View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_11 (Length: 544)
Name: NF2753_high_11
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 55 - 532
Target Start/End: Original strand, 42959307 - 42959768
Alignment:
| Q |
55 |
atctattttatcatttcaattgagaaaagtaaaacaaaattccttttcctttatatata----ctcggactcgatggaagttagttattattcctcctct |
150 |
Q |
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| T |
42959307 |
atctattttatcatttcaattgagaaaagtaaaacaaaattccttttcctttatatatatatactcggactcgatggaagttagttattattcctcctct |
42959406 |
T |
|
| Q |
151 |
gatctgacttatcattttttcattctcttcaggccttcttccattcatatagaataatacaggacaagactattaaaacctttttccaaatcaaaagttt |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| |
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| T |
42959407 |
gatctgacttatcattttttcattctcttcaggccttcttccatccatatagaataataca-----agactattaaaccctttttccaaatcaaaagttt |
42959501 |
T |
|
| Q |
251 |
caaactctcatttgaacttgtcaattttcttcaacagttaagcagtttcagtttcggactctgtcaaacgcgtgtgggactaataaataaaacaaccaac |
350 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |
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| T |
42959502 |
caaactctcatttgaacttgtcaattttcttcaacagttaagcggtttcagtttcggactctgtcaaacgcgtgtgggacta---------------aac |
42959586 |
T |
|
| Q |
351 |
aggtaaatgcttaacatctttatactatttatttcatgctgtgtttcggaattttgatgaattgttgttgttggtgctgttttaaggtttcaaaatgtta |
450 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
42959587 |
aggtaaatgcttaacatctttatactatttatttcatgctgtgtttcggaattttgatgaatttttgttgttggtgctgttttaaggtttcaaaatgtta |
42959686 |
T |
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| Q |
451 |
ggggatttcattactcgatgtcttatgtaagtatataactactttttccatttcttcttgtttccattttcttattcatctc |
532 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
42959687 |
ggggatttcattactcgatgtcttatgtaagtatataactactttttccatttcttcttgtttccattttcttattcttctc |
42959768 |
T |
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