcataagaatattagatttgaa 11682123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 49023726 - 49023779
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| || ||| || ||||||||||||||||||||| |||||||||    
T  49023726 aatcttcaaatctataatcatcgtctatgtttgcataagaatattagatttgaa 49023779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 11338155 - 11338203
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  11338155 gaccaaattgttacctgaaattaagttaagggactaaaaatgtaatttt 11338203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 21627084 - 21627131
Alignment:
Q  8 cttcaaatccatgatcctcttctatgtttgcataagaatataagattt 55  Q
    ||||||||| |||||| || ||||||||||||||||||||| ||||||    
T  21627084 cttcaaatctatgatcatcgtctatgtttgcataagaatattagattt 21627131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 47221764 - 47221709
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| |||||||  |||||||  ||||||||||||| |||||||||||||||||||    
T  47221764 ataaatgaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttg 47221709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 21733338 - 21733380
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||  ||||||||||||||||||| |||||||||||||    
T  21733338 ttgttacctgaaattaagttaagagactataaatgtaattttg 21733380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Complemental strand, 31115889 - 31115839
Alignment:
Q  121 tgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  31115889 tgaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 31115839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 49023620 - 49023574
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgactta 176  Q
    |||||||  ||||||||||||| ||||||||||||||||||| ||||    
T  49023620 tgttacctgaaattaagttaagggactaaaaatgtaattttgcctta 49023574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 20121249 - 20121208
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  20121249 tgttacccgaaattaagttaagggactaaaagtgtaattttg 20121208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 21555934 - 21555893
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  21555934 tgttacctgaaattaagttaagggactaaaaatgtaattttg 21555893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 23036690 - 23036649
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  23036690 tgttacctaaaattaagttaagggactaaaattgtaattttg 23036649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 24331422 - 24331381
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  24331422 tgttacctgaaattaagttaagggactaaaaatgtaattttg 24331381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 34287559 - 34287518
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||    
T  34287559 tgttacctaaaattaagttaagagagtaaaagtgtaattttg 34287518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 41857411 - 41857452
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  41857411 tgttacccgaaattaagttaagggactaaaagtgtaattttg 41857452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 43575119 - 43575058
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaa 177  Q
    |||| |||||||  |||||||  ||||||||||||| ||||| ||||||||||||| |||||    
T  43575119 ataaatgaccaaactgttacctgaaattaagttaagggactataaatgtaattttgtcttaa 43575058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 45055373 - 45055324
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  45055373 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 45055324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 2699888 - 2699928
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  2699888 tgttacctgaaattaagttaagagactaaaagtgtaatttt 2699928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 7149571 - 7149603
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||||||||||| ||||||||||    
T  7149571 aaattaagttaagagactaaaagtgtaattttg 7149603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 8522575 - 8522623
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||||||  ||||||||||||| |||||||| |||||||||    
T  8522575 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 8522623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 8805787 - 8805747
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  8805787 tgttacctgaaattaagttaagggactaaaaatgtaatttt 8805747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 43268077 - 43268133
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| ||  |||| ||||||||||||||| |||||| |||||    
T  43268077 aatcttcaaatctatgatcttcaactatatttgcataagaatattagatttaaagct 43268133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 7e-18; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7610413 - 7610467
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  7610413 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 7610467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 24858567 - 24858513
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  24858567 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 24858513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3279336 - 3279392
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  3279336 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 3279392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 13697466 - 13697522
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  13697466 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 13697522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 14871900 - 14871844
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  14871900 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 14871844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16736969 - 16736913
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  16736969 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 16736913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 32772139 - 32772195
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  32772139 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 32772195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 40952234 - 40952178
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  40952234 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 40952178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 2467209 - 2467263
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  2467209 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 2467263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7601743 - 7601797
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  7601743 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 7601797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 39589726 - 39589780
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  39589726 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 39589780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 2426395 - 2426342
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  2426395 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 2426342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 1099040 - 1099096
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  1099040 aatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 1099096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 13577411 - 13577467
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  13577411 aatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagct 13577467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 18707436 - 18707380
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  18707436 aatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 18707380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 33429699 - 33429643
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  33429699 aatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagct 33429643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 2961043 - 2961098
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  2961043 atcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 2961098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 2969511 - 2969566
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  2969511 atcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 2969566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 1643689 - 1643743
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||    
T  1643689 tcttcaaatctatgatcctcttctatgtttgcataagattattaaatttgaagct 1643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 12854725 - 12854779
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||| |||||    
