View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_46 (Length: 250)
Name: NF2753_high_46
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_46 |
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Alignment Details
Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 6938515 - 6938721
Alignment:
| Q |
13 |
aatatcaactatgtgttctttcttctaaacaaagcataatatatagtagtaatacattaaaaatatattaagaaagtataggttcatttatttattttgt |
112 |
Q |
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| T |
6938515 |
aatatcaactatgtgttctttcttctaaacaaagcataatatatagta---atacattaaaaatatattaagaaagtataggatcatttatttattttgt |
6938611 |
T |
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| Q |
113 |
aatac-tgattacttgtaggatcatttgtagatccaaaaatcttaagaaagcatctccttttaattttcctttgctcttttactttgatataatatttta |
211 |
Q |
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||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6938612 |
aatacctgattacttgtaggatcatttgtagatc-aaaaatcttacgaaagcatctccttttaattttcctttgctcttttactttgatataatatttta |
6938710 |
T |
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| Q |
212 |
aacatgcttgc |
222 |
Q |
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||||||||||| |
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| T |
6938711 |
aacatgcttgc |
6938721 |
T |
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