View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2752_low_36 (Length: 270)
Name: NF2752_low_36
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2752_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 27769508 - 27769293
Alignment:
| Q |
10 |
aagaaaatttcatctgattgcagtaaaaatgatcatgaggtacatcaaaggcacaatagtttgtggattgttgaacccaattgtgttggtcggatggtgt |
109 |
Q |
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| T |
27769508 |
aagaaaatttcatctgattgcagtaaaaatgatcatgaggtacatcaaaggcacaatagtttatggattgttgaacccaattgtgttggtcggatggtgt |
27769409 |
T |
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| Q |
110 |
cagcttgagactttgaagtgtactcctctcaagatcttcctatgaccagttcaatcgtaaactcctattccaataattcaataaagttctctttgaactg |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27769408 |
cagcttgagactttgaagtgtactcctctcaagatcttcctatgaccagttcaattgtaaactcctattccaataattcaataaagttctctttgaactg |
27769309 |
T |
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| Q |
210 |
aatacacttctcattc |
225 |
Q |
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|||||||||||||||| |
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| T |
27769308 |
aatacacttctcattc |
27769293 |
T |
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