T  12854725 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttaaagct 12854779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 13455840 - 13455786
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| ||||||||||||    
T  13455840 tcttcaaatctatgatcctcgtctatgtttgcattagaatattagatttgaagct 13455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 33381595 - 33381539
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||| ||||||||||||||| ||||||||||||    
T  33381595 aatcttcaaatttatgatcctcgtctatttttgcataagaatattagatttgaagct 33381539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 19984424 - 19984370
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||  |||||||||||| ||||||||||| ||||||||||||    
T  19984424 tcttcaaatctatgatattcttctatgttttcataagaatattagatttgaagct 19984370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 22621197 - 22621251
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  22621197 tcttcaaatttatgatcctcatctatgtttgcataataatattagatttgaagct 22621251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 37943691 - 37943641
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagattt 55  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||    
T  37943691 aatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 37943641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42610945 - 42610891
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| || || ||| ||||||||||||||||||||| ||||||||||||    
T  42610945 tcttcaaatctataattctcgtctatgtttgcataagaatattagatttgaagct 42610891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 2467102 - 2467061
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  2467102 tgttacctaaaattaagttaagggactaaaaatgtaattttg 2467061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 13455945 - 13455986
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  13455945 tgttacctaaaattaagttaagggactaaaaatgtaattttg 13455986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 24858446 - 24858405
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||||||||||||||    
T  24858446 tgttacctaaaattaagttaagggactaaaaatgtaattttg 24858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2492812 - 2492867
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||| ||||||||||| ||||||||||||    
T  2492812 aatcttcaaatctatgatc-tcgtctatgtttacataagaatattagatttgaagct 2492867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3168259 - 3168203
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||| |  ||||||||| ||||||||||||||||||||| | ||||||||||    
T  3168259 aatcttcaattatatgatcctcgtctatgtttgcataagaatattatatttgaagct 3168203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3974361 - 3974417
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||  |||||| |||||    
T  3974361 aatcttcaaatctatgatcctcgtctatgtttgcataaaaatagtagatttaaagct 3974417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 8874378 - 8874346
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||||||||||||||||||||||    
T  8874378 aaattaagttaagagactaaaaatgtaattttg 8874346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 19131022 - 19131074
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  19131022 ttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagct 19131074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 19984534 - 19984574
Alignment:
Q  131 gttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  19984534 gttacctaaaattaagttaagggactaaaaatgtaattttg 19984574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 12875925 - 12875980
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| |||||||  ||||||| ||||||||||||| ||||||||||| ||||||||    
T  12875925 ataaatgaccaaactgttacctaaaattaagttaaaagactaaaaatataattttg 12875980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Complemental strand, 12875707 - 12875653
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaatt 184  Q
    ||||||| |||||||||||||| ||||||| ||||||||||| ||  ||||||||    
T  12875707 tgttacctaaaattaagttaagggactaaacatgtaattttgcctacattaaatt 12875653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 31486000 - 31485954
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgactta 176  Q
    |||||||  |||||||||||||||||||||| |||||||||| ||||    
T  31486000 tgttacctgaaattaagttaagagactaaaagtgtaattttgcctta 31485954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Original strand, 31618321 - 31618371
Alignment:
Q  11 caaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| || ||| || ||||||||||||||||||||| ||||||||||||    
T  31618321 caaatctataatcttcgtctatgtttgcataagaatattagatttgaagct 31618371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 37092329 - 37092383
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  37092329 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 37092383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 3974264 - 3974215
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| |||||| |  |||||||||||||| ||||||||||||||||||    
T  3974264 gaccaaattgttatctgaaattaagttaagaaactaaaaatgtaattttg 3974215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 7610533 - 7610574
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  |||||||||||||||||||||| ||||||||||    
T  7610533 tgttacctgaaattaagttaagagactaaaagtgtaattttg 7610574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 8357229 - 8357188
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatat 48  Q
    |||||||||| ||||||||  |||||||||||||||||||||    
T  8357229 tcttcaaatctatgatccttgtctatgtttgcataagaatat 8357188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 12854617 - 12854564
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaat 183  Q
    |||||||  ||||||||||||  ||||||||||||||||||| |||||| ||||    
T  12854617 tgttacctgaaattaagttaaaggactaaaaatgtaattttgccttaataaaat 12854564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 30129746 - 30129787
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  30129746 tgttacccgaaattaagttaagggactaaaagtgtaattttg 30129787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 3279445 - 3279505
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgactta 176  Q
    |||| |||||||  ||||||  |||||||||||||| |||||||| |||||||||| ||||    
T  3279445 ataaatgaccaaactgttacttaaaattaagttaagggactaaaagtgtaattttgcctta 3279505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 15858255 - 15858303
Alignment:
Q  123 accaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||| || ||||| ||||||||||||| ||||||||||| ||||||||    
T  15858255 accaaattattacctaaaattaagttaacagactaaaaatataattttg 15858303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 7e-18; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 52654082 - 52654136
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  52654082 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 52654136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 5748025 - 5748077
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  5748025 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaag 5748077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26842966 - 26842910
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  26842966 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 26842910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41935659 - 41935603
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  41935659 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 41935603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 46648217 - 46648273
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  46648217 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 46648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7067392 - 7067446
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  7067392 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 7067446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 16020121 - 16020067
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  16020121 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 16020067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 18568175 - 18568229
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  18568175 tcttcaaatctatgatcatcgtctatgtttgcataagaatataagatttgaagct 18568229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 22539837 - 22539891
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  22539837 tcttcaaatctataatcctcttctatgtttgcataagaatattagatttgaagct 22539891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 32922231 - 32922177
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  32922231 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 32922177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 35130962 - 35130908
