View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_44 (Length: 267)
Name: NF2753_high_44
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_44 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 11 - 267
Target Start/End: Original strand, 6937194 - 6937450
Alignment:
| Q |
11 |
cacagacatctttcttaatttcagatgtttcatattctggaatcacatccaacatgcacattttcctattatgcttcttcctgcaattgatctgcagtgt |
110 |
Q |
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| T |
6937194 |
cacagacatctttcttaatttcagatgtttcatattctggaatcacatccaacatgcacattttcctattatgcttcttcctgcaattgatctgcagtgt |
6937293 |
T |
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| Q |
111 |
cctagttaagattataggttttcctgagaaacaaccagcaacataaacctcaattacaggaacagaaacatgttttcctttgaaaaaaccactattagat |
210 |
Q |
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| T |
6937294 |
tctagttaagattataggttttcctgagaaacaaccagcaacataaacctcaatttcaggaacagaaacatgttttcctttgaaaaaaccactattagat |
6937393 |
T |
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| Q |
211 |
gccatttctgtttcacaattcatactccaatatctcttatcattatcatcatttttc |
267 |
Q |
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| T |
6937394 |
gccatttctgtttcacaattcatactccaatatctcttatcattatcatgatttttc |
6937450 |
T |
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