View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2753_high_51 (Length: 247)
Name: NF2753_high_51
Description: NF2753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2753_high_51 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 3611513 - 3611742
Alignment:
| Q |
18 |
atcccatgattccatgtcccactttcttgtctttggaatatcaacggttctgtttttgttcacaaccttaataaaattatagctttatgagctccattta |
117 |
Q |
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| T |
3611513 |
atcccatgattccatgtcccactttcttgtctttggaatatcaacggttctgtttttgttcacaaccttaataaaattatagctttatgagctccattta |
3611612 |
T |
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| Q |
118 |
ttaccacatgtgtaccttattataatttattttcatcatttttacatatattnnnnnnntagataatattgtacctaaaaatgtattagataatgtgctt |
217 |
Q |
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| T |
3611613 |
ttaccacatgtgtaccttattttaatctcttttcatcatttttacatatattaaaaaaatagataatgttgtacctaaaaatatattagataatgtgttt |
3611712 |
T |
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| Q |
218 |
tatgtgacaattttatgtatggatattcct |
247 |
Q |
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| T |
3611713 |
tatgtgacaattttatgtatggatattcct |
3611742 |
T |
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