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  35130962 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 35130908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 45801366 - 45801420
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  45801366 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 45801420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 46689307 - 46689361
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  46689307 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 46689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 52538029 - 52538083
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  52538029 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 52538083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 32188062 - 32188115
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  32188062 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 32188115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 25331965 - 25332021
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||| |||| ||||||||||||||||||||| ||||||||||||    
T  25331965 aatcttcaaatctatgaccctcgtctatgtttgcataagaatattagatttgaagct 25332021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 26886758 - 26886814
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  26886758 aatcttcaaatctatgatcctcatctatgtttacataagaatattagatttgaagct 26886814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 41376748 - 41376696
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  41376748 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 41376696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 44835121 - 44835177
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  44835121 aatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagct 44835177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17362448 - 17362502
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  17362448 tcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 17362502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45655843 - 45655897
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  |||||| || ||||||||||||||||||||||||||||||||||    
T  45655843 tcttcaaatttatgatcatcgtctatgtttgcataagaatataagatttgaagct 45655897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 9644803 - 9644755
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  9644803 gaccaaattgttacctaaaattaagttaagggactaaaaatgtaatttt 9644755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 39792065 - 39792121
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||||||||| ||||| ||||||||||||    
T  39792065 aatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagatttgaagct 39792121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 24270512 - 24270566
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||| ||||||||||||||||||||||||| ||||| ||||||    
T  24270512 tcttcaaatttatgattctcttctatgtttgcataagaatattagattcgaagct 24270566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 38556106 - 38556052
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| |||||||||| |||| ||||| ||||||||||||    
T  38556106 tcttcaaatctatgatcctcgtctatgtttgtataataatattagatttgaagct 38556052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 18635988 - 18636041
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||||||| || || |||||||||| |||||||||| |||||||||    
T  18635988 aatcttcaaatccatggtcttcatctatgtttgtataagaatattagatttgaa 18636041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10993791 - 10993735
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| | ||||||| ||||||||||||||| ||||| | ||||||||||    
T  10993791 aatcttcaaatctacgatcctcgtctatgtttgcataaaaatattatatttgaagct 10993735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 39792182 - 39792230
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||||||  ||||||||||||| ||||||||||||||||||    
T  39792182 gaccaaattgttacctgaaattaagttaagggactaaaaatgtaatttt 39792230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 41935536 - 41935496
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  41935536 tgttacctgaaattaagttaagagactaaaaatgtaatttt 41935496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 44551081 - 44551025
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||| ||||||  ||||||||| |||||||||| |||||||||| ||||||||||||    
T  44551081 aatcctcaaatttatgatcctcgtctatgtttgtataagaatattagatttgaagct 44551025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 16530375 - 16530320
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| ||||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  16530375 ataaatgaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 16530320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 45655949 - 45656004
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| |||||||  ||||||| |||||||||||||| |||||||| ||||||||||    
T  45655949 ataaatgaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttg 45656004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 46674758 - 46674707
Alignment:
Q  4 taatcttcaaatccatgatcctcttctatgtttgcataagaatataagattt 55  Q
    ||||||||||||| | ||||||| |||||||||| |||||||||| ||||||    
T  46674758 taatcttcaaatctacgatcctcgtctatgtttgtataagaatattagattt 46674707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 9902801 - 9902843
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaata 47  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||    
T  9902801 aatcttcaaatctatgatcctcgtctatgtttgcataataata 9902843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 15516469 - 15516416
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||| ||||||| || |||||||||    
T  15516469 tcttcaaatctatgatcctcgtctatgtttgcattagaatattag-tttgaagct 15516416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32488734 - 32488788
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  32488734 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 32488788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 45655737 - 45655695
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||  |||||||||||||||||||||| ||||||||||    
T  45655737 ttgttacctgaaattaagttaagagactaaaagtgtaattttg 45655695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 53563380 - 53563434
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||| |||| || |||||| | |||||||||||||| ||||||||||||||||||    
T  53563380 ataaatgactaaattgttatctaaaattaagttaagggactaaaaatgtaatttt 53563434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 10993676 - 10993627
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  10993676 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 10993627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 21475533 - 21475566
Alignment:
Q  138 aaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||||| ||||||||||||||||||    
T  21475533 aaaattaagttaagatactaaaaatgtaattttg 21475566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 37068728 - 37068687
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  37068728 tgttacctaaaattaagttaagggactaaaagtgtaattttg 37068687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 37068762 - 37068814
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||| | | ||||||||||||||||||||| |||||||||    
T  37068762 aatcttcaaatctatgattc-cgtctatgtttgcataagaatattagatttgaa 37068814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 41944168 - 41944209
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  41944168 tgttacctgaaattaagttaagggactaaaaatgtaattttg 41944209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 44038185 - 44038152
Alignment:
Q  138 aaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||||||||||||||||| ||||||    
T  44038185 aaaattaagttaagagactaaaaatgtgattttg 44038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 46648294 - 46648335
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  46648294 tgttacctgaaattaagttaagggactaaaaatgtaattttg 46648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 50512532 - 50512499
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaat 162  Q
    |||||||| |||||||||||||||||||||||||    
T  50512532 ttgttacctaaaattaagttaagagactaaaaat 50512499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Original strand, 9645043 - 9645083
Alignment:
Q  131 gttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||||||||||| ||||| ||||||||||    
T  9645043 gttacctaaaattaagttaagagagtaaaattgtaattttg 9645083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 16530480 - 16530428
