View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_43 (Length: 269)
Name: NF2753_high_43
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_43 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 2876281 - 2876031
Alignment:
| Q |
1 |
agcataatatcaacatatttctagttcagtaaaaattagcttataaagttatcaaagtgtttggtgaaattaatgattgaaaataacatcaaataaatat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2876281 |
agcataatatcaacatatttctagttcagtaaaaattagcttataaagttatcaaagtgtttggtgaaattaatgattgaaaataacatcaaataaatat |
2876182 |
T |
|
| Q |
101 |
gaaacaacattaaatcaatggttgtgttggcaagttggatttcacagcgtcgttgctattttgattcgcttcatatggtgcacttagcaactatggacat |
200 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| || |
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| T |
2876181 |
gaaacaacattaaatcaatggttgtgttggtaagttggatttcagagcgtcgttgctattttgatccgcttcatgtggtgcacttagcaactatggatat |
2876082 |
T |
|
| Q |
201 |
acatcaatttcatcattacaccaatatatgttggagactattagagatttc |
251 |
Q |
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||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
2876081 |
acatcgatttcatcattacactaatatatgttggagactattagagatttc |
2876031 |
T |
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