View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2752_low_8 (Length: 520)
Name: NF2752_low_8
Description: NF2752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2752_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 468; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 18 - 510
Target Start/End: Original strand, 41698418 - 41698912
Alignment:
| Q |
18 |
caaacatctcaagtttttcacgttccattccaaagctctgtggccaagttctacaatgaacacaaattagattattgtcttatcctcttaaagtgtttag |
117 |
Q |
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| T |
41698418 |
caaacatctcaagtttttcacgttccattccaaagctctgtggccaagttctacaatgaacacaaattagattattgtcttatcctcttaaagtgtttag |
41698517 |
T |
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| Q |
118 |
ctacttactactgctcatgaataaatgtctgagttagcatattatcctcattgtttatggcttgggcctcatttttaccttttaagagaaatttacttgt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
41698518 |
ctacttactactgctcatgaataaatgtctgagttagcatattatcctcattgtttatggcttgggcctcatttttaacttttaagagaaatttacttgt |
41698617 |
T |
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| Q |
218 |
tatcccctcacttatcatgttacaccccacaccctcaaatgttgtttatttcagttttgctctctttaattactttaa--tttttactgactcgccaaaa |
315 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |
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| T |
41698618 |
tatcccctcacttatcaagttacaccccacaccctcaaatgttgtttatttcagttttgctctctttaattactttaatttttttactgactagccaaaa |
41698717 |
T |
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| Q |
316 |
ctttctaaacactaaccgaagtttccgaaactaaaattacagatatattataatgcccataatttcaaaaagaaaaacataagatgtctttgaaacacac |
415 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
41698718 |
ctttctaaacactaaccgaagtttccgaaactaaaattacagatatattataatgcccgtaatttcaaaaagaaaaacataagatgtctttgaaacacac |
41698817 |
T |
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| Q |
416 |
cttagtgatgtcttgaatcaactaaatatctgaatttcaagtaggaaagatgtctttgaaatactcaattaggatcctgcggatatcttcctttg |
510 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41698818 |
cttagtgatgtcttgaatcaactaaatatctgaatttcaagtaggaaagatgtctttgaaatactcaattaggatcctgcggatatcttcctttg |
41698912 |
T |
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