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| || |||||| |||||  |||||||||||||| ||||||||||||    
T  16530480 ttcaaatctattatcctcgtctatacttgcataagaatattagatttgaagct 16530428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 23572749 - 23572805
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||  |||||||||||||||||||||   ||||||||||    
T  23572749 aatcttcaaatttatgatccttgtctatgtttgcataagaatatttaatttgaagct 23572805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 23963118 - 23963158
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaatgtaattt 169  Q
    |||||||| |||||||||||||| |||||||| ||||||||    
T  23963118 ttgttacctaaaattaagttaagggactaaaagtgtaattt 23963158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 26886890 - 26886922
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  26886890 aaattaagttaagggactaaaaatgtaattttg 26886922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30637112 - 30637056
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  |||||| |  ||||||||| ||||||||||| ||||||||||||    
T  30637112 aatcttcaaatttatgatctttatctatgtttacataagaatattagatttgaagct 30637056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 49387333 - 49387385
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||| ||||| ||| ||||||||||||||  ||||| ||||||||||    
T  49387333 tcttcaaatctatgattctcgtctatgtttgcatagcaatattagatttgaag 49387385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 7e-18; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 1479177 - 1479231
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  1479177 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttgaagct 1479231  T

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Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 42950669 - 42950723
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  42950669 tcttcaaatctatgatcctcttctatgtttgcataagaatattagatttgaagct 42950723  T

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Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 1270257 - 1270313
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  1270257 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 1270313  T

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Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 9027191 - 9027135
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  9027191 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 9027135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 11724783 - 11724727
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  11724783 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 11724727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 17549217 - 17549273
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  17549217 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 17549273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 23926539 - 23926595
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  23926539 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 23926595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 26499577 - 26499521
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  26499577 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 26499521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 29175072 - 29175128
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  29175072 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 29175128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30488246 - 30488190
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  30488246 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 30488190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 341476 - 341422
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  341476 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 341422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 44490454 - 44490508
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  44490454 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 44490508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 1650651 - 1650707
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||    
T  1650651 aatcttcaaatctatgatccgcgtctatgtttgcataagaatattagatttgaagct 1650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9912060 - 9912116
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  9912060 aatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagct 9912116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 10192233 - 10192289
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  10192233 aatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 10192289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 11122794 - 11122846
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  11122794 tcttcaaatctatgatcctcgtctatgtttgcataaaaatataagatttgaag 11122846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 16350754 - 16350702
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  16350754 ttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 16350702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 22899181 - 22899129
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  22899181 ttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 22899129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 29421841 - 29421897
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  29421841 aatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaagct 29421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 31556895 - 31556951
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| |||||||||||||||||||||  |||||||||||    
T  31556895 aatcttcaaatctatgatcctcgtctatgtttgcataagaatatttgatttgaagct 31556951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 35412029 - 35412081
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  35412029 ttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 35412081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 42030687 - 42030743
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  42030687 aatcttcaaatctatgatcttcgtctatgtttgcataagaatattagatttgaagct 42030743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 3889036 - 3888981
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  3889036 atcttccaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 3888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 33274547 - 33274598
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  33274547 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 33274598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 15461402 - 15461456
Alignment:
Q  4 taatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  15461402 taatcttcaaatctatgatcctcgtctatgtttgcataaaaatattagatttgaa 15461456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 22196073 - 22196127
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  22196073 tcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 22196127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 20663875 - 20663819
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| ||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  20663875 aatctttaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 20663819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 13421238 - 13421187
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||| ||||||||| | ||||||||||||||||||| |||||||||    
T  13421238 tcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttgaa 13421187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 10714158 - 10714212
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||| | ||||||||||    
T  10714158 tcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagct 10714212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 11723870 - 11723816
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | ||| ||||||||||||||| ||||||||||||    
T  11723870 tcttcaaatctatgatcctcgtatatatttgcataagaatattagatttgaagct 11723816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 171
Target Start/End: Complemental strand, 22486029 - 22485996
Alignment:
Q  138 aaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||||||||||||||||||||||||    
T  22486029 aaaattaagttaagagactaaaaatgtaattttg 22485996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 33274660 - 33274709
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| |||||||| |||||||||||||| |||||||| ||||||||||    
T  33274660 gaccaaattgttacctaaaattaagttaagggactaaaagtgtaattttg 33274709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 1479280 - 1479328
Alignment:
Q  123 accaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||| ||||||||||||||||||||||| | ||||||||    
T  1479280 accaaggtgttacctaaaattaagttaagagactaaaagtataattttg 1479328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 22196194 - 22196234
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  22196194 tgttacctaaaattaagttaagagactaaaaatataatttt 22196234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 22486160 - 22486200
Alignment:
Q  21 atcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  22486160 atcctcgtctatgtttgcataagaatattagatttgaagct 22486200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 28789029 - 28788977
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| ||||| |||| |||||||||| ||||||||||||    
T  28789029 ttcaaatctatgatcctcgtctatatttgtataagaatattagatttgaagct 28788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 14951735 - 14951704
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||||||||||||||||||||||||||||    
T  14951735 aaattaagttaagagactaaaaatgtaatttt 14951704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 171
Target Start/End: Complemental strand, 20663790 - 20663759
Alignment:
Q  140 aattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||||||||||||||||||||||    
T  20663790 aattaagttaagagactaaaaatgtaattttg 20663759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 22195981 - 22195922
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgactt 175  Q
    |||| |||||||  ||||||| |||||||||||||| |||||||| ||||||||| ||||    
T  22195981 ataaatgaccaaactgttacctaaaattaagttaagggactaaaactgtaattttaactt 22195922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 29379824 - 29379782
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||  ||||||| |||||||||||||||||||||||||    
T  29379824 ttgttacctgaaattaaattaagagactaaaaatgtaattttg 29379782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 40657450 - 40657504
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||| ||||||||| | ||||||||||    
T  40657450 tcttcaaatctatgatccttatctatgtttgcttaagaatattatatttgaagct 40657504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 3322039 - 3321998
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||| |||||||||||||| ||||||||||    
T  3322039 tgttacctaaaattaaattaagagactaaaactgtaattttg 3321998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 3322164 - 3322197
Alignment:
Q  28 tctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||||||||||||||| ||||||||||||    
T  3322164 tctatgtttgcataagaatattagatttgaagct 3322197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 9912184 - 9912233
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgacttaatt 179  Q
    ||||||| |||||||||||||| || ||||| |||||||||| |||||||    
T  9912184 tgttacctaaaattaagttaagggattaaaagtgtaattttgccttaatt 9912233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 10192135 - 10192086
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||| |||||||| ||||||||||    
T  10192135 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 10192086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 29154334 - 29154375
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  29154334 tgttacctaaaattaagttaagggactaaaattgtaattttg 29154375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 29174965 - 29174924
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  29174965 tgttacctgaaattaagttaagggactaaaaatgtaattttg 29174924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 33274438 - 33274397
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  33274438 tgttacctgaaattaagttaagggactaaaaatgtaattttg 33274397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 17549111 - 17549071
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  17549111 tgttacctgaaattaagttaagggactaaaaatgtaatttt 17549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 28788910 - 28788870
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  28788910 tgttacctgaaattaagttaagagactaaaagtgtaatttt 28788870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 38574898 - 38574930
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  38574898 aaattaagttaagggactaaaaatgtaattttg 38574930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 41445 - 41389
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  41445 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 41389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33279084 - 33279140
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  33279084 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 33279140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 42684954 - 42684898
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  42684954 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 42684898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 17494887 - 17494833
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  17494887 tcttcaaatctatgatcctcgtctatgtttgcataagaatataagatttaaagct 17494833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 34198999 - 34198945
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||||    
T  34198999 tcttcaaatctatgatcctcttctatgtttgcataagaatattaaatttgaagct 34198945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39198781 - 39198727
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  39198781 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 39198727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 148457 - 148403
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||    
T  148457 tcttcaaatctatgatcctcatctatgtttgcataagaatattaaatttgaagct 148403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 41617188 - 41617241
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||    
T  41617188 aatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaa 41617241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 29596550 - 29596606
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||| |||||| |||||    
T  29596550 aatcttcaaatctatgatactcgtctatgtttgcataagaatattagatttaaagct 29596606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 8156858 - 8156912
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| || |||||  ||||||||||||||||||||| ||||||||||||    
T  8156858 tcttcaaatctataatcctggtctatgtttgcataagaatattagatttgaagct 8156912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 18805893 - 18805947
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||  ||||||||| | ||||||||||||||||||| ||||||||||    
T  18805893 aatcttcaaatatatgatcctcgtatatgtttgcataagaatattagatttgaag 18805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 40277386 - 40277332
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| |||||||||||||||| |||| ||| ||||||||    
T  40277386 tcttcaaatctatgatcctcgtctatgtttgcataagtatattagacttgaagct 40277332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 29726693 - 29726652
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaat 46  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  29726693 aatcttcaaatctatgatcctcgtctatgtttgcataagaat 29726652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 33278986 - 33278937
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  |||||||||||||||||||||| ||||||||||    
T  33278986 gaccaaattgttacctgaaattaagttaagagactaaaagtgtaattttg 33278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 36556683 - 36556739
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  |||||| || ||||||||| ||||||||||| ||||||||||||    
T  36556683 aatcttcaaatttatgatcatcgtctatgtttacataagaatattagatttgaagct 36556739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 26187276 - 26187319
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatat 48  Q
    |||||||||||| ||| || ||||||||||||||||||||||||    
T  26187276 aatcttcaaatctatggtcttcttctatgtttgcataagaatat 26187319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 171
Target Start/End: Original strand, 26938454 - 26938496
Alignment:
Q  129 ttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||| |||||||||||||| |||||||| ||||||||||    
T  26938454 ttgttacctaaaattaagttaagggactaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 27712914 - 27712968
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  27712914 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 27712968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 28828380 - 28828326
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  28828380 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 28828326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 30253790 - 30253736
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  30253790 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 30253736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 148344 - 148295
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| |||||||| |||||||||||||| ||| |||| ||||||||||    
T  148344 gaccaaattgttacctaaaattaagttaagggaccaaaagtgtaattttg 148295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Complemental strand, 12649623 - 12649590
Alignment:
Q  28 tctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||||||||||||||||| ||||||||||||    
T  12649623 tctatgtttgcataagaatattagatttgaagct 12649590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 18805789 - 18805736
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaat 183  Q
    |||||||  |||||||||||||  ||||||||||||||||||| || |||||||    
T  18805789 tgttacctgaaattaagttaaggaactaaaaatgtaattttgattttattaaat 18805736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 30463957 - 30463916
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| ||||| |||||||| |||||||||||||||||||    
T  30463957 tgttacctaaaataaagttaagggactaaaaatgtaattttg 30463916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 36556806 - 36556847
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  36556806 tgttacctgaaattaagttaagggactaaaaatgtaattttg 36556847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 148536 - 148576
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  148536 tgttacctgaaattaagttaagggactaaaaatgtaatttt 148576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 170
Target Start/End: Complemental strand, 7672675 - 7672643
Alignment:
Q  138 aaaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||||||||||||||||||| |||||||||    
T  7672675 aaaattaagttaagagactaaaagtgtaatttt 7672643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 10925137 - 10925105
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||| ||||||||||||||||||    
T  10925137 aaattaagttaagaaactaaaaatgtaattttg 10925105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 30464066 - 30464118
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  30464066 ttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 30464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 33526974 - 33526942
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  33526974 aaattaagttaagggactaaaaatgtaattttg 33526942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 34632496 - 34632536
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  34632496 tgttacctgaaattaagttaagggactaaaaatgtaatttt 34632536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 41617082 - 41617050
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||||||||||| ||||||||||    
T  41617082 aaattaagttaagagactaaaagtgtaattttg 41617050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 42685051 - 42685099
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| |||||||  |||||||||||||||||||||||  ||||||||    
T  42685051 gaccaaattgttacttaaaattaagttaagagactaaaagagtaatttt 42685099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 43497373 - 43497317
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||| || || ||||||||||||||||||||| | ||||||||||    
T  43497373 aatcttcaaatttatggtcttcatctatgtttgcataagaatatcatatttgaagct 43497317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 685119 - 685063
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  685119 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 685063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 22568911 - 22568967
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  22568911 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 22568967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 2316639 - 2316693
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  2316639 tcttcaaatctattatcctcttctatgtttgcataagaatattagatttgaagct 2316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 9899343 - 9899397
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  9899343 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaag 9899397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 20027923 - 20027977
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  20027923 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 20027977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9220251 - 9220307
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||    
T  9220251 aatcttcaaatctatgatcctcgtctatgtttgcataagagtattagatttgaagct 9220307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 9546577 - 9546521
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  9546577 aatcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagct 9546521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 13853308 - 13853252
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  13853308 aatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagct 13853252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 17853809 - 17853753
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| |||||||||||||| |||||| ||||||||||||    
T  17853809 aatcttcaaatctatgatcctcgtctatgtttgcatatgaatattagatttgaagct 17853753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 24325157 - 24325102
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  24325157 atctttaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 24325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 3105768 - 3105714
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||    
T  3105768 tcttcaaatctatgatcctcgtctatgtttgcataagaatgttagatttgaagct 3105714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 8129683 - 8129737
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  8129683 tcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagct 8129737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8488026 - 8487972
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  8488026 tcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagct 8487972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 13178387 - 13178333
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  13178387 tcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaagct 13178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 25121663 - 25121610
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| |||||| || ||||||||||||||||||||| |||||||||    
T  25121663 aatcttcaaatctatgatcatcgtctatgtttgcataagaatattagatttgaa 25121610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 3012075 - 3012023
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| |||||| || ||||||||||||||||||||| ||||||||||||    
T  3012075 ttcaaatctatgatcttcatctatgtttgcataagaatattagatttgaagct 3012023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 21926230 - 21926174
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| || |||||| | ||||||||||||||||||| ||||||||||||    
T  21926230 aatcttcaaatctattatcctcatttatgtttgcataagaatattagatttgaagct 21926174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 13853199 - 13853136
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaatt 179  Q
    |||| ||||||| ||||||||  ||||||||||||| |||||||||| |||||||| |||||||    
T  13853199 ataaatgaccaaattgttacctgaaattaagttaagggactaaaaatataattttgccttaatt 13853136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 1925264 - 1925318
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||    
T  1925264 aatcttcaaatctatgatcctcgtctatttttgcataagaatgttagatttgaag 1925318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 2883047 - 2882993
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  2883047 tcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagct 2882993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 28852338 - 28852386
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagattt 55  Q
    |||||||||| ||||||||| ||||||||||||||| ||||| ||||||    
T  28852338 tcttcaaatctatgatcctcgtctatgtttgcataaaaatattagattt 28852386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 32557400 - 32557448
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| |||||||| |||||||||||||| |||||||| |||||||||    
T  32557400 gaccaaattgttacctaaaattaagttaagggactaaaattgtaatttt 32557448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 170
Target Start/End: Complemental strand, 3105638 - 3105607
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||||||||||||||||||||||||||||    
T  3105638 aaattaagttaagagactaaaaatgtaatttt 3105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 2863744 - 2863690
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||| ||||| ||||||||||||    
T  2863744 tcttcaaatctatgatcctcgtttatgtttggataataatattagatttgaagct 2863690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 12240630 - 12240684
Alignment:
Q  7 tcttcaaatccatga-tcctcttctatgtttgcataagaatataagatttgaagc 60  Q
    |||||||||| |||| ||||| ||||||||| ||||||||||| |||||||||||    
T  12240630 tcttcaaatctatgaatcctcgtctatgtttacataagaatattagatttgaagc 12240684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 28852459 - 28852497
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatt 168  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  28852459 tgttacctaaaattaatttaagagactaaaaatgtaatt 28852497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 12240523 - 12240482
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||    
T  12240523 tgttacctaaaattaagttaaaagactaaaagtgtaattttg 12240482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 13178494 - 13178535
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  13178494 tgttacctaaaattaagttaagggactaaaactgtaattttg 13178535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 24335584 - 24335535
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||| |||||||||||||| ||||||||||    
T  24335584 gaccaaattgttacctgaaattaaattaagagactaaaagtgtaattttg 24335535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 25121577 - 25121528
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  |||||||||||||||||||||  ||||||||||    
T  25121577 gaccaaattgttacctgaaattaagttaagagactaaacgtgtaattttg 25121528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 28852231 - 28852190
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  28852231 tgttacctaaaattaagttaagggactaaaagtgtaattttg 28852190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 685224 - 685264
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  |||||||||||||||||||||| |||||||||    
T  685224 tgttacctgaaattaagttaagagactaaaagtgtaatttt 685264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 22569034 - 22569074
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    ||||||| |||||||||||||| |||||||| |||||||||    
T  22569034 tgttacctaaaattaagttaagggactaaaagtgtaatttt 22569074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 25026141 - 25026085
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  | ||||||| ||||||||||||||  ||||| ||||||||||||    
T  25026141 aatcttcaaatataggatcctcgtctatgtttgcatataaatattagatttgaagct 25026085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10296758 - 10296702
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  10296758 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 10296702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 17504209 - 17504153
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  17504209 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 17504153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 9877553 - 9877607
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  9877553 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 9877607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 27547092 - 27547146
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||    
T  27547092 tcttcaaatctatgatcctcgtctatgtttgcataagaatataaaatttgaagct 27547146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 40770290 - 40770344
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||    
T  40770290 tcttcaaatctatgatcctcgtctatgtttgcataagagtataagatttgaagct 40770344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44344188 - 44344134
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| || ||||||||||||||||||||||||||||||||||    
T  44344188 tcttcaaatctatgatcttcgtctatgtttgcataagaatataagatttgaagct 44344134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 4695084 - 4695137
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| |||||||||    
T  4695084 aatcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaa 4695137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12650088 - 12650032
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| | ||||||||||||||||||| ||||||||||||    
T  12650088 aatcttcaaatctatgatcctcgtttatgtttgcataagaatattagatttgaagct 12650032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 45286380 - 45286436
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  45286380 aatcttcaaatatatgatcctcgtctatgtttgcataagaatattagatttgaagct 45286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 46283554 - 46283606
Alignment:
Q  9 ttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  46283554 ttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 46283606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 730963 - 730909
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| |||||||||| |||||||||||||||||||||||    
T  730963 tcttcaaatttatgatcctcgtctatgtttgtataagaatataagatttgaagct 730909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8853259 - 8853205
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||| ||||||||||| ||||||||||||    
T  8853259 tcttcaaatctatgatcctcgtctatgtttacataagaatattagatttgaagct 8853205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 26095639 - 26095693
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||    
T  26095639 tcttcaaatctatgattctcgtctatgtttgcataagaatattagatttgaagct 26095693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 40934568 - 40934622
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  40934568 tcttcagatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 40934622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 48524657 - 48524603
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||    
T  48524657 aatcttcaaatctatgatcctcatctatgtttgcataaaaatattagatttgaag 48524603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 39673002 - 39672949
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||    
T  39673002 aatcttcaaattcatgatcctcgtctatgtttgcataaaaatattagatttgaa 39672949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1501685 - 1501629
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||  || ||||||||||||||||||||| ||||||||||||    
T  1501685 aatcttcaaatctatgattttcgtctatgtttgcataagaatattagatttgaagct 1501629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 24234703 - 24234647
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||| || || ||||||||||||||||||||||||||||||||||    
T  24234703 aatcttcaaatttatggtcttcatctatgtttgcataagaatataagatttgaagct 24234647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33471559 - 33471615
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||| ||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  33471559 aatctttaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 33471615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 48970849 - 48970901
Alignment:
Q  6 atcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    ||||||||||| | ||||||||| ||||||||||||||||||| |||||||||    
T  48970849 atcttcaaatctacgatcctcttttatgtttgcataagaatattagatttgaa 48970901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 49021814 - 49021870
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||||||| ||||| ||||||| ||||||| ||||||||||||    
T  49021814 aatcttcaaatctatgatcctcgtctatatttgcattagaatattagatttgaagct 49021870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 17191255 - 17191192
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaatt 179  Q
    |||| ||||||| ||||||||  ||||||||||||| |||||||| |||||||||| |||||||    
T  17191255 ataaatgaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttgccttaatt 17191192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 3459799 - 3459745
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  3459799 tcttcaaatctatgatcctcgtttatgtttgtataagaatattagatttgaagct 3459745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 5586637 - 5586691
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||| | ||||||||||    
T  5586637 tcttcaaatctatgatccttgtctatgtttgcataagaatattaaatttgaagct 5586691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 5618235 - 5618181
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| | |||||||| |||||||||| ||||||||||||    
T  5618235 tcttcaaatctatgatcctcgtttatgtttggataagaatattagatttgaagct 5618181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 32694458 - 32694512
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||| | ||||||||||||||||||| ||||||||||||    
T  32694458 tcttcaaatttatgatcctcgtttatgtttgcataagaatattagatttgaagct 32694512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 43726371 - 43726317
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaag 59  Q
    |||||||||||| |||||| || ||||||||||||||| ||||| ||||||||||    
T  43726371 aatcttcaaatctatgatcatcgtctatgtttgcataaaaatattagatttgaag 43726317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 9877447 - 9877406
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  9877447 tgttacctgaaattaagttaagagactaaaaatgtaattttg 9877406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 45286283 - 45286234
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  |||||||||||||||||||||| ||||||||||    
T  45286283 gaccaaattgttacctgaaattaagttaagagactaaaagtgtaattttg 45286234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 8828745 - 8828689
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||| |   |||||||||||||||||||| ||||||||||||    
T  8828745 aatcttcaaatctatgatcattgactatgtttgcataagaatattagatttgaagct 8828689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 170
Target Start/End: Complemental strand, 40770183 - 40770143
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  40770183 tgttacctgaaattaagttaagagactaaaaatgtaatttt 40770143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 45569154 - 45569205
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    |||||||||| ||||||||| ||||| ||||||||||||||| | |||||||    
T  45569154 tcttcaaatctatgatcctcgtctatatttgcataagaatattatatttgaa 45569205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 50312063 - 50312008
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||| |||||||  |||||||  ||||||| |||||||||||||||||||||||||    
T  50312063 ataaatgaccaaactgttacctgaaattaaattaagagactaaaaatgtaattttg 50312008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 5586744 - 5586810
Alignment:
Q  116 ataagtgaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaa 182  Q
    |||| |||||||  |||||||  ||||||||||||| |||||||| |||||||||| ||| ||||||    
T  5586744 ataaatgaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcctttattaaa 5586810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 6489036 - 6488982
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  |||||||||||||||||||||   ||||||||||    
T  6489036 tcttcaaatctatgatccttgtctatgtttgcataagaatatttaatttgaagct 6488982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 8641109 - 8641055
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| ||  |||||||| ||||||||||| ||||||||||||    
T  8641109 tcttcaaatctatgatcatcggctatgttttcataagaatattagatttgaagct 8641055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 25012798 - 25012852
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||  ||||||||||| ||| ||||| ||||||||||||    
T  25012798 tcttcaaatctatgatccttgtctatgtttgcgtaaaaatattagatttgaagct 25012852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 35521384 - 35521331
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| |||||| | | |||||||||||||||||||| ||||||||||||    
T  35521384 tcttcaaatctatgatcttgt-ctatgtttgcataagaatattagatttgaagct 35521331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 184
Target Start/End: Complemental strand, 44344074 - 44344012
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttgacttaattaaatt 184  Q
    |||||| ||||||||  ||||||||||||| |||||||| |||||||||| ||| | ||||||    
T  44344074 gaccaatttgttacctgaaattaagttaagggactaaaagtgtaattttgcctttagtaaatt 44344012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 50312155 - 50312201
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagat 53  Q
    |||||||||| ||||||||| |||||| |||||||||||||| ||||    
T  50312155 tcttcaaatctatgatcctcgtctatggttgcataagaatattagat 50312201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 730846 - 730801
Alignment:
Q  126 aagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||  ||||||||||||| |||||||| ||||||||||    
T  730846 aagttgttacctgaaattaagttaagggactaaaagtgtaattttg 730801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 9877666 - 9877715
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||| ||||||||  ||||||||||||| |||||||||| ||||||||    
T  9877666 gaccaaattgttacctgaaattaagttaagggactaaaaatataattttg 9877715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 17504314 - 17504355
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  17504314 tgttacctgaaattaagttaagggactaaaaatgtaattttg 17504355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 29716425 - 29716466
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  ||||||||||||| |||||||||||||||||||    
T  29716425 tgttacctgaaattaagttaagggactaaaaatgtaattttg 29716466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 32694579 - 32694620
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||  |||||||||||||||||||||||||||| ||||    
T  32694579 tgttacctgaaattaagttaagagactaaaaatgtaaatttg 32694620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Original strand, 35521478 - 35521519
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||| |||||||||||||| |||||||| ||||||||||    
T  35521478 tgttacctaaaattaagttaagggactaaaagtgtaattttg 35521519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 171
Target Start/End: Complemental strand, 40934459 - 40934418
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttg 171  Q
    |||||||||||||||||||||  |||||||| ||||||||||    
T  40934459 tgttacccaaaattaagttaatggactaaaagtgtaattttg 40934418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 16515905 - 16515945
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  16515905 tgttacctgaaattaagttaagggactaaaaatgtaatttt 16515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 27065179 - 27065147
Alignment:
Q  139 aaattaagttaagagactaaaaatgtaattttg 171  Q
    ||||||||||||| |||||||||||||||||||    
T  27065179 aaattaagttaagggactaaaaatgtaattttg 27065147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 40770403 - 40770451
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||||||  ||||||||||||| |||||||| |||||||||    
T  40770403 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 40770451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 170
Target Start/End: Original strand, 40934681 - 40934729
Alignment:
Q  122 gaccaagttgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||| ||||||||  ||||||||||||| |||||||| |||||||||    
T  40934681 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 40934729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 48970968 - 48971008
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaatttt 170  Q
    |||||||  ||||||||||||| ||||||||||||||||||    
T  48970968 tgttacctgaaattaagttaagggactaaaaatgtaatttt 48971008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 258905 - 258959
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  258905 tcttcaaatctatgatcctcgtctatgtttgcataagaatattagatttgaagct 258959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 4528 - 4472
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||  ||||||||| ||||||||||||||||||||| ||||||||||||    
T  4528 aatcttcaaatttatgatcctcgtctatgtttgcataagaatattagatttgaagct 4472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 73523 - 73577
Alignment:
Q  7 tcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||  ||||||||||||||||||||||||| ||||| ||||||||||||    
T  73523 tcttcaaatatatgatcctcttctatgtttgcataataatattagatttgaagct 73577  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 108004 - 108057
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaa 58  Q
    ||||||| |||| ||||| ||| ||||||||||||||||||||| |||||||||    
T  108004 aatcttcgaatctatgattctcgtctatgtttgcataagaatattagatttgaa 108057  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 323576 - 323617
Alignment:
Q  20 gatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  323576 gatcctcgtctatgtttgcataagaatattagatttgaagct 323617  T

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Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 323465 - 323419
Alignment:
Q  130 tgttacccaaaattaagttaagagactaaaaatgtaattttgactta 176  Q
    |||||||  |||||||||||||||||||||| |||||||||| ||||    
T  323465 tgttacctgaaattaagttaagagactaaaagtgtaattttgcctta 323419  T

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Target: scaffold0592 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 8536 - 8592
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| |||||||   | ||||||||||||||||||| ||||||||||||    
T  8536 aatcttcaaatctatgatccctgtttatgtttgcataagaatattagatttgaagct 8592  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10085 - 10029
Alignment:
Q  5 aatcttcaaatccatgatcctcttctatgtttgcataagaatataagatttgaagct 61  Q
    |||||||||||| ||||| ||  |||||||||| |||||||||  ||||||||||||    
T  10085 aatcttcaaatctatgatacttgtctatgtttgtataagaatactagatttgaagct 10029  